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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM900838; SV 1; linear; genomic DNA; STD; ROD; 1048 BP.
XX
AC   AM900838;
XX
DT   20-DEC-2007 (Rel. 94, Created)
DT   20-DEC-2007 (Rel. 94, Last updated, Version 1)
XX
DE   Oryzomys macconnelli partial chgut gene for chondroitin sulfate
DE   glucuronyltransferase, tissue library T-4973
XX
KW   chgut gene; chondroitin sulfate glucuronyltransferase.
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OS   Euryoryzomys macconnelli (MacConnell's rice rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Cricetidae; Sigmodontinae; Euryoryzomys.
XX
RN   [1]
RP   1-1048
RA   Tilak M.K.;
RT   ;
RL   Submitted (15-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Tilak M.K., Institut des Sciences de l'Evolution, Universite Montpellier
RL   II, Place E Bataillon, 34095, FRANCE.
XX
RN   [2]
RA   Ranwez V., Delsuc F., Ranwez S., Belkir K., Tilak M.K., Douzery E.J.;
RT   "OrthoMaM: A database of orthologous genomic markers for placental mammal
RT   phylogenetics";
RL   BMC Evol. Biol. 7(1):241-241(2007).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1048
FT                   /organism="Euryoryzomys macconnelli"
FT                   /mol_type="genomic DNA"
FT                   /tissue_lib="T-4973"
FT                   /tissue_type="Viscerae"
FT                   /db_xref="taxon:48006"
FT   CDS             <1..>1048
FT                   /codon_start=3
FT                   /gene="chgut"
FT                   /product="chondroitin sulfate glucuronyltransferase"
FT                   /db_xref="GOA:A9HTE2"
FT                   /db_xref="InterPro:IPR008428"
FT                   /db_xref="UniProtKB/TrEMBL:A9HTE2"
FT                   /protein_id="CAP15775.1"
FT                   /translation="GEAGLSWPVGLPAPFTPHSRFEVLGWDYFTEQHTFACTDGAPKCP
FT                   LQGASRADVGDAVDTALEQLNRRYQPRLRFQKQRLLNGYRRFDPARGMEYTLDLLLEAV
FT                   TQRGHRRSLARRVSLLRPLSRVEILPMPYVTEATRVQLVLPLLVAEAPAALAFLEAFAA
FT                   SVLEPREHALLTLLLVYGPREGRGGXDPFLGVKAAAADLERRYPGARLAWLAVRAEAPS
FT                   QVRLMDVISKKHPVDTLFFLTTVWTRPGSEVLNRCRMNAISGWQAFFPVHFQEFNPVLS
FT                   PQRSPPGGPGAGPDPPSPGVDPSRGASVGGRFDRQASAEGCFYNADYLAARARLAGELA
FT                   GQEEEEAL"
XX
SQ   Sequence 1048 BP; 184 A; 322 C; 324 G; 215 T; 3 other;
     agggggaggc agggctgagc tggcctgttg ggctcccagc ccctttcact ccacattctc        60
     gcttcgaggt gctgggctgg gactacttca cagagcagca caccttcgcc tgtacagatg       120
     gggctcccaa atgcccactg cagggggcta gcagggcaga ygtaggcgac gctgtggaca       180
     ctgctctgga gcagctcaat cggcgctatc agccccgcct gcgcttccag aagcagcgac       240
     tgctcaatgg ctaccgccgc tttgaccctg cgaggggcat ggagtacacc ctcgatttgc       300
     ttctggaagc tgtgacccag cgagggcacc gacgctccct ggcccgaagg gtcagtctgc       360
     tgaggccrct gagcagggtg gaaatcctgc ctatgcccta tgtcactgaa gctacccggg       420
     tgcagctagt gttgccacta ctggtggctg aagctccggc tgccctggct tttcttgagg       480
     cctttgctgc cagtgtgttg gagcctcgag aacatgcatt gctcaccctg ttgttggtat       540
     acgggccccg ggaaggccgt gggggccytg acccatttct tggggtgaag gctgcagcag       600
     ctgacttaga acgaaggtac cctggggcga ggctggcctg gcttgctgtg cgagcagagg       660
     ccccttccca ggtgcgactc atggatgtca tctccaagaa acaccctgtg gacacactct       720
     tcttccttac caccgtgtgg acaagacccg ggtcagaagt cctcaaccgc tgccgcatga       780
     atgccatttc tggttggcaa gccttctttc cagtccactt tcaagagttc aaccctgtcc       840
     tgtcaccaca gagatccccc ccagggggcc ctggggctgg ccctgatccc ccatccccag       900
     gtgtggaccc ttcccggggg gcttcagtcg ggggcagatt tgaccggcag gcatcggcgg       960
     agggctgctt ctacaatgct gactacctgg cagcccgtgc ccggctggct ggtgaactgg      1020
     caggccagga agaggaggaa gccctgga                                         1048
//
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