EBI Dbfetch

ID   AM884177; SV 1; circular; genomic DNA; STD; PRO; 1038869 BP.
XX
AC   AM884177;
XX
DT   15-JAN-2008 (Rel. 94, Created)
DT   13-MAY-2009 (Rel. 100, Last updated, Version 3)
XX
DE   Chlamydia trachomatis L2b/UCH-1/proctitis complete genome
XX
KW   complete genome.
XX
OS   Chlamydia trachomatis L2b/UCH-1/proctitis
OC   Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia.
XX
RN   [1]
RP   1-1038869
RA   Thomson N.R.;
RT   ;
RL   Submitted (29-AUG-2007) to the EMBL/GenBank/DDBJ databases.
RL   Thomson N.R., Pathogen Sequencing Unit, The Wellcome Trust Sanger
RL   Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1101/gr.7020108
RX   PUBMED; 18032721.
RA   Thomson N.R., Holden M.T., Carder C., Lennard N., Lockey S.J., Marsh P.,
RA   Skipp P., O'Connor C.D., Goodhead I., Norbertzcak H., Harris B., Ormond D.,
RA   Rance R., Quail M.A., Parkhill J., Stephens R.S., Clarke I.N.;
RT   "Chlamydia trachomatis: genome sequence analysis of lymphogranuloma
RT   venereum isolates";
RL   Genome Res. 18(1):161-171(2008).
XX
DR   GOA; P0C8R5.
DR   GR; AM884177_GR.
DR   InterPro; IPR002724; Pyruvoyl-dep_arg_deCO2ase.
DR   SILVA-LSU; AM884177.
DR   SILVA-SSU; AM884177.
DR   Sample; ERS000077.
DR   UniProtKB/Swiss-Prot; P0C8R5; AAXB_CHLTB.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1038869
FT                   /organism="Chlamydia trachomatis L2b/UCH-1/proctitis"
FT                   /strain="UCH-1"
FT                   /serotype="L2"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:471473"
FT   CDS             1..1017
FT                   /transl_table=11
FT                   /gene="hemB"
FT                   /locus_tag="CTLon_0001"
FT                   /product="delta-aminolevulinic acid dehydratase"
FT                   /db_xref="GOA:B0BA87"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA87"
FT                   /protein_id="CAP06399.1"
FT                   /translation="MTRLPLLKRPRRNRKSAAVRSIIQETQLCSSDLIWPIFLKDGSGI
FT                   REEIESMPGVYRWSLDMVSKELERLCTIGLKAVILFPVIDANKKEQFGSYASHPYNIVC
FT                   KGIQAIKKSFPELCVISDIALDPFTTSGHDGIFHNNYVINDESVRVYGGIAVMHAEMGA
FT                   DIVAPSDMMDGRVKHIREQMDQMGFVNTGILSYSAKYASALYGPFRDALSSHLQSGDKR
FT                   TYQMDPANVQEALLECQLDEEEGADMVMIKPAGFYLDVIVKARENTHLPVVAYQVSGEF
FT                   SMIMAACLHGWLNKESVIKESLLAIKRAGATAIISYATPWVLEWLAKDALPFERSVL"
FT   misc_feature    733..771
FT                   /note="PS00169 Delta-aminolevulinic acid dehydratase active
FT                   site."
FT                   /inference="protein motif:Prosite:PS00169"
FT   CDS             complement(1043..2440)
FT                   /transl_table=11
FT                   /gene="nqrA"
FT                   /locus_tag="CTLon_0002"
FT                   /product="Na(+)-translocating NADH-quinone reductase
FT                   subunit A"
FT                   /db_xref="GOA:B0BA88"
FT                   /db_xref="InterPro:IPR008703"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BA88"
FT                   /protein_id="CAP06400.1"
FT                   /translation="MKIVVSRGLDLSLKGAPKESGFCGKVDPTYVSVDLRPFAPLPLEV
FT                   KVTPGDQVTAGSPLAEYKLFSGVFITSPVDGEVVEIRRGNKRALLEIVIKKKPGISQTK
FT                   FSYDLQSLTQKDLLEVFKKEGLFALFKQRPFDIPALPTQSPRDVFINLADNRPFTPSVE
FT                   KHLSLFSSKEDGYYIFVVGVQAIAKLFGLKPHIISTDRLTLPTQDLVSIAHLHTIDGPF
FT                   PSGSPSTHIHHIARIRNERDVVFTISFQEVLSIGHLFLKGFVLGQQIVALAGSALPPSQ
FT                   RKYLITAKGASFFDLLPKDIFSSDEITLISGDPLTGRLCKKEENPCLGMRDHTITLLPN
FT                   PKTRESFSFLRLGWNKLTVTRTYLSGFFKRKRVFMDMDTNMHGEKRPIIDAEIYERVSA
FT                   IPVPVALIIKALETQNFEEACRLGLLEVAPEDFALPTFIDPSKTEMFSIVKESLLRYAK
FT                   ENVVTSS"
FT   CDS             complement(2462..2896)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0003"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA89"
FT                   /protein_id="CAP06401.1"
FT                   /translation="MKNNSAQKIIDSIKQILSIYKIDFDPSFGATLTDDNDLDYQMLIE
FT                   KTQEKIQELDKRSQEILQQTGMTREQMEVFANNPDNFSPEEWRALENIRSSCNEYKKET
FT                   EELIKEVTNDIGHSSHKSPTPKKTKSSSQKKSKKKNWIPL"
FT   CDS             3010..5157
FT                   /transl_table=11
FT                   /gene="greA"
FT                   /locus_tag="CTLon_0004"
FT                   /product="Transcription elongation factor"
FT                   /db_xref="GOA:B0BA90"
FT                   /db_xref="InterPro:IPR018151"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA90"
FT                   /protein_id="CAP06402.1"
FT                   /translation="MDYLEKLQSLIENHPSDFFSLWEEYCFNDVVKGDELVVLLEKIKG
FT                   STIAPAFGKIAESVIPLWEQLPEGEEKDKVLSLVFDVQTTNSKNLLEIALQQVKKYEDS
FT                   ANYKEALRIVGLRDGITFSHCLGRFALLMHLSEGNFVFHQGGWGVGEIMGVSFLQQKVL
FT                   VEFEGVLTAKDISFETAFRMLVPLRKDHFLARRFGDPDAFEAFARKEPVAAIECLLKDL
FT                   GPKNAKEIRNELVELVIPEEDWSRWWQSAKIKMKKDARILAPASSKDPYVFDPKGFSFV
FT                   SQLQASLSGSNDANKKITSCYAFVRDLGSELKDESNRQSVIKELKALDLPADSALLIQR
FT                   AMLLSEFLGEKAPELEYENIAKLSEDQLFDIVNNIEILSLQKSFLALIHSCSPVWVPVY
FT                   TKLFLTTSTSMLREQVFKVLNADKEARENILKKVFAMIEQPLLYPELFVWLFARVVDGE
FT                   DGLFAESDKKEIERQMLASALELMHKVATTPQKDLGKKLYSFLVGQRFLVIRQIIDQAS
FT                   IEYLKEFVLLSSKCPQFTQGDLGVLRSLAEVVQPALKRGTLEEEENILWTTSDSFTRMK
FT                   NKLQSLVGKEMVENAKEIEDARALGDLRENSEYKFASERRARLQEEIRVLSEEINRAKI
FT                   LTKDAVFTDSVGVGCKVVLESDQGDKVCYTILGPWDANPDEKILSLKSKLAQEMVGKAV
FT                   GETVLFQGKKHKIKEISSIWD"
FT   tRNA            complement(5166..5238)
FT                   /gene="tRNA-Ala"
FT                   /product="transfer RNA-Ala"
FT                   /anticodon=(pos:5203..5205,aa:Ala)
FT                   /note="tRNA Ala anticodon GGC, Cove score 66.87"
FT   CDS             5345..6547
FT                   /transl_table=11
FT                   /gene="aspC"
FT                   /locus_tag="CTLon_0005"
FT                   /product="Aspartate aminotransferase"
FT                   /db_xref="GOA:B0BA91"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA91"
FT                   /protein_id="CAP06403.1"
FT                   /translation="MSLFEQLPSFSPDSILGLAQAFQEDPREDKINLLLGTYEREKKRY
FT                   GGFSSVRKAQSVFFDDEKDKNYLPIKGSSTFLEEMAALCFGEVDANRWVGVQAIGGTGA
FT                   LHLGASVYANASLAGKVYIPSQTWGNHSRIFSHQGLALEYYPYYDQETKELDLQGLKAV
FT                   LRSAPETSLVLLHCCCHNPTGKDIPLSEWPEIITIIKERDLIPFFDMAYLGFASGIEED
FT                   RRPVQLCIEAGVTTFVAGSASKNFSLYGSRVGFFGAIHQDKQDLNRILSFLEEQIRGEY
FT                   SSPAREGVAIVTSILSNPYLRQEWELELNGIRQSLEEIRSSFVIAMRNVAGHSFDFIAS
FT                   QKGFFGYPGFSKEQVLFLREELGIYTTAGGRFNLNGITDKNINRVTHGFAQAYEYPRSV
FT                   S"
FT   misc_feature    6065..6106
FT                   /note="PS00105 Aminotransferases class-I
FT                   pyridoxal-phosphate attachment site."
FT                   /inference="protein motif:Prosite:PS00105"
FT   CDS             6522..7532
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0006"
FT                   /product="exported protein"
FT                   /note="Note the PFAM domain PF04085 MreC (murein formation
FT                   C) which is involved in the rod shape determination in E.
FT                   coli."
FT                   /db_xref="GOA:B0BA92"
FT                   /db_xref="InterPro:IPR007221"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA92"
FT                   /protein_id="CAP06404.1"
FT                   /translation="MNTLGPYHKRVRFITYLFVAFGIIVSWNLPRSAYESIQDTFVRVC
FT                   SKFLPFRQGSDSQALVEETQCFLLKEKIRLLEERILSMEEAKQSPPLFSEILSSYFQSP
FT                   IMGRVIFRDPAHWGSSCWINIGKRQGVKKNSPVVCGKVVVGLVDFVGEAQSRVRFITDV
FT                   GIKPSVMAVRGEIQTWVVKDQLRTLARNVANLPASAFADSDKQEALHLLQALEDSLSLS
FT                   EQNDFALRGIVCGRGDPIWKPEASILSGSDFGFVDGKTIEVGDVLVTTGLDGVFPPGLL
FT                   VATVNEVLPKSEGSCSLKIKAQSLAPDCSTVDFLVLPPMDFNPNDRPDIFGLIWE"
FT   sig_peptide     6522..6620
FT                   /locus_tag="CTLon_0006"
FT                   /note="Signal peptide predicted for CTL0006 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.668) with cleavage site
FT                   probability 0.645 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    6558..6611
FT                   /note="1 probable transmembrane helix predicted for CTL0006
FT                   by TMHMM2.0 at aa 13-30"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(7548..10628)
FT                   /transl_table=11
FT                   /gene="recB"
FT                   /locus_tag="CTLon_0007"
FT                   /product="exodeoxyribonuclease V beta chain"
FT                   /db_xref="GOA:B0BA93"
FT                   /db_xref="InterPro:IPR014016"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA93"
FT                   /protein_id="CAP06405.1"
FT                   /translation="MSSFDIFSPTASVSGKFFLEASAGTGKTFTIEQVILRSLLEGSIE
FT                   QTKNILVVTFTNAATNELKLRIQASLKQALSLFSQALSHPGTPLPPYISSSETKVKQLY
FT                   MKIRNSLATLDEMNIFTIHGFCRFTLEQHFPWIQPIQPSSIFSEPQTIQQYILDYLRKN
FT                   LWDTVLSPKQYAFLSYHHRATTQQTRHLIERLLQDYTSTPNLALSPLSITLQKLKAWVS
FT                   CYQHLAPLSLEEMQAFSLRFKQSDLSIERELPAFVQQFETNPYSLDMLFFPGMVQKFQE
FT                   ENRNKKKLSAPASPLDPFFQDWIQLAHPFCQKEPIFHTLLKSVQQHLKTHCAQSYSHDE
FT                   SIATLESLLDHNDTVVSQLRKQFQLVLIDEFQDTDKRQWQIFSKLFASPDYSGSLFLIG
FT                   DPKQSIYEWRNADLPTYLQAKHSFPKEAQLILDTNYRSTPELMQGLNHLFSLPTPFLET
FT                   PQNILYHPLHSKGSSEISYSEFSPIHFFSSEDIQEETLWISKTASYLRSAYSIPFGNMA
FT                   VLVQDYPQALKLITHSTIPMAYCKEKRIFDRTESPYLLILLLEALLYPENQQKIQAILM
FT                   SRLFQLSSTEIHQHLKTFSSLFFTLNRHLYHYSLLATFYKLMGENVLSQTIGETLLQTP
FT                   LGDIIFQELEALCLYLDKTTENPHHKLLHLINILITGKYDEELSFSSQSNDENMIKITT
FT                   VHSSKGLEYDVVFCSCLNKAKEKTPSVHMREMYVACTRAKKFLFIPFSPIEKRSLSTKK
FT                   LSALANYANVTKHHSVPHLVETLTSSSPELFSSSFQPPESSLTPDRERLPQQTYFSLPH
FT                   LPSRTIHSFSSTVENLHFSEPIQELSPSLLFPGGSLTGTLIHKLLESLAGNFAACFEEI
FT                   FNKAQTLLKNTPLEGYESIIAEKIYTVFSTTLPFSSGSFALRNIHPHNIRVEETFLLQE
FT                   EGELWQGIVDLFFEHKGRFFIIDWKTSFLGDETSCYSPDQLHLYIQRQGLDRQERLYRK
FT                   AAKRFLHQFNSSLQVEMAFVFIRGLDDKGNGFLQPGR"
FT   misc_feature    complement(10545..10568)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             complement(10630..13650)
FT                   /transl_table=11
FT                   /gene="recC"
FT                   /locus_tag="CTLon_0008"
FT                   /product="exodeoxyribonuclease V gamma chain"
FT                   /db_xref="GOA:B0BA94"
FT                   /db_xref="InterPro:IPR006697"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA94"
FT                   /protein_id="CAP06406.1"
FT                   /translation="MNELSHSQATFSNYPEVLLAKLAQDLFSINQTPMTKRWILVPSSD
FT                   TDHWLRRELVKASSNHIFMGTHIFASFDAFVKYLFTGTRLVDLSTPDHITLPLTIYNLL
FT                   KESSFNSSSEVSYSHLQKLSSIFKKFYTFSQEPSTNNPYYKNLFAQLKDSYTPLETIFS
FT                   SILDHPPEYPCSLHIFGYPQLPQHVASFFVALGKYFPVHFYCFSPSAAYFGDLLSDKAM
FT                   AALSPRIPEPHQETWEKYVLTDRLALLANLAHKSQSLQNFFLDYSVPYEELFQPYEKLS
FT                   SLHIVKDSFFHLQPIDQKLFSNSPQTIFVRQAPSASREVHQLFSLVSQLLHSGVPAQEI
FT                   FILSSNLSKYETLLRGIFEPHLPLYLTKTEKTQTRTLKNKLLLVVTFLFSKGSLNDLLR
FT                   ILSHPDLLSPLETTKMGFLTHKLTHYWKSLSQKDSPLTQLIHRILDEYPFIDDTGSVNE
FT                   AETWEVVVPLLHTLQQVTASYIESKDKTYEEHSRLIFSALENIFFLSTEEYALLVSLSK
FT                   TLQPFVRSSCSLTIFIEFCLDFLSHIPGHSQLYNQPGPFVGSLNSLSLIPKGYTFILGA
FT                   NKKDHSLDTSFLIDPSLIQEDFLFSSTEDEDNLHFLQTIVSTKHQLHISYLSSSKNPAL
FT                   PSSALKHLLDAVPIQEEHLSGKLYAKENFSSEPLHQSYQVYYRMAQVSPLQNKAPSLFK
FT                   SDTTKTLPSHLSLQHLIKAFKDPLNFFLSTQHGFSFHPKALFSKSEKVFPSPHDAKAFW
FT                   NHLLSSKTPLPTTNYLSAFTESLYTDVQDSVSKRLETLQKDPATTPFSVVFSDQLFHDP
FT                   LHPNDQQVPPLLLSLPLKNIHLQGTIHGVCSKGVYLFSMHPGEAFKKTQKTHGFPKDAF
FT                   ELESYLESYLSLALLQASHLLPKEATILRVTPHDIEPILPPFSSPESYLIRAIHLYDLL
FT                   QNQAVPLPSAQAWEYIKKTDSASQCIKKLLDSEEDPLTSSFWWFHNRDTEEICSELSND
FT                   VLSQLLSLFINQDSQQN"
FT   CDS             13663..15342
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0009"
FT                   /product="putative membrane efflux protein"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA95"
FT                   /protein_id="CAP06407.1"
FT                   /translation="MGIIARKRSFRALVVTHFLTIINDNLYKFLLVFSLLEGKTLEENA
FT                   KILSLVSFFFALPYILLAPFSGSLADRFQKRNIILFTRVIEIFCAILGVYFFHIHSVVG
FT                   GYFVLVLMACHSAIFGPAKMGILPEMLPIEELSKANGAMTAATYSGSILGSCLAPLMVD
FT                   LTKDFVTNSYELSACFCVVSSVLSLFIALGIRASNVKNKGQKIAYVSFRNLWQVFQETR
FT                   NIAYLMISVFLVAFFLFVGAYVQLQIIPFVEFTLGYSKHYGAYLFPIVAVGMGVGSYMA
FT                   GWISGKDIKLGFSPLAAIGVGLSMMVLCLLSFSITAVLILLFCLGLVGGIYQVPLHAYI
FT                   QFVSPEHKRGQVLALNNFLDFSGVLLAAGFVRLLGAGLRLTPDQSFLYMGSLVVCFAIL
FT                   SLWMLKEHVYRLLLTRVLKRQLGTSFSSPKAEEVWCFFVPATSYKETRRILALFPKTVR
FT                   SCVFILDKALQPGWTSYLIPHCVPTIFSYGVEGQAFAQWIDRQVVEVKALLKRQPSLGV
FT                   VCLGNQAQSQFFFSQLQASGLAVQSGTLVQDSELKYSLHLAN"
FT   misc_feature    order(13699..13767,13804..13872,13891..13959,13975..14043,
FT                   14080..14148,14176..14244,14341..14409,14452..14520,
FT                   14533..14601,14614..14682,14719..14787,14815..14874)
FT                   /note="12 probable transmembrane helices predicted for
FT                   CTL0009 by TMHMM2.0 at aa 13-35, 48-70,
FT                   77-99,105-127,140-162, 172-194, 227-249, 264-286,
FT                   291-313,318-340,353-375 and 385-404"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(15362..16177)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0010"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA96"
FT                   /protein_id="CAP06408.1"
FT                   /translation="MRAALNTLEFLSSPPSSDPYDDLLQLNKEGFLAGPEEEKQAFFLR
FT                   VERTLAEAPVHPTPFPIEFQKLFDVNPSFLEVVYSNESLDAWEAGCTWITDNRVSIQLR
FT                   KGFQKASFWFGFFSKEEVLSHEAVHAVRMKFYEPIFEEVLAYSTSKHFWRRFFGPLFRS
FT                   AGETHFFLFFVLFGAFLFPWFPWIGLSCILAPNMFFFFRLFRTQILFRKAKKKIRKLLG
FT                   IEPLWVLLRLTDREIRLFATQPLAVIEDFARKEKLKSVRWRQIYQSYFT"
FT   misc_feature    complement(15566..15634)
FT                   /note="1 probable transmembrane helix predicted for CTL0010
FT                   by TMHMM2.0 at aa 182-204"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             17070..19643
FT                   /transl_table=11
FT                   /gene="topA"
FT                   /locus_tag="CTLon_0011"
FT                   /product="DNA topoisomerase I"
FT                   /db_xref="GOA:B0BA97"
FT                   /db_xref="InterPro:IPR006154"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA97"
FT                   /protein_id="CAP06409.1"
FT                   /translation="MKKSLIIVESPAKIKTLRKLLGEGFIFDSSLGHIVDLPAKGFGID
FT                   IENGFVPDYQILEGKEEVIRKICAEAKKCDVVYLAPDPDREGEAIAWHIANQLPKDTKI
FT                   QRISFNAITKGAVTEALKHPREIDMALVNAQQARRFLDRIVGYKISPILGRKLQRWSGV
FT                   SAGRVQSVALKLVVDREYAIERFVPVEFWNIRVHLKDPQTQKTFWAHLHSVNGKKWEKE
FT                   IPEGKTSDEVILIDSKEKADEIVALLESATYVVDRVESKEKKRHAYPPFITSTLQQEAS
FT                   RHYRFSSSRTMNIAQTLYEGVDLDSQGAVGLITYMRTDSVRTDPEAVKQVRKYIEGHFG
FT                   KEFVPSSPNVYATKKMAQDAHEAIRPTDVTITPESIRSKLTEDQYKLYSLIWKRFVASQ
FT                   MISAIYDTLAIRITTNKGIDLRATGSCLKFKGFLAVYEEKRDEEGDEEENIHLPKLNER
FT                   DVLTKEELEAEQSHTKPFPRFTEASLVKELEKSGIGRPSTYATIMNKIQSREYTLKEGQ
FT                   RLRPTELGKVVCQFLETNFPRIMDIGFTAGMEDELELIADNKKPWKQLLQEFCELFLPF
FT                   VVTAEKEAFIPRIVTEIDCPKCHKGKLVKIWAKNRYFFGCSEYPTCDYKTSEEELTFDK
FT                   NEYAEDTPWDAPCALCGGEMKVRHGKFGSFLGCENYPKCHYIVNLFKKGEAGAEPEATV
FT                   HCPAEGCTGHLVKRRSRFNKMFYSCSEYPACSVIGNSVDAVIEKYAGTPKTPYEKKPKA
FT                   KKSIASTKGKAAKTVKKSSATTKKRATKAYTPSAALAAVIGADPVGRPEATKKLWEYIK
FT                   EKGLQSPQNKKIIIPDSKLQGVIGADPIDMFALSKKLSAHLIKEE"
FT   misc_feature    17955..18026
FT                   /note="PS00396 Prokaryotic DNA topoisomerase I active
FT                   site."
FT                   /inference="protein motif:Prosite:PS00396"
FT   CDS             complement(19673..20677)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0012"
FT                   /product="putative oxidoreductase"
FT                   /db_xref="GOA:B0BA98"
FT                   /db_xref="InterPro:IPR018517"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA98"
FT                   /protein_id="CAP06410.1"
FT                   /translation="MAPSIFIKNLPLKSPVVYAPLAGFSDFPYRRMSAEYRPALMFCEM
FT                   VKMEGLHYCPQRTLRLLDFAESMRPIGGQLCGSRPDLAGESAKILEGLGFDLIDLNCGC
FT                   PTDRITKDGSGSGMLKTPELIGKVVEKMVEVVSVPVTVKIRSGWDFDHINVEETVRIIK
FT                   ESGASAVFVHGRTRSQGYQGPSNLEFISRAKQAAGDDFPVFGNGDVFSPEAAKTMLETT
FT                   HCDGVLVARGTMGAPWIGKQIEDYLTTGTYSSPSFSTRKQAFVQHLQWIEEYYQSEEKL
FT                   LTDTRKLCGHYLILSPKVRSLRANLAKASSSQEVYQLIDGFEELTEEEELLSE"
FT   misc_feature    complement(20330..20386)
FT                   /note="PS01136 Uncharacterized protein family UPF0034
FT                   signature."
FT                   /inference="protein motif:Prosite:PS01136"
FT   CDS             complement(20656..20952)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0013"
FT                   /product="integral membrane protein"
FT                   /db_xref="GOA:B0BA99"
FT                   /db_xref="InterPro:IPR003425"
FT                   /db_xref="UniProtKB/TrEMBL:B0BA99"
FT                   /protein_id="CAP06411.1"
FT                   /translation="MLSYLLRTAVNIYSFLILVYVLCSWLPECHNTQWYRIIRRWVSPY
FT                   LRIFHKFVPRIGFIDISPMIALLCLGVLPFMILKIVRFIVLNIFQSPWLLQYL"
FT   misc_feature    complement(order(20695..20763,20875..20943))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CTL0013 by TMHMM2.0 at aa 4-26 and 64-86"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             21057..22436
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0014"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA0"
FT                   /protein_id="CAP06412.1"
FT                   /translation="MDFKLPIYCIGVTQSAENVTRIAILQKTCKGWSLCRCEKLTETGA
FT                   LSWPKRFLSSKVVLSLQGQETLVKSVSSSLKSKKNFLKMVYAEQEATAAFPLKDLVIAH
FT                   DLGEWNSAQERVVTLWMLQRQSVALATALLEEKGGFATHISCRAKDLFSALQQSLLRNL
FT                   ATYFFVYEGLDETVCLFVQEGSVLLSRSFKNDSGSLLDDLLASFAYVQEVYTASLSEIH
FT                   GAYLSSSLRTLLSRRAGVPVIISLLFSELSPDQEVYRDAVAAAFQGVRSCHTCFSYSWG
FT                   DFSRKACSYWIKKRLWSLSKLAFASALAIFIGGGVESLLLVHKAQQIFREIAPEKEITR
FT                   VFRSAQQVVKEVCDSDHSWEYEYLPTVPTNQEVMEVLGRMTANLPSVSFSHYLYKLEDI
FT                   PSEERPLGGYRAYISLQGAANDEDFASFIDQLSAWIGARVLSKKLADRQFDVRIALQGR
FT                   G"
FT   CDS             22436..23014
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0015"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA1"
FT                   /protein_id="CAP06413.1"
FT                   /translation="MRRLGVWVLLLLASGAASLPAIGAWCWRQRTAEAWENLLIDMRDF
FT                   QSKRERSSQVAIKNARLKAAHKQASFPNWIAQGENLVFLNKERDALAKLPATAWVVRSR
FT                   AVKDRKAFLEDNRLSWQEQTLGEKSTLFSFQKELQIDDEDIPVLLGLFDPKYTQIPIVF
FT                   LSYWEMTKQVSSLGNEVWVVHAEAWGRCV"
FT   sig_peptide     22436..22504
FT                   /locus_tag="CTLon_0015"
FT                   /note="Signal peptide predicted for CTL0015 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.999) with cleavage site
FT                   probability 0.828 between residues 23 and 24"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    22448..22516
FT                   /note="1 probable transmembrane helix predicted for CTL0015
FT                   by TMHMM2.0 at aa 5-27"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             23005..24279
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0016"
FT                   /product="putative membrane protein"
FT                   /db_xref="InterPro:IPR011652"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA2"
FT                   /protein_id="CAP06414.1"
FT                   /translation="MCVSRSLRWCLCFLLLCGWVDAGVYDKLRLTGINIIDRNGLSETI
FT                   CSKEKLQKYTKIDFLSPQPYQKVMRTYKNAAGESVACLTTYYPNGQIRQYLECLNNRAF
FT                   GRYREWHSNGKIHIQAEVIGGIADLHPSAEAGWLFDGTTYAHDSEGRLEAVIHYEKGLL
FT                   EGISLYYHANGNVWKECPYHKGVAHGDFLVFTEEGSLLKKQTFCKGQLSGCALRYEPGS
FT                   QSLLSEEEYKQGKLRSGKYYDPLTKEEIACVVNGKGKQVIYGKYAIIETRQIVHGVPHG
FT                   EVLLFDEHGKSLLQAYSLINGQKEGEEVFFYPGGEGRKMLLTWSQGILQGAVKTWYPNG
FT                   ALESSKELVQNKKTGILMLYYPEGQVMATEEYVDDLLIKGEYFRPNDRYPYAKVEKGSG
FT                   TAVFFSATGGLLKKVLYEDGKPIIH"
FT   CDS             24282..24818
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0017"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to many proposed 5-formyltetrahydrofolate
FT                   cyclo-ligase"
FT                   /db_xref="GOA:B0BAA3"
FT                   /db_xref="InterPro:IPR002698"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA3"
FT                   /protein_id="CAP06415.1"
FT                   /translation="MKNIVEQKRCLRREGLAKREQLSVQRRDEAARELMHFVMQTIPQG
FT                   FVLSYIPFRSELDVRGINAWLAQENRLLLPKMQGMDIVPIALPFTKIESLYSPKDLNQI
FT                   EGEEIEAQQIAAALIPAIVFDQNKFRLGYGGGYYDRFLSKYPYIWTIGVGFKEQLLAYL
FT                   PREEHDVPLDQLYLT"
FT   CDS             25078..26136
FT                   /transl_table=11
FT                   /gene="recA"
FT                   /locus_tag="CTLon_0018"
FT                   /product="recombinase A"
FT                   /db_xref="GOA:B0BAA4"
FT                   /db_xref="InterPro:IPR001553"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAA4"
FT                   /protein_id="CAP06416.1"
FT                   /translation="MSVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGA
FT                   LSLDLALGIGGVPKGRIVEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPNY
FT                   AALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEIGDV
FT                   HVGLQARMMSQALRKLTATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSI
FT                   RIDIRRIGSIKGGENFDIGNRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAV
FT                   EKNIIDKKGSWFNYQDRKLGQGREAVREELKRNKELFHELERRIYESVQASQAPAAACV
FT                   DSESREVAEAAK"
FT   misc_feature    25276..25299
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    25720..25746
FT                   /note="PS00321 recA signature."
FT                   /inference="protein motif:Prosite:PS00321"
FT   CDS             26422..28248
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0019"
FT                   /product="putative exported lipoprotein"
FT                   /db_xref="InterPro:IPR010764"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA5"
FT                   /protein_id="CAP06417.1"
FT                   /translation="MVRVFLLVVFLLSCFSAGGRSYVFFSSRDDSPSHYDHTHRTVARL
FT                   REGSTLSEGLSMEQEQMYLLCCQGFSLQIQRKFQESKEIFSRIDKRKTSAPFVLQRELL
FT                   EGRILNAYFLNNLSLMAECIAELERVSGSEAHLVFFKALHAHRTKQYNLAVDVLSRWFG
FT                   HVDQTKPLCLDTNVYELFSPYVLEEIAAESLIGARRYAEGRIVINSIFNKIFSREYAWS
FT                   VDMYNRLVLMLGQSYLLELQEGVRSDLLPEYYETILFYQKQMKGFDAGAYKTFFPESML
FT                   VPTIMQHIFVIPETQLPLFMDALLMWENSYVHPDYSLVLERMKPAVLQDGIHTQKICQA
FT                   IADSKIKKLKEKLIELFSDELVFCVSQGNTVCADQYLALLKTLDPRSSWGHKLLLSEKE
FT                   IVNMVCEDDAQYSRLKDYLLLWEEQDIADVDRQQLVHYLFFSAKHLWRGGQEEACLRLL
FT                   KEILLFSQNEKACLNRTLRLVKHFYTQALAMRNFTHLVWIENFLDEVGLPKTLASDAEI
FT                   ANCLADAQYLFSKGDYRLCIVYSSWLARVAPSTEALQLLGLSLVEQKEYTEALEVFQKL
FT                   PLGEDAWNSQVHKASLLCYKYIARQQKEKSFP"
FT   sig_peptide     26422..26478
FT                   /locus_tag="CTLon_0019"
FT                   /note="Signal peptide predicted for CTL0019 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.978) with cleavage site
FT                   probability 0.703 between residues 19 and 20"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    26431..26463
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   CDS             28245..29735
FT                   /transl_table=11
FT                   /gene="recD"
FT                   /locus_tag="CTLon_0020"
FT                   /product="exodeoxyribonuclease V alpha chain"
FT                   /db_xref="GOA:B0BAA6"
FT                   /db_xref="InterPro:IPR006344"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA6"
FT                   /protein_id="CAP06418.1"
FT                   /translation="MNVNQHVQDIVPSLLAQHILLPFDIAFAQKHLSQEEFSQEAEAFL
FT                   ATASALLRCGYPYFSICDETIHPTLPGISNKQLFQWFQLLSSRIKEELFEVVNHKIYLR
FT                   SLFLLREKVFHKLHRLAGAVPRTPLIFEEIALLSEEQNQVLKTVLNSCFSLVCGGPGTG
FT                   KTFLAVQMIRLILAQIPSAQIMVASPTGKASAHLHSVLTSQGIVGDSVEVVTIHKFLKD
FT                   MRRGRSPVDLLLVDEGSMVTMNLLHGLIKTIRGESRGETIYADRMVIFGDANQLSPIGI
FT                   GVGNPFHEVVSEFSKQACFLSTSHRAKHKELQELASAVLRKELIPFQPLPSRQEAIRRL
FT                   SFAFTQAAKEGVSLCALTPMRQGLWGFLQLNRLLFNEMQEKHPRAPIPIIVTERYETWG
FT                   LTNGDTGVLDPVTEQLRFMNGEILHQADFPYYSYNYVMSVHKSQGSEYDRVIVILPKGS
FT                   EVFDSAILYTAITRTKQHVEIWADREALEAIILKRGRY"
FT   misc_feature    28716..28739
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             29801..29980
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0021"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA7"
FT                   /protein_id="CAP06419.1"
FT                   /translation="MDQLSQIHQELARLEFINDQLQSERAYIHDLLCAIGFPEGLKTIA
FT                   AIANEVLSEEDSQG"
FT   CDS             complement(30081..30800)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0022"
FT                   /product="ABC transporter ATP-binding protein"
FT                   /db_xref="GOA:B0BAA8"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA8"
FT                   /protein_id="CAP06420.1"
FT                   /translation="MSVLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTA
FT                   FYQTVGLIRPDSGKILFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLE
FT                   IIYKTRKEQTHLLNALIDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEP
FT                   FANVDPLVIQNVKYLIKILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQ
FT                   MIANPMVRQHYLGDSFS"
FT   misc_feature    complement(30348..30392)
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:Prosite:PS00211"
FT   misc_feature    complement(30672..30695)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             complement(30809..31297)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0023"
FT                   /product="putative exported protein"
FT                   /db_xref="InterPro:IPR010564"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAA9"
FT                   /protein_id="CAP06421.1"
FT                   /translation="MTKFLFHGIWCVVVLILCACVTALAVVKMGDFTNPTLVHQDSVTP
FT                   APPFLKIKKLGVRKRIISPEKQLFYCTIDKSCMELHFSNTSLHCRELLSHLTGCLQTET
FT                   TERAMFFRGTGGLLNYKDYSLSVYNCCFSINTPDAEPEMGRGMAEGGMKVLSLSLLKN"
FT   misc_feature    complement(31217..31285)
FT                   /note="1 probable transmembrane helix predicted for CTL0023
FT                   by TMHMM2.0 at aa 5-27"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(31223..31297)
FT                   /locus_tag="CTLon_0023"
FT                   /note="Signal peptide predicted for CTL0023 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.996) with cleavage site
FT                   probability 0.935 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    complement(31238..31270)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   CDS             complement(31294..32103)
FT                   /transl_table=11
FT                   /gene="kdsA"
FT                   /locus_tag="CTLon_0024"
FT                   /product="2-dehydro-3-deoxyphosphooctonate aldolase"
FT                   /db_xref="GOA:B0BAB0"
FT                   /db_xref="InterPro:IPR006269"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAB0"
FT                   /protein_id="CAP06422.1"
FT                   /translation="MFPENKMLLIAGPCVIEDNSVFETARRLKEIVAPYASSVHWIFKS
FT                   SYDKANRSSVHNYRGPGLRLGLQTLAKIKEELDVEILTDVHSPDEAREAAKVCDIIQVP
FT                   AFLCRQTDLLVTAGETQAIVNIKKGQFLSPWEMQGPIDKVLSTGNNKIILTERGCSFGY
FT                   NNLVSDMRSIEVLRRFGFPVVFDGTHSVQLPGALHSQSGGQTEFIPVLTRSAIAAGVQG
FT                   LFIETHPNPSSALSDAASMLSLKDLERLLPAWVQLFTYIQEMDAVSV"
FT   tRNA            32410..32482
FT                   /gene="tRNA-Arg"
FT                   /product="transfer RNA-Arg"
FT                   /anticodon=(pos:32443..32445,aa:Arg)
FT                   /note="tRNA Arg anticodon TCT, Cove score 86.53"
FT   CDS             32589..32882
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0025"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB1"
FT                   /protein_id="CAP06423.1"
FT                   /translation="MDTQFIASRSVRNQEVTSVSGKVKEELMSPSNMTFEGPVRSLDQL
FT                   RQALIAKMGEQKGQEMYDRFIQSLLISTFTTVHKEMDRAQRASKKMRSVYRD"
FT   CDS             32882..33199
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0026"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB2"
FT                   /protein_id="CAP06424.1"
FT                   /translation="MEIRYFLARPLLEEEVCRLANNRKNFLFDAEKYLIPICYKQTIYL
FT                   AKPLSRFPMTQEVWELHVQHVISLLKQQFGILTDHAPILLACEARQVVLLESLDSFVNI
FT                   S"
FT   CDS             33281..34288
FT                   /transl_table=11
FT                   /gene="sfhB"
FT                   /locus_tag="CTLon_0027"
FT                   /product="ribosomal large subunit pseudouridine synthase D"
FT                   /db_xref="GOA:B0BAB3"
FT                   /db_xref="InterPro:IPR006225"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB3"
FT                   /protein_id="CAP06425.1"
FT                   /translation="MILEIPAPTAVFSFVIDEQLTGRLDKGLVSYNGAYSRAFYQQQIE
FT                   LGRVRVNGRVYTRVSHPLSLGDVVEVELIEEEEPSSLIPEDIPLDKVYEDDMILVINKP
FT                   RDMVVHPAPGHTQGTVVHALLHEIGERLKQEFPEEPWRPGIVHRLDKDTSGLLITVKTR
FT                   RAKALYSELFATKQVKKLYVAICINAPSQELIHTRITRHPLKRKEMTVLSTHAEGGKEA
FT                   ITHCHVLATNGRLSVVALYPETGRTHQLRVHMKHLGTPILGDPVYGIPSINFRYGLDKQ
FT                   QLHAYSLVFAHPESAERVKLVTKLPDDMTSLIEKEFREGVSILDGSCDWFKITR"
FT   CDS             34388..34624
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0028"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:B0BAB4"
FT                   /db_xref="InterPro:IPR018111"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB4"
FT                   /protein_id="CAP06426.1"
FT                   /translation="MKEFLAYIVKNLVDKPEEVHLKEVQGTNTIIYELTVAKGDIGKII
FT                   GKEGRTIKAIRTLLVSVASRDNVKVSLEIMEER"
FT   CDS             complement(34763..36235)
FT                   /transl_table=11
FT                   /gene="gyrA2"
FT                   /locus_tag="CTLon_0029"
FT                   /product="DNA gyrase subunit A"
FT                   /db_xref="GOA:B0BAB5"
FT                   /db_xref="InterPro:IPR013758"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB5"
FT                   /protein_id="CAP06427.1"
FT                   /translation="MSDLSDLFKTHFTQYASYVILERAIPHVLDGLKPVQRRLLWTLFR
FT                   MDDGKMHKVANIAGRTMALHPHGDAPIVEALVVLANKGFLIETQGNFGNPLTGDPHAAA
FT                   RYIEARLSPLAKEVLFNTDLMTFHDSYDGREQEPDILAAKIPLLLLHGVDGIAVGMTTK
FT                   IFPHNFCDLLEAQIAILNDQPFSLLPDFPSGGTMDASDYQDGLGSIVLRATIDIINDKT
FT                   LLIKEICPSTTTETLIRSIENAAKRGIIKIDSIQDFSTDLPHIEIKLPKGIHAKDLLRP
FT                   LYTHTECQVILTSRPTAIYQGKPWETTISEILRLQTETLQNYLKKELLILEDSLSRELY
FT                   HKTLECLFIKHKLYDTVRSMLSKRKTSPSSSAIHNAVLEALTPFLDTLPAPDKQATAQL
FT                   AALTIKKILCFDENSYEKELACLEKKRSSVQKDLSQLKKYTVLYIKKLLETYRQLGHRK
FT                   TKIAKFDDLPTERVSAHKKAKELAALDQEENF"
FT   CDS             complement(36250..38067)
FT                   /transl_table=11
FT                   /gene="gyrB"
FT                   /locus_tag="CTLon_0030"
FT                   /product="DNA gyrase subunit B"
FT                   /db_xref="GOA:B0BAB6"
FT                   /db_xref="InterPro:IPR014721"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB6"
FT                   /protein_id="CAP06428.1"
FT                   /translation="MRKKTAYSESSIISLASLDHIRLRAGMYIGRLGDGSQAEDGIYTL
FT                   FKEVVDNAIDEFVMGYGHTIHITGDAHELSIRDEGRGIPLGKVIDCVSKINTGAKYTQD
FT                   VFHFSVGLNGVGLKAVNALSQHFSVRSVRNKKFLKASFSKGILLHTEQGATQDPDGTEV
FT                   VFSPDHELFENFSFQVEFLKKKIRQYTYLHPGLTIIYNGERIVSTRGLLDLFEEEVQTP
FT                   LLYSPITFQYSDLAFLFSHTETSSEQYFSFVNGQETTDGGTHLVAFKEGIVKGVNEFFG
FT                   KNFSSQDIREGLAGCIAIKIASPIFESQTKNKLGNTNIRAELAKRVKEAVLSSLKKNPS
FT                   SAERIQEKIKLNEKTRKNAQFLKQELKDKQKKLHYKIPKLRDCKFHLTDNSLYGKNSSI
FT                   FITEGESASASILASRNPLTQAVFSLRGKPMNVFSSKEETIYKNDELFYLATALGLHKD
FT                   SLQNLRYNQVILATDADVDGMHIRNLMITFFLKTFLPLVASNHLFILETPLFKVRHKDA
FT                   TFYCYSEEEKLSTIEHIGKKESSLEITRFKGLGEISPKEFKSFIGADMRLTPVSLPDTE
FT                   TLDTLLQFYMGKNTKERKLFIIENLVTNL"
FT   CDS             38447..39454
FT                   /transl_table=11
FT                   /gene="hemA"
FT                   /locus_tag="CTLon_0031"
FT                   /product="glutamyl-tRNA reductase"
FT                   /db_xref="GOA:B0BAB7"
FT                   /db_xref="InterPro:IPR018214"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAB7"
FT                   /protein_id="CAP06429.1"
FT                   /translation="MVREGEERIGNRVLLGVIGVSYRETTLQQREQVLHILQQAQGSFR
FT                   PEVFQEERDYVLLATCHRVELYSVAPAELFDSLAQEIKLLGVSPYFYRNQDCFAHLFCV
FT                   AGGLDSLVLGETEIQGQVKRAYLQAAREQKLSFALHFLFQKALKEGKVFRAKGGAPYAA
FT                   ITIPILVDQELRRRQIDKKASLLFIGYSEINRSVAYHLRRQGFSCITFCSRQQLPTLSM
FT                   RQVVREELCFQDPYRVVFLGSLELQYALPHSLWESIWDIPDRIVFDFAVPRALPSHTVF
FT                   PHRYMDMDQISDWLREHRKEVNSAHLDSLREVAYRYWNSLNQRLERHDCVGANA"
FT   misc_feature    38498..38920
FT                   /note="HMMPfam hit to PF05201, Glutamyl-tRNAGlu
FT                   reductase,N-terminal domai, score 3.9e-54"
FT                   /inference="protein motif:HMMPfam:PF05201"
FT   CDS             40173..40574
FT                   /transl_table=11
FT                   /gene="sycE"
FT                   /locus_tag="CTLon_0032"
FT                   /product="Type III secretion system chaperone"
FT                   /db_xref="GOA:B0BAB8"
FT                   /db_xref="InterPro:IPR010261"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB8"
FT                   /protein_id="CAP06430.1"
FT                   /translation="MLEKLIKNFVAYMGVASELEFDADGSYVLPISSLVRMRVRQNADE
FT                   EIIISAFLGEIPAFMDIEKAYARMMEGNLFGQETGGAALGLDSDGHAVLVRRVPGEVSQ
FT                   EDFASYIESVLNYAEAWLEDLGLSKTEQE"
FT   misc_feature    40176..40538
FT                   /note="HMMPfam hit to PF05932, Tir chaperone protein
FT                   (CesT), score 8.1e-35"
FT                   /inference="protein motif:HMMPfam:PF05932"
FT   CDS             40578..43067
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0033"
FT                   /product="phosphopeptide binding protein (predicted to be a
FT                   TTSS protein)"
FT                   /db_xref="InterPro:IPR012843"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAB9"
FT                   /protein_id="CAP06431.1"
FT                   /translation="MGIRLVIDKGPLSGTVLILENGTSWSLGSDGKASDILLQDEKLAP
FT                   SQIRITLKDGEYYLENLDASRPVSVDGTVITAPVLLKDGVSFVMGSCQVSFFKGEEVEG
FT                   DIELSFQTEGGNEGEPAAQGSSSVSSEAPKKETGNPSLPSETKASGEVSSSAIAKEQEL
FT                   AASFLASVEKEPGTPKEVSEPKVSSQEGQTPSVTGEKKDLELPLASQEQPKQTTPSGSG
FT                   EPTQSQNASMEENRTSPDQNQQPQLSSASESGSQSPENQEQQPSQTPPPSPETPEPSGE
FT                   PNSATEENSPSPMEKASVTEEGSSGTSEEEKEGEEDTAESAANEELKAEASQEEEKKEE
FT                   DKAEVLAPFNVQDLFRFDQGIFPAEIEDLAQKQVAVDLTQPSRFLLKVLAGANIGAEFH
FT                   LDSGKTYIVGSDPQVADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVIVEGRKIE
FT                   HQSTLSANQVVALGTTLFLLVDYTAPSDTVMATISSEDYGLFGRPQSPEEIAARAAEEE
FT                   EEKRKRATLPTGAFILTLFIGGLALLFGIGTTSLFHTKEVVSIDQIDLIHDIEHVIQQF
FT                   PTVRFTFNKNNGQLFLIGHVRNSIDKSELLYKVDALSFVKSVDDNVIDDEAVWQEMNIL
FT                   LSKNPEFKGISMQSPEPGIFVISGYLKTEEQAACLADYLNLHFNYLSLLDNKVIIESQV
FT                   MKALAGHLVQSGFANVHVSFTNGEAVLTGYINNKDADKFRTVVQELQDIAGIRAVKNFV
FT                   VLLPAEEGVIDLNMRYPGRYRVTGFSKCGDISINVVVNGRILTRGDILDGMTVTSIQPH
FT                   CIFLEREGLKYKIEYNK"
FT   misc_feature    40650..40847
FT                   /note="HMMPfam hit to PF00498, FHA domain, score 6.6e-11"
FT                   /inference="protein motif:HMMPfam:PF00498"
FT   misc_feature    41793..41993
FT                   /note="HMMPfam hit to PF00498, FHA domain, score 9e-11"
FT                   /inference="protein motif:HMMPfam:PF00498"
FT   misc_feature    42165..42233
FT                   /note="1 probable transmembrane helix predicted for CTL0033
FT                   by TMHMM2.0 at aa 530-552"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    42648..42830
FT                   /note="HMMPfam hit to PF04972, Putative
FT                   phospholipid-binding domain, score 3.3e-10"
FT                   /inference="protein motif:HMMPfam:PF04972"
FT   CDS             43111..43362
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0034"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC0"
FT                   /protein_id="CAP06432.1"
FT                   /translation="MFNMENSAAKGEKAARQLFDLEQDMHDVAKAHEVNANVQSKVQTL
FT                   TSSLREGAFKESFEKQQTLLAGYVALQKVLGRINRKMV"
FT   CDS             43389..43640
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0035"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC1"
FT                   /protein_id="CAP06433.1"
FT                   /translation="MASGSCSAFNFNQMLDGVCKYVQGVQQYLTELETSTQGTVDLGTM
FT                   FNLQFRMQILSQYMESVSNILTAANTEMITMARAVKGS"
FT   CDS             43659..44108
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0036"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:B0BAC2"
FT                   /db_xref="InterPro:IPR013026"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC2"
FT                   /protein_id="CAP06434.1"
FT                   /translation="MADLDVFKEDFALLFEAGMVAIKQGDEASAKALFQALQVLDPEHT
FT                   AHELGSGLLHLHKMELTKAEVLFRAIVEKDPENWSAKAFLSLTLMMIVLQQGSSFEVRR
FT                   ESLERCLQLADQVLESCEVESTRALAKSVLDWHDGLVAKSGGPLN"
FT   misc_feature    43689..43790
FT                   /note="HMMPfam hit to PF07719, Tetratricopeptide
FT                   repeat,score 0.0037"
FT                   /inference="protein motif:HMMPfam:PF07719"
FT   CDS             44128..44799
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0037"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC3"
FT                   /protein_id="CAP06435.1"
FT                   /translation="MIDPLKLFPNFDGDKESAAVNKPSASPMPSELSKNVASFSLGGGG
FT                   AALDSTVSTEKLSLMAMMQDKNSQLIDPELEEALNSEELQEQIHLLKSRLWDAQTQMQM
FT                   QDPDKLASEHVDALGVIVDLINGDFQAIAEHTQQTVKQGNGDEEKSVTRKIVDWVSSGE
FT                   EILNRALLYFSDRNGERETLADFLKVQYAVQRATQRAELFASILGATVSSVKTIMTTQL
FT                   G"
FT   CDS             44801..46129
FT                   /transl_table=11
FT                   /gene="sctN"
FT                   /locus_tag="CTLon_0038"
FT                   /product="ATP synthase (predicted TTSS protein)"
FT                   /db_xref="GOA:B0BAC4"
FT                   /db_xref="InterPro:IPR020003"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC4"
FT                   /protein_id="CAP06436.1"
FT                   /translation="MEEITTEFNTLMTELPDVQLTAVVGRIIEVVGMLIKAVVPDVRVG
FT                   EVCLVKRHGMEPLVTEVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLG
FT                   RVLNGLGNPIDTETKGPLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAK
FT                   GQRIGIFAGAGVGKSSLLGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRS
FT                   VIVVSTSDQSSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEP
FT                   PARAGYTPSVFSTLPKLLERAGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIV
FT                   LSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYR
FT                   RGSDREVDFAIDHIDKLNRFLKQDIHEKTNYEEAAQQLRAIFR"
FT   misc_feature    44879..45073
FT                   /note="HMMPfam hit to PF02874, ATP synthase alpha/beta
FT                   family, beta-ba, score 9.6e-07"
FT                   /inference="protein motif:HMMPfam:PF02874"
FT   misc_feature    45248..45883
FT                   /note="HMMPfam hit to PF00006, ATP synthase alpha/beta
FT                   family, nucleot, score 9.1e-125"
FT                   /inference="protein motif:HMMPfam:PF00006"
FT   misc_feature    45311..45334
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    45854..45883
FT                   /note="PS00152 ATP synthase alpha and beta subunits
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00152"
FT   CDS             46152..46658
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0039"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR009929"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC5"
FT                   /protein_id="CAP06437.1"
FT                   /translation="MVRYPLEPVLSIKKDRVDRAEKVVKEKRRLLELEQEKLRERESER
FT                   DKVKNHYMQKIRQLREQLDDGTTSDAILKMKAYIKVVAIQLSEEEEKVNKQKENVLAAA
FT                   KELERAEVELTKRRKEEEKTRLHKEEWMKEALKEEARQEEKEQDEMGQLLHQLLKQKQR
FT                   ESGEN"
FT   CDS             46662..47513
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0040"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC6"
FT                   /protein_id="CAP06438.1"
FT                   /translation="MELNKTSESLFSAKIDHNHPRTEAHEPRDQREVRVFSLEGRSSTR
FT                   QEKADRMPGRTSSRQESSKSSEEGAVHESTAGVSSKEEEESKGDGFFTGGNPTSGMALV
FT                   ETPMAVVSEAMMETSTMTVSQVDLQWVEQLVTSTVESLLVADIDGKQLVEIVLDNSNTV
FT                   PAAFCGANLTLVQTGEEISVSFSNFVDQAQLTEATQLVQQNPKQLVSLVESLKARQLNL
FT                   TELVVGNVAVSLPTIEKIETPLHMIAATIRHHDQEGDQEGEGRQDQHQGQHQEKKVEEA
FT                   HI"
FT   CDS             47523..48644
FT                   /transl_table=11
FT                   /gene="sctQ"
FT                   /locus_tag="CTLon_0041"
FT                   /product="Type III secretion component, basal body"
FT                   /db_xref="GOA:B0BAC7"
FT                   /db_xref="InterPro:IPR001543"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC7"
FT                   /protein_id="CAP06439.1"
FT                   /translation="MAVAAEPSSNWLKARDELLSSLQEQKEGMFSFPVFPKQECEQKLK
FT                   DKFHMEEVELSFESRGLLSVAAAVQEYGERILLQPFLANPFESGEFYIVSSEEDLQALI
FT                   GTIFNDSSLASYFYEKDRLLGFHYYFVAEICKLLQESPWIPSMSVKVTGDVAFSARALE
FT                   GEYHVIQVSCCLDGSCIRFSILVPETTAQSACRFLEEKDQAFDMQKVDLQTPITLAVEV
FT                   GFCQISEEDWHQVVPGSFILLDACLYDPDTGDAGAFLSIQRTRFFGGRFLDKQSGSFKI
FT                   TGLQEMQPEEAPEEPSEGGPATPLPSATKIVAEVARYSLSVGEFLKLGPGSVLQFDGVH
FT                   PTLGVDIILNGAKVGRGNIIALQDVLGIRVLEV"
FT   misc_feature    48423..48641
FT                   /note="HMMPfam hit to PF01052, Surface presentation of
FT                   antigens (SPOA) prot, score 0.00025"
FT                   /inference="protein motif:HMMPfam:PF01052"
FT   CDS             48779..50251
FT                   /transl_table=11
FT                   /gene="pkn5"
FT                   /locus_tag="CTLon_0042"
FT                   /product="putative serine/threonine-protein kinase (TTSS
FT                   effector protein)"
FT                   /db_xref="GOA:B0BAC8"
FT                   /db_xref="InterPro:IPR017442"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC8"
FT                   /protein_id="CAP06440.1"
FT                   /translation="MLRSGVSFSSSKTNYLLTRELSRKVGLTVYQGVDEHSSRPVVIKT
FT                   LVSPGIHDRRFLRAFEEEARIMQLVTHPAFVRLEDRGECEQGRYLVSEYILGSSLRDSI
FT                   LSSQISLDKAISIVLQVAQAITTLHRHGVLHLDIKPENIVLSQSGEIKLIDYGLSAWQF
FT                   NHWGSPAYMSPEQSRQEPPSPASDVYSLALLAYELIMGQLALGKVYVSLLPSKISKILI
FT                   QALQPSPAARFSSMQEFAEALQDYLLHDVHEDYRKKDHVVAQIEQWHNQRAWLSPEKLS
FT                   APEEICVHIYSQKEPCYLHNIYYDMLTSGNVAEFWFCYAPGNCSFALSMMKQFLNQREE
FT                   KAKDIQTVIKSMDTLCKTMHIPICKEGISCCCFIFFLEELMCFSCGKTDFSLKKQTGGV
FT                   QRFQAESQGIGEETPLEIHEQSFLWEPGDELIVHTPKARDLVYLYCPSFLKLQDRGQID
FT                   IFCETDNLQKGIRQKYDRSLYPSTLISLKRVR"
FT   misc_feature    48833..49519
FT                   /note="HMMPfam hit to PF00069, Protein kinase domain,score
FT                   6.6e-29"
FT                   /inference="protein motif:HMMPfam:PF00069"
FT   misc_feature    49175..49213
FT                   /note="PS00108 Serine/Threonine protein kinases active-site
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00108"
FT   CDS             50248..53013
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0043"
FT                   /product="Type III secretion structural protein (outer
FT                   membrane ring)"
FT                   /db_xref="GOA:B0BAC9"
FT                   /db_xref="InterPro:IPR005644"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAC9"
FT                   /protein_id="CAP06441.1"
FT                   /translation="MNIVTSNIGSKILRIIQNNKKLGLLSALVVLDAALLSVNSRSGEG
FT                   LIGQSASLPNYHEAEQQIAACPKNIAKNLAKKSSPGAKPTVGAPSPARPVSVKAAPAKP
FT                   QAPVAQTPHFKKSHQIFSPNFTQSSQQVNKLEERRRPLESRYLQGAAKQAAAAKEKKAL
FT                   EQEVSKQEEEASKLWEEKQSYARRAVNAINFSVRKQIEEQQKTISNPGNDQTLPGKKDP
FT                   HTSGEPVIQTVQDCSQDQEEEKKVLERLNKRSLTCQDLKEVGYTVNFEDISILELLQFV
FT                   SKISGTNFVFDSNDLQFNVTIVSHDPTSVDDLATILLQVLKMHDLKVVEQGNNVLIYRN
FT                   PKLSKLSTVVTDGSAKDTCEAVVVTRVFRLYSVSPSAAVGIIQPLLSHDAIISASESTR
FT                   HIIVSDIAGNIEKVRELLQALDSPGTAIDMSEYDVQFANPAALVSYCQDVLGAMAEEEA
FT                   FQIFIQPGTNKIFVISSPRLTAKTIQLLESLDIPEMAHTLDDVTSPAAALGSSGAANPK
FT                   SLRFFMYKLKYQNGAAIAQAIQDIGYNLYVTTAMDEDFINTLNSIQWLPVNNSIVVIGN
FT                   QANVDKVVSLLNGLDLPPKQVYIEVLILETSLEKSWDFGVQWAALGDEQGKVAYASGLL
FT                   SNTGLTDPLRNQSLPVAPNPGNISLPTPGQLAGISDMMYGSSAFGLGIIGNVLSHNGKS
FT                   YLTLGGLLSALDQDGDTTVVLNPRIMAQDTQQASFFVGQTIPFQTTSTVIQETGSVTQN
FT                   IEYEDIGVNLVVTSTIAPNNVVTLQIEQTISELHSAQGVLTPVTDKTFAATRLQVPDGC
FT                   FLVMSGHIRDKLTKIVSGVPLLSSLPLIKGLFSRSIDQRQKRNIMIFIKPKVISSFEEG
FT                   TALSNTEGYRYNWESERGSLEVAPRHAPECQHIPKVQAESNFKMLEIEAE"
FT   sig_peptide     50248..50373
FT                   /locus_tag="CTLon_0043"
FT                   /note="Signal peptide predicted for CTL0043 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.983) with cleavage site
FT                   probability 0.468 between residues 42 and 43"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    51340..51525
FT                   /note="HMMPfam hit to PF03958, Bacterial type II/III
FT                   secretion system sho, score 2.5e-09"
FT                   /inference="protein motif:HMMPfam:PF03958"
FT   misc_feature    51517..51549
FT                   /note="PS00591 Glycosyl hydrolases family 10 active site."
FT                   /inference="protein motif:Prosite:PS00591"
FT   misc_feature    51532..51732
FT                   /note="HMMPfam hit to PF03958, Bacterial type II/III
FT                   secretion system sho, score 2.8e-09"
FT                   /inference="protein motif:HMMPfam:PF03958"
FT   misc_feature    51808..52035
FT                   /note="HMMPfam hit to PF03958, Bacterial type II/III
FT                   secretion system sho, score 3.2e-09"
FT                   /inference="protein motif:HMMPfam:PF03958"
FT   misc_feature    52039..52845
FT                   /note="HMMPfam hit to PF00263, Bacterial type II and III
FT                   secretion system, score 2.8e-72"
FT                   /inference="protein motif:HMMPfam:PF00263"
FT   tRNA            53147..53219
FT                   /gene="tRNA-Thr"
FT                   /product="transfer RNA-Thr"
FT                   /anticodon=(pos:53180..53182,aa:Thr)
FT                   /note="tRNA Thr anticodon CGT, Cove score 71.20"
FT   CDS             complement(53327..54397)
FT                   /transl_table=11
FT                   /gene="aspC"
FT                   /locus_tag="CTLon_0044"
FT                   /product="aspartate kinase"
FT                   /db_xref="GOA:B0BAD0"
FT                   /db_xref="InterPro:IPR014746"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD0"
FT                   /protein_id="CAP06442.1"
FT                   /translation="MLPNHILTAIATIKHSLRTETPRPICTLSLSRNLSVSKFVPCLSK
FT                   ENKRDVLETIAKQFSAIEGEEFFVLPLKDLPIWQRECLLEHYLFPYHLGSCLEGEALIV
FT                   NQAGTLLAGINLRDHLVIHGVDFVWQPEVLLQKLVDLDIRLQQSLSFAFSSDFGFLTAD
FT                   PLRCGTALIARAFVHVPALKYGDALSELLVPYQREFASSSLLPLSQESLGDILCLSNIC
FT                   SLGLSEEQILSSLRLVVSKILSAEKEARNQLVKENPTEIKNRILRSVGMLTHSCCLDLQ
FT                   EALDATSWIQLGMSMQWIEDSENHPLWNPLFWDLRRGHLALYNQDTANRSIEKEVIAQI
FT                   RAKATKPQAERLIIRI"
FT   misc_feature    complement(53615..54364)
FT                   /note="HMMPfam hit to PF00217, ATP:guanido
FT                   phosphotransferase, C-term, score 9.2e-05"
FT                   /inference="protein motif:HMMPfam:PF00217"
FT   CDS             complement(54387..54908)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0045"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:B0BAD1"
FT                   /db_xref="InterPro:IPR001943"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD1"
FT                   /protein_id="CAP06443.1"
FT                   /translation="MDHTEESPALCYNCQQPATICFTEISENITSRCYVCNSCPYPSRY
FT                   YDRETILASPTHEALILECGNCKTKWCIRDTDELLLGCHLCYRTFKSLILSRLLRYQAI
FT                   SSYTSEKANNFHIGRGLGNSEQPIINPAMRLIALHEALQETLRREDYEQAAEIRDQINQ
FT                   LKNQNTTDAP"
FT   misc_feature    complement(54408..54515)
FT                   /note="HMMPfam hit to PF02151, UvrB/uvrC motif, score
FT                   4.9e-09"
FT                   /inference="protein motif:HMMPfam:PF02151"
FT   tRNA            complement(55013..55085)
FT                   /gene="tRNA-Lys"
FT                   /product="transfer RNA-Lys"
FT                   /anticodon=(pos:55050..55052,aa:Lys)
FT                   /note="tRNA Lys anticodon TTT, Cove score 80.40"
FT   tRNA            complement(55102..55176)
FT                   /gene="tRNA-Glu"
FT                   /product="transfer RNA-Glu"
FT                   /anticodon=(pos:55138..55140,aa:Glu)
FT                   /note="tRNA Glu anticodon TTC, Cove score 49.73"
FT   CDS             complement(55280..55819)
FT                   /transl_table=11
FT                   /gene="rrf"
FT                   /locus_tag="CTLon_0046"
FT                   /product="ribosome recycling factor"
FT                   /db_xref="GOA:B0BAD2"
FT                   /db_xref="InterPro:IPR015998"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAD2"
FT                   /protein_id="CAP06444.1"
FT                   /translation="MTLASAEKEMAGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTT
FT                   MRLSDIASISVSDMRQLLISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTE
FT                   EYRREVIKQLKRKSEEAKVAIRNIRRTFNDRLKKDDNLTEDAVKSLEKKIQELTDKFCK
FT                   QIEELAKQKEAELATV"
FT   misc_feature    complement(55289..55774)
FT                   /note="HMMPfam hit to PF01765, Ribosome recycling
FT                   factor,score 4.1e-85"
FT                   /inference="protein motif:HMMPfam:PF01765"
FT   CDS             complement(55816..56553)
FT                   /transl_table=11
FT                   /gene="pyrH"
FT                   /locus_tag="CTLon_0047"
FT                   /product="uridylate kinase"
FT                   /db_xref="GOA:B0BAD3"
FT                   /db_xref="InterPro:IPR015963"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD3"
FT                   /protein_id="CAP06445.1"
FT                   /translation="MMKKRVKRVLFKISGEALSDGDSSNKISEERLSRLIAELKVVRNA
FT                   DVEVAVVIGGGNILRGLSQSQSLQINRVSADQMGMLATLINGMALADALKTEDVPNLLT
FT                   STLSCPQLAELYNPQKASDALSQGKVVICTMGAGAPYLTTDTGAALRACELKVDVLLKA
FT                   TMHVDGVYDQDPRECADAVRYDHISYRDFLSQGLGAIDPAAISLCMEAGIPIKMFSFAR
FT                   HSLEEAVFNTVGTVISSAEGGQL"
FT   misc_feature    complement(55897..56535)
FT                   /note="HMMPfam hit to PF00696, Amino acid kinase
FT                   family,score 2.3e-51"
FT                   /inference="protein motif:HMMPfam:PF00696"
FT   CDS             complement(56566..57414)
FT                   /transl_table=11
FT                   /gene="tsf"
FT                   /locus_tag="CTLon_0048"
FT                   /product="translation elongation factor TS"
FT                   /db_xref="GOA:B0BAD4"
FT                   /db_xref="InterPro:IPR000449"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAD4"
FT                   /protein_id="CAP06446.1"
FT                   /translation="MSDFSMETLKNLRQQTGVGLTKCKEALEHAKGNLEDAVVYLRKLG
FT                   LASAGKKEHRETKEGVIAALVDERGAALVEVNVETDFVANNSVFRAFVTSLLSDLLDHK
FT                   LSDVEALARVMSSQEPSLSVEELKAVTMQTVGENIRISRAFYTPVNSGQSVGIYSHGNG
FT                   KAVAIVFLSGSENQEALAKDIAMHIVASQPQFLSKESVPQEILEREREVFSSQVAGKPQ
FT                   EVVEKITQGKFKAFFQEACLLEQAFIKDPEVTIQGLIDRAAKASGEPLRVEHFVFWKMG
FT                   A"
FT   misc_feature    complement(56569..57246)
FT                   /note="HMMPfam hit to PF00889, Elongation factor TS, score
FT                   9.6e-105"
FT                   /inference="protein motif:HMMPfam:PF00889"
FT   misc_feature    complement(57160..57192)
FT                   /note="PS01127 Elongation factor Ts signature 2."
FT                   /inference="protein motif:Prosite:PS01127"
FT   misc_feature    complement(57283..57405)
FT                   /note="HMMPfam hit to PF00627, UBA/TS-N domain, score
FT                   9.2e-09"
FT                   /inference="protein motif:HMMPfam:PF00627"
FT   misc_feature    complement(57334..57381)
FT                   /note="PS01126 Elongation factor Ts signature 1."
FT                   /inference="protein motif:Prosite:PS01126"
FT   CDS             complement(57411..58259)
FT                   /transl_table=11
FT                   /gene="rpsB"
FT                   /locus_tag="CTLon_0049"
FT                   /product="SSU ribosomal protein S2"
FT                   /db_xref="GOA:B0BAD5"
FT                   /db_xref="InterPro:IPR018130"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD5"
FT                   /protein_id="CAP06447.1"
FT                   /translation="MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIID
FT                   LAKTLGQLKKAVSCIQKTIDQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGML
FT                   TNMATIRNSVKTLNRIELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLL
FT                   IVIDPGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLIVNTLKDA
FT                   VIDAKKRLGVEILSPVRPAERPAEEAVEELPLPTGEAQDEASSKEGVLLWADIDNCEAL
FT                   K"
FT   misc_feature    complement(57579..58226)
FT                   /note="HMMPfam hit to PF00318, Ribosomal protein S2, score
FT                   1.2e-84"
FT                   /inference="protein motif:HMMPfam:PF00318"
FT   misc_feature    complement(57708..57782)
FT                   /note="PS00963 Ribosomal protein S2 signature 2."
FT                   /inference="protein motif:Prosite:PS00963"
FT   misc_feature    complement(58200..58235)
FT                   /note="PS00962 Ribosomal protein S2 signature 1."
FT                   /inference="protein motif:Prosite:PS00962"
FT   tRNA            complement(58342..58412)
FT                   /gene="tRNA-Gly"
FT                   /product="transfer RNA-Gly"
FT                   /anticodon=(pos:58378..58380,aa:Gly)
FT                   /note="tRNA Gly anticodon TCC, Cove score 66.58"
FT   CDS             complement(58643..59827)
FT                   /transl_table=11
FT                   /gene="ompA"
FT                   /locus_tag="CTLon_0050"
FT                   /product="major outer membrane protein"
FT                   /db_xref="GOA:B0BAD6"
FT                   /db_xref="InterPro:IPR000604"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD6"
FT                   /protein_id="CAP06448.1"
FT                   /translation="MKKLLKSVLVFAALSSASSLQALPVGNPAEPSLMIDGILWEGFGG
FT                   DPCDPCTTWCDAISMRMGYYGDFVFDRVLQTDVNKEFQMGAKPTTATGNAAAPSTCTAR
FT                   ENPAYGRHMQDAEMFTNAAYMALNIWDRFDVFCTLGATSGYLKGNSASFNLVGLFGDSE
FT                   NHATVSDSKLVPNMSLDQSVVELYTDTTFAWSAGARAALWECGCATLGASFQYAQSKPK
FT                   VEELNVLCNAAEFTINKPKGYVGQEFPLDLKAGTDGVTGTKDASIDYHEWQASLALSYR
FT                   LNMFTPYIGVKWSRASFDADTIRIAQPKSATTVFDVTTLNPTIAGAGDVKASAEGQLGD
FT                   TMQIVSLQLNKMKSRKSCGIAVGTTIVDADKYAVTVETRLIDERAAHVNAQFRF"
FT   misc_feature    complement(58646..59755)
FT                   /note="HMMPfam hit to PF01308, Chlamydia major outer
FT                   membrane protein, score 8.2e-268"
FT                   /inference="protein motif:HMMPfam:PF01308"
FT   CDS             60435..63677
FT                   /transl_table=11
FT                   /gene="pbpB"
FT                   /locus_tag="CTLon_0051"
FT                   /product="penicillin-binding protein"
FT                   /db_xref="GOA:B0BAD7"
FT                   /db_xref="InterPro:IPR005311"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD7"
FT                   /protein_id="CAP06449.1"
FT                   /translation="MKRKRRTPLSVPEKANRLLVGFIIALSIITLRIWHVAVVQHEKKK
FT                   EEAYRPQRRSVPEHCDRAGVCDRFGKTLAENVLQYNVGISYRAIRDIPTRVWHTDEQGN
FT                   KRLVPVRKDYIKKFADFLAQELHMDRDFVEDTIHAKASVLGSVPYILQTNVSERTFLRL
FT                   KMLEKDWPGLHVESSVRRHYPEGRTVADLLGYVGPISAEEHRKITRELGNLRECIRAYE
FT                   EGEDPKFPAGISSVDQVRKLLHELEMHAYGLNSLIGKLGVEAFCDRKLRGLIGKRSMLV
FT                   DRRGNFIQEMEGSSVGSPGRTIQLTISTELQAFAHELLAEHERGEVFHDYRQWRQQQYL
FT                   PPFFPWIKGGAIVAMDPKNGQILAMASSPRYDNNDFINMKDSPNQEECRSSVLRWLENL
FT                   EYIGEVFDRRVPLRRERLDPLSGKYFDEELSFSYRAFLDFILPDTSKVKQMLCEKGSVG
FT                   LSIYLQGTIEQLLEMFECEEKECGLVFDVLFPKEDGHEIIGEVTSLKRQKQFKAILAER
FT                   EEEVQAFRERLGSIFADLSANYDKILFLDLLRTAVDPEKVSISLLAEIGHMSVLDFVDY
FT                   QGHFIALRKSFAKLMENAFIDHDFTAWREEHFTQFIKQKRDEELERKQRYPTPYVDYLV
FT                   EERSRQYALFCREHMDSFITFLLSEIEPPLGNPYYQEIACWRQELRSGAYPALEWREHY
FT                   DFLHKHLSQTSYDLCELFAAFREFSELKRPLYGQYPLTLTRNIEQIEQDLIASFYPLYG
FT                   YGHLSAHAFGQAATLGSIFKLVSAYSVLVQHLSDQEDLSKLLVIVDKQSLGLRSGKPHV
FT                   GFFKDGSPIASFFKGGILPGNDYSGRGYIDLIAALEMSSNPYFSLLVSEYLSDPEDLCE
FT                   AAKLFGFGEKTGIGLPGEYAGRVPIDVAYNRSGLYATAIGQHTLVVTPLQTAVMMATLV
FT                   NGGIVYQPSLIQGEWYQGSFSPEQAKKKREIFLPDSIVDLFKRGMHNVIWGQYGTTRFM
FT                   RQRFAPERLARIIGKTSTAEVIARVGLDRERGRMKLKDVWFAAVGYEDEALSHPDIVVV
FT                   VYLRLGEFGRDAAPMAVRMIEKWEEIRKKSFS"
FT   misc_feature    60483..60551
FT                   /note="1 probable transmembrane helix predicted for CTL0051
FT                   by TMHMM2.0 at aa 17-39"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    60603..61310
FT                   /note="HMMPfam hit to PF03717, Penicillin-binding Protein
FT                   dimerisatio, score 3e-52"
FT                   /inference="protein motif:HMMPfam:PF03717"
FT   misc_feature    62811..63641
FT                   /note="HMMPfam hit to PF00905, Penicillin binding protein
FT                   transpeptid, score 4.6e-06"
FT                   /inference="protein motif:HMMPfam:PF00905"
FT   CDS             63741..64748
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0052"
FT                   /product="tetratricopeptide repeat protein"
FT                   /db_xref="GOA:B0BAD8"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD8"
FT                   /protein_id="CAP06450.1"
FT                   /translation="MEEAEKHLAKEFLCSGINLFLSGEYEQAEERLKESLELDSEAGLA
FT                   YCYLGIIALETGRTAEALVWCKQGLEAEPGDSYLRYCYGVALDKADRLEEAIGHYQVYA
FT                   ELHPEDIECLFSLGSAYHRLLRYEEAIACFDRIAQLDPWNPQGLYNKAVILSDMEDEEG
FT                   AIDLLESTVKRNPLYWKAWVKLGYLLSRNKIWDRATEAYERVVQLRPDLSDGHYNLGLC
FT                   YLTLDKTRLALKAFQESLLLNAEDADAHFYIGLAHMDLKQNEQAYDAFYRALGINLDHE
FT                   RSHYLLGYLHHMQGESEKAEKELSFLVAKESVFAPLLQKTVSSSVFLSKKETLF"
FT   misc_feature    63867..63968
FT                   /note="HMMPfam hit to PF07719, Tetratricopeptide
FT                   repeat,score 0.0015"
FT                   /inference="protein motif:HMMPfam:PF07719"
FT   misc_feature    64071..64172
FT                   /note="HMMPfam hit to PF00515, Tetratricopeptide
FT                   repeat,score 7.9e-07"
FT                   /inference="protein motif:HMMPfam:PF00515"
FT   misc_feature    64173..64274
FT                   /note="HMMPfam hit to PF00515, Tetratricopeptide
FT                   repeat,score 0.059"
FT                   /inference="protein motif:HMMPfam:PF00515"
FT   misc_feature    64275..64376
FT                   /note="HMMPfam hit to PF07719, Tetratricopeptide
FT                   repeat,score 0.00011"
FT                   /inference="protein motif:HMMPfam:PF07719"
FT   misc_feature    64377..64478
FT                   /note="HMMPfam hit to PF00515, Tetratricopeptide
FT                   repeat,score 3e-06"
FT                   /inference="protein motif:HMMPfam:PF00515"
FT   misc_feature    64479..64580
FT                   /note="HMMPfam hit to PF00515, Tetratricopeptide
FT                   repeat,score 2.5e-05"
FT                   /inference="protein motif:HMMPfam:PF00515"
FT   CDS             65090..66541
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0053"
FT                   /product="conserved hypothetical protein"
FT                   /note="Note the COG0719 motif associated with, SufB, an
FT                   ABC-type transport system protein"
FT                   /db_xref="GOA:B0BAD9"
FT                   /db_xref="InterPro:IPR010231"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAD9"
FT                   /protein_id="CAP06451.1"
FT                   /translation="MDAPVDKFLQQQEYPYGFVTPIQSEGLAPGISEEHIEQLVHLRGE
FT                   PKFLLDFRLKAFRLWQKMEEPTWARLRYPPIAYDDIVYFSAPKTQKPLGKLEDADPEIL
FT                   ETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYP
FT                   DLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFE
FT                   RTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTG
FT                   KGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALTNGK
FT                   MQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSMLVG
FT                   ERCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCREV
FT                   IELLPLEFAREATKLLMIKLENSVG"
FT   misc_feature    65726..66451
FT                   /note="HMMPfam hit to PF01458, Uncharacterized protein
FT                   family (UPF0051), score 6.4e-117"
FT                   /inference="protein motif:HMMPfam:PF01458"
FT   CDS             66544..67311
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0054"
FT                   /product="ABC transporter ATP-binding protein"
FT                   /db_xref="GOA:B0BAE0"
FT                   /db_xref="InterPro:IPR010230"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE0"
FT                   /protein_id="CAP06452.1"
FT                   /translation="MLHLCDVHVCCEEKKILEGLSLSIRPGELHIIMGPNGAGKSTLAK
FT                   VLSGDESVEVSSGTMTLAGQDLLEMSPEERAHAGMFISFQHPPEIPGVNNRIFLKEACN
FT                   ACRKARNQVVLDDAAFEELLTHLEEVYGFPGFHFFSNRNVNEGFSGGEKKKNELWQMLA
FT                   LEPKMVVLDEPDSGLDVDALKGICSVLQRYRQQHPETAFCIVTHNPRLGDLLQPDHVHI
FT                   LLNGRVVFSGDMHLMEELERKSYQELLDVVTQE"
FT   misc_feature    66622..67221
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   6.5e-25"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    66643..66666
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             67315..68502
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0055"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:B0BAE1"
FT                   /db_xref="InterPro:IPR011542"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE1"
FT                   /protein_id="CAP06453.1"
FT                   /translation="MWGTHQQRQIHPDARLADVTRSVWRQYQRDHVFREACSWLKEMTQ
FT                   EDSWIYCVGGCEIGAISPEERSATCVFVNGCFAPSLSVLPAEIIVAPLREARAFFQKHD
FT                   EEDVVEELHSLLRGEEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLG
FT                   KGAAISIEMGMSALPDNVYLFGKTLCFLGEEAELVLTMKPLPKGTERIIWAHHVEVERR
FT                   GACALIQDMRSMGKGWFRNSFFLKGEAAHGESLVKVLGGDFLGVHNTMHHDDRETTSRQ
FT                   NIRSILEEGSFSFEGGIYISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKAS
FT                   HGATVGSLNAHLLTYLRSRGFSLIEAKQALQKSFLTLDIEKPYFPKLQKQDLYHV"
FT   misc_feature    67753..68436
FT                   /note="HMMPfam hit to PF01458, Uncharacterized protein
FT                   family (UPF0051), score 1.3e-10"
FT                   /inference="protein motif:HMMPfam:PF01458"
FT   CDS             68495..69700
FT                   /transl_table=11
FT                   /gene="sufS"
FT                   /locus_tag="CTLon_0056"
FT                   /product="cysteine desulfurase"
FT                   /db_xref="GOA:B0BAE2"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE2"
FT                   /protein_id="CAP06454.1"
FT                   /translation="MYNVKKDFPIFKNQGDPYVYLDSAATTHKPQCVIDSIVDYYSSSY
FT                   ATVNRALYTASHDITFAHWQVRSKVGSWIGAQYDQEIIFTRGTTSSLNLLAIAANDSWL
FT                   AGGTVVISEAEHHANLVSWELACQRSGATIKKVRVDDEGMVDCNHLEQLLKQGVQLVSL
FT                   AHVSNVSGAVLPLPEIAHLVHRYEALFAVDGAQGVGKGPLNLSEWGVDFYAFSGHKLYA
FT                   PTGIGVLYGKKELLESLPPVEGGGDMVIVYDFEELSYQEPPLRFEAGTPHIAGVLGLGA
FT                   AIDYLQALPFSITDRLTELTHFLYEQLLTVPGIQIIGPKQGAARGSLCSISIPGVQASD
FT                   LGFLLDGRGISVRSGHQCSQPAMVRWDLGHVLRASLGIYNDQQDILLFVEALKDILRAY
FT                   RS"
FT   misc_feature    68549..69658
FT                   /note="HMMPfam hit to PF00266, Aminotransferase
FT                   class-V,score 3.2e-197"
FT                   /inference="protein motif:HMMPfam:PF00266"
FT   misc_feature    68687..69421
FT                   /note="HMMPfam hit to PF01212, Beta-eliminating lyase,score
FT                   0.0031"
FT                   /inference="protein motif:HMMPfam:PF01212"
FT   misc_feature    69122..69181
FT                   /note="PS00595 Aminotransferases class-V
FT                   pyridoxal-phosphate attachment site."
FT                   /inference="protein motif:Prosite:PS00595"
FT   CDS             69836..70681
FT                   /transl_table=11
FT                   /gene="parB"
FT                   /locus_tag="CTLon_0057"
FT                   /product="putative chromosome partitioning protein"
FT                   /db_xref="GOA:B0BAE3"
FT                   /db_xref="InterPro:IPR004437"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE3"
FT                   /protein_id="CAP06455.1"
FT                   /translation="MSRLPSEDTLLEVNIEDIRVSPFQPRRTFLEEDLKELVLSIKTVG
FT                   LIHPPVVREIRNGDKVLYYELIAGERRWRALQLAGYKTVPVVLKQVLADDMAAEATLIE
FT                   NIQRVNLNPLEMAEAFRRLIVVFGLTQDKVAKKVGKKRSTVANYLRLFSLPQEVQEKMN
FT                   SGEISLGHAKVILSLEDENLRQILSQKIISCKLAVREAEMEAKRLVKGKGASLKEDSSS
FT                   QPSSRLGFCQERLATTFGYPVTVKPQGRRICVSFFVEGEEALEALEKALTTSSSEAILT
FT                   "
FT   misc_feature    69866..70153
FT                   /note="HMMPfam hit to PF02195, ParB-like nuclease
FT                   domain,score 9.8e-36"
FT                   /inference="protein motif:HMMPfam:PF02195"
FT   CDS             complement(70673..71503)
FT                   /transl_table=11
FT                   /gene="dppF"
FT                   /locus_tag="CTLon_0058"
FT                   /product="ABC transport protein, ATPase component"
FT                   /db_xref="GOA:B0BAE4"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE4"
FT                   /protein_id="CAP06456.1"
FT                   /translation="MNNPLLLQASRLTKHYYKRSFWFQKKKVATTPLNQVSFSLPRHKI
FT                   IGLIGESGSGKTTLALGLAGLIPLTSGHLILNDKAIPLHNKKGRQYLSSQVRMVFQNPR
FT                   SSLNPRKTIFDTLSHSLLYHRLVSKEELGATVEKALSLVGLSTDYLYSYPHQLSGGQLQ
FT                   RISIARALLGAPQLIICDEIVSALDLSMQAQILNMLTSLQQQARLTYLFISHDLAVVRS
FT                   FCSELIIMYKGQIVETGATEAIFCNPQHSYTRMLLHSQLPEFPEDRRDVQVPLS"
FT   misc_feature    complement(70805..71377)
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   6.5e-46"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    complement(70991..71035)
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:Prosite:PS00211"
FT   misc_feature    complement(71333..71356)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             complement(71496..72461)
FT                   /transl_table=11
FT                   /gene="dppD"
FT                   /locus_tag="CTLon_0059"
FT                   /product="ABC transport protein, ATPase component"
FT                   /db_xref="GOA:B0BAE5"
FT                   /db_xref="InterPro:IPR018072"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE5"
FT                   /protein_id="CAP06457.1"
FT                   /translation="MCAQPLLQVKNLSVSLNRNRVSFLAVDSLSFDVFPGQTLAIIGES
FT                   GSGKSITAQSLMQLLPEENFSLSGEALFNKENLLDRKNTNAKVLFGSKISMIFQNPLAS
FT                   FDPVFTIEQQFHEVIRTHLGISNKMAHEQMLAVLRETGFQDPERCIKLYPHELSGGMLQ
FT                   RMAIAMTLLTSPDLLIADEPTTALDVSVQYQILQLLKTLQKKTGMSLLIITHDMGVVAE
FT                   MADDVFVLYAGRMAEYSSVQEIFHSPAHPYTEDLLASRPSQYRQQTFVPIAGQPPHYTR
FT                   LPKGCCYSPRCRKAQPICFEKSPDSLSLNDHHRVRCWLHE"
FT   misc_feature    complement(71565..71756)
FT                   /note="HMMPfam hit to PF08352, Oligopeptide/dipeptide
FT                   transporter, C-termi, score 5.8e-21"
FT                   /inference="protein motif:HMMPfam:PF08352"
FT   misc_feature    complement(71763..72356)
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   2.2e-50"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    complement(71949..71993)
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:Prosite:PS00211"
FT   misc_feature    complement(72312..72335)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             72622..73296
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0060"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR018445"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE6"
FT                   /protein_id="CAP06458.1"
FT                   /translation="MQVLASLFGQSPFAPLQAHLELVSSTINVLFPLFSALKEGDYERV
FT                   GVLAQLVSSKERQADGMKNDVRRHLASGVFLPVSRAALLEIISIQDSLADCAEDIAILL
FT                   TVKELQFYPEFEELFFEFLQKTVQSFEAVAKTIREMDRLLESSFGGNRADKTRVLVSEV
FT                   SNLEHECDLLQRELMKVFFSDDFAIGTKGFVLWMQIIKGISGISNNSEKLAYRVSMTLE
FT                   EK"
FT   misc_feature    72631..73290
FT                   /note="HMMPfam hit to PF01865, Protein of unknown function
FT                   DUF47, score 3.3e-111"
FT                   /inference="protein motif:HMMPfam:PF01865"
FT   CDS             73299..74579
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0061"
FT                   /product="low-affinity inorganic phosphate transporter"
FT                   /db_xref="GOA:B0BAE7"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE7"
FT                   /protein_id="CAP06459.1"
FT                   /translation="MWLLLVCVVVGGFYTAWNIGANDVANAVGPSVGAGALTLKQAVLI
FT                   AAVFEFLGAVLLGDRVIGTIESGLVAPSGHVLSSQDYVFGMAAALLATGVWLQIASFCG
FT                   WPVSTTHAIVGAVLGFGIILKEDAVIYWNSCGRVFVSWLASPIIGGYFAFLIFSFIRKA
FT                   ILYKKDPVSAMVRIAPFLSAIIIFALGLVLILSGAVAPVISFSPALRIVCGLSLFAFFF
FT                   TIWGIRFFKLAILPQEVLPGTLLDRLLSKSTDYGRKYLIVERIFAYLQMIIACFMSFAH
FT                   GSNDVANAIAPVAGIYRTLYPQSYSSKVLLVFMSLGGLGLVCGLATWGWRVIDTIGKKI
FT                   TELTPSRGFSVGMSSAITIAAASSLGFPISTTHVVVGSVLGIGFARGLRAINLRIIKDI
FT                   VLSWFITVPAGAALSIVFFLLLRALFC"
FT   misc_feature    order(73302..73361,73404..73472,73599..73667,73710..73778,
FT                   73839..73907,73920..73988,74076..74144,74226..74294,
FT                   74382..74450,74493..74561)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CTL0061 by TMHMM2.0 at aa 2-21, 36-58,
FT                   101-123,138-160,181-203, 208-230, 260-282, 310-332, 362-384
FT                   and 399-421"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    73353..74540
FT                   /note="HMMPfam hit to PF01384, Phosphate transporter
FT                   family, score 8.1e-191"
FT                   /inference="protein motif:HMMPfam:PF01384"
FT   misc_feature    74343..74387
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:Prosite:PS00211"
FT   CDS             74707..75918
FT                   /transl_table=11
FT                   /gene="pgk"
FT                   /locus_tag="CTLon_0062"
FT                   /product="phosphoglycerate kinase"
FT                   /db_xref="GOA:B0BAE8"
FT                   /db_xref="InterPro:IPR015824"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAE8"
FT                   /protein_id="CAP06460.1"
FT                   /translation="MDKLSIRDLSLEGKKVLVRVDFNVPIKDGKILDDVRIRSAMPTIH
FT                   YLLKQDAAVILVSHLGRPKGGVFEEAYSLAPIVPVLEGYLGHHVPLSPDCIGEVARQAV
FT                   AQLSPGRVLLLENVRFHKGEEHPDEDPSFAIELAAYADFYVNDAFGTSHRKHASVYRVP
FT                   QLFPDRAAAGFLMEKELEFLGQHLLVEPKRPFTAILGGAKMSSKIGVIEALLSCVDHLV
FT                   LAGGMGYTFLRAMNRQVGNSLVEESGIPLAKKVLEKAQALGVKIHLPVDAKVAKQCDSG
FT                   EDWRELSIQEGIPEGLAGFDIGAQTIELFSKVIQESATIFWNGPVGVYEVPPFDQGSKA
FT                   IAQCLASHSSAVTVVGGGDAAAVVALAGCTSQISHVSTGGGASLEFLEKGSLPGTEILS
FT                   PAQS"
FT   misc_feature    74707..75900
FT                   /note="HMMPfam hit to PF00162, Phosphoglycerate
FT                   kinase,score 8.8e-182"
FT                   /inference="protein motif:HMMPfam:PF00162"
FT   misc_feature    74749..74781
FT                   /note="PS00111 Phosphoglycerate kinase signature."
FT                   /inference="protein motif:Prosite:PS00111"
FT   CDS             76178..77146
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0063"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAE9"
FT                   /protein_id="CAP06461.1"
FT                   /translation="MSIRPTNGSGNGYPSINPSNDNQDGLVQSTSGPNYGGHTVSSRGG
FT                   FQGICVRIADLFRNCFSRNRGTTTPSRPVITQADIYHPTIFGQGAQPIVSTGDKKLDSA
FT                   IIQADLRAQNKQTLATHIQSKLGSMEGQSPQDYKAGAYSALRLMLFTPGETTVSSERER
FT                   QACVTGRDLWEQAAGDLATNGNTDGLMLMANLSVGGKHVPAGHLREYMNTVKGTFTDEN
FT                   EATDPTVDAILDLAAKIDATEFSSPGSGQVILNYVGNCGQVVLENEKMNQLVLEDQNGQ
FT                   DPQRVQDNSKELQKLLENARKTDPELYFQTLTVITSSVFLD"
FT   CDS             77197..78393
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0064"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAF0"
FT                   /protein_id="CAP06462.1"
FT                   /translation="MSSISPIGGNSGPDGFSSASRGDEIDDVPDSEEGELEERVSDHAE
FT                   SIITESSETLFRTTSSSGVSEDLQQHVSLEESPRQRGFLGRIRDAVASIWKRRVARRNE
FT                   NYDVKKAEEQQGIVQYLQDSKMPALTRAYRHLRAFNSACLRTIREFFATIFRALRDAYY
FT                   RHCTRSGINFCGADKDSLEVLVAVGLLLRMATLRSFEHVGGNYEDRLVNNDAPVTGAGR
FT                   TLVDDAVDDIESILNTRTNWPQHVMIGFSRGLVQLCATPYNATSQECFKSIVRLEKEDP
FT                   SSDYSQALLLAGIIDRLAEKAPMAAKYVLDALRVRTSELIGELIILDLLPPVWKVGRGG
FT                   VFPPVNEQLVVQIVNANVERLHSTFAHEPQAYLRMIEGLVTNFFFLPSEEDPSSVGNI"
FT   CDS             78479..79657
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0065"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAF1"
FT                   /protein_id="CAP06463.1"
FT                   /translation="MLLDSRFPTDYYLRILELVIRDASCKLVYNRRLHMLEAIPLDQKL
FT                   STDQEGESSILREVISELLAHSGESYAISAQLLAVIDIYLKQEQPSNSWFARIFRKRER
FT                   ARKRQTINKLLLLKSILFFERQRPVKKVESVADSILQRSKGNFSSWDDFTHDVQTQKSG
FT                   RETDMPDSLRGRVEEDAASQMIVEVLLAFLDNQDMYLSVSFEILRNFLEEKVLSKRSLS
FT                   PRSHEAIKKIKDLYLVSPEDFQTFIGGVITESLFQEEDQLVVGCMIFSQEGRELFDSWK
FT                   GISQTYPHDMLYTQAFLAEVVLHVVQHHIHLNAKVKPTSPEQVGSLYSIRDHSPQAWAR
FT                   MMRVLLMRWLLDYHFDVYAHLKEEILRCPPRPPFWQMIPSESGDGTFRKEAR"
FT   CDS             complement(79654..80289)
FT                   /transl_table=11
FT                   /gene="nth"
FT                   /locus_tag="CTLon_0066"
FT                   /product="endonuclease III"
FT                   /db_xref="GOA:B0BAF2"
FT                   /db_xref="InterPro:IPR003583"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAF2"
FT                   /protein_id="CAP06464.1"
FT                   /translation="MKSLNVQAKRAFIISTLNRLFPNPAPSLTGWQTPFQLLIAILLSG
FT                   NSTDKAVNSVTPSLFAKAPDAQSMSMLAPSEIYSLIAPCGLGERKAAYIHALSHILVDR
FT                   YHQEPPHTLPELTALPGVGRKTASVFLSIYYGENTFPVDTHILRLAHRWQLSTKRSPSA
FT                   VEKDLVQFFGPKHSPKLHLQLIYYARAYCPALHHNIDVCPICSFLQTD"
FT   misc_feature    complement(79768..80175)
FT                   /note="HMMPfam hit to PF00730, HhH-GPD superfamily base
FT                   excision DNA repair, score 8.2e-22"
FT                   /inference="protein motif:HMMPfam:PF00730"
FT   misc_feature    complement(79891..79980)
FT                   /note="HMMPfam hit to PF00633, Helix-hairpin-helix
FT                   motif,score 2.1e-05"
FT                   /inference="protein motif:HMMPfam:PF00633"
FT   CDS             complement(80296..81630)
FT                   /transl_table=11
FT                   /gene="trmE"
FT                   /locus_tag="CTLon_0067"
FT                   /product="tRNA modification GTPase"
FT                   /db_xref="GOA:B0BAF3"
FT                   /db_xref="InterPro:IPR004520"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAF3"
FT                   /protein_id="CAP06465.1"
FT                   /translation="MLRNDTITAIATPPGEGSIAIVRVSGPDAISISDRIFSGNIAGYA
FT                   SHTAHLGTVSHNAVCIDQALVLVMRAPRSFTGEDIVEFQCHGGYFACSQIVNALLAEGA
FT                   RAALPGEFSQRAFLNGKIDLIQAEAIQQLIAADNIDAFRIAQNQFQGHTSQAISSISSL
FT                   IIEALAYIEVLADFPEEDIETEDSLPKHRIMEALSITDELLSSFDEGQRLAQGTSIVLA
FT                   GLPNAGKSSILNALTQKNRAIVTDIPGTTRDILEENWVLQGKNLRLIDSAGLRETENLV
FT                   EKEGIARAREAMSQAEGILWVVDASQPLPEFPTILYQKPTILLWNKCDIVSPPQIEVPF
FT                   QQISVSAKTGEGLLELKQALQKWLNTTQLGKSSKIFLVSARHHSLLHSVYTCLTAALNG
FT                   FTEHLPNECIALDLRQALHSIGNLSGSEVTENVLGEIFSKFCIGK"
FT   misc_feature    complement(80644..80982)
FT                   /note="HMMPfam hit to PF01926, GTPase of unknown
FT                   function,score 3e-41"
FT                   /inference="protein motif:HMMPfam:PF01926"
FT   misc_feature    complement(80941..80964)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             81898..82803
FT                   /transl_table=11
FT                   /gene="psdD"
FT                   /locus_tag="CTLon_0068"
FT                   /product="phosphatidylserine decarboxylase"
FT                   /db_xref="GOA:B0BAF4"
FT                   /db_xref="InterPro:IPR005221"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAF4"
FT                   /protein_id="CAP06466.1"
FT                   /translation="MAAREMLYVNRETGKVEQERIICSSLVKFFIETRIGRALYSVLCK
FT                   NSLFSRIVGWCQRLRVTRYFIKPFVTKYRICIEESASPLHDYASFNDFFVRKLKPDARP
FT                   ICQGEDICVTPADGAYLVFPSMADLSLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIAR
FT                   LAPFDYHRFHFPIAGIAEAPRRINGHLFSIHPLMLKRNFEVFTENKREITIITSKEFGE
FT                   VAYVEVGALNVGSIHQTFSPGSYVKKGAEKGFFAFGGSTVVLLFQPQRIIFDADLVGYS
FT                   AQGLETRCRMGQSLGKHFSS"
FT   misc_feature    82165..82788
FT                   /note="HMMPfam hit to PF02666, Phosphatidylserine
FT                   decarboxylase, score 1e-113"
FT                   /inference="protein motif:HMMPfam:PF02666"
FT   CDS             82869..84194
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0069"
FT                   /product="putative exported protein"
FT                   /note="note the PF07719 Tetratricopeptide repeat motif"
FT                   /db_xref="GOA:B0BAF5"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAF5"
FT                   /protein_id="CAP06467.1"
FT                   /translation="MWLIVAWTLLACLAMALVFKAYRHVISFRSYVNQVMRDVRLSVDL
FT                   KEWAVAEMRLAPILKKRQYRRKYLFEYIRILRELERFEEAEKLLGEAKKLKLAGAHFFL
FT                   EVAHKAFRHGAYKEAAHAFSLLSAELMGEREVARYTISLVYLGEVDAACRIIEPWIGPL
FT                   AHQEVFISVGHIYFATKRYADAIDFYRRARSLGSCPIDVLYNLAHSLRICGQYVDAGML
FT                   FRELLGDPVYKDEAMFNIGLCEQKLGNSKKALLIYQNSELWVRGDALMMRYAALAAADQ
FT                   QDYQLAEHCWTLAFRCQSYADDWNCCVHYGLALCHLKKYAEAEKVYLRVIQKTPDCLVA
FT                   CKALAWLAGVGHATMISAREGIAYAKRALQIKRSPEVLELLSACEAREGNFDVAYDIQA
FT                   ILAERDTTAKERERRSQILKNLRQKLPIDQQHIVEVSLLLAA"
FT   sig_peptide     82869..82916
FT                   /locus_tag="CTLon_0069"
FT                   /note="Signal peptide predicted for CTL0069 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.975) with cleavage site
FT                   probability 0.517 between residues 16 and 17"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    82872..82904
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   misc_feature    82872..82925
FT                   /note="1 probable transmembrane helix predicted for CTL0069
FT                   by TMHMM2.0 at aa 2-19"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    83778..83879
FT                   /note="HMMPfam hit to PF07719, Tetratricopeptide
FT                   repeat,score 0.00073"
FT                   /inference="protein motif:HMMPfam:PF07719"
FT   CDS             84453..87362
FT                   /transl_table=11
FT                   /gene="secA"
FT                   /locus_tag="CTLon_0070"
FT                   /product="preprotein translocase subunit"
FT                   /db_xref="GOA:B0BAF6"
FT                   /db_xref="InterPro:IPR011116"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAF6"
FT                   /protein_id="CAP06468.1"
FT                   /translation="MMDFLKRFFGSSQERILKRFQKLVEEVNACDEKFSSLSDDELREK
FT                   TPQLKQRYQDGESLDKLLPEAYGVVKNVCRRLAGTPVEVSGYHQQWDMVPYDVQILGAI
FT                   AMHKGFITEMQTGEGKTLTAVMPLYLNALTGKPVHLVTVNDYLAQRDCEWVGSVLRWLG
FT                   LTTGVLVSGSPPEKRKAIYQCDVVYGTASEFGFDYLRDNSIATRKEEQVGRGFYFAIID
FT                   EIDSVLIDEARTPLIISGPGEKHNPVYFELKDRVAELVYFQREMCNHIAIEARKVLDPF
FT                   LGTDVLPKDKKVMEAISEACRALWLVSKGMPLNRVLRRVREHPDLRAMIDKWDVFYHAE
FT                   QNKEECLEKLSSLYIVVDEHNNDFELTDKGMLQWIEKIGGAAEDFVMMDMGHEYALIEE
FT                   DATLSPADKLNRKIAVSEKDTQRKARAHGLRQLLRAHLLMEKDIDYIVRDDQIVIIDEH
FT                   TGRPQPGRRFSEGLHQAIEAKEHVTIRKESQTFATVTLQNFFRLYEKLAGMTGTAITES
FT                   REFKEIYSLYVLQVPTFKPCLRIDHNDAFYMTEREKYQAIVAEIISAHRSGKPILIGTE
FT                   SVEVSEKLSRILRQNRINHTVLNAKNHAQEAEIIAGAGKVGAVTVATNMAGRGTDIKLD
FT                   EEAVAAGGLYVIGTSRHQSRRIDRQLRGRCARLGDPGAAKFFLSFEDRLMRLFASPKLN
FT                   TLIRHFRPPEGEAMSDPMFDRLIETAQKRVEGRNYTIRKHTLEYDDVMNKQRQTIYAFR
FT                   NDVLHAEDLFVVAKEQIEHVALALAFLILKDAHADHCSLPKIEEWLSYSFPVKLDDQEI
FT                   RRLGDVDAVADYIGDLLIEAFDVKFSAMLAEFTEIIGSAANAQGICNDILRSVIISHID
FT                   EEWKVHLVDMDLLRSEVGLRSVGQKDPLIEFKNESFLLFEGLIRDIRIAIVKHLFALEL
FT                   SLTRSDRPDNAIPTVATAFHNHDNFRPMELTIVGEEEES"
FT   misc_feature    84465..86015
FT                   /note="HMMPfam hit to PF07517, SecA DEAD-like domain,score
FT                   6.2e-162"
FT                   /inference="protein motif:HMMPfam:PF07517"
FT   misc_feature    85476..85883
FT                   /note="HMMPfam hit to PF01043, SecA preprotein
FT                   cross-linking domain, score 4.5e-16"
FT                   /inference="protein motif:HMMPfam:PF01043"
FT   misc_feature    86307..86354
FT                   /note="PS01312 Protein secA signatures."
FT                   /inference="protein motif:Prosite:PS01312"
FT   misc_feature    86571..87242
FT                   /note="HMMPfam hit to PF07516, SecA Wing and Scaffold
FT                   domain, score 8.5e-42"
FT                   /inference="protein motif:HMMPfam:PF07516"
FT   CDS             complement(87456..87983)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0071"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAF7"
FT                   /protein_id="CAP06469.1"
FT                   /translation="MHYEPYDEFEPDNELDHLICESDKTKPLDAYHDTGVYIEEDDREN
FT                   GDLLIVLGKSILNGAIRQFYISDHNYAYTRGYYQGCWEGWFNIPPKKITTAEYDCDQLL
FT                   QPDLLLTTNVEKLIHAPEDFPAQNANLDNIIICMTALNGEHRVQFLIGDNHRSFWIRHH
FT                   DGESWSKWSTFI"
FT   CDS             complement(88060..89532)
FT                   /transl_table=11
FT                   /gene="engA"
FT                   /locus_tag="CTLon_0072"
FT                   /product="GTP-binding protein"
FT                   /db_xref="GOA:B0BAF8"
FT                   /db_xref="InterPro:IPR005225"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAF8"
FT                   /protein_id="CAP06470.1"
FT                   /translation="MRIAILGRPNVGKSSLFNRLCRRSLAIVNSQEGTTRDRLYGEIRA
FT                   WDSIIHVIDTGGVDQESTDRFQKQIHQQALAAAEEASVLLLVVDIRCGITKQDEELAKR
FT                   LLPLKKPLILVMNKADSQQDLQRIHEFYGLGISDMIATSASHDKHIDLLLERIRQIAQI
FT                   PVPSVEEQDVVQEDELPSEEAAISLHAFADETLFENESLSQEEASFLEELVAQTATPAP
FT                   VDRPLKVALIGHPNVGKSSIINALLKEERCITDNSPGTTRDNIDVAYTHNNKEYVFIDT
FT                   AGLRKTKSIKNSVEWMSSSRTEKAISRTDICLLVIDATQQLSYQDKRILSMIARYKKPH
FT                   VILVNKWDLMFGVRMEHYVQDLRKMDPYIGQAHILCISAKQRRNLLQIFSAIDDIYTIA
FT                   TTKLSTSLVNKVLASAMQRHHPQVINGKRLRIYYAIHKTTTPFTFLLFINSNSLLTKPY
FT                   ELYLKNTLKAAFNLYRVPFDLEYKAKPARKSN"
FT   misc_feature    complement(88489..88854)
FT                   /note="HMMPfam hit to PF01926, GTPase of unknown
FT                   function,score 8.5e-45"
FT                   /inference="protein motif:HMMPfam:PF01926"
FT   misc_feature    complement(88813..88836)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    complement(89173..89532)
FT                   /note="HMMPfam hit to PF01926, GTPase of unknown
FT                   function,score 4.3e-41"
FT                   /inference="protein motif:HMMPfam:PF01926"
FT   misc_feature    complement(89491..89514)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             complement(89648..90880)
FT                   /transl_table=11
FT                   /gene="pcnB"
FT                   /locus_tag="CTLon_0073"
FT                   /product="polyA polymerase"
FT                   /db_xref="GOA:B0BAF9"
FT                   /db_xref="InterPro:IPR002646"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAF9"
FT                   /protein_id="CAP06471.1"
FT                   /translation="MTQSTLEVAKKIVRKLRNAGYQAYFVGGSVRDMLLGRPIEEVDIA
FT                   TNASPTIVTTIFPDTLSIGAAFGIIAVKENGQLFEVATFRSDEDYEDGRHPNRVVFASM
FT                   KDDAIRRDFTINGMYYDPFEEKLFDLVEGRADLERKIIRAIGHPKQRFLEDKLRILRAI
FT                   RFAATLGFALDPQTEQAIIKELPSLPNSVSPERIWQELKKMLRTAPYESLQLLTKLKVL
FT                   PILFPELKVSSSGFLRSAIAFAQKIHDSQIPEIALLLPLFREVDKEKALEAFSRLRVSN
FT                   KELKLLEDWYAALPQFLSKQNDKFFWAHFFASETSSLLLSLFLSMQRSPDEQELFIARI
FT                   HDLKTRLAAFIERIQSGAPLVSAQDLIAKGITPGRLLGELLREAEALSIEHECSDKEKI
FT                   LSLLKSKGFWK"
FT   misc_feature    complement(90176..90640)
FT                   /note="HMMPfam hit to PF01743, Poly A polymerase
FT                   family,score 3.1e-78"
FT                   /inference="protein motif:HMMPfam:PF01743"
FT   CDS             complement(90895..92154)
FT                   /transl_table=11
FT                   /gene="clpX"
FT                   /locus_tag="CTLon_0074"
FT                   /product="ATP-dependent Clp protease, ATP-binding
FT                   component"
FT                   /db_xref="GOA:B0BAG0"
FT                   /db_xref="InterPro:IPR010603"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAG0"
FT                   /protein_id="CAP06472.1"
FT                   /translation="MTKKNLAVCSFCGRSEKDVEKLIAGPSVYICDYCIKLCSGILDKT
FT                   PAPATQEIATSSTSSPTSLRVLTPKEIKRHIDSYVIGQERAKKTISVAVYNHYKRIRAL
FT                   MQDKQVSYGKSNVLLLGPTGSGKTLIAKTLAKILDVPFTIADATTLTEAGYVGEDVENI
FT                   VLRLLQAADYDVARAERGIIYIDEIDKIGRTTANVSITRDVSGEGVQQALLKIIEGTVA
FT                   NIPPKGGRKHPNQEYIRVNTENILFIVGGAFVNLDKIIAKRLGRTTIGFSEETDLAVTN
FT                   RDHLLAKVETEDLITFGMIPEFIGRFNCIVNCEELTLDELVEILTEPANAIVKQYTELF
FT                   EEENVKLIFEKEALYAIAQKAKQAKTGARALGMILENLLRDLMFEIPSDPTVEAIRIEE
FT                   DTITQNKPPVIIQKSPEAIA"
FT   misc_feature    complement(91153..91809)
FT                   /note="HMMPfam hit to PF00004, ATPase family associated
FT                   with various cell, score 1.3e-05"
FT                   /inference="protein motif:HMMPfam:PF00004"
FT   misc_feature    complement(91225..91821)
FT                   /note="HMMPfam hit to PF07724, ATPase family associated
FT                   with various cell, score 1e-79"
FT                   /inference="protein motif:HMMPfam:PF07724"
FT   misc_feature    complement(91771..91794)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    complement(92020..92139)
FT                   /note="HMMPfam hit to PF06689, ClpX C4-type zinc
FT                   finger,score 1.6e-21"
FT                   /inference="protein motif:HMMPfam:PF06689"
FT   CDS             complement(92164..92775)
FT                   /transl_table=11
FT                   /gene="clpP"
FT                   /locus_tag="CTLon_0075"
FT                   /product="ATP-dependent Clp protease proteolytic component"
FT                   /db_xref="GOA:B0BAG1"
FT                   /db_xref="InterPro:IPR018215"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAG1"
FT                   /protein_id="CAP06473.1"
FT                   /translation="MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVI
FT                   AQLLFLMSEDPTKDIQIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLL
FT                   SAGTKGKRYALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVE
FT                   KIIEDSERDFFMGAEEAIAYGLIDKVISSAKETKDKSIAS"
FT   misc_feature    complement(92197..92742)
FT                   /note="HMMPfam hit to PF00574, Clp protease, score
FT                   1.7e-117"
FT                   /inference="protein motif:HMMPfam:PF00574"
FT   misc_feature    complement(92401..92442)
FT                   /note="PS00382 Endopeptidase Clp histidine active site."
FT                   /inference="protein motif:Prosite:PS00382"
FT   misc_feature    complement(92473..92508)
FT                   /note="PS00381 Endopeptidase Clp serine active site."
FT                   /inference="protein motif:Prosite:PS00381"
FT   misc_feature    complement(92506..92553)
FT                   /note="PS00225 Crystallins beta and gamma 'Greek key' motif
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00225"
FT   CDS             complement(92942..94270)
FT                   /transl_table=11
FT                   /gene="tig"
FT                   /locus_tag="CTLon_0076"
FT                   /product="trigger factor (chaperone)"
FT                   /db_xref="GOA:B0BAG2"
FT                   /db_xref="InterPro:IPR008881"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAG2"
FT                   /protein_id="CAP06474.1"
FT                   /translation="MSSRDFSNDLFSINIEENAGCVVSAKVQANPLVTQKCHKEALKTV
FT                   KKNVVLPGFRKGKAPDNIVESRYSTQVEQELRRLFLRASFEALSQMCDRKPLSPKAVRS
FT                   SAIDTCNPVNGGSVSFLYEAFPVIPSLPWEQLSLPDPEPVKEISEEDLENGLKNVAYFF
FT                   ATKTPVTRPSQEGDFISLSLYVSKRGDENSTPVAIFENKYFKISEEDMTDSFKARFLNV
FT                   STGHRVEEEIGSEDIQSFLNGDLLTFTVNAVIEISSPEMDDEKARELQAESLEDLKKKL
FT                   RIQLENQAKEAQHQKRFSDAEDALAQLIDFDLPESLLREREELLSREKLLNARLVKYCS
FT                   DSELEEQKQALLEEAKADARKAVKLLFLTQKVFSEKGLSISREELQYMMDVCSRERFGG
FT                   YPPKDISNEMIQELVLVARDRLTYRKAIEAISSEKKDLEVVPS"
FT   misc_feature    complement(92990..93517)
FT                   /note="HMMPfam hit to PF05698, Bacterial trigger factor
FT                   protein (TF) C-ter, score 6.1e-35"
FT                   /inference="protein motif:HMMPfam:PF05698"
FT   misc_feature    complement(93791..94240)
FT                   /note="HMMPfam hit to PF05697, Bacterial trigger factor
FT                   protein (TF), score 1e-38"
FT                   /inference="protein motif:HMMPfam:PF05697"
FT   tRNA            complement(94307..94378)
FT                   /gene="tRNA-Gly"
FT                   /product="transfer RNA-Gly"
FT                   /anticodon=(pos:94344..94346,aa:Gly)
FT                   /note="tRNA Gly anticodon GCC, Cove score 66.04"
FT   CDS             94629..98120
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0077"
FT                   /product="putative helicase"
FT                   /db_xref="GOA:B0BAG3"
FT                   /db_xref="InterPro:IPR014021"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAG3"
FT                   /protein_id="CAP06475.1"
FT                   /translation="MLNFRKLRRDFTANILQDGKELFAQGAVVSAKILSMNGETVCISA
FT                   QIRGSYDNVYECEIEVDRAESDTVDSNCDCSYNYDCQHVVALLFYLEQYFNEMVVTYSK
FT                   EADLSSNEEVSKELQETFVVAAIREEERRDREHQKEILREYNHAANVLSENPFFLPLEY
FT                   SEKDSAELAVLFVPQKNEGEVFSPNQPIEFQLVLRLPGRSKPFYISNIKTFLEGVLYQE
FT                   PIVFSGRRFFFTLQSFSASDRKLIDLLIRYARYATGSSEEKLLKSAFLTPASLGMILSK
FT                   MFEHQMAESGGSQLGERECFQGIFCGNLEEPLLWSVSPAKMKFHLDYFDTPYKALLMKP
FT                   LIVVDEEELQPEQAVLLESNYPGIIHKNVYHHFLPQIKRAHLRTFAGLRDIAIPEALFG
FT                   SFCENALPVFRNYAELSNVEALNVFSTLPYTEELQGVCDISYLDGELEARLFFLYDGQK
FT                   VPATSFSLQYQEVRTFVRPDGILARNLVEERKILEEVFSGFVYDERDGAFHVKSEKKIV
FT                   EFMTETIPNNQHRITFNCPETLSDQFIYDETVFDLIFRAGEDINYYEAELKVHGLLKGI
FT                   SLDLLWDCVSAKKRFLELPKKGGQLKKARRGKASASKLPCILVLDLEKIAPVIQIFNEI
FT                   GFQVLDDFVEKCPLWGLSGISPESFKDLPVNFSMTEDLAEIQKQIRGEVDFEFQEVPSQ
FT                   IQATLRGYQKEGVHWLERLRKMHLNGILADDMGLGKTLQTIIAVTQSRLEKGGGCSLII
FT                   CPTSLVYNWKEEFRKFNPEFKTLVVDGIPSQRRKQLASLEEYDVAITSYNLLQKDIDIY
FT                   KDFLFDYVVLDEAHHIKNRTTRNAKSVKMIRACHRLILTGTPIENSLEELWSLFDFLMP
FT                   GLLSSYDRFVGKYIRIGNYMGNKADNVEALRRKVAPFILRRMKEDVLEDLPPVSEILYH
FT                   CHLTESQRELYQSYAASARQELSRLVKQEGFERIHIHVLATLTRLKQICCHPAIFAKDT
FT                   PEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKN
FT                   RLEIVQQFNEDPGLLVFLVSLKAGGTGLNLVGADTVIHYDMWWNPAVENQATDRVHRIG
FT                   QSRSVSSYKLVTLNTIEEKILSLQNRKKGLVKKVINSDDEVVSKLTWEEVLELLQI"
FT   misc_feature    94791..94904
FT                   /note="HMMPfam hit to PF04434, SWIM zinc finger, score
FT                   3.8e-07"
FT                   /inference="protein motif:HMMPfam:PF04434"
FT   misc_feature    96714..97196
FT                   /note="HMMPfam hit to PF04851, Type III restriction
FT                   enzyme,res subunit, score 1.7e-05"
FT                   /inference="protein motif:HMMPfam:PF04851"
FT   misc_feature    96732..97583
FT                   /note="HMMPfam hit to PF00176, SNF2 family N-terminal
FT                   domain, score 5.5e-87"
FT                   /inference="protein motif:HMMPfam:PF00176"
FT   misc_feature    97719..97949
FT                   /note="HMMPfam hit to PF00271, Helicase conserved
FT                   C-terminal domain, score 1.2e-26"
FT                   /inference="protein motif:HMMPfam:PF00271"
FT   CDS             98125..99225
FT                   /transl_table=11
FT                   /gene="mreB"
FT                   /locus_tag="CTLon_0078"
FT                   /product="Cell shape determining protein"
FT                   /db_xref="GOA:B0BAG4"
FT                   /db_xref="InterPro:IPR004753"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAG4"
FT                   /protein_id="CAP06476.1"
FT                   /translation="MSPYRSLYKIKHLSNRLYNKALGRFDRVFNFFSGNVGIDLGTANT
FT                   LVYVRGRGIVLSEPSVVAVDAQTHAVLAVGHKAKAMLGKTPRKIVAVRPMKDGVIADFE
FT                   IAEGMLKALIKRVTPARSMFRPKILIAVPSGITGVEKRAVEDSALHAGAQEVILIEEPM
FT                   AAAIGVDLPVHEPAASMIIDIGGGTTEIAIISLGGIVESRSLRIAGDEFDECIINYMRR
FT                   TYNLMIGPRTAEEIKITIGSAYPLGDQELEMEVRGRDQVAGLPITKRINSVEIRECLAE
FT                   PIQQIIECVRLTLEKCPPELSADLVERGMVLAGGGALIKGLDKALSKNTGLSVITAPHP
FT                   LLAVCLGTGKALEHLDQLKKRKESLV"
FT   misc_feature    98221..99204
FT                   /note="HMMPfam hit to PF06723, MreB/Mbl protein, score
FT                   1.1e-229"
FT                   /inference="protein motif:HMMPfam:PF06723"
FT   misc_feature    98356..98379
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    98659..99168
FT                   /note="HMMPfam hit to PF02491, Cell division protein
FT                   FtsA,score 0.00014"
FT                   /inference="protein motif:HMMPfam:PF02491"
FT   CDS             99222..101021
FT                   /transl_table=11
FT                   /gene="pckA"
FT                   /locus_tag="CTLon_0079"
FT                   /product="phosphoenolpyruvate carboxykinase (GTP)"
FT                   /db_xref="GOA:B0BAG5"
FT                   /db_xref="InterPro:IPR018091"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAG5"
FT                   /protein_id="CAP06477.1"
FT                   /translation="MTGDWISKITHSGLKSWIEEVIALVSPDDVRLCDGSEAEYQQLCQ
FT                   QMQDAGVMTPLNPELHPNCFLVRSSPSDVARAEQFTFICTKTQEEAGPTNNWRDPQEMR
FT                   AELHALFRGCMRGRTLYIVPFCMGPLNSPFSLIGVEITDSPYVVCSMKIMTRMGASVLA
FT                   MLGSNGTFYKCLHSVGKPLAPGEKDVAWPCDPEHMRIVHFQDDSSVMSFGSGYGGNALL
FT                   GKKCVALRLASYLGHQQGWLAEHMLIIGVTNPEGRKKYFAAAFPSACGKTNLAMLMPKL
FT                   PGWKVECIGDDIAWIRPGNDGRLYAVNPEFGFFGVALGTSETTNPHALATCHADSLFTN
FT                   VALTADGDVWWEGKTTTPPQGMIDWKGRAWVSGGEPAAHPNARFTAPLDHCPSLDPQWN
FT                   NPQGVPLEAVIFGGRRTETIPLVYEALSWEHGVMMGAGMSSTTTAAIVGELGKLRHDPF
FT                   AMLPFCGYNMAAYFEHWLSFATKGLQLPRIFGVNWFRKDEHGQFIWPGFSENLRVLEWI
FT                   FRRTDGEDAIAHRTPVGYLPTAEGLNTSGLDLSEDALRALLTVDAQGWKAEVSNIRKYC
FT                   SIFGADMPQRILEELSRIESELK"
FT   misc_feature    99267..101012
FT                   /note="HMMPfam hit to PF00821, Phosphoenolpyruvate
FT                   carboxykinase, score 0"
FT                   /inference="protein motif:HMMPfam:PF00821"
FT   misc_feature    100014..100040
FT                   /note="PS00505 Phosphoenolpyruvate carboxykinase (GTP)
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00505"
FT   misc_feature    100524..100571
FT                   /note="PS00012 Phosphopantetheine attachment site."
FT                   /inference="protein motif:Prosite:PS00012"
FT   CDS             101133..103436
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0080"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR007606"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAG6"
FT                   /protein_id="CAP06478.1"
FT                   /translation="MSIQPTSISLTKNITAALAGEQVDAAAVYMPQAVFFFQQLDEKSK
FT                   GLKRALGLLEEVDLEKFIPSLEKSPTPITTGTTSKISADGIEIVGELSSETILADPNKA
FT                   AAQVFGEGLADSFDDWLRLSENGGIQDPTAIEEEIVTKYQTELNTLRNKLKQQSLTDDE
FT                   YTKLYAIPQNFVKEIESLKNENNVRLIPKSKVTNFWQNIMLTYNSVTSLSEPVADAMNT
FT                   TMTEYSLYIERATEAAKLIREITNTIKDIFNPVWDVREQTGIFRLKGAEYNALEGNMIQ
FT                   SLLSFAGLFRQLMSRTATVDEIGALYPKNDKNEDVIHTAIDDYVNSLADLKANEQVKLN
FT                   GLLSLVYAYYASTLGFAKKDVFNNAQASFTDYTNFLNQEIQYWRPRETSSFNISNQALR
FT                   TFKNKPSADYNGVYLFDNKGLATNLFNPTFFFDVVSLMTADPTKTMSRQDYNKVITASE
FT                   SSIQKINQAITAWELAIAECGTKKAKLEPSSLNYFNAMVEAKKTFVETSPIQMVYSSLM
FT                   LDKYLPNQQYILETLGSQMTFSNKAARYLNDIIAHAVSFQTANVYYSLGMYLRQMNQQE
FT                   FPEVISRANDTVKKEIDRSRADLFHCKKAIEKIKELVTSVNADTELTSSQRAELLETLA
FT                   SYAFEFENLYHNLSNVYVMVSKVQISGVSMPDEVDEAFTAKIGSKEFDTWIQQLTTFES
FT                   AVIEGGRNGVMPGGEQQVLQSLESKQQDYTSFNQNQQLALQMESAAIQQEWTMVAAALA
FT                   LMNQIFAKLIRRFK"
FT   misc_feature    102243..103427
FT                   /note="HMMPfam hit to PF04518, Protein of unknown
FT                   function,DUF582, score 8.8e-200"
FT                   /inference="protein motif:HMMPfam:PF04518"
FT   CDS             103463..104635
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0081"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR007606"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAG7"
FT                   /protein_id="CAP06479.1"
FT                   /translation="MRNHPIPEGQKYFVPTIETAAPRERRVSPAEVAADYTQLHEAATY
FT                   LQVFQDLLNDAHQLGLNKEFVESLRQDFLKTGSEMSLMQALWTEESQREARKRERKELQ
FT                   QQLESKVLGPQALTTAKELHPVDDSIVNKMPFQSAFAYILLDKYIPAQEEALYALAREL
FT                   NFSGYAQTLFSPVLELVKSFNNAPIVYNLGSYIGQTAGTANFKYGYQMVLDRYETETGQ
FT                   LRKDIKNAENAKQQLAQIIKNVEANNSLTTEHKTQLKDMANGYIQTLDVCISQMQELST
FT                   GLRGLSFIPGRDEYNPAYEIMGSSFSVVTLQNLEGKVVDGEINISSGETKGGLLNFFTY
FT                   FLADVQNFGDLAQTNQLMLELQMRAMHQQWSLVTASLKLLHNVYRTLASS"
FT   misc_feature    103463..104632
FT                   /note="HMMPfam hit to PF04518, Protein of unknown
FT                   function,DUF582, score 2.5e-192"
FT                   /inference="protein motif:HMMPfam:PF04518"
FT   CDS             complement(104701..105723)
FT                   /transl_table=11
FT                   /gene="ompB"
FT                   /gene_synonym="porB"
FT                   /locus_tag="CTLon_0082"
FT                   /product="outer membrane protein B"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAG8"
FT                   /protein_id="CAP06480.1"
FT                   /translation="MSSKLVNYLRLTFLSFLGIASTSLDAMPAGNPAFPVIPGINIEQK
FT                   NACSFDLCNSYDVLSALSGNLKLCFFGDYIFSEEAQVKDVPVVTSVTTAGIGPSPNITS
FT                   TTKTRNFDLVNCNLNANCVAAAFSLPDRSLSAIPLFDVSFEVKVGGLKQYYRLPMNAYR
FT                   DFTSEPLNSESEVTDGMIEVQSNYGFVWDVSLKKVIWKDGVSFVGVGADYRHASCPIDY
FT                   IIANSQANPEVFIADSDGKLNFKEWSVCVGLTTYVNDYVLPYLAFSIGSVSRQAPDDSF
FT                   KKLEDRFTNLKFKVRKITSSHRGNICIGATNYIADNFFYNVEGRWGSQRAVNVSGGFQF
FT                   "
FT   sig_peptide     complement(105646..105723)
FT                   /gene="ompB"
FT                   /locus_tag="CTLon_0082"
FT                   /note="Signal peptide predicted for CTL0082 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.992) with cleavage site
FT                   probability 0.972 between residues 26 and 27"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(105857..106861)
FT                   /transl_table=11
FT                   /gene="gpdA"
FT                   /locus_tag="CTLon_0083"
FT                   /product="glycerol-3-phosphate dehydrogenase [NAD(P)+]"
FT                   /db_xref="GOA:B0BAG9"
FT                   /db_xref="InterPro:IPR006109"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAG9"
FT                   /protein_id="CAP06481.1"
FT                   /translation="MKETIAYLGMGMWGFSLANLLANNGHRVVGWARNPALIEQLSVQR
FT                   RHPAAPHISIPQNLSFTSHMEEALDGATMIVEGVTSAGMRPVLTQLKALTELRVPLVIT
FT                   SKGIEQNTGLLLSEIALEIFGRPAAQHLGYLSGPSIASEVLRGCPCSVVISAYNPDTLK
FT                   QIHRAFLTPTFRVYPNSDLKGVALGGALKNVIAIACGISDGFRFGDNAKSGLVTRGLHE
FT                   IRKFATIMGCRPDTLNGLAGLGDLCTTCFSAFSRNTLFGKLLAEGLTPEQAKTKIGMVV
FT                   EGVYTALSAHQIATHHRIDMPITTSVYRVLYENLDIQEGIAQLLQRDTKEEYL"
FT   misc_feature    complement(105890..106324)
FT                   /note="HMMPfam hit to PF07479, NAD-dependent
FT                   glycerol-3-phosphate deh, score 5e-81"
FT                   /inference="protein motif:HMMPfam:PF07479"
FT   misc_feature    complement(106373..106855)
FT                   /note="HMMPfam hit to PF01210, NAD-dependent
FT                   glycerol-3-phosphate deh, score 1.1e-65"
FT                   /inference="protein motif:HMMPfam:PF01210"
FT   CDS             complement(106858..108225)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0084"
FT                   /product="UDP-N-acetylglucosamine pyrophosphorylase"
FT                   /db_xref="GOA:B0BAH0"
FT                   /db_xref="InterPro:IPR002618"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH0"
FT                   /protein_id="CAP06482.1"
FT                   /translation="MTDSSYVDLSFLLDQLLPIQQEHLLEYWPSLSPQQRLRLGTQIAQ
FT                   IDIPFFLRQQALLQNPQASHQEYTPLSPVHYAGDNPAYAQLGFQLLQRGKVGCVVLAGG
FT                   QGSRLKFDGPKGLYPVSSVKKKPLYQLVAEKVAAASKWVGRPLPLAIMTSPLNHKQTLS
FT                   YFATNDYFNLSPSQVDFFCQPLWPLLSLSGDLFLESEDRLSLGPTGNGCLSTLLQSSGI
FT                   WDKWHQAGIEMVSVIPIDNPLALPFDRELVGFHAAEHNDVTIKTTLRQSAQEDVGVLIE
FT                   LAKQKIAVVEYSTLTTKERCAKTTEGDLTYKLANIGLYCLSMDFLAQTAYQPLPLYKAN
FT                   KHAKQLHPSTTEKNAWKFEEFIFDLFQYSEHSQAIVYPRHECFAPLKNYEGNHSPATVR
FT                   EAMRKREHALFTAVTERKLSPNTIFELEADFYYPSSHTSLEWETKIFFQETIIEAS"
FT   misc_feature    complement(106906..108093)
FT                   /note="HMMPfam hit to PF01704, UTP--glucose-1-phosphate
FT                   uridylyltransferase, score 8.9e-08"
FT                   /inference="protein motif:HMMPfam:PF01704"
FT   CDS             complement(108237..108602)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0085"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH1"
FT                   /protein_id="CAP06483.1"
FT                   /translation="MNKKLQDLSKLLTIELFKKRTRLETVKKALSTIEHRLQQIQEHIA
FT                   KISLTRHKQFLCRSYTHEYDQHLEHLQREQTSLYKQHQALKTSLKDAYGDIQKQLDQRK
FT                   IIEKIHDSKYPIKSANN"
FT   CDS             complement(108595..109899)
FT                   /transl_table=11
FT                   /gene="fliI"
FT                   /locus_tag="CTLon_0086"
FT                   /product="flagellum-specific ATP synthase"
FT                   /db_xref="GOA:B0BAH2"
FT                   /db_xref="InterPro:IPR020003"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH2"
FT                   /protein_id="CAP06484.1"
FT                   /translation="MTHLQEETLLIHQWRPYRECGILSRISGSLLEAQGLSACLGELCQ
FT                   ISLSRSDPILAEVIGIHNRTTLLLALTPIYYLAIGAEVVPLRRPASLPLSNHLLGRVLD
FT                   GFGNPLDGGSQLPKTNLSPLFSSPSSPMSRTPIQEVFPTGIRAIDALLTIGEGQRVGIF
FT                   SEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIASTAY
FT                   ETAASKVIAGRAAITIAEYFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHHYAA
FT                   SVFHHVAEFLERAGNNDKGSITSFYAILHYANHPDIFTDYVKSLLDGHFFLSPQEKSFS
FT                   SPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAHLDRA
FT                   IRLLPSVKQFLSQPYSHYSAIHETIEQLCQLLKHE"
FT   misc_feature    complement(108847..108876)
FT                   /note="PS00152 ATP synthase alpha and beta subunits
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00152"
FT   misc_feature    complement(108847..109473)
FT                   /note="HMMPfam hit to PF00006, ATP synthase alpha/beta
FT                   family, nucleot, score 5.2e-89"
FT                   /inference="protein motif:HMMPfam:PF00006"
FT   misc_feature    complement(109639..109833)
FT                   /note="HMMPfam hit to PF02874, ATP synthase alpha/beta
FT                   family, beta-ba, score 0.00025"
FT                   /inference="protein motif:HMMPfam:PF02874"
FT   CDS             complement(109973..110497)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0087"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH3"
FT                   /protein_id="CAP06485.1"
FT                   /translation="MEDYVASPHLRSLACLDNPQLPIETPLFEQKALSHELLSLIQVFR
FT                   KLSVHLLSEIEKLSQKLKPELLELAVLVCEKFLYRKLACTEELALLISAALQHHLATYA
FT                   VSPIKIGLHPEDLSNLSKWLILHDVPLLKNIEFIADPLCKKASYKIELPSGILRQDIGE
FT                   ELSHLLSVLTP"
FT   CDS             complement(110502..111506)
FT                   /transl_table=11
FT                   /gene="fliF"
FT                   /locus_tag="CTLon_0088"
FT                   /product="flagellar M-Ring Protein"
FT                   /db_xref="GOA:B0BAH4"
FT                   /db_xref="InterPro:IPR006182"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH4"
FT                   /protein_id="CAP06486.1"
FT                   /translation="MPVLPRFLKNKIASTKSLGYLLAAILIGFIMLYKPSSPQPTPTVA
FT                   STEKKPSHWLKLSHLGNLQSIEIQAKKEQLEKDLTLFEPVLQATVALSQEEDSLAEISV
FT                   ILSLPQASTLSPSLVHSITDYLTRSVPGLTKEHITLSDQHGNLYSPLFEQSNTLLTTSL
FT                   ERSLQTILPQTHFALNYIPVADEGHLQLLVDEDYLNTLPKGARVKLLSHMQEILSAFSE
FT                   MHPSVDIVPFLKPVAHKTSRLSSIVLSITIVLLSLGILGFATFYLAFHTYDHVSQQKEK
FT                   IQSINIPKLIEMMKRESPEKVALILSYLDSAKAEELLNKLPEEMKSAVLKLRT"
FT   misc_feature    complement(110700..110768)
FT                   /note="1 probable transmembrane helix predicted for CTL0088
FT                   by TMHMM2.0 at aa 247-269"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(111372..111506)
FT                   /gene="fliF"
FT                   /locus_tag="CTLon_0088"
FT                   /note="Signal peptide predicted for CTL0088 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.946) with cleavage site
FT                   probability 0.891 between residues 45 and 46"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(111780..112562)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0089"
FT                   /product="conserved hypothetical protein"
FT                   /note="note the NifU-like protein domains:
FT                   PF01592;NifU-like N terminal domain and PF01106, NifU-like
FT                   domain"
FT                   /db_xref="GOA:B0BAH5"
FT                   /db_xref="InterPro:IPR002871"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH5"
FT                   /protein_id="CAP06487.1"
FT                   /translation="MMIPFYPFPLWGSFPARSLRFFFQPKHGGALSHDQEDEEIQLVIG
FT                   KQGHLLMGNTLLFYWLVDKTNGIIREAKFQYFGHPYLLVLAEATCSLVIGKTFAEAYKI
FT                   TINDLDQEVRGHAHPSIFLEDLSPLYHLVIDALDIAIEQCVDIPVNDSPFPFKDALSQL
FT                   SEGNPYSTEEWGALSHDEQLSALNTMMKEKIAPLVAVDSGDVRIVHFEGLTVTIAYSGN
FT                   CSSCLSSVGSTLNSIGQLFRAHVYPLLEIKVDEQSLLF"
FT   misc_feature    complement(111801..111989)
FT                   /note="HMMPfam hit to PF01106, NifU-like domain, score
FT                   9.3e-05"
FT                   /inference="protein motif:HMMPfam:PF01106"
FT   misc_feature    complement(112110..112508)
FT                   /note="HMMPfam hit to PF01592, NifU-like N terminal
FT                   domain,score 1.3e-06"
FT                   /inference="protein motif:HMMPfam:PF01592"
FT   CDS             complement(112559..113713)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0090"
FT                   /product="Cysteine desulfurase (EC 2.8.1.7)"
FT                   /db_xref="GOA:B0BAH6"
FT                   /db_xref="InterPro:IPR000192"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH6"
FT                   /protein_id="CAP06488.1"
FT                   /translation="MDGTKIHETRSFSWLNNQQAIPPSEMVKEAFQRYADVFSYSANTS
FT                   ILTLQAEAEASARKLTGCQEKAFTFHFILHYPNVTAIIVAALLENQNAFQGRNHLLVPS
FT                   CEQQFIINALCRRQNLGTTYDWVTSKNGRVKESDLAEALSPRTLLFSISAANGMTGFLE
FT                   AIPELAALCKERGVIFHIDLSDILGRCALPAELYQADILTFSSQSLGGIGPSGAMFISP
FT                   ALTKYFSLWLPSNPQVPTCLSSLAAFSLACQERTTAFSSLVLSAISSRAALKQALSAIP
FT                   QVEFLLEDSAPRLPNVAVFAIPGIPAESLGFFLSQKNIFVGLGYERFQPLSQILQSSGI
FT                   SPFLCHSALHVSFTERTPTTHFSALATALQEGISHLQPLVTQSL"
FT   misc_feature    complement(112667..113647)
FT                   /note="HMMPfam hit to PF00266, Aminotransferase
FT                   class-V,score 4.5e-07"
FT                   /inference="protein motif:HMMPfam:PF00266"
FT   CDS             complement(113668..114348)
FT                   /transl_table=11
FT                   /gene="pgmA"
FT                   /locus_tag="CTLon_0091"
FT                   /product="phosphoglycerate mutase"
FT                   /db_xref="GOA:B0BAH7"
FT                   /db_xref="InterPro:IPR005952"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAH7"
FT                   /protein_id="CAP06489.1"
FT                   /translation="MTLLILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKH
FT                   LPIDCIFTSTLVRSLMTALLAMTNHSSQKVPYIVHEERPDMSRIHSQKEMEQMIPLFQS
FT                   SALNERMYGELQGKNKQEVAAQFGEEQVKLWRRSYRIAPPQGESLFDTGQRTLPYFQER
FT                   IFPLLQQGKNIFISAHGNSLRSLIMDLEKLSEEQVLSLELPTGQPIVYEWTGQKFTKHA
FT                   PSLG"
FT   misc_feature    complement(113791..114342)
FT                   /note="HMMPfam hit to PF00300, Phosphoglycerate mutase
FT                   family, score 1.4e-38"
FT                   /inference="protein motif:HMMPfam:PF00300"
FT   misc_feature    complement(114304..114333)
FT                   /note="PS00175 Phosphoglycerate mutase family
FT                   phosphohistidine signature."
FT                   /inference="protein motif:Prosite:PS00175"
FT   CDS             114643..115368
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0092"
FT                   /product="ribosomal large subunit pseudouridine synthase B"
FT                   /db_xref="GOA:B0BAH8"
FT                   /db_xref="InterPro:IPR018496"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH8"
FT                   /protein_id="CAP06490.1"
FT                   /translation="MAKVRLNKFLASAGVASRRKCDEIIFAGSVTVNGRAATGPFVTVD
FT                   EEFDSVEVGGQRIGAEKKVYFMVHKPLGYLCSSERKFPGSKLVIDLLSHCPYRLFTVGR
FT                   LDKETSGLILVTNDGEFANRVIHPSFGITKEYLLKVSRDVTARDLETLMAGTVIDGKVV
FT                   RPVSVKKVRRGTIKIIVNEGKKHEIRLFAEAAGLQLLELKRIRIGSLVLGGLPYGKYRE
FT                   LTDSELDSCLSGKSVALVA"
FT   misc_feature    114643..114810
FT                   /note="PS00430 TonB-dependent receptor proteins signature
FT                   1."
FT                   /inference="protein motif:Prosite:PS00430"
FT   misc_feature    114652..114795
FT                   /note="HMMPfam hit to PF01479, S4 domain, score 2.8e-09"
FT                   /inference="protein motif:HMMPfam:PF01479"
FT   misc_feature    114832..115224
FT                   /note="HMMPfam hit to PF00849, RNA pseudouridylate
FT                   synthase, score 1e-30"
FT                   /inference="protein motif:HMMPfam:PF00849"
FT   misc_feature    114949..114993
FT                   /note="PS01149 Rsu family of pseudouridine synthase
FT                   signature."
FT                   /inference="protein motif:Prosite:PS01149"
FT   CDS             115487..116011
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0093"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAH9"
FT                   /protein_id="CAP06491.1"
FT                   /translation="MLFWGIFSLCLGGLFGGYCRLRYTAKALLLSWRQLLRLALKKREV
FT                   LQEIAALQTFPLLRLEEEIAFLKQGSSYSLKEFLKASDADGVTFYEMERFFTLRLKQTL
FT                   ASLQESLHQEAVQHLMEELLAYENAFSFEAFAFEKAAETYTTLHGHPVIRFSGKLFRFP
FT                   QISFPPLDEAI"
FT   CDS             116038..116592
FT                   /transl_table=11
FT                   /gene="birA"
FT                   /locus_tag="CTLon_0094"
FT                   /product="biotin operon repressor"
FT                   /db_xref="GOA:B0BAI0"
FT                   /db_xref="InterPro:IPR004408"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI0"
FT                   /protein_id="CAP06492.1"
FT                   /translation="MKEIYYEIARTESTNTTAKEGLSLWDPYALTVITTREQTAGRGKF
FT                   GRVWHSTDQDLLASFCFFLSVNNVDSALLFRIGTEAVMRLGESLGIQEAVMKWPNDVLV
FT                   QGKKLSGVLCETIPVKTGTCVIIGIGVNGNVGADELLGINQPATSLQELIGRPVDMEEQ
FT                   LKRLTKEIKHLIQTLPLWGRE"
FT   misc_feature    116059..116352
FT                   /note="HMMPfam hit to PF03099, Biotin/lipoate A/B protein
FT                   ligase famil, score 2.1e-23"
FT                   /inference="protein motif:HMMPfam:PF03099"
FT   CDS             complement(116599..117738)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0095"
FT                   /product="cell cycle protein"
FT                   /db_xref="GOA:B0BAI1"
FT                   /db_xref="InterPro:IPR018365"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI1"
FT                   /protein_id="CAP06493.1"
FT                   /translation="MKKTKYLRQVNLWVFVVIILLMSISVIVISSQDPSSMLVHTSRGL
FT                   FSAKSKKQLDHFALGWCAYFICLYVDYHQFKRWAWVLYSLILFSLIGLFFVPAVQNVHR
FT                   WYRIPIINLSVQPSEYAKLAVVIMLSYILEMRKARISSKTTAFVACIIVGIPFLLILKE
FT                   PDLGTALVLCPIALTIFYLGNIYPPLVKVCSVLVALGMFCSLLIFSGIIPHDKVKPYAL
FT                   KVLKEYQYERLSPSNHHQRASLISIGVGGLKGQGWKSGEFAGRGWLPYGYTDSVFPAIG
FT                   EEFGLLGLLFVLWLFYNLVCFGCRTVAVAVDDFGRFLAGGVTVHLVMHVLINVSMMSGL
FT                   LPITGVPLVLISYGGSSVISTMASLGILQSIYSRRFAKY"
FT   misc_feature    complement(116608..117705)
FT                   /note="HMMPfam hit to PF01098, Cell cycle protein, score
FT                   2.2e-48"
FT                   /inference="protein motif:HMMPfam:PF01098"
FT   misc_feature    complement(order(116635..116703,116731..116799,
FT                   116836..116904,117097..117165,117184..117243,
FT                   117256..117309,117442..117510,117652..117705))
FT                   /note="8 probable transmembrane helices predicted for
FT                   CTL0095 by TMHMM2.0 at aa 12-29, 77-99,
FT                   144-161,166-185,192-214, 279-301, 314-336 and 346-368"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(116638..116685)
FT                   /note="PS00012 Phosphopantetheine attachment site."
FT                   /inference="protein motif:Prosite:PS00012"
FT   misc_feature    complement(116668..116742)
FT                   /note="PS00428 Cell cycle proteins ftsW / rodA / spoVE
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00428"
FT   sig_peptide     complement(117649..117738)
FT                   /locus_tag="CTLon_0095"
FT                   /note="Signal peptide predicted for CTL0095 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.990) with cleavage site
FT                   probability 0.575 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(117830..119809)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0096"
FT                   /product="cation transporting ATPase"
FT                   /db_xref="GOA:B0BAI2"
FT                   /db_xref="InterPro:IPR018303"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI2"
FT                   /protein_id="CAP06494.1"
FT                   /translation="MSPQLFSSPFSRELLSDFFESGMAEENSPLLSQKNRRLSQNLTLK
FT                   SAYISLALYLGSLLSHWIGYQALSSLLLILTFFLAGTPALIKSFEDILDRTVNIDILMT
FT                   SAAFGSIFIGGALEGALLLVLFAISESLGAMVSGKAKSTLASLKHLAPTVAWVVQQDGS
FT                   LQKVLVQNVKIGEIIRVKSGEVVPLDGKIIHGASSINLMHLTGEKIPKSCGIGDTIPAG
FT                   AHNLEGSFDLQVLRIGAESTIAHIINLVVQAQSSKPKLQQRLDRYSSTYALTIFAISAC
FT                   IAIGGSLFTTLPFLGPDSAFYRALAFLIAASPCALIIAIPIAYLSAINACAKHGVLLKG
FT                   GVVLDRLVSCNSVVMDKTGTLTTGDLTCSGCEDFGPESPLFYSCVLAMEQSSSHPIAQA
FT                   IVNYLTEKQVRSLPATQCTTIPGEGVSGEFNGEQAFVGRVSTALRYVPEEYREQLRERA
FT                   QQAQERGDTCSIACLGKRVSLFYFRDVPRHDAANIVSYLKKNGYPVCMLTGDHRISAEN
FT                   TARLLGIDEVFYDLTPDNKLSKIQELAKSRQIMMIGDGINDAPALAQATVGIAMGEAGS
FT                   ATAIEAADVVLLNQGLSSLPWLIDKAKKTRRIVSQNLALALAIILFISGPASMGVIPLW
FT                   LAVILHEGGTVIVGLNALRLLKNT"
FT   misc_feature    complement(order(117851..117919,117929..117988,
FT                   118832..118900,118943..119011,119426..119494,
FT                   119552..119611,119615..119674))
FT                   /note="7 probable transmembrane helices predicted for
FT                   CTL0096 by TMHMM2.0 at aa 46-65, 67-86,
FT                   106-128,267-289,304-326, 608-627 and 631-653"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(118085..118762)
FT                   /note="HMMPfam hit to PF00702, haloacid dehalogenase-like
FT                   hydrolase, score 3.1e-33"
FT                   /inference="protein motif:HMMPfam:PF00702"
FT   misc_feature    complement(118088..118156)
FT                   /note="PS01229 Hypothetical cof family signature 2."
FT                   /inference="protein motif:Prosite:PS01229"
FT   misc_feature    complement(118724..118744)
FT                   /note="PS00154 E1-E2 ATPases phosphorylation site."
FT                   /inference="protein motif:Prosite:PS00154"
FT   misc_feature    complement(118772..119449)
FT                   /note="HMMPfam hit to PF00122, E1-E2 ATPase, score 1.6e-50"
FT                   /inference="protein motif:HMMPfam:PF00122"
FT   CDS             complement(119833..120579)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0097"
FT                   /product="putative integral membrane protein"
FT                   /db_xref="InterPro:IPR008217"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI3"
FT                   /protein_id="CAP06495.1"
FT                   /translation="MASEYEHFGNLSPEDHVKEVQDLHKVCKGEPHQTKKGYWYHLTCD
FT                   AIDCGVVLFFIRTIFFLVPAIPVTSYGKILFATGISWIFYTSCKRAQAAWAYIELTHRN
FT                   MLQEKKEIETNPEQERIELAVLYANQGFQEPLISQMLDFVCSDSSLLLSTMLREELHIQ
FT                   LEDYPHPLKQGNVKALGGILGLLLFAPITLAVSYTIAAILASFMIGVLFAVKTRLIKNA
FT                   ITPAIVWGVGMFITAISLCCSLIRLF"
FT   misc_feature    complement(order(119845..119913,119971..120039,
FT                   120325..120393))
FT                   /note="3 probable transmembrane helices predicted for
FT                   CTL0097 by TMHMM2.0 at aa 63-85, 181-203 and 223-245"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(120616..121902)
FT                   /transl_table=11
FT                   /gene="serS"
FT                   /locus_tag="CTLon_0098"
FT                   /product="seryl-tRNA synthetase"
FT                   /db_xref="GOA:B0BAI4"
FT                   /db_xref="InterPro:IPR015866"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAI4"
FT                   /protein_id="CAP06496.1"
FT                   /translation="MLDIRLIRKEPKECESRLQKKDPAISLERLLDLDKTVRQLKADSE
FT                   ALLAKRKVLSGQIHKAKVANENADALIQEVNTIADQLVAFETTLQEQEALLEDLMARLP
FT                   NYPDEDVPVSPDKTGNQMIKSHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWP
FT                   AYCNEGVLLEWALLTYLLNKQQAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDG
FT                   DRSLFLIPTAEVVLNGFHSQEILNEQDLPLCYAAFTPCFRREAGAGGAHERGLVRVHQF
FT                   HKVEMFAFTTPEQEEVVYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVW
FT                   LPGQKAFYEVSSISKCGDFQARRSETRYRDAQGKLHFVNTLNGSGLATPRLLVAILENY
FT                   QQADGSVVIPSVLRPYMNNQEILLPKTVR"
FT   misc_feature    complement(120871..121389)
FT                   /note="HMMPfam hit to PF00587, tRNA synthetase class II
FT                   core domain (G,, score 2.4e-62"
FT                   /inference="protein motif:HMMPfam:PF00587"
FT   misc_feature    complement(121048..121122)
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT                   /inference="protein motif:Prosite:PS00179"
FT   misc_feature    complement(121582..121902)
FT                   /note="HMMPfam hit to PF02403, Seryl-tRNA synthetase
FT                   N-terminal domain, score 7.6e-33"
FT                   /inference="protein motif:HMMPfam:PF02403"
FT   CDS             121944..123071
FT                   /transl_table=11
FT                   /gene="ribD"
FT                   /locus_tag="CTLon_0099"
FT                   /product="Riboflavin biosynthesis protein
FT                   (diaminohydroxyphosphoribosylaminopyrimidine deaminase)"
FT                   /db_xref="GOA:B0BAI5"
FT                   /db_xref="InterPro:IPR016192"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI5"
FT                   /protein_id="CAP06497.1"
FT                   /translation="MEVLSEQQLFFMRKAVALGEKGRIFAPPNPWVGCVIVKNGCVIGE
FT                   GWHQGIGSPHAEVCAVQDQKCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVG
FT                   LLDPDPRVCKKGVARLQAAGIPVYVGVGSQEAKTSLQPYLYQRERGLPWVVMKTAASLD
FT                   GQTADRGGSSQWISGELARADVGKLRAESQAIIVGARTVCLDNPRLSARFPHGDLYERQ
FT                   PLRVVVDSRGTVPLESRVFDLSSGSTLFATTQQCPKEYIQKLKDLGVEVWESSSHQVDL
FT                   KGLLRYLAERGCLQVLVEGGAQLHSAFWQQKLVNAGVIYWGPKFLGDQGQPMLRDLQLS
FT                   LVTAEHVRITETSLVRDSVKTCFECLEQESVDKKG"
FT   misc_feature    121956..122258
FT                   /note="HMMPfam hit to PF00383, Cytidine and deoxycytidylate
FT                   deaminas, score 2.9e-40"
FT                   /inference="protein motif:HMMPfam:PF00383"
FT   misc_feature    122106..122222
FT                   /note="PS00903 Cytidine and deoxycytidylate deaminases
FT                   zinc-binding region signature."
FT                   /inference="protein motif:Prosite:PS00903"
FT   misc_feature    122397..123032
FT                   /note="HMMPfam hit to PF01872, RibD C-terminal domain,score
FT                   4.4e-95"
FT                   /inference="protein motif:HMMPfam:PF01872"
FT   CDS             123181..124455
FT                   /transl_table=11
FT                   /gene="ribA"
FT                   /locus_tag="CTLon_0100"
FT                   /product="GTP cyclohydrolase II"
FT                   /db_xref="GOA:B0BAI6"
FT                   /db_xref="InterPro:IPR017945"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI6"
FT                   /protein_id="CAP06498.1"
FT                   /translation="MFTYEAGIASVQQAIKDVAEGKFVIVIDAASRENEGDLILAGEKV
FT                   STEKMSFLLSHTTGIVCASLSREQAKSLDLPAMVQDNQCAFKTAFTVSVDASSGVTTGV
FT                   SASDRTRTVQLLADPAATAESFVRPGHVFPLISQPGGVVQRPGHTEAAMDLMRLAGMQP
FT                   CGIFAELVNPDHSMMRQQQVLAFAEQHDLTVITVDDLITYRYTYDSLVTKISSARLPTK
FT                   YGDFSIYVYESIIDGTQHFALVKGDIHEQEAVPVRVHSECLTGDILGSCRCDCGAQLDM
FT                   AMRYIAEEGLGVIVYLRGQEGRGIGFGHKIRAYALQDLGYDTVDANLQLGFPIDAREYG
FT                   MAAQVLKDLQLTSVRLITHNPRKFFELQRLGIHVLDRIILPVSISTENEGYLRTKKERM
FT                   GHWLDLPVLDDVEEEYETVERMSCR"
FT   misc_feature    123181..123471
FT                   /note="PS00430 TonB-dependent receptor proteins signature
FT                   1."
FT                   /inference="protein motif:Prosite:PS00430"
FT   misc_feature    123211..123798
FT                   /note="HMMPfam hit to PF00926, 3,4-dihydroxy-2-butanone
FT                   4-phosphate, score 1.6e-97"
FT                   /inference="protein motif:HMMPfam:PF00926"
FT   misc_feature    123811..124320
FT                   /note="HMMPfam hit to PF00925, GTP cyclohydrolase II,score
FT                   6.4e-98"
FT                   /inference="protein motif:HMMPfam:PF00925"
FT   CDS             124424..124897
FT                   /transl_table=11
FT                   /gene="ribH"
FT                   /locus_tag="CTLon_0101"
FT                   /product="Riboflavin synthase beta chain
FT                   (6,7-dimethyl-8-ribityllumazine synthase)"
FT                   /db_xref="GOA:B0BAI7"
FT                   /db_xref="InterPro:IPR002180"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAI7"
FT                   /protein_id="CAP06499.1"
FT                   /translation="MKPLKGCPVAKDVRVAIVGSCFNSPIADRLVAGAQETFFDFGGDP
FT                   SSLTIVRVPGAFEIPCAIKKLLSTSGQFHAVVACGVLIQGETSHYEHIADSVAAGVSRL
FT                   SLDFCLPITFSVITAPNMEAAWERAGIKGPNLGASGMKTALEMASLFSLIGKE"
FT   misc_feature    124451..124885
FT                   /note="HMMPfam hit to
FT                   PF00885,6,7-dimethyl-8-ribityllumazine synthase, score
FT                   3.4e-40"
FT                   /inference="protein motif:HMMPfam:PF00885"
FT   CDS             complement(124948..126294)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0102"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI8"
FT                   /protein_id="CAP06500.1"
FT                   /translation="MLINFTFRNCLLFLVTLSSVPVFSAPQPRGTLPSSTTKIGSEVWI
FT                   EQKVRQYPELLWLVEPSSTGASLKSPSGAIFSPTLFQKKVPAFDIAVRSLIHLHLLIQG
FT                   SRQAYAQLIQLQTSESPLTFKQFLALHKQLTLFLNSPKEFYDSVKVLETAIVLRHLGCS
FT                   TKAVAAFKPYFSEMQRETFYTKALHVLHTFPELSPSFARLSPEQKTLFFSLRKLANYDE
FT                   LLSLTNTPSFQLLSAGRSQRALLALDLYLYALDSCGEQGMSSQFHTNFAPLQSMLQQYA
FT                   TVEEAFSRYFTYRANRLGFDGSSRSEMALVRMATLMNLSPSEAAILTTSFKTLPTEEAD
FT                   TLVNSFYTNKGDSLALSLRGLPTLVSELTRTARGNTNAEARSQQIYATTLSLVAKSLKA
FT                   HKEMLNKQILSKEIVLDFSETAASCQGLDIFSENVAVQIHLNGTVSIHL"
FT   sig_peptide     complement(126223..126294)
FT                   /locus_tag="CTLon_0102"
FT                   /note="Signal peptide predicted for CTL0102 by SignalP 2.0
FT                   HMM (Signal peptide probability 1.000) with cleavage site
FT                   probability 1.000 between residues 24 and 25"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             126679..127344
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0103"
FT                   /product="putative lipoprotein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAI9"
FT                   /protein_id="CAP06501.1"
FT                   /translation="MKKFIYKYSFGALLLLSGLSGLSSCCANSYGSTLAKNTAEIKEES
FT                   VILREKPDAGCKKKSSCYLRKFFSRKKPKEKTEPVLPNFKSYADPMTDSERKDLSFVVS
FT                   AAADKSSIALAMAQGEIKGALSRIREIHPLALLQALAEDPALIAGMKKMQGRDWVWNIF
FT                   ITELSKVFSQAASLGAFSVADVAAFASTLGLDSGTVTSIVDGERWAELIDVVIQNPAI"
FT   sig_peptide     126679..126771
FT                   /locus_tag="CTLon_0103"
FT                   /note="Signal peptide predicted for CTL0103 by SignalP 2.0
FT                   HMM (Signal peptide probability 1.000) with cleavage site
FT                   probability 0.479 between residues 31 and 32"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    126721..126753
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   CDS             127461..128828
FT                   /transl_table=11
FT                   /gene="dagA"
FT                   /locus_tag="CTLon_0104"
FT                   /product="Na(+)-linked D-alanine glycine permease"
FT                   /db_xref="GOA:B0BAJ0"
FT                   /db_xref="InterPro:IPR001463"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ0"
FT                   /protein_id="CAP06502.1"
FT                   /translation="MLQFLKQINHFLTSFCVFPLILCLGGILTWKLRGLQFTSLGMSFR
FT                   LMLNNQQEQAGAEGEGVSRYEAVAGMLAGNFGTGNIAGMAIAVASGGPGALLWIWIVTL
FT                   FAAIVQYAGAFLGCKYRQFQKESQEYIGGPIACLGYKMGSRFLAVAFCVASLITAFSAG
FT                   NLVQVNSIISLCADGVSAKIAVGILLALSVYPILAGGNTRVLRFSAKAIPFVAGFYFLF
FT                   SVIVLAMHCDKILPALQLVFSSALGVKAGIAGVGGYTLGQVISTGLNRAIMATDGGSGM
FT                   VSILQSNSKSTNPVTDGLVTLLPPVIVAVVCSITMMVLLVTGAYDSGELGVLMVMNAFK
FT                   SSLGMLGGSVVLISMILFGYTTALSWFACAEKSLEYMIPGKRANLLLKAIYIAIIPMGG
FT                   VLGMQFIWALSDLGFCGMVIFNSISLIALFREVIATRYEVALLRKEAQAQSDPLRQ"
FT   misc_feature    order(127488..127556,127659..127727,127740..127808,
FT                   127896..127964,128007..128075,128094..128147,
FT                   128175..128243,128358..128426,128484..128552,
FT                   128613..128681,128694..128762)
FT                   /note="11 probable transmembrane helices predicted for
FT                   CTL0104 by TMHMM2.0 at aa 10-32, 67-89,
FT                   94-116,146-168,183-205, 212-229, 239-261, 300-322,
FT                   342-364,385-407 and 412-434"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    127590..128810
FT                   /note="HMMPfam hit to PF01235, Sodium:alanine symporter
FT                   family, score 1.2e-18"
FT                   /inference="protein motif:HMMPfam:PF01235"
FT   CDS             128886..129338
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0105"
FT                   /product="conserved hyporthetical protein"
FT                   /note="Note the PF01161;Phosphatidylethanolamine-binding
FT                   motif"
FT                   /db_xref="InterPro:IPR008914"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ1"
FT                   /protein_id="CAP06503.1"
FT                   /translation="MQLTSQAFSYGRPIPKKYSCQGVGISPPLSFSDVPREAKSLVLIV
FT                   EDPDVPPSVREDGLWIHWIVYNLSPVVSNLAEGAQIFAVQGLNTAGEIGYCPPCPPDAK
FT                   HRYYFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELMGTYEKD"
FT   misc_feature    128901..129335
FT                   /note="HMMPfam hit to
FT                   PF01161,Phosphatidylethanolamine-binding protein, score
FT                   1.6e-58"
FT                   /inference="protein motif:HMMPfam:PF01161"
FT   CDS             complement(129347..130006)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0106"
FT                   /product="SET domain containing protein"
FT                   /db_xref="InterPro:IPR001214"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ2"
FT                   /protein_id="CAP06504.1"
FT                   /translation="MTTNSTQDTLYLSLHGGIDSAIPYPVRRVEQLLQFSFLPELQFQN
FT                   AAVKQRIQRLCYREEKRLAVSSLAKWLGQLHKQHLRAPKNPPVAICWINSYVGYGVFAR
FT                   ESIPAWSYIGEYTGILRRRQALWLDENDYCFRYPVPRYSFRYFTIDSGMQGNVTRFINH
FT                   SDNPNLEAIGAFENGIFHIIIRAIKDILPGEELCYHYGPLYWKHRKKREEFVPQEE"
FT   misc_feature    complement(129383..129769)
FT                   /note="HMMPfam hit to PF00856, SET domain, score 1.7e-35"
FT                   /inference="protein motif:HMMPfam:PF00856"
FT   CDS             complement(130003..130791)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0107"
FT                   /product="Zn-dependent hydrolase"
FT                   /db_xref="GOA:B0BAJ3"
FT                   /db_xref="InterPro:IPR001279"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ3"
FT                   /protein_id="CAP06505.1"
FT                   /translation="MEGFFPIASGSKGNCAYLGTRSCKLLIDLGISKQAVTEALHSMGI
FT                   HPEDIQGIFVTHEHSDHIAGLRSFIKTYRTPIICNIETARSLRQLLDLCPTFKIFTTGH
FT                   RFSLEDLRVQTFNVPHDAVDPVGFIFQYSGMKLGFCTDLGWVTSWITHLLCDCDYLLIE
FT                   SNHDPEMVLRSSRPESCKQRILSKQGHISNAECGALLQRVLTPRIKKIYLAHLSLECNT
FT                   AEQALNTVTSAIQEITDVHPVIAQSSGITDPIFFSAPSLV"
FT   misc_feature    complement(130147..130758)
FT                   /note="HMMPfam hit to PF00753, Metallo-beta-lactamase
FT                   superfamily, score 9.8e-15"
FT                   /inference="protein motif:HMMPfam:PF00753"
FT   CDS             complement(130795..133194)
FT                   /transl_table=11
FT                   /gene="ftsK"
FT                   /locus_tag="CTLon_0108"
FT                   /product="Cell division protein"
FT                   /db_xref="GOA:B0BAJ4"
FT                   /db_xref="InterPro:IPR018541"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ4"
FT                   /protein_id="CAP06506.1"
FT                   /translation="MGKERKKASVSLSPQTVFAVKTCVYLALACFSGLSLWSFQHNQPY
FT                   TQNWIGLLGWSLSSFLLYNFGVAAFLIPLNFGWLSFLNMKRTPAPLAFRKAAAFGAIPV
FT                   CCAVLLSMISPAQNLPQFLATRVPMVVMDLQPPKAYLGGIPFYLLYDGNSFSLKLLIGA
FT                   VGTGLIFLAILLCAIFYLIPKSFVLKKKALLDDLLKFLKNKFYACWNACKKLLKNLVNN
FT                   KSYVPEPSLRVPSSPSVAKKEMLKLPTPVISLPLENKDLHDDSSVNRTIFLTPPHPTKR
FT                   TLSPQKRTDLPNLLPKDSASAPAQTSYKPLPTPSPFVLAGDAPDLPQYHLLSKRNVRRP
FT                   ESLLEELKKKAAILQQTLASFGIEAAIGNICSGPTLAAFEVLPNTGVKVQKIKALENDI
FT                   ALNLQASSIRIIAPIPGKAAVGIEIPNPDPQPVNFRDLLEDYQKGTQRLQVPLLLGRKA
FT                   NGDNFWTDLATMPHLIIAGTTGSGKSVCINTIVMSLIMTSPPTDIKLVIVDPKKVELTG
FT                   YSQLPHMLTPVITESKEAHSALIWLVREMELRYEILRFLGLRNIQSFNSRTRNVDIEAS
FT                   YDKEIPEKMPFIVGIIDELSDLLLSSSHDIETPIVRLAQMARAVGIHLILATQRPSRDV
FT                   ITGLIKANFPSRIAFKVANKVNSQIIIDEPGAENLMGNGDMLVVSPGSFAPVRVQGAYI
FT                   CDDDINKVIKDLCSRFPCKYVIPSFNTYDDPGSMDPEDLDPLFNQAKTLVLQTGNASTT
FT                   FLQRKLKIGYARAASIIDQLEEARIVGPSEGAKPRQILVQLSNQDD"
FT   misc_feature    complement(131296..131898)
FT                   /note="HMMPfam hit to PF01580, FtsK/SpoIIIE family, score
FT                   1.5e-61"
FT                   /inference="protein motif:HMMPfam:PF01580"
FT   misc_feature    complement(131743..131766)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    complement(order(132652..132720,132745..132813,
FT                   132856..132924,132982..133050,133078..133146))
FT                   /note="5 probable transmembrane helices predicted for
FT                   CTL0108 by TMHMM2.0 at aa 17-39, 49-71, 91-113, 128-150 and
FT                   159-181"
FT                   /inference="protein motif:TMHMM:2.0"
FT   tRNA            complement(133374..133447)
FT                   /gene="tRNA-His"
FT                   /product="transfer RNA-His"
FT                   /anticodon=(pos:133411..133413,aa:His)
FT                   /note="tRNA His anticodon GTG, Cove score 82.43"
FT   rRNA            133979..135528
FT                   /gene="16s rRNA"
FT                   /product="16S ribosomal RNA"
FT   rRNA            135844..138711
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            138832..138948
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   CDS             complement(139465..140760)
FT                   /transl_table=11
FT                   /gene="dmpP"
FT                   /locus_tag="CTLon_0109"
FT                   /product="Na(+)-translocating NADH-quinone reductase
FT                   subunit F"
FT                   /db_xref="GOA:B0BAJ5"
FT                   /db_xref="InterPro:IPR017927"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ5"
FT                   /protein_id="CAP06507.1"
FT                   /translation="MTWLSGLYSIFVASAAFCSLDLILVAVILLSRKFLIKVHPCKLKI
FT                   NNDDSLTKTVDSGKTLLSSLLDSGIAIPSPCGGKAACKQCKVRITKNADEPLETDRSTF
FT                   SKQQLEQGWRLSCQTKVQHDLCLEVEDRYFNASSWEGTVVSNENVATFIKELVLSVDPS
FT                   RPIPFKPGGYLQITVPPYKTNTSDWKQTMDPQYYSDWETFHLFDQVIDNLSLDTDSANK
FT                   AYSLASYPAELPLIKFNVRIATPSFVDQAPDPTIPWGVCSSYIFSLKPGDKVMVSGPYG
FT                   ESFMKENNRPVIFLIGGAGSSFGRSHILDLLLNKHSDRELTLWYGARSLKENIYQEEYE
FT                   KLEKEFPNFHYHLVLSQPLQEDLDQGWDKNDPIKTNFLFKAFELGQLSHLPNPEDYLYY
FT                   VCGPALHNSSILTVLDNYGVERSSIVLDDFGS"
FT   misc_feature    complement(139540..139884)
FT                   /note="HMMPfam hit to PF00175, Oxidoreductase NAD-binding
FT                   domain, score 0.00069"
FT                   /inference="protein motif:HMMPfam:PF00175"
FT   misc_feature    complement(140392..140628)
FT                   /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster
FT                   binding doma, score 7.4e-12"
FT                   /inference="protein motif:HMMPfam:PF00111"
FT   misc_feature    complement(140674..140742)
FT                   /note="1 probable transmembrane helix predicted for CTL0109
FT                   by TMHMM2.0 at aa 7-29"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(140903..141247)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0110"
FT                   /product="preprotein translocase"
FT                   /db_xref="InterPro:IPR003849"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ6"
FT                   /protein_id="CAP06508.1"
FT                   /translation="MYSRLFFSILFFLGCCPALFADTDSPQRATFGQPAVMLGIAIVFF
FT                   YFILWRPEQKRRQAMEKRKSELAVGDKVTAMGIVGTIAEIREHTVILNIASGKIEILKT
FT                   AISEILKAEK"
FT   misc_feature    complement(140918..141160)
FT                   /note="HMMPfam hit to PF02699, Preprotein translocase
FT                   subunit, score 4e-40"
FT                   /inference="protein motif:HMMPfam:PF02699"
FT   misc_feature    complement(order(141098..141157,141185..141244))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CTL0110 by TMHMM2.0 at aa 2-21 and 31-50"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(141185..141247)
FT                   /locus_tag="CTLon_0110"
FT                   /note="Signal peptide predicted for CTL0110 by SignalP 2.0
FT                   HMM (Signal peptide probability 1.000) with cleavage site
FT                   probability 0.991 between residues 21 and 22"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    complement(141203..141235)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   CDS             complement(141352..142542)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0111"
FT                   /product="rRNA methyltransferase"
FT                   /db_xref="GOA:B0BAJ7"
FT                   /db_xref="InterPro:IPR010280"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ7"
FT                   /protein_id="CAP06509.1"
FT                   /translation="MLSCYRNCKHFGVCGGCSSPQMEYASSLKTKELALHNLFAPLIPS
FT                   QNILPVIPCSPLLRGRNKMEFSFYQTVDGEKTLGFISPSKPKKGIPITECLMIDERAMD
FT                   ILNITRSWWTAHPDLSAYYPPLNKGSLCTITVRVGNISNDFMIILTTSGREEFAVPLNI
FT                   IQEWQQSLLDSGLPITSIFWEEKLSARNSPTTFRTTHLYGAPFLKQQLSIDGRSSLFHI
FT                   RPRSFFQPQSLQAEKIIQTIKEFIDPCGEETLLDLYCGAGTIGILLAPYVKKIIGVELV
FT                   PDAVASAQENIQLNSVDMEVFLEDAKQFCKRNENLPSPDIVVIDPPRCGMQNKALKYLL
FT                   RMAPKKIVYVSCNPLTQIQECSVLVEQGYQLRHMQPIDQFPHTNHLENIVLLERLS"
FT   misc_feature    complement(141358..142476)
FT                   /note="HMMPfam hit to PF05958, tRNA
FT                   (Uracil-5-)-methyltransferase, score 2.8e-08"
FT                   /inference="protein motif:HMMPfam:PF05958"
FT   misc_feature    complement(141382..141414)
FT                   /note="PS01231 RNA methyltransferase trmA family signature
FT                   2."
FT                   /inference="protein motif:Prosite:PS01231"
FT   misc_feature    complement(141475..141570)
FT                   /note="PS01230 RNA methyltransferase trmA family signature
FT                   1."
FT                   /inference="protein motif:Prosite:PS01230"
FT   CDS             complement(142730..143107)
FT                   /transl_table=11
FT                   /gene="hctA"
FT                   /locus_tag="CTLon_0112"
FT                   /product="histone H1--like developmental protein"
FT                   /db_xref="GOA:B0BAJ8"
FT                   /db_xref="InterPro:IPR010886"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ8"
FT                   /protein_id="CAP06510.1"
FT                   /translation="MALKDTAKKMTDLLESIQQNLLKAEKGNKAAAQRVRTESIKLEKT
FT                   AKVYRKESIKAEKMGLMKKSKAAAKKAKAAAKKPVRATKTVAKKACTKRTCATKAKVKP
FT                   TKKAAPKTKVKTAKKTRSTKK"
FT   misc_feature    complement(142733..143104)
FT                   /note="HMMPfam hit to PF07432, Histone H1-like protein
FT                   Hc1,score 4.7e-78"
FT                   /inference="protein motif:HMMPfam:PF07432"
FT   CDS             143503..145971
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0113"
FT                   /product="putative exported protein"
FT                   /db_xref="GOA:B0BAJ9"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAJ9"
FT                   /protein_id="CAP06511.1"
FT                   /translation="MNIYRFISGSCSWFLIGWGICFGADVPLSFGHQCADVRKAMQEGK
FT                   PLLPIFDAFIRRIVNDSSSLSEKDWETATWLICEYIRGSLKRGEQELCSELVKPLFSLA
FT                   VMPPQSKARIKQVWQVLNPQGASLKDLVRLLESSGCSSSPQDHLLLSLYNMTLHSSYEN
FT                   KKAEILFAREQKNYQDALRLCEELQENLTSGLCSPLSTVYEVEQAFLKRISLAIRWEQE
FT                   KELQGSPSIELLLAYCSAEESYAEAVEQLIKKIELGSLDRSQEVDAILFAHALSKLPWE
FT                   ETLGEHELEVLISGGHYLTSIYSQHAYFSLLEQYFKKSQIQEISRLLDFGKTVFVETHK
FT                   KYPEYLFFLGKYWFYLRDFSRAEEAFSSVIRYADRLGVSLAETYEYLGCLACYKGHYAS
FT                   AKEFFLKAYKGWGREDAGIGLYLLAVLEKDPILCQQVREQVSLSFSHQEFLKWMDRNFL
FT                   PEPGKEGSSFFKVLGSSRSLSEEEFYGLLLKEMISRHHREKLSCSPIQRLVYDQLDREI
FT                   QLRLTETLIQTEDLLVRRKLSLWRALYEGSFVSWGSAHQNQTLFEKSILQCFSALSQQD
FT                   PSAIQQIAEAFSSGASLWQSSLRMVWAVSHTSENPISKAYSLGISDRPWGDRLYLLQYS
FT                   LEQYLSGDTELLEYLTQFPELFPNSPLLPLVYYLQARGEGDPIRKIAWLTKALETFTEN
FT                   SLLAKEMKAWAPLYYLMRMDLAETYLYLGNVSKSQTLFEAIQEEWDAPHHPYVKLIDPP
FT                   HIRVSLEMRWVSGLAHVYEAIQATEQRNALLISHIEKRFFQTRPRQEYIGKMLTFTSSL
FT                   CRELLADASW"
FT   sig_peptide     143503..143571
FT                   /locus_tag="CTLon_0113"
FT                   /note="Signal peptide predicted for CTL0113 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.861) with cleavage site
FT                   probability 0.840 between residues 23 and 24"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(145963..147237)
FT                   /transl_table=11
FT                   /gene="hemG"
FT                   /locus_tag="CTLon_0114"
FT                   /product="protoporphyrinogen oxidase"
FT                   /db_xref="GOA:B0BAK0"
FT                   /db_xref="InterPro:IPR004572"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK0"
FT                   /protein_id="CAP06512.1"
FT                   /translation="MKHALIVGSGIAGLSAAWWLHKRFPHVQLSILEKESRSGGLIVTE
FT                   KQQGFSLNMGPKGFVLAHDGQHTLHLIQSLGLADELLYSSPEAKNRFIHYNNKTRKVSP
FT                   WTIFKQNLPLSFAKDFFARPYKQDSSVEAFFKRHSSSKLRRNLLNPISIAIRAGHSHIL
FT                   SAQMAYPELTRREAQTGSLLRSYLKDFPKEKRTGPYLATLRSGMGMLTQALHDKLPATW
FT                   YFSAPVSKIRQLANGKISLSSPQGEITGDMLIYAGSVHDLPSCLEEIPETKLIKQTTSS
FT                   WDLSCVSLGWHASLPIPHGYGMLFADTPPLLGIVFNTEVFPQPERPNTIVSLLLEGRWH
FT                   QEEAYAFSLAAISEYLQIYTPPQAFSLFSPREGLPQHHVGFIQSRQRLLSKLPHNIKIV
FT                   GQNFAGPGLNRATASAYKAIASLLP"
FT   misc_feature    complement(145969..147207)
FT                   /note="HMMPfam hit to PF01593, Flavin containing amine
FT                   oxidoreductase, score 0.00038"
FT                   /inference="protein motif:HMMPfam:PF01593"
FT   misc_feature    complement(145972..147231)
FT                   /note="HMMPfam hit to PF01266, FAD dependent
FT                   oxidoreductase, score 0.0012"
FT                   /inference="protein motif:HMMPfam:PF01266"
FT   CDS             complement(147234..148607)
FT                   /transl_table=11
FT                   /gene="hemN"
FT                   /locus_tag="CTLon_0115"
FT                   /product="coproporphyrinogen oxidase (NAD)"
FT                   /db_xref="GOA:B0BAK1"
FT                   /db_xref="InterPro:IPR010723"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK1"
FT                   /protein_id="CAP06513.1"
FT                   /translation="MFNINFNFLKGLHQPAPRYTSYPTIVDWESSSDYGYTALERLAQE
FT                   QDPLSLYFHIPFCQSMCLYCGCTVVLNRKAEIVDHYIETLIQEMRLAFSLLGGKKPVSR
FT                   IHFGGGTPSRLSRAQFERLFTHIHRFFDLSNIEELAIEFDPRSLREDADKPLFLHNLGF
FT                   NRVSLGIQDTQWEVQEAVRRRQSYEESLLAYQLFRDLKFTGINIDLIYGLPKQTQSSFK
FT                   QTIEHILDMRPDRLALFSFAHVPWAKPHQKALRTKDLPSMEEKFAIYSQSRHTLIQEGY
FT                   QAIGLDHFSLPDDPLTIALKNKTLIRNFQGYSLPPEEDLLGFGISATSFIRGIYLQNVK
FT                   DLREYSETIQASKLATVKGKILSQDDKIRKWVIHTLMCSFSLSKLEFEQRFHERFDRYF
FT                   ADSYDRLCGMESAGLIRQDSSSLQVTPLGELFVRVIATAFDHYFLKNIVEKPLFSKSI"
FT   misc_feature    complement(147318..147680)
FT                   /note="HMMPfam hit to PF06969, HemN C-terminal region,score
FT                   1.9e-46"
FT                   /inference="protein motif:HMMPfam:PF06969"
FT   misc_feature    complement(147924..148454)
FT                   /note="HMMPfam hit to PF04055, Radical SAM
FT                   superfamily,score 2e-21"
FT                   /inference="protein motif:HMMPfam:PF04055"
FT   CDS             complement(148580..149590)
FT                   /transl_table=11
FT                   /gene="hemE"
FT                   /locus_tag="CTLon_0116"
FT                   /product="uroporphyrinogen decarboxylase"
FT                   /db_xref="GOA:B0BAK2"
FT                   /db_xref="InterPro:IPR000257"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAK2"
FT                   /protein_id="CAP06514.1"
FT                   /translation="MPMTGFYETISPRDQQRPPIWFLRQVGRYIPQYQELKRNRSLKDF
FT                   FLDTESIVEATLLGPSLLGVDAAIVFADILSILEGFSVDYRFAPGPEVSYSPHEPLIFT
FT                   KDPQETFSFLLEAIQQLTKRLTVPLIAFAASPFTLASYLIEGGASRDYPKTIAFLYQYP
FT                   DRFKALLDEITLGTATYLQMQVQAGAAAIQLFESSSLRLPPHLFAKYVVAPNTKLIRQI
FT                   KQTGNPPISLFCRCFYQEFLSLYAIGADTLHPDYHVELPEVYRQIHSPGSIQGNFDPAL
FT                   LLLPQDALIAHLEAYLAPLKQQSHYIFNLGHGILPQTPIENVQAVVSCLTSISTS"
FT   misc_feature    complement(148592..149590)
FT                   /note="HMMPfam hit to PF01208, Uroporphyrinogen
FT                   decarboxylase (URO-D), score 1.6e-46"
FT                   /inference="protein motif:HMMPfam:PF01208"
FT   CDS             complement(149603..152842)
FT                   /transl_table=11
FT                   /gene="mfd"
FT                   /locus_tag="CTLon_0117"
FT                   /product="transcription-repair coupling factor"
FT                   /db_xref="GOA:B0BAK3"
FT                   /db_xref="InterPro:IPR014021"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK3"
FT                   /protein_id="CAP06515.1"
FT                   /translation="MDFDPTSIDFSSFPLLKDTKLPSLVENLHSGARSFVIAKLFKELK
FT                   RSIVVITTPAKLDDLFEDLTTLLAESPLEFPASEIDLSPKLVNVDAVGKRDHILYSLQK
FT                   QSAPVICVTTLKALLERTPSPESMIRDHLELRVGEELDPDTLLDLCKSLGYRHEALARE
FT                   KGDFAFRGGIVDIFPLSSPEPFRIEFWGDRVSSIRSYNPSDQLSTGKLSQITISPVTAI
FT                   IPTDKLSYSLLDYFKAFPLCIFDGLSSLEDNFSDIAGILASLPKRFMPIQDLCQRILKE
FT                   FTPLFFEEKTFPNLISHKDTGFSIEAFHKKISVQRVSLPFIYPPALIETSGEQNPLLAF
FT                   LKTFQDFCAGRTLSLALYCSNTKSLKEAHDLAAACIPNTQIYDHPTTLSSSFALVEAGF
FT                   AAVSLSEFAASKVLRRQKQRNYFSTTTEEVYIPVPGETVVHLHNGIGKFIGIEKKPNHL
FT                   NIETDYLVLEYADKARLYVPSDQAYLISRYVGASEKAPDLHHLNGAKWRRSRELSENSV
FT                   ILYAEKLIQMEAQRSTANSFIYPPHGEEVIKFAESFPYEETPDQLKAIDQIYADMMSDK
FT                   LMDRLICGDAGFGKTEIIMRAAVKAVCDGHKQVIVMVPTTILANQHFETFSQRMAGLPI
FT                   TIGLLSRFSQGKTMKKTLEDIAQGRIDILIGTHKVINKAIEFHNPGLLIVDEEQRFGVK
FT                   AKDSLKERFPTIDCLTVSATPIPRTLYLSLSGARDLSLITMPPLDRLPVSTFVMEHSEE
FT                   TLSAAIRHELLRGGQVYVIHNRIESIFRLGETIRTLIPEARIGVAHGQMHADELASIFY
FT                   KFKTQQTNVLVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYF
FT                   LVPHLDRLSGPTSKRLEALNKQEYGGGMKIALHDLEIRGAGNILGTDQSGHISAVGFNL
FT                   YCKLLKKAVAALKHKQKPMLFHDDIKIEFPYHARIPEDYIDLASMRIEFYQKIGNAESE
FT                   EELEAIEEELRDRFGPSPEAISWLFALARIRLIAQEYHLSSIKGTGNALYIQQYHDKDK
FT                   QIQKTLPYSLSPTPELLVKEVQESVEKAFPK"
FT   misc_feature    complement(149645..149971)
FT                   /note="HMMPfam hit to PF03461, TRCF domain, score 4.3e-43"
FT                   /inference="protein motif:HMMPfam:PF03461"
FT   misc_feature    complement(150251..150484)
FT                   /note="HMMPfam hit to PF00271, Helicase conserved
FT                   C-terminal domain, score 4.7e-17"
FT                   /inference="protein motif:HMMPfam:PF00271"
FT   misc_feature    complement(150674..151171)
FT                   /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score
FT                   1e-32"
FT                   /inference="protein motif:HMMPfam:PF00270"
FT   misc_feature    complement(151070..151093)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    complement(151256..151543)
FT                   /note="HMMPfam hit to PF02559, CarD-like/TRCF domain,score
FT                   3e-35"
FT                   /inference="protein motif:HMMPfam:PF02559"
FT   CDS             complement(152818..155445)
FT                   /transl_table=11
FT                   /gene="alaS"
FT                   /locus_tag="CTLon_0118"
FT                   /product="alanyl-tRNA synthetase"
FT                   /db_xref="GOA:B0BAK4"
FT                   /db_xref="InterPro:IPR012947"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAK4"
FT                   /protein_id="CAP06516.1"
FT                   /translation="MLSNTLRSNFLKFYANRNHTPVASSPVFPHNDPSILFTNAGMNQF
FT                   KNIFLGKEQTSYTRATTSQKCIRAGGKHNDLENVGHTSRHLTFFEMLGNFSFGDYFKQD
FT                   AISFAWEVSLSVFNFDPDFIYATVHEKDDEAFALWEKYLPTDRIFRLTDKDNFWSMADT
FT                   GPCGFCSELLFDRGEKFGKAASPLEDVDGERFLEYWNLVFMEFNRTSDGTLLALQKKCV
FT                   DTGAGLERLVSLLAETKTVFEADVLRHLISKIENLSGTTYSPTEAKGAAFRVIADHIRS
FT                   LSFAIADGLLPGNTERGYVLRKILRRAVNYGKRLGFNRPFLADVVPSLVDVMGEAYPEL
FT                   SASVTQIQEVLTTEEEHFFKTLQRGGNLLQQVLKSSASSAKISGEDAFKLKDTYGLPID
FT                   EIALLAKDYNYAIDMDTFEKLEVEAKERSRKNTKKTKNDSDSVFQDLDPTNTSEFIGYD
FT                   TLSCDTFIEGIIKYNEIASSLEEGDEGAIILRTTPFYAEKGGQIGDSGEIFCESGTFLV
FT                   SHTIAPKAGLIVHLGKLSQGSLTTTMAVTAQVNQNLRKKTANNHTGCHLLHKALEMTLG
FT                   EHIRQAGSYVDSQKIRLDFTHNKALSPEDLLAIETLVNEKIRENDPVTIREVLYSDVMS
FT                   SSEIKQFCGDKYGDIVRVVLAGFSHELCGGTHAQATGDIGYFRITKEHAVATGIRRIEA
FT                   TTGEDAENIARGQDVDLNEIATVIQSPKDQILVKIRSVMEEKKDLAKQVADLENQLVQQ
FT                   QVKTLLTSCEKICDTSYLVYYLTEEEGQRIQHYANAIHKEIPTNFISLWITEKNGRYIV
FT                   LSRVSDDLTKRGVQAHTLLAELLAPYGGRCGGKAISAQGSSAELPQIEFLNKTLRQWIS
FT                   TQLA"
FT   misc_feature    complement(152842..153057)
FT                   /note="HMMPfam hit to PF02272, DHHA1 domain, score 1.4e-12"
FT                   /inference="protein motif:HMMPfam:PF02272"
FT   misc_feature    complement(153367..153495)
FT                   /note="HMMPfam hit to PF07973, Threonyl and Alanyl tRNA
FT                   synthetase seco, score 6.5e-17"
FT                   /inference="protein motif:HMMPfam:PF07973"
FT   misc_feature    complement(153787..155433)
FT                   /note="HMMPfam hit to PF01411, tRNA synthetases class II
FT                   (A), score 0"
FT                   /inference="protein motif:HMMPfam:PF01411"
FT   misc_feature    complement(154744..154773)
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT                   /inference="protein motif:Prosite:PS00339"
FT   rRNA            156023..157572
FT                   /gene="16s rRNA"
FT                   /product="16S ribosomal RNA"
FT   rRNA            157888..160755
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            160876..160992
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   CDS             161270..163270
FT                   /transl_table=11
FT                   /gene="tktB"
FT                   /locus_tag="CTLon_0119"
FT                   /product="transketolase"
FT                   /db_xref="GOA:B0BAK5"
FT                   /db_xref="InterPro:IPR015941"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK5"
FT                   /protein_id="CAP06517.1"
FT                   /translation="MAGNSDLDIDILEKIAGTIKQLSIESIQKASSGHPGMPLGCAELA
FT                   AYLYGYVLRYNSKDSRWVNRDRFVLSAGHGSALLYSCLHLAGFDVNLEDLQQFRQLQSR
FT                   TPGHPEFRETDGVEATTGPLGQGVGNAVGMALSLKMLGARFNQPANSIFDAKVYCLAGD
FT                   GCFMEGVSHEACSFAGSLGLDNLVLIYDYNEIILDGTLHDVSIEDTKQRFLAYGWDVFE
FT                   TDGHDFESLHQVFTQIKKSQCKPTLIIAHTIIGHGSPKEGTNKAHGSPLGEDGVAQTKS
FT                   FWHLPEEKFFVPSAVKMFFAAKQQEGKKLQEEWQERFRVWSKQAPEQHQEYLRLIQEIS
FT                   IQELEEILNLIDMPESIAGRAASNKVIQVLAEDIPSLVGGSADLSSSDGTWIAKEGTIS
FT                   ASDFLGRNIRYGVREFGMGTIMNGLAYSQVFRPFGGTFLVFSDYLRSAIRLAALSKLPV
FT                   IYQFTHDSIFVGEDGPTHQPIEQIMSLRAIPGLRVIRPADANEVKGAWLAALESAGPTA
FT                   LILSRQNLPTLKETKRSFREGVRKGAYILVKEEGDRPDYTLCASGSEVHLAIEVAQSLM
FT                   ALDKRVRVISFPCWELFERQDVEYRESVIGGDLGLRVSIEAGTALGWYKYIGSNGLAIA
FT                   MDGFGMSGAPNEVAETCGFTVDNIVQRILSV"
FT   misc_feature    161300..162289
FT                   /note="HMMPfam hit to PF00456, Transketolase, thiamine
FT                   diphosphate b, score 1.3e-154"
FT                   /inference="protein motif:HMMPfam:PF00456"
FT   misc_feature    162338..162850
FT                   /note="HMMPfam hit to PF02779, Transketolase, pyridine
FT                   binding domai, score 1.9e-64"
FT                   /inference="protein motif:HMMPfam:PF02779"
FT   misc_feature    162761..162796
FT                   /note="PS00213 Lipocalin signature."
FT                   /inference="protein motif:Prosite:PS00213"
FT   misc_feature    162896..163246
FT                   /note="HMMPfam hit to PF02780, Transketolase, C-terminal
FT                   domain, score 0.0009"
FT                   /inference="protein motif:HMMPfam:PF02780"
FT   CDS             complement(163267..164136)
FT                   /transl_table=11
FT                   /gene="amn"
FT                   /locus_tag="CTLon_0120"
FT                   /product="AMP nucleosidase"
FT                   /db_xref="GOA:B0BAK6"
FT                   /db_xref="InterPro:IPR010944"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK6"
FT                   /protein_id="CAP06518.1"
FT                   /translation="MTHQHKKISEETIACDMLERYTGSTIQEFQPYLLLTNFGYYVDVF
FT                   AEIYQVPVSRGSMFSAAHAPQIHTSIIDFKLGSPGAALTVDLCSFLPNATAAIMLGMCG
FT                   GLRSHYQIGDYFVPVASIRKDGTSDAYFPPEVPALANFVVQKMITNILEAKNLPYHIGI
FT                   THTTNIRFWEFNKEFRRKLYENKAQTVEMECATLFAAGYRRNLPLGALLLISDLPLRKD
FT                   GIKTKESSSAVLNSHTKEHILTGVEVFASLQKKSGPGIKKTKGLPHMEFGQADDSLSEQ
FT                   TGVSDGDF"
FT   misc_feature    complement(163390..164028)
FT                   /note="HMMPfam hit to PF01048, Phosphorylase family, score
FT                   7.4e-08"
FT                   /inference="protein motif:HMMPfam:PF01048"
FT   CDS             164392..164928
FT                   /transl_table=11
FT                   /gene="efp"
FT                   /locus_tag="CTLon_0121"
FT                   /product="translation elongation factor P"
FT                   /db_xref="GOA:B0BAK7"
FT                   /db_xref="InterPro:IPR013185"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK7"
FT                   /protein_id="CAP06519.1"
FT                   /translation="MRVEIDGQPYVILQNDFVKPGKGQAFNRIKVKNFLTGRVIEKTFK
FT                   SGESIETADVREQQMRLLYTDQEGATFMDDETFEQELIFWDKLENVRQWLLEDTIYTLV
FT                   LYNGDVISVEPPIFMELTIAETAPGVRGDTASGRVLKPATTNTGAKIMVPIFIEEGEVV
FT                   KVDTRTGSYESRVSK"
FT   misc_feature    164392..164541
FT                   /note="HMMPfam hit to PF08207, Elongation factor P (EF-P)
FT                   KOW-like domain, score 1.2e-18"
FT                   /inference="protein motif:HMMPfam:PF08207"
FT   misc_feature    164560..164724
FT                   /note="HMMPfam hit to PF01132, Elongation factor P (EF-P)
FT                   OB domain, score 3.8e-05"
FT                   /inference="protein motif:HMMPfam:PF01132"
FT   misc_feature    164812..164871
FT                   /note="PS01275 Elongation factor P signature."
FT                   /inference="protein motif:Prosite:PS01275"
FT   CDS             complement(164944..165168)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0122"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK8"
FT                   /protein_id="CAP06520.1"
FT                   /translation="MKEKKVLELSPEATLLKKLRDRAISQQETQKRKAWVEKLAAMPES
FT                   TRDYLEPQAHLEPSQLFRKVAERLLEEGA"
FT   CDS             complement(165215..166087)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0123"
FT                   /product="conserved hypothetical protein"
FT                   /note="Note the PF00149;Calcineurin-like phosphoesterase
FT                   motif"
FT                   /db_xref="GOA:B0BAK9"
FT                   /db_xref="InterPro:IPR004843"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAK9"
FT                   /protein_id="CAP06521.1"
FT                   /translation="MPNKPSHAFRLIHCSDIHFCVLPKNPFQCFNKRFKGLLRQLIGGV
FT                   SFQAFAISQRFPQLVKQLEADSVCVTGDMTITALDTEFRFAKEFLSRVESVAPVYIVPG
FT                   NHDVYTHRALKKQTFYSYFPNKELQTHRIAFKKLTPTWWLVLLDCSCFNGWYTANGEVT
FT                   DSQLLALEQFLSSLPASEHVIVANHYPLSPTTRPAHDLLNYAPLKSLLMNSPSVRLYLH
FT                   GHDHYVELDHLPPLVVNSGSLTLPSNARFHIIDLHPEGGYQIATAALTNLKETSTPLTI
FT                   SIEETTISL"
FT   misc_feature    complement(165404..166063)
FT                   /note="HMMPfam hit to PF00149, Calcineurin-like
FT                   phosphoesterase, score 7.8e-17"
FT                   /inference="protein motif:HMMPfam:PF00149"
FT   CDS             complement(166168..167706)
FT                   /transl_table=11
FT                   /gene="groEL"
FT                   /locus_tag="CTLon_0124"
FT                   /product="60 kDa chaperonin GroEL"
FT                   /db_xref="GOA:B0BAL0"
FT                   /db_xref="InterPro:IPR002423"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAL0"
FT                   /protein_id="CAP06522.1"
FT                   /translation="MPHDNNEMHRNTIHQLFTGLDKAYQIVKGFYGPAYSSSSKDFFKG
FT                   RGYHILSRIELSDPFERIGVYFARSLAKRIHKRHADGVISSVILLRAFLKASIPFIDQG
FT                   LSPRLLASALASQKEAVCAYLHSHSFLLKDASKVLGLIRSHLPDPLIGEAFAEAVAYTG
FT                   HEGAVALSQRSGSTLHLVKGIQTQKGYRMPSFFPHDSFHENPIVAPKIFVTDQKIHCLF
FT                   PFLPLLKKFSEEQTPLIIFCKEIAPDPLATCIANRIAGLLDVLVVTIPDTTLLEDIALL
FT                   TGTTVFSSPPFSNKPPIELPLLGSCTWAELSRDHTLLVCENLVPEVVKLKVRQLDHAIH
FT                   NSEDETSRKLLKKRKHRLENSIAIIPVKQDTAPLHELALKTLNSTQESGFVLGGGAALL
FT                   YATQSLSSSSEHSQEEQAAVQILQTACRTLLEQLVNSVYMDGKLVADKLCSLGTPSLGF
FT                   NVVSQQIEDMISAGIIAPLNAVLDIFSCSLHTAVDLLLASFTTPPTPAAKEKKT"
FT   misc_feature    complement(166198..167658)
FT                   /note="HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin
FT                   family, score 1.5e-21"
FT                   /inference="protein motif:HMMPfam:PF00118"
FT   tRNA            complement(167784..167854)
FT                   /gene="tRNA-Cys"
FT                   /product="transfer RNA-Cys"
FT                   /anticodon=(pos:167820..167822,aa:Cys)
FT                   /note="tRNA Cys anticodon GCA, Cove score 61.23"
FT   CDS             168154..169506
FT                   /transl_table=11
FT                   /gene="murF"
FT                   /locus_tag="CTLon_0125"
FT                   /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
FT                   ligase"
FT                   /db_xref="GOA:B0BAL1"
FT                   /db_xref="InterPro:IPR013221"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAL1"
FT                   /protein_id="CAP06523.1"
FT                   /translation="MRPILLEEWSSLLLGMEIPRSGKKVTGVAIDSRLVLPGDVFFALP
FT                   GNRTSGHLFLKQAAQSGAVAAVVASDYHGPSYGLQLLRVADPREALRAAGRTQGALFHG
FT                   EVIGITGSVGKTTTKNFANQLLSSVYKVFMSPKSYNSQLTLPLSVLMADGDEDFLLLEM
FT                   GVSEPNNMKNLLEIIEPTIGVITHIDVQHAMHFLDKGAQGIVEEKSLLLERCGLQLIPK
FT                   DSSWFQFFAKKNSAAERFSFSMSNETADFYYRAIHSEGVLISAPDGDIELPAVFPYSPA
FT                   YMNFIIAVALAWITNVPMDRLEQVSQSLFLPAMRFEQQEHNGIRVINDAYNASPDAMLA
FT                   ALDAVPVPPEGGKIIFILGHMAELGRYSDECHIAVARKAVTKAHIIFFVGEKWFPVRDI
FT                   VRDADCQIGFYSAVSEIMDTVKALVQQGDVVLLKGSRSLELETLLPCFSIS"
FT   misc_feature    168223..168450
FT                   /note="HMMPfam hit to PF01225, Mur ligase family,catalytic
FT                   domain, score 5.5e-16"
FT                   /inference="protein motif:HMMPfam:PF01225"
FT   misc_feature    168472..169029
FT                   /note="HMMPfam hit to PF08245, Mur ligase middle
FT                   domain,score 8.6e-17"
FT                   /inference="protein motif:HMMPfam:PF08245"
FT   misc_feature    169087..169350
FT                   /note="HMMPfam hit to PF02875, Mur ligase family,glutamate
FT                   ligase doma, score 6.9e-09"
FT                   /inference="protein motif:HMMPfam:PF02875"
FT   CDS             169652..170662
FT                   /transl_table=11
FT                   /gene="mraY"
FT                   /locus_tag="CTLon_0126"
FT                   /product="phospho-N-acetylmuramoyl-pentapeptide-transfera
FT                   se"
FT                   /db_xref="GOA:B0BAL2"
FT                   /db_xref="InterPro:IPR018480"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAL2"
FT                   /protein_id="CAP06524.1"
FT                   /translation="MLPLTYVVKAFSIGLFFSLFLMKPLISWLKKQGFQDHIHKDHCEK
FT                   LEELHKDKAYIPTAGGIVFVFASVLAVLLLFPIQLWSTWFCIGTILLWGALGWCDDQIK
FT                   NRRRVGHGLSAKHKFLIQNCLAAGVVLPIMFAYKESFLSFHLPFLGIVSLPHHWWSYLL
FT                   SFAIATLAIVGTSNSVNLTDGLDGLAAGAMVIACLGMLVVACTNGAPWAFICCVLLATL
FT                   AGSCLGFLRYNKSPARVFMGDTGSLFLGAMLGMCAVLLRAEFLLLFMGGIFVLESLSVI
FT                   VQVGSYKLRKKRVFLCAPLHHHYEYKGLSEKAVVRNFLIVELICVVVGIIAVFVD"
FT   misc_feature    order(169679..169738,169811..169879,169889..169948,
FT                   170006..170062,170120..170188,170201..170269,
FT                   170279..170347,170366..170434,170444..170512,
FT                   170588..170656)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CTL0126 by TMHMM2.0 at aa 10-29, 54-76,
FT                   80-99,119-137,157-179, 184-206, 210-232, 239-261, 265-287
FT                   and 313-335"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    169898..170449
FT                   /note="HMMPfam hit to PF00953, Glycosyl transferase
FT                   family,score 3.2e-40"
FT                   /inference="protein motif:HMMPfam:PF00953"
FT   CDS             170674..171924
FT                   /transl_table=11
FT                   /gene="murD"
FT                   /locus_tag="CTLon_0127"
FT                   /product="UDP-N-acetylmuramoylalanine--D-glutamate ligase"
FT                   /db_xref="GOA:B0BAL3"
FT                   /db_xref="InterPro:IPR005762"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAL3"
FT                   /protein_id="CAP06525.1"
FT                   /translation="MGLERVVVIGLGVSGRSIARFLAQKGVCVLGVDKSLHALQNCPYI
FT                   QEKYLENEEFPSQVDYVVRSPGVSKEHPWVQAAIASHIPVMTDIQLAFQTEKFTERESL
FT                   AITGTTGKTTTILFLEYLFKRSGIPAFAMGNVGIPILDGMQNPGVRIVEISSFQLADQE
FT                   KSYPVLSGGMILNISDNHLDYHGNFSEYFQAKQNLALCMRNPDDLWVGDERFYGHLYLE
FT                   EVQKYMRLLDKESALKPLYLHDKHNYCCAYLLAKIEFPISETSFIEAVATFNKPPHRME
FT                   YLGQKQGIHYINDSKATTVSATETALLGVGNQAIVILGGRNKGCTFSSLLPALRKAAKS
FT                   VVAMGECAQEIARDLEEFPVTVVKNLSEALLCAEEQAVPGDVIVLSPACASFDQFRSYE
FT                   ERGAMFKHLVGMEEVLL"
FT   misc_feature    170983..171438
FT                   /note="HMMPfam hit to PF08245, Mur ligase middle
FT                   domain,score 3e-23"
FT                   /inference="protein motif:HMMPfam:PF08245"
FT   misc_feature    171499..171726
FT                   /note="HMMPfam hit to PF02875, Mur ligase family,glutamate
FT                   ligase doma, score 1.2e-12"
FT                   /inference="protein motif:HMMPfam:PF02875"
FT   CDS             171921..172658
FT                   /transl_table=11
FT                   /gene="nlpD"
FT                   /locus_tag="CTLon_0128"
FT                   /product="muramidase"
FT                   /db_xref="GOA:B0BAL4"
FT                   /db_xref="InterPro:IPR018392"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAL4"
FT                   /protein_id="CAP06526.1"
FT                   /translation="MNRRNTMIVATTVNAVLLAVLFMTARHSEQEIEYPQKIAPIKILE
FT                   PVPVVDKAPEKLEKKPEVIAKPSQVVRNPVVSKAELAAQFADKNPKTEKESSGGSKKIS
FT                   FTPVESTTPVAPEISVVNAKVVEKTPEKEEFSTVIVKKGDFLERIARSNHTTVSALMQL
FT                   NDLSSTQLQIGQVLRVPKTNKTEKDLQVKTPNPEDYYVVKEGDSPWAIALSNGIRLDEL
FT                   LKLNGLDEQKARRLRPGDRLRIR"
FT   sig_peptide     171921..172004
FT                   /gene="nlpD"
FT                   /locus_tag="CTLon_0128"
FT                   /note="Signal peptide predicted for CTL0128 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.994) with cleavage site
FT                   probability 0.985 between residues 28 and 29"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    171939..171995
FT                   /note="1 probable transmembrane helix predicted for CTL0128
FT                   by TMHMM2.0 at aa 7-25"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    172332..172460
FT                   /note="HMMPfam hit to PF01476, LysM domain, score 1e-16"
FT                   /inference="protein motif:HMMPfam:PF01476"
FT   misc_feature    172518..172655
FT                   /note="HMMPfam hit to PF01476, LysM domain, score 3.2e-13"
FT                   /inference="protein motif:HMMPfam:PF01476"
FT   CDS             172674..173831
FT                   /transl_table=11
FT                   /gene="ftsW"
FT                   /locus_tag="CTLon_0129"
FT                   /product="Cell division protein"
FT                   /db_xref="GOA:B0BAL5"
FT                   /db_xref="InterPro:IPR013437"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAL5"
FT                   /protein_id="CAP06527.1"
FT                   /translation="MKWFLISCLLGIFSLGLIMVFDTSSAEVLDRALSCSTHKALIRQI
FT                   TYLGLGLGIASFVYILGWKDFLKMSPMLLIFVGITLVLVLIPGIGVCRNGAKRWLGVGQ
FT                   LTLQPSEFVKYLVPCVAIECLTTKPSIRSSFKRFVAFVALLFIPIMLIAIEPDNGSAAV
FT                   ISFSLIPVFIVTAVRLRYWLVPLLCVLCIGGTFAYRLPYVRNRLQVYLHPELDIKGRGH
FT                   QPYQAKIAAGSGGVFGKGPGKGLQKLTYLPEAQNDYIAAIYAEEFGFIGMLLLILLYMG
FT                   FIYSGYVIAMRASLLSGAALAISITVIIGMQAFINLGVVSGLLPSKGVNLPFFSQGGSS
FT                   LIANMCGMGLLLRICDEENQQNRIGSGGNRRAHYPCSSSKRDFYS"
FT   sig_peptide     172674..172748
FT                   /gene="ftsW"
FT                   /locus_tag="CTLon_0129"
FT                   /note="Signal peptide predicted for CTL0129 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.992) with cleavage site
FT                   probability 0.558 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    172677..173753
FT                   /note="HMMPfam hit to PF01098, Cell cycle protein, score
FT                   8e-79"
FT                   /inference="protein motif:HMMPfam:PF01098"
FT   misc_feature    order(172683..172736,172794..172862,172890..172949,
FT                   173082..173135,173148..173201,173214..173282,
FT                   173472..173540,173559..173627,173670..173738)
FT                   /note="9 probable transmembrane helices predicted for
FT                   CTL0129 by TMHMM2.0 at aa 4-21, 41-63,
FT                   73-92,137-154,159-176, 181-203, 267-289, 296-318 and
FT                   333-355"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             173740..174798
FT                   /transl_table=11
FT                   /gene="murG"
FT                   /locus_tag="CTLon_0130"
FT                   /product="UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
FT                   pyrophosphoryl-undecaprenol N-acetylglucosamine
FT                   transferase"
FT                   /db_xref="GOA:B0BAL6"
FT                   /db_xref="InterPro:IPR007235"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAL6"
FT                   /protein_id="CAP06528.1"
FT                   /translation="MKKINKIVLAVGGTGGHIIPALAARETFIHEDIEVLLLGKGLAHF
FT                   LGDDSEIAYCDIPSGSPFSLRVNRMFSGAKQLYKGYVAALQKIRDFTPDLAIGFGSYHS
FT                   LPAMLASIRSRIPLFLHEQNIVPGKVNKLFSRFAKGVGMSFAAAGEHFHCRAEEVFLPI
FT                   RKLSEQIVFPGASPVICVVGGSQGAKILNDVVPKALARIRESYSNLYVHHIVGPKGDLQ
FT                   AVSQVYQDAGINHTVTAFDHNMLGVLQASDLVISRSGATMLNELLWVQVPAILIPYPGA
FT                   YGHQEVNAKFFTHTVGGGTMILQKYLTEESLSKQVLLALDPATSENRRKAMLSAQQKKS
FT                   FKSLYQFICESL"
FT   sig_peptide     173740..173808
FT                   /gene="murG"
FT                   /locus_tag="CTLon_0130"
FT                   /note="Signal peptide predicted for CTL0130 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.995) with cleavage site
FT                   probability 0.978 between residues 23 and 24"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    173758..173826
FT                   /note="1 probable transmembrane helix predicted for CTL0130
FT                   by TMHMM2.0 at aa 7-29"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    173758..174168
FT                   /note="HMMPfam hit to PF03033, Glycosyltransferase
FT                   family,score 2.3e-42"
FT                   /inference="protein motif:HMMPfam:PF03033"
FT   misc_feature    174271..174774
FT                   /note="HMMPfam hit to PF04101, Glycosyltransferase
FT                   family,score 4.3e-54"
FT                   /inference="protein motif:HMMPfam:PF04101"
FT   CDS             174803..177214
FT                   /transl_table=11
FT                   /gene="murC"
FT                   /locus_tag="CTLon_0131"
FT                   /product="UDP-N-acetylmuramate--alanine ligase"
FT                   /db_xref="GOA:B0BAL7"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAL7"
FT                   /protein_id="CAP06529.1"
FT                   /translation="MMKSLFYHFIGIGGIGMSALAHVLLDRGYSVSGSDLSEGKVVEKL
FT                   KNKGAEFFLGNQEEHIPEGAVVVYSSSISKENPEFLSAKSRGNRVVHRAELLAELAQDQ
FT                   ISIFVTGSHGKTTVSSLITAILQEAKKNPSFAIGGLNQEGINGGSGSEYFVAEADESDG
FT                   SIRCYTPEFSVITNIDDEHLSNFEGDRELLLASLKDFALKTQQICWYNGDCPRLRSCLQ
FT                   GHTFGLDSSCDLHILSYYQEGWRLYFTAKYQDVVYADIEVQLVGMHNVLNAAAAMGIAL
FT                   SLGIDEGAIRNAFRGFSGVQRRLQRKNSSETFLFLEDYAHHPSEISCTLRAVRTAVGQR
FT                   RILAICQPHRFSRLRECIDSFPSAFKDADEVLLTEVYSAGEEAEDISYQELAEAISQES
FT                   IVKCTHIPFHELQRHLEQSIRVHDVCVSLGAGNIVNLGEKLRDFEPQKLHLGIICGGKS
FT                   CEHEISVLSAKNIAKHLSKSFYDVSYFLITREGLWESVSSLETAEDSGKSVFDPEIAQR
FT                   LEKVDVVLPILHGPYGEDGAMQGFLETIGKPYTGPAIAFSAIAMNKVFTKRFMSDLGIP
FT                   VVPYLPLTLAGWKQEQDKWLAHIVEAFSFPMFVKSSHLGSSIGVFEVHNVIELRDAINE
FT                   AFMRDNDVFVEENRLGCKEIEVSVLGDGSGAFVIAGLHERRGSGGFIDYQEKYGLSGKS
FT                   SAQIVFDTDLSKEIQEQILEAADKIYRLLLGKGSCRIDFFVDEEGNFWLSEMNPIPGMT
FT                   ETSPFLTSFIRKGWSYEQIVHQLVIDGLQRFNQRQRLISTSFVDQAFAIQ"
FT   sig_peptide     174803..174865
FT                   /gene="murC"
FT                   /locus_tag="CTLon_0131"
FT                   /note="Signal peptide predicted for CTL0131 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.660) with cleavage site
FT                   probability 0.596 between residues 21 and 22"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    174815..174874
FT                   /note="1 probable transmembrane helix predicted for CTL0131
FT                   by TMHMM2.0 at aa 5-24"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    174818..175117
FT                   /note="HMMPfam hit to PF01225, Mur ligase family,catalytic
FT                   domain, score 7.5e-34"
FT                   /inference="protein motif:HMMPfam:PF01225"
FT   misc_feature    175121..175642
FT                   /note="HMMPfam hit to PF08245, Mur ligase middle
FT                   domain,score 5.8e-15"
FT                   /inference="protein motif:HMMPfam:PF08245"
FT   misc_feature    175700..175963
FT                   /note="HMMPfam hit to PF02875, Mur ligase family,glutamate
FT                   ligase d, score 3.6e-26"
FT                   /inference="protein motif:HMMPfam:PF02875"
FT   misc_feature    176144..176485
FT                   /note="HMMPfam hit to PF01820, D-ala D-ala ligase
FT                   N-terminus, score 1.3e-61"
FT                   /inference="protein motif:HMMPfam:PF01820"
FT   misc_feature    176153..176176
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    176387..176422
FT                   /note="PS00843 D-alanine--D-alanine ligase signature 1."
FT                   /inference="protein motif:Prosite:PS00843"
FT   misc_feature    176486..177058
FT                   /note="HMMPfam hit to PF02222, ATP-grasp domain, score
FT                   0.0014"
FT                   /inference="protein motif:HMMPfam:PF02222"
FT   misc_feature    176486..177136
FT                   /note="HMMPfam hit to PF07478, D-ala D-ala ligase
FT                   C-terminus, score 1.3e-113"
FT                   /inference="protein motif:HMMPfam:PF07478"
FT   CDS             complement(177251..177670)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0132"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:B0BAL8"
FT                   /db_xref="InterPro:IPR004087"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAL8"
FT                   /protein_id="CAP06530.1"
FT                   /translation="MEDFAAYIVKNLVTDPNAVEIRSSEDKASATLKLEIHAASEDIGK
FT                   IIGRKGQTIQALRTILKRVGARLQKKILVELAQPENGSLTDEEVLSLDYISAASAEDFE
FT                   EDSSFAENSIEEEPSVIVRSLAGVCPGCSCSHHHD"
FT   CDS             complement(177828..178634)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0133"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAL9"
FT                   /protein_id="CAP06531.1"
FT                   /translation="MPPRSPSFLVHIWRLFFAKGPNYSLPYAFLCIFVSVLVFLPIGLW
FT                   LTLPSFLNFKHSLTPIKTLFLTCTEPPCLPEPFFSDILHLSADSPPALQTFSTKSAEHF
FT                   LNELGVFSFISIEKVPDHKGLAISYALHTPLAFLGNQTHTFIGYEGQTFPALPFFQSLE
FT                   LPTVFFSQQALSQTRIPHQTLSIVTSLIDQLQMDPPSIIDLSQIDHYPGEFVVSLSSGT
FT                   LLRFRKDSFLPGIQHYQQALSLGAFSPQQAVICDLRCEDYLLLKRK"
FT   misc_feature    complement(178248..178310)
FT                   /note="PS00079 Multicopper oxidases signature 1."
FT                   /inference="protein motif:Prosite:PS00079"
FT   misc_feature    complement(178491..178559)
FT                   /note="1 probable transmembrane helix predicted for CTL0133
FT                   by TMHMM2.0 at aa 26-48"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             178788..179120
FT                   /transl_table=11
FT                   /gene="rbsV"
FT                   /locus_tag="CTLon_0134"
FT                   /product="anti-sigma F factor antagonist"
FT                   /db_xref="GOA:B0BAM0"
FT                   /db_xref="InterPro:IPR003658"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM0"
FT                   /protein_id="CAP06532.1"
FT                   /translation="MEWIAREYKNIFIVSLKGDMDAVTVPALEEFLTKSIAKGRVNVLL
FT                   NMEKVFYMSSAGLRTLLSLAKLTQNHNGKLCICCLRDEVADIIRIAGLDKVITIRKAEQ
FT                   ESFSDF"
FT   misc_feature    178791..179105
FT                   /note="HMMPfam hit to PF01740, STAS domain, score 7.2e-28"
FT                   /inference="protein motif:HMMPfam:PF01740"
FT   CDS             179124..180143
FT                   /transl_table=11
FT                   /gene="miaA"
FT                   /locus_tag="CTLon_0135"
FT                   /product="tRNA delta(2)-isopentenylpyrophosphate
FT                   transferase"
FT                   /db_xref="GOA:B0BAM1"
FT                   /db_xref="InterPro:IPR018022"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAM1"
FT                   /protein_id="CAP06533.1"
FT                   /translation="MSSSSSSGAATGFAVCSDPQKSFSKMFKRTVILLAGPTGSGKTAV
FT                   SLKLAPLVDGEIISVDSMQVYQGMDIGTAKVSLADRKEVPHHLIDVCHVQESFNAVDFY
FT                   YHAVQACQDILSRNKVPILVGGTGFYFHTFLSGPPSGPSPDFVLREQLTLEAQERGISA
FT                   LYQELELLDPVYAATITKHDKNKIIRALEIIRKTGSKVSSYAWQSTVNESKEYHCRGWL
FT                   LSPDPELLRHNILERCDQMLEEGLLDEVQALLAAGIKGNSSASRAIGYREWIEFLDLGS
FT                   PPDLFEITKQKFITNTWRYTKKQRTWFKRYSLFRELRPMGMTLDDMAKKIAQDYFLCG"
FT   sig_peptide     179124..179195
FT                   /gene="miaA"
FT                   /locus_tag="CTLon_0135"
FT                   /note="Signal peptide predicted for CTL0135 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.615) with cleavage site
FT                   probability 0.302 between residues 24 and 25"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    179229..179252
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    179310..180083
FT                   /note="HMMPfam hit to PF01715, IPP transferase, score
FT                   2.7e-72"
FT                   /inference="protein motif:HMMPfam:PF01715"
FT   CDS             complement(180148..181200)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0136"
FT                   /product="conserved hypothetical protein"
FT                   /note="Note the PF04055;Radical SAM superfamily motif"
FT                   /db_xref="GOA:B0BAM2"
FT                   /db_xref="InterPro:IPR020050"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM2"
FT                   /protein_id="CAP06534.1"
FT                   /translation="MGSPARTSFQEGLRLFLYSPLEELRIHADSLRKQRYPQNTITYVL
FT                   DANPNYTNICKIDCAFCAFYRKPRSSDAYLLSFDEFRQLMQRYVQAGIKTVLLQGGVHP
FT                   QIGIDYLETLVSITKKEFPSLHPHFFSAVEIAHAAQISGISTEQALERLWEAGQRTIPG
FT                   GGAEILSERIRKQISPKKMGPDGWIQFHKLAHRLGFRSTATMMFGHVESPEDILLHLQT
FT                   LRDAQDENPGFFSFIPWSYKPNNTALGRRVPHQASPELYYRILAVARIFLDNFDHIAAS
FT                   WFGEGKEEGVKGLFYGADDFGGTILDESVHKCTGWDLQSSEKEICAMLLQAGFTPVERD
FT                   TFYRPLSLAR"
FT   misc_feature    complement(180532..181056)
FT                   /note="HMMPfam hit to PF04055, Radical SAM
FT                   superfamily,score 7.7e-20"
FT                   /inference="protein motif:HMMPfam:PF04055"
FT   CDS             181290..182972
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0137"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM3"
FT                   /protein_id="CAP06535.1"
FT                   /translation="MDIPEQGSNTPEVEQAACCNQEAAENDRAKDKLSSSEISAEAVQS
FT                   CESMEAFEQVVAERSSIEEKILFALEQMGALLKGADQNSDLKLFWNVRKFCLPLFQQLE
FT                   DPVQRANLWGRYTELTREGRYIKTLQDEEGAFLVGQIELAISCLESGVQGFFSKTEKEE
FT                   ISEEDRAALEIPSLSAHKDFYLSTHADLRWLGSFSSQIINLRKELMNISMRMRLKSQFF
FT                   QKLSVLGNKVFPRRKELTEKVSELFAQDVEAFVERYFSRASRESLKKSVFFLRKEIKRL
FT                   QQAAKYLSISSGVFSSTRLGLSQCWDQLKGLEKEIRQEQSRLAATSAENMKEVQGRLDQ
FT                   VEVLLQENEEVHKIRKEIEAISKHIRGISLVHDDVVLLKGRIQTLLGEVREREAVIEKE
FT                   MKELQAKAEQARAEAIQALENEVQSFCDQCNKGDLPEGAKERCQELKEAVKKMAYLPYA
FT                   KKVALDNQINAAQRSVLARLEEQMLACPDEKVLNMRQVLEQRMLRRKELKAKFECDKKL
FT                   LGGSGLDFDRALQYSAMVEEDRKALEELDAAIIELKRQIQQFV"
FT   CDS             183426..183785
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0138"
FT                   /product="conserved hypothetical protein"
FT                   /note="Note the Pfam PF02410;Domain of unknown function
FT                   associated with iojap superfamily proteins"
FT                   /db_xref="InterPro:IPR004394"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM4"
FT                   /protein_id="CAP06536.1"
FT                   /translation="MDSFCLNLLKVIVKAIDNKKGRNPVVLDVQNISQLTDYFVFVEGN
FT                   VGVHIKAIADTIIEELKKLKVYPLNVEGLSHSDWVVIDYGFIVIHLFVSSVREQYCLEE
FT                   LWKDGAIITSDCLAS"
FT   misc_feature    183441..183746
FT                   /note="HMMPfam hit to PF02410, Domain of unknown function
FT                   DUF143, score 6.6e-55"
FT                   /inference="protein motif:HMMPfam:PF02410"
FT   CDS             183796..185052
FT                   /transl_table=11
FT                   /gene="fabF"
FT                   /locus_tag="CTLon_0139"
FT                   /product="3-oxoacyl-[acyl-carrier-protein] synthase"
FT                   /db_xref="GOA:B0BAM5"
FT                   /db_xref="InterPro:IPR018201"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM5"
FT                   /protein_id="CAP06537.1"
FT                   /translation="MNKKRVVVTGMGIVSCLGNEVESFYDSLLAGISGVRTITSFPCDD
FT                   YATRFAGWIEEFNSEPYLDKKQVRRVDPFITYAVVAAKKAIAMSRWDQDTLPADSHRCG
FT                   VIIGSGMGGLRTLDEGIEKLSAGNRKLSPFFIPYIITNMAPALIAMDYGLMGPNYSIST
FT                   ACATANYCIDAAYQHLIEGRADVIVCGGTEAAINRVGLAGFIANRALSERNDAPEQASR
FT                   PWDRDRDGFVLGEGAGILVLETLDNALKRGAPIFAEVLGTYKTCDAFHITAPRDDGEGI
FT                   TACILGALNKAGIPKERVNYINAHGTSTPLGDLSEVLALKKAFGSHVKNLRMNSTKSLI
FT                   GHCLGAAGGVEAVATIQAIQTGKLHPTINVENPIAEIEEFDVVANKAQDWDVDVAMSNS
FT                   FGFGGHNSTILFSRYEPSL"
FT   misc_feature    183805..184539
FT                   /note="HMMPfam hit to PF00109, Beta-ketoacyl
FT                   synthase,N-terminal do, score 8.7e-87"
FT                   /inference="protein motif:HMMPfam:PF00109"
FT   misc_feature    183811..183843
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   misc_feature    184024..184050
FT                   /note="PS00205 Transferrins signature 1."
FT                   /inference="protein motif:Prosite:PS00205"
FT   misc_feature    184261..184311
FT                   /note="PS00606 Beta-ketoacyl synthases active site."
FT                   /inference="protein motif:Prosite:PS00606"
FT   misc_feature    184561..185037
FT                   /note="HMMPfam hit to PF02801, Beta-ketoacyl
FT                   synthase,C-terminal do, score 2.7e-64"
FT                   /inference="protein motif:HMMPfam:PF02801"
FT   CDS             185049..185501
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0140"
FT                   /product="conserved hypothetical protein"
FT                   /note="Note the Pfam PF00293;NUDIX domain"
FT                   /db_xref="GOA:B0BAM6"
FT                   /db_xref="InterPro:IPR020084"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM6"
FT                   /protein_id="CAP06538.1"
FT                   /translation="MMKTKHEYSFGVIPIRFFGTPDRSTLKACFICHTDGKHWGFPKGH
FT                   AEEKEGPQEAAERELVEETGLGIVNFFPKIFVENYSFNDKEEIFVRKEVTYFLAEVKGE
FT                   VHADPDEICDVQWLSFQEGLRLLNFPEIRNIVTEADKFVQSYLFAS"
FT   misc_feature    185064..185480
FT                   /note="HMMPfam hit to PF00293, NUDIX domain, score 6.9e-25"
FT                   /inference="protein motif:HMMPfam:PF00293"
FT   misc_feature    185178..185237
FT                   /note="PS00893 mutT domain signature."
FT                   /inference="protein motif:Prosite:PS00893"
FT   CDS             complement(185582..186211)
FT                   /transl_table=11
FT                   /gene="ppa"
FT                   /locus_tag="CTLon_0141"
FT                   /product="inorganic pyrophosphatase"
FT                   /db_xref="GOA:B0BAM7"
FT                   /db_xref="InterPro:IPR008162"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAM7"
FT                   /protein_id="CAP06539.1"
FT                   /translation="MSKTPLSIAHPWHGPVLTRDDYESLCCYIEITPADSVKFELDKET
FT                   GILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEK
FT                   NITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHY
FT                   FLTYKATPESLIQAKPAKIEIVGLYGKKEAQKVIRLAHEDYCNLFM"
FT   misc_feature    complement(185594..186133)
FT                   /note="HMMPfam hit to PF00719, Inorganic
FT                   pyrophosphatase,score 5.8e-16"
FT                   /inference="protein motif:HMMPfam:PF00719"
FT   misc_feature    complement(185918..185938)
FT                   /note="PS00387 Inorganic pyrophosphatase signature."
FT                   /inference="protein motif:Prosite:PS00387"
FT   CDS             186459..187499
FT                   /transl_table=11
FT                   /gene="ldh"
FT                   /locus_tag="CTLon_0142"
FT                   /product="leucine dehydrogenase"
FT                   /db_xref="GOA:B0BAM8"
FT                   /db_xref="InterPro:IPR016211"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM8"
FT                   /protein_id="CAP06540.1"
FT                   /translation="MKYSLQIEDLHIEGYEQVLKVTCESVQLVAVIAIHQTKVGPALGG
FT                   IRAFPYLQFEDGLQDALRLSKAMTYKALLSSTETGGGKSVIFLPKGMTSPTEGMLRAFG
FT                   QAVNSLQGKYIAAEDVGVSVQDVMIIREETPYVCGLVTVSGDPSIYTAHGVFLCIQETA
FT                   DYLWKTDIRGKRVAVQGLGAVGRKLVHELFFAGAELIVYDTRKDLLDEVVTLYGAQVDE
FT                   NIISSDCDILCPCALGGIINSMSIDQLRCRAIVGATNNQLENPAIGRELVARGILYAPD
FT                   YLANAGGLLNVAGSVGRAYSPKEVLSKVEGLPKILRKLYEQGAKENRDTGTLADAIVEE
FT                   RLAVYA"
FT   misc_feature    186501..186872
FT                   /note="HMMPfam hit to PF02812, Glu/Leu/Phe/Val
FT                   dehydrogenase, dimeri, score 5.1e-18"
FT                   /inference="protein motif:HMMPfam:PF02812"
FT   misc_feature    186810..186851
FT                   /note="PS01109 Ribosomal protein L10 signature."
FT                   /inference="protein motif:Prosite:PS01109"
FT   misc_feature    186888..187496
FT                   /note="HMMPfam hit to
FT                   PF00208,Glutamate/Leucine/Phenylalanine/Valin, score 3e-23"
FT                   /inference="protein motif:HMMPfam:PF00208"
FT   CDS             complement(187465..188493)
FT                   /transl_table=11
FT                   /gene="cysQ"
FT                   /locus_tag="CTLon_0143"
FT                   /product="3'(2'),5'-bisphosphate nucleotidase"
FT                   /db_xref="GOA:B0BAM9"
FT                   /db_xref="InterPro:IPR015880"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAM9"
FT                   /protein_id="CAP06541.1"
FT                   /translation="MFSLLNDCQKAAETVVMQAMLSLMRYRKAHKFIPFWKKPDQTYVT
FT                   PADYAIQYYFYQKLTSLFPHIPLVGEETLNPATDHPRIPQILQFAQQLDPKVSCQDLYQ
FT                   ALSPESSHSSLFWLTDPIDGTSGFIKQRCFAIALSLFYEHTPVLSVIACPSSKNNSFKI
FT                   YSAAKGEGLTICNPTHSFPFSLHEDFQPTCKFCEASLSARNHQHLATHILSKHLPWNPQ
FT                   PIRADSQCKYAWVADNTVDFFIRIPYSPPRAHYRDHAPGVFLIEEAGGLVTDISGNPLP
FT                   FSNPNLYLDRHPLILASANEQMHSTILETLYKLRHQATQNMLPLATHVSATKHKQLSAL
FT                   QL"
FT   misc_feature    complement(187534..188484)
FT                   /note="HMMPfam hit to PF00459, Inositol monophosphatase
FT                   family, score 2.1e-66"
FT                   /inference="protein motif:HMMPfam:PF00459"
FT   CDS             188791..189552
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0144"
FT                   /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
FT                   /db_xref="GOA:B0BAN0"
FT                   /db_xref="InterPro:IPR002123"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN0"
FT                   /protein_id="CAP06542.1"
FT                   /translation="MKIGFWRRLYEVCYTSLIGCALKLRYRVLVEGIESINQNSQKGAL
FT                   FLSNHVAEIDPVILEHVFWLKFHVRPIAVDYLFNNPVVKWFLDSVRAIPVPSVVPGRDD
FT                   KRLLERIERFYVCVTQALDRKESLLLYPSGRLSRNGKEEIVNQQAAYTILHRAKECDVF
FT                   LVKITGLWGSSFSRYRTGSTPKLGKVFKEAVKALLRCGIFFMPKREVRVSVCPADYSVL
FT                   KQFPTKQEFNTFLSDWFNQEGGETPLEVPYA"
FT   misc_feature    188869..189294
FT                   /note="HMMPfam hit to PF01553, Acyltransferase, score
FT                   0.00014"
FT                   /inference="protein motif:HMMPfam:PF01553"
FT   CDS             189560..191173
FT                   /transl_table=11
FT                   /gene="aas"
FT                   /locus_tag="CTLon_0145"
FT                   /product="2-acylglycerophosphoethanolamine acyltransferase"
FT                   /db_xref="GOA:B0BAN1"
FT                   /db_xref="InterPro:IPR000873"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN1"
FT                   /protein_id="CAP06543.1"
FT                   /translation="MRDNRNTARSKRGKLRSEKTVLRSFLKLCAEMTTATVFWDEQLGK
FT                   LSYNQVYKAVCALATRLANYPDQHIGIMMPASAGAYIAYFATLLSGKIPVMINWSQGLR
FT                   EVTACANLVGVTHVITAKPLMQKLAQTHGEDAEYPFSLIFLDEVRKELSFLEKCRVGIC
FT                   MSIPFEWMMRWFGVFDKDPEDVAVILFTSGTEKLPKGVPLTNASLLANQRACFDCFSPK
FT                   EDDAMISFLPPFHAYGFNSCTLFPLLSGIPVVFAYNPLYAKKIVEMIDEAKVTLLGSTP
FT                   VFLSYIINAAKKSETTLPSLRFVVVGGDVFKHSLYQEALKTFPHVQLRQGYGTTECSPV
FT                   ITINTVNSPKHESCVGMPVRGMEVLIVSEETKVPVSTGVTGLVLTRGTSLFKGYLGEDF
FT                   GHGFIELAGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEAMESIIMEGCGQ
FT                   NAADHPLVVCGLPGEKERLCLFTIFPTSVSEVNDILKNSKTSNLLKISYHHQVEAIPML
FT                   GTGKPDYCSLNALAKRLFSE"
FT   misc_feature    189698..190945
FT                   /note="HMMPfam hit to PF00501, AMP-binding enzyme, score
FT                   1.3e-87"
FT                   /inference="protein motif:HMMPfam:PF00501"
FT   misc_feature    189764..189832
FT                   /note="1 probable transmembrane helix predicted for CTL0145
FT                   by TMHMM2.0 at aa 69-91"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             191216..192349
FT                   /transl_table=11
FT                   /gene="bioF"
FT                   /locus_tag="CTLon_0146"
FT                   /product="8-amino-7-oxononanoate synthase"
FT                   /db_xref="GOA:B0BAN2"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN2"
FT                   /protein_id="CAP06544.1"
FT                   /translation="MKEALSIDFITNDFLGFSRLDSLVHAVEARYRLYCRDKPHAQLGY
FT                   GGSRAILGSSSLLDGVEHQIAHFHGAPEALILPSGFVANTAICAHLSSVADYVLWDEQV
FT                   HISVSYNLSVFLSGWHQSFRHNDLDHLESLLESCQQRGFQRVFILVCSVYSFKGSFAPL
FT                   EQIVALSHQYHAQLIVDEAHAVGLFGDAGKGFCASLGYENFYSVLVTFSKALGSAGAAW
FT                   LSSCDRKQDLIKEPMVSLSTGIPPYLLVSIQVAYEFLSQEGELARTRLRRIRDYFAQKI
FT                   SWAAAGFVQPLSLPGISEQELYQKLVATGIRVGVACPPTGKVLRANLHAFNTEQEVDIL
FT                   VSLLATEQVTYQKNVVTGSTSTMQRTLEDNFAAANAS"
FT   misc_feature    191225..192247
FT                   /note="HMMPfam hit to PF00155, Aminotransferase class I and
FT                   II, score 1.3e-15"
FT                   /inference="protein motif:HMMPfam:PF00155"
FT   misc_feature    191843..191872
FT                   /note="PS00599 Aminotransferases class-II
FT                   pyridoxal-phosphate attachment site."
FT                   /inference="protein motif:Prosite:PS00599"
FT   CDS             complement(192268..194529)
FT                   /transl_table=11
FT                   /gene="priA"
FT                   /locus_tag="CTLon_0147"
FT                   /product="primosomal protein N'"
FT                   /db_xref="GOA:B0BAN3"
FT                   /db_xref="InterPro:IPR014021"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN3"
FT                   /protein_id="CAP06545.1"
FT                   /translation="MDPTHQPFRLYAEVIVNANINKILDYGIPAELENLVTVGSVVKVP
FT                   LQRKLTNDKYKIAIVLKIKSSSDFVHVIQPILDISYEGITLPQDLIDLIFWISQYYFCP
FT                   LGSAVSLFLPTVYAQTHSTKHQNNVFLGQNAERTQEILKTLDNPQQIAVLRKLLKTTKP
FT                   LTPPELMRKTEVSAKTLDALVKQKFIRIVDSADLEIQDEQLHYFLPETPTLNQEQLDAI
FT                   NTISQSLVAEQFQTCLLFGVTGSGKTEVYLQVIRKARALGKSVILLVPEVALTIQTLSF
FT                   FKMHFGSEVGVLHYKLSDSERTQTWHKASRGLINIIIGPRSAIFCPIQNLGLIIVDEEH
FT                   DSAYKQSDLPPFYQARDVAVMRGKMTNATVILGSATPSLESYTNALSKKYTLSVLSKRA
FT                   STSTPTKVFLIDMNLEIEKTRKKPFFSQTVIRSIEQRLEVGEQTIIFFNRRGFHTNVSC
FT                   SSCKYTLKCPHCDMILTFHKTERILLCHLCNTRLSKPITSCPQCLGTMTLQYRGAGTEK
FT                   IETLLREFFPTARTIRLDSDTTRFRGSHDALVKQFATGKADILIGTQMIAKGMHFPAVT
FT                   LSVVLSGDSGLYIPDFRAAEQVFQLITQVTGRSGRSHLPGEVLIQTFLPQNSTISHALA
FT                   QDFPAFYKEEILGRKVCNYPPFTRLIRCIFLGKCSDYTLKETQRVHTLIKQNLDSQASL
FT                   MEISPCGHFKVKDLFHYQFLIKTRNILVANKQIQEALAAAKLSSKVRCIVDVDPVTTFF
FT                   "
FT   misc_feature    complement(192691..192963)
FT                   /note="HMMPfam hit to PF00271, Helicase conserved
FT                   C-terminal domain, score 0.0083"
FT                   /inference="protein motif:HMMPfam:PF00271"
FT   misc_feature    complement(193375..193887)
FT                   /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score
FT                   5.1e-08"
FT                   /inference="protein motif:HMMPfam:PF00270"
FT   misc_feature    complement(193393..193899)
FT                   /note="HMMPfam hit to PF04851, Type III restriction
FT                   enzyme,res subunit, score 1e-07"
FT                   /inference="protein motif:HMMPfam:PF04851"
FT   misc_feature    complement(193786..193809)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             complement(194484..195173)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0148"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN4"
FT                   /protein_id="CAP06546.1"
FT                   /translation="MHSLTVFQEIFNRYTEKPYPATSILVPLYFPEEPLTFSEDLSPST
FT                   APILNPPGLEPQALPVETPKDPVTTSIPPPSHPKESKHSWACVPIYPGLSHEELLKENY
FT                   PALKRYIQRPARASCGIFVHESQEHEILFFNRLAKILSQKIFPTRLVLFYQKTLSDFSH
FT                   SPHPFCLAPLPTIRYKNSQVNYHDPVLHDKVTCIPIYSSSQYEKDSALKRDLWTLLTSL
FT                   SASMQKS"
FT   CDS             195329..195823
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0149"
FT                   /product="protein disulfide isomerase"
FT                   /db_xref="GOA:B0BAN5"
FT                   /db_xref="InterPro:IPR017936"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN5"
FT                   /protein_id="CAP06547.1"
FT                   /translation="MRNWLLGSLLIACMAVTAPCFAAKRRAAGSQKINRVAETGIHWMS
FT                   YQDALNKAKQEGKHVAVFFTGSDWCIWCMRMQDQILQTAAFSEFAKQYLCMVEIDFPHN
FT                   KEQTAEQKEQNRHLKSLYSVDGFPTLVFLDSEGKEVAKMGFEPGGGEAYVYRLKQALHI
FT                   S"
FT   sig_peptide     195329..195394
FT                   /locus_tag="CTLon_0149"
FT                   /note="Signal peptide predicted for CTL0149 by SignalP 2.0
FT                   HMM (Signal peptide probability 1.000) with cleavage site
FT                   probability 0.957 between residues 22 and 23"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    195335..195367
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   misc_feature    195338..195397
FT                   /note="1 probable transmembrane helix predicted for CTL0149
FT                   by TMHMM2.0 at aa 4-23"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             196055..197635
FT                   /transl_table=11
FT                   /gene="lysS"
FT                   /locus_tag="CTLon_0150"
FT                   /product="lysyl-tRNA synthetase"
FT                   /db_xref="GOA:B0BAN6"
FT                   /db_xref="InterPro:IPR004365"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAN6"
FT                   /protein_id="CAP06548.1"
FT                   /translation="MSVEVEYLQHEDYLYRTSKLKEIRDLGINPYPYQYTDCLEVQEIR
FT                   NQFVDNELGDSEAAFRKETPKVRFAGRLVLFRSMGKNAFGQILDNDAKIQVMFNRDFSA
FT                   VAGLAADAGISPIKFIEKKLDLGDILGLEGYLFFTHSGELTVLVETVTLLCKSLISLPD
FT                   KHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTV
FT                   YGGAEATPFVTTLQALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP
FT                   EFTMIEAYAAYWDYNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIR
FT                   MTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVCDKL
FT                   IAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPLQQRKLLEE
FT                   QMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV
FT                   MRRIEAKKD"
FT   misc_feature    196253..196516
FT                   /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding
FT                   domain, score 1.3e-12"
FT                   /inference="protein motif:HMMPfam:PF01336"
FT   misc_feature    196562..197614
FT                   /note="HMMPfam hit to PF00152, tRNA synthetases class II
FT                   (D, K and N), score 4.5e-128"
FT                   /inference="protein motif:HMMPfam:PF00152"
FT   misc_feature    196862..196915
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT                   /inference="protein motif:Prosite:PS00179"
FT   misc_feature    197531..197560
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT                   /inference="protein motif:Prosite:PS00339"
FT   CDS             complement(197632..199125)
FT                   /transl_table=11
FT                   /gene="cysS"
FT                   /locus_tag="CTLon_0151"
FT                   /product="cysteinyl-tRNA synthetase"
FT                   /db_xref="GOA:B0BAN7"
FT                   /db_xref="InterPro:IPR015804"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN7"
FT                   /protein_id="CAP06549.1"
FT                   /translation="MKGWIRSNSTKTRPFRMNTAIDLFLYNTLSREKERFLPVNDPVKL
FT                   YTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGYSVYHVMNITDVDDKTLAGARKKGCS
FT                   LEKYCQPYIHAFFADLETLHILKADAYPHATHYIPQMIEAIQQLINQGVAYIGQDQSVY
FT                   FSISQFPNYGALSHLNLEELRNSARIDADEYDKDNLCDFVLWKAYDPDRDGEIFWESPF
FT                   GKGRPGWHLECSIMSMSLLGQSLDIHAGGVDNIFPHHENEIAQSESLSHKPFVRYWLHS
FT                   HHLLVDRKKMSKSLGNFFTLRDLLDQGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQS
FT                   LKRLRDFICRLEDPSYPDDIIHPEVATACQSFLETFITSLTNDLNISSSLAALFDFIRK
FT                   INSSIDQHTGIQTETDSSVFSKQDAQHILALLRKIDQVLGVLPFSQPDIPEEVLLLVEQ
FT                   REAARKVKNWQEADRLRDEILSRGFAIEDGKTGMKVKKL"
FT   misc_feature    complement(198109..199020)
FT                   /note="HMMPfam hit to PF01406, tRNA synthetases class I (C)
FT                   catalytic d, score 1.7e-135"
FT                   /inference="protein motif:HMMPfam:PF01406"
FT   CDS             199378..200427
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0152"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAN8"
FT                   /protein_id="CAP06550.1"
FT                   /translation="MSSLRIARSCSFKQKTLLAALVFFGLGASQVCATPSNSREIAWYV
FT                   DYQEARDESREKDLPMLLFFSGSDWNGSCMKIRDEVLSSSDFISAVADQFVCVVVDFPR
FT                   HTELRDPLINEQNEDLKNRLYVNTFPSLVLLSPEERAIYKIESFGNENGSNLGESLCRV
FT                   IANDQELEQVFPLIPTLSSVALRKYYQLAEELSRKDFMATALEQGVLCDDSFFLSEKFR
FT                   QLVEAGRMDSEECRAVKNRLLELDPENEQLTHFTVALIEFQELAKRSQGQSHVNVAEVI
FT                   APLAEYLTQFGEQDKENQWRLEMIISQYYLDAGLPNSALEHAKIAFESAPQDIQSSISR
FT                   SLVHIEHQS"
FT   sig_peptide     199378..199476
FT                   /locus_tag="CTLon_0152"
FT                   /note="Signal peptide predicted for CTL0152 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.999) with cleavage site
FT                   probability 0.759 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(200505..200867)
FT                   /transl_table=11
FT                   /gene="rnpA"
FT                   /locus_tag="CTLon_0153"
FT                   /product="ribonuclease P protein component"
FT                   /db_xref="GOA:B0BAN9"
FT                   /db_xref="InterPro:IPR014721"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAN9"
FT                   /protein_id="CAP06551.1"
FT                   /translation="MSRLTLPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNT
FT                   SKVGITVSKKFGKAHQRNRFKRIVREAFRHVRPNLPGCQVVISPRGNSQPDFLKLSEEL
FT                   LQRIPEALPLASSSRC"
FT   misc_feature    complement(200532..200852)
FT                   /note="HMMPfam hit to PF00825, Ribonuclease P, score
FT                   3.3e-14"
FT                   /inference="protein motif:HMMPfam:PF00825"
FT   misc_feature    complement(200658..200702)
FT                   /note="PS00648 Bacterial ribonuclease P protein component
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00648"
FT   CDS             complement(200880..201017)
FT                   /transl_table=11
FT                   /gene="rnpA"
FT                   /locus_tag="CTLon_0154"
FT                   /product="ribonuclease P protein component"
FT                   /db_xref="GOA:B0BAP0"
FT                   /db_xref="InterPro:IPR000271"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAP0"
FT                   /protein_id="CAP06552.1"
FT                   /translation="MKRTYQPSKRKRRNSVGFRARMATKSGRNLLNRRRRHGRHSLIDL
FT                   "
FT   CDS             201494..201631
FT                   /transl_table=11
FT                   /gene="rpmJ"
FT                   /locus_tag="CTLon_0155"
FT                   /product="LSU ribosomal protein L36P"
FT                   /db_xref="GOA:B0BAP1"
FT                   /db_xref="InterPro:IPR000473"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAP1"
FT                   /protein_id="CAP06553.1"
FT                   /translation="MRVSSSIKADPSKGDKLVRRKGRLYVINKKDPNRKQRQAGPARKK
FT                   "
FT   CDS             201655..201960
FT                   /transl_table=11
FT                   /gene="rpsN"
FT                   /locus_tag="CTLon_0156"
FT                   /product="SSU ribosomal protein S14P"
FT                   /db_xref="GOA:B0BAP2"
FT                   /db_xref="InterPro:IPR018271"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAP2"
FT                   /protein_id="CAP06554.1"
FT                   /translation="MAKKSAVAREVKRRKLVEANFQKRAELRKLAKSLSVSEEERERAR
FT                   EALNKMRRDTSPSRLHNRCLLTGRPRGYLRKFAISRICFRQMASMGDIPGVVKASW"
FT   misc_feature    201790..201954
FT                   /note="HMMPfam hit to PF00253, Ribosomal protein
FT                   S14p/S29e,score 7.6e-23"
FT                   /inference="protein motif:HMMPfam:PF00253"
FT   misc_feature    201841..201909
FT                   /note="PS00527 Ribosomal protein S14 signature."
FT                   /inference="protein motif:Prosite:PS00527"
FT   CDS             complement(201994..202494)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0157"
FT                   /product="putative exported protein"
FT                   /db_xref="InterPro:IPR018253"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAP3"
FT                   /protein_id="CAP06555.1"
FT                   /translation="MNSGMFPFTFFLLYICLGMLTAYLANKKNRNLIGWFLAGMFFGIF
FT                   AIIFLLILPPLPSSTQDNRSMDQQDSEEFLLQNTLEDSEIISIPDTMNQIAIDTEKWFY
FT                   LNKDCTNVGPISIVQLTAFLKECKHSPEKGIDPQELWVWKKGMPNWEKVKNIPELSGTV
FT                   KDE"
FT   misc_feature    complement(order(202336..202404,202423..202482))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CTL0156 by TMHMM2.0 at aa 5-24 and 31-53"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(202396..202455)
FT                   /note="PS00636 Nt-dnaJ domain signature."
FT                   /inference="protein motif:Prosite:PS00636"
FT   sig_peptide     complement(202423..202494)
FT                   /locus_tag="CTLon_0157"
FT                   /note="Signal peptide predicted for CTL0156 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.731) with cleavage site
FT                   probability 0.324 between residues 24 and 25"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(202616..202867)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0158"
FT                   /product="putative integral membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAP4"
FT                   /protein_id="CAP06556.1"
FT                   /translation="MNSNIEYRQYRIDILSCFICLLMMVWTLVSIKLGDSLGGIIPGCL
FT                   GYLLAKRKHRRPVRWFFLTFFFGIASGIFLVVLHPKQK"
FT   misc_feature    complement(order(202631..202699,202718..202771,
FT                   202781..202834))
FT                   /note="3 probable transmembrane helices predicted for
FT                   CTL0157 by TMHMM2.0 at aa 12-29, 33-50 and 57-79"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             203147..203641
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0159"
FT                   /product="hypothetical protein"
FT                   /db_xref="InterPro:IPR005531"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAP5"
FT                   /protein_id="CAP06557.1"
FT                   /translation="MDKQRLKLDVKEIEFPETVFSRDIETRVIQVIILHCLAKIDGVSL
FT                   LGGNLIDTLFGRDIERMKGIYVEQDSKNSLVKVRVEVNVDYGVSIPEKTEEIQGCIVSE
FT                   ISEYTGLHVAAVHVVVKGLTHPKAKDEEVPAIEVIEEPCLEELPSAEEYLEEVSVIQTE
FT                   E"
FT   misc_feature    203198..203518
FT                   /note="HMMPfam hit to PF03780, Protein of unknown function
FT                   (DUF322), score 6.5e-43"
FT                   /inference="protein motif:HMMPfam:PF03780"
FT   CDS             complement(203688..205427)
FT                   /transl_table=11
FT                   /gene="uvrC"
FT                   /locus_tag="CTLon_0160"
FT                   /product="excinuclease ABC subunit C"
FT                   /db_xref="GOA:B0BAP6"
FT                   /db_xref="InterPro:IPR004791"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAP6"
FT                   /protein_id="CAP06558.1"
FT                   /translation="MKDSQGTVLYVGKAKNLRNRLSSYLQKKGDSRERIPFLMKKTTDI
FT                   DTIVVSNETEAILLENNLIKKYQPRYNVLLKDDKTFFCLSVSLEHPWPRIEAIRTRALS
FT                   PGKKKQWLFGPYVSAEACYALLEVISLWFPLRTCSDREFSTRQRPCVLYEMKRCLAPCV
FT                   GLCSQTEYQETLDKAILFLKGDVRSTISNLEKAIEKASQEQKFEHAAALYRTLTLIRQT
FT                   MAKQHVEKFQAYDIDVLGLYRKGSLAIVSVLSVYSGKLLGARYFIFPENAQEDSALFSS
FT                   FILQYYAENPRIPKEIFVPVSLDSPELPYLLNTAEPPKIRCPKTEYGKELLALAHKNAA
FT                   EQAKPFNSITPPYEELQHFFNLSQYPYRIECYDNAHLQGEHNVGVCIVFENDLFSPKQY
FT                   RTFSITSHGDDLAAFEEVLTRRFRSLTTELPNLIVIDGGRNQFKRAQRILEELNLTGIT
FT                   VVTIAKESGNHSKSLRQEKLFCETFPQGILLHPTSAILQFFQLLRDEAHRFAIQHYRKK
FT                   HAKAVLTTKKIPGIGEVKTKRLLQKFKSWKRVFIASEEELKTVQGITAKDIQRIQEEGA
FT                   KPE"
FT   misc_feature    complement(203895..204362)
FT                   /note="HMMPfam hit to PF08459, UvrC Helix-hairpin-helix
FT                   N-terminal, score 7.1e-73"
FT                   /inference="protein motif:HMMPfam:PF08459"
FT   misc_feature    complement(205194..205427)
FT                   /note="HMMPfam hit to PF01541, GIY-YIG catalytic
FT                   domain,score 1.2e-22"
FT                   /inference="protein motif:HMMPfam:PF01541"
FT   CDS             complement(205509..207971)
FT                   /transl_table=11
FT                   /gene="mutS"
FT                   /locus_tag="CTLon_0161"
FT                   /product="DNA mismatch repair protein"
FT                   /db_xref="GOA:B0BAP7"
FT                   /db_xref="InterPro:IPR016151"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAP7"
FT                   /protein_id="CAP06559.1"
FT                   /translation="MTHKLTPMMQQWHQCKEQAGDCLLLFRLGEFYEAFFDDALILAQN
FT                   LDITLTQRQNVPMSGIPATCLDGYVDRLVSRGFKVAIAEQADNTEGSKGLVPRTINRLI
FT                   TPGALLSSSLLPEKANNYVLAINQVGSLYGLSCLDLSIGTFLVAEYDNTKDLIEAICRL
FT                   APTELLSHAKFYQKNAAVIKQLQQHLRITLSEYVSWAFEYQSATKKLYTCFQVSSLDGF
FT                   GLQGLVPAINAAGALLSYIQDKLLLPISHLSIPKIYGQQKHLLIDKASQTNLELLSPIH
FT                   GEHGKGSLLQVMERTSTPMGGRLLRNTLINPFYDLKEITLRQDSVEFFLQQEDLRKILK
FT                   RQLSCVRDLERLATKISTSLATPKDIGTLRDSLLSCTHIADNLQNCALPEFLENKFLIA
FT                   PPLCSLIKTLSTELIQELPLKVSEGNIFANHYHPDLLRLRNIKENSKSWILEYQERIRN
FT                   ETGIKKLKVCYAQALGYYIEVASNLAPQLPKEFIRRQSRLHAERFTTQELQQFQDEVFS
FT                   VEDKLQTLETKLFKELCFYIVEHRDLILKLSTAVADLDYVVSLAELAAEYDYRRPLVDH
FT                   SDALSITKGMHPVALTLLDKGTFIPNDTVMHSAQTRMILLTGPNMAGKSTYIRQIALLV
FT                   IMAQMGSFIPARSAHIGIVDKIFTRIGAGDNLSKGMSTFMVEMAETANILHNATDRSLV
FT                   ILDEIGRGTSTYDGLAIAQAVVEFLLFTDGKKAKTLFATHYKELTELEMHCQHVENFHA
FT                   MVKENSGQPIFMYEIVKGHSKKSFGIHVAKLAGFPLSVVSRAQQILHQFEGPDLRPEPE
FT                   KAQQLVMF"
FT   misc_feature    complement(205557..206267)
FT                   /note="HMMPfam hit to PF00488, MutS domain V, score
FT                   5.9e-161"
FT                   /inference="protein motif:HMMPfam:PF00488"
FT   misc_feature    complement(205848..205898)
FT                   /note="PS00486 DNA mismatch repair proteins mutS family
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00486"
FT   misc_feature    complement(206097..206120)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    complement(206274..207191)
FT                   /note="HMMPfam hit to PF05192, MutS domain III, score
FT                   4.7e-74"
FT                   /inference="protein motif:HMMPfam:PF05192"
FT   misc_feature    complement(206409..206684)
FT                   /note="HMMPfam hit to PF05190, MutS family domain IV,score
FT                   9.7e-36"
FT                   /inference="protein motif:HMMPfam:PF05190"
FT   misc_feature    complement(207213..207611)
FT                   /note="HMMPfam hit to PF05188, MutS domain II, score
FT                   1.7e-38"
FT                   /inference="protein motif:HMMPfam:PF05188"
FT   misc_feature    complement(207633..207956)
FT                   /note="HMMPfam hit to PF01624, MutS domain I, score
FT                   1.9e-56"
FT                   /inference="protein motif:HMMPfam:PF01624"
FT   CDS             join(208034..208228,208228..208302)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0162"
FT                   /product="conserved hypothetical protein (pseudogene)"
FT                   /note="The sequence has been checked and is believed to be
FT                   correct."
FT                   /db_xref="PSEUDO:CAP06560.1"
FT   CDS             208304..210091
FT                   /transl_table=11
FT                   /gene="dnaG"
FT                   /locus_tag="CTLon_0163"
FT                   /product="DNA primase"
FT                   /db_xref="GOA:B0BAP9"
FT                   /db_xref="InterPro:IPR006154"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAP9"
FT                   /protein_id="CAP06561.1"
FT                   /translation="MYYTEESLETLKHSIDIVSVLGEYVHLKRSGADYKACCPFHDEKT
FT                   PSFIVYPTRGHYHCYGCGEHGDAINFLMKQQGYSFSEAVLFLAKKFHVDLVVRTRETSG
FT                   QDSKDSLRRINREAERFFQYCLLHLPEGEEALAYLYKRGFSPDTIDRFQIGYAPEQRLF
FT                   IQAMEERNISVKQLEWAGYLAKDWFLFAQRIMFPIQDALGYTIGFSSRRFKEGGRGGKY
FT                   INSPETILFKKSRVLYGLQFSRKRIAKERRVILVEGQADCLQMIDFGFNCTLAAQGTSF
FT                   TETHVHELVKLGVSKAYLLFDGDAAGEKASLRVGDLCQAAGITAIVCRLPSGQDPDSFL
FT                   MQRGPEELRELLDRGEDYLSFLVWHKIHSYEQFTPREKARVIEEVIQQVRCWGSPITIH
FT                   EYLRQLASLVKVPEPAVLSYLSSITSAAEDKGKKVSAKEPSSESEQTSTEGKISKKISP
FT                   RMILEADVIRCLLFAKPEDEFVPATVKQYLSPEEFHCAEYRAIFVMAMNHYNDRQTLPS
FT                   MDEMMSLVVGTEAMTLLVARRMNTELMRDIVVQSIQKLLDKHWRDRKRKLCHQTGKGLD
FT                   SLQEYVRLSGERVKVSLVS"
FT   misc_feature    208310..208603
FT                   /note="HMMPfam hit to PF01807, CHC2 zinc finger, score
FT                   3.8e-62"
FT                   /inference="protein motif:HMMPfam:PF01807"
FT   misc_feature    208667..209035
FT                   /note="HMMPfam hit to PF08275, DNA primase catalytic
FT                   core,N-terminal domai, score 5.8e-51"
FT                   /inference="protein motif:HMMPfam:PF08275"
FT   misc_feature    209054..209296
FT                   /note="HMMPfam hit to PF01751, Toprim domain, score
FT                   7.4e-17"
FT                   /inference="protein motif:HMMPfam:PF01751"
FT   CDS             210176..210463
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0164"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAQ0"
FT                   /protein_id="CAP06562.1"
FT                   /translation="MGFMRSLHFLLTAFTFSLFCGAALTASSPKTLSFVAAEAAGVGAA
FT                   RPSSVASLLDSAHEVAKSAGVGYGSAYILNELQNLQSQELEGLLASQENI"
FT   sig_peptide     210176..210250
FT                   /locus_tag="CTLon_0164"
FT                   /note="Signal peptide predicted for CTL0163 by SignalP 2.0
FT                   HMM (Signal peptide probability 1.000) with cleavage site
FT                   probability 0.832 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    210194..210253
FT                   /note="1 probable transmembrane helix predicted for CTL0163
FT                   by TMHMM2.0 at aa 7-26"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             210590..211081
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0165"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAQ1"
FT                   /protein_id="CAP06563.1"
FT                   /translation="MRFLLALFSLILVLPATEAFSTEDKQCQQEAEEDCSQVADTCVFY
FT                   SYAEGLEHARDEGKLTLVVLLDTSGYSFETLAYAAHAMESSLLSTFADFVVLSRREAVP
FT                   LIYPPVPDPMVGEIALFLEAFSDQTFPSQPVIVTLAIGASSAEIMDITEMPSINPEFVE
FT                   "
FT   sig_peptide     210590..210652
FT                   /locus_tag="CTLon_0165"
FT                   /note="Signal peptide predicted for CTL0164 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.999) with cleavage site
FT                   probability 0.861 between residues 21 and 22"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(211164..214175)
FT                   /transl_table=11
FT                   /gene="glyQ"
FT                   /locus_tag="CTLon_0166"
FT                   /product="glycyl-tRNA synthetase"
FT                   /db_xref="GOA:B0BAQ2"
FT                   /db_xref="InterPro:IPR015944"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAQ2"
FT                   /protein_id="CAP06564.1"
FT                   /translation="MSSQPLTLQAMMAAILNFWSEQGCIIHQGYDLEVGAGTFNPATFL
FT                   QSLGPEPFRTAYIEPSRRPQDGRYGQHPNRLQKYHQLQVILKPVPENFLSLYLESLKVI
FT                   GLNLVDHDIRFVHDDWENPTIGAWGLGWEVWLNGMEITQLTYFQAVGSKPLDAISGEIT
FT                   YGVERIAMYLQKKNSVYDVMWNGSLTYGDITQYAEQAWSQYNFETANTTMWLKHFDDFS
FT                   AEALATLDQGLPLPAYDFVIKASHAFNMLDSRGVISVTERTRYIAKIRQLARAAADKYV
FT                   AWRESLGFPLLKTPPSTPTVTPKKIPTICQPEDFLLEIGSEELPATFVPTGIQQLESLA
FT                   KKLLADHGIAYKHLEVLGTPRRLALCIEGLSHVTIRPESEKKGPPLSLLFMTDGSVSPQ
FT                   GEQFFPSHGLSISHRSALDQPSAICRVRSINGTDYLFLVIPEERKETAAILVNELPQLI
FT                   RSIRFPQKMTWDNGGVEYARPIRWLVALYGDQILPISLGFVSSGNTSWGHRQLDNRQLT
FT                   IPSSNMYVDTLRSACVIVSQKERRAIIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPF
FT                   VISAQFDPAFCSLPKELLIAEMIQHQRYFPTQNMQGEITNRFLIVCDNSPTDSIVEGNE
FT                   KALAPRLTDGNFLFKQDLLTPLSSFVEKLKSVTYFESLGSLADKTSRLKLHLEEAYALL
FT                   PLCAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHI
FT                   TLGSNISTTGALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSV
FT                   DIEDLFARLIRHFPSSIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEIIATVLTD
FT                   NCPKNPLTIIQSAQSIQELKNTQILKTIAATHNRLKKILASLSFSVTEQMFSLQSAEDL
FT                   LFKQALDRFVEETTALPISSKDYLHLLKELAQSTELFLDSVRVASDDESTRNQRIALLI
FT                   AAQKCFGFYAWDVL"
FT   misc_feature    complement(211167..211493)
FT                   /note="HMMPfam hit to PF05746, DALR anticodon binding
FT                   domain, score 0.0021"
FT                   /inference="protein motif:HMMPfam:PF05746"
FT   misc_feature    complement(211551..213233)
FT                   /note="HMMPfam hit to PF02092, Glycyl-tRNA synthetase beta
FT                   subunit, score 0"
FT                   /inference="protein motif:HMMPfam:PF02092"
FT   misc_feature    complement(213303..214154)
FT                   /note="HMMPfam hit to PF02091, Glycyl-tRNA synthetase alpha
FT                   subunit, score 2.3e-235"
FT                   /inference="protein motif:HMMPfam:PF02091"
FT   misc_feature    complement(213660..213689)
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT                   /inference="protein motif:Prosite:PS00339"
FT   CDS             214629..215237
FT                   /transl_table=11
FT                   /gene="pgsA"
FT                   /locus_tag="CTLon_0167"
FT                   /product="CDP-diacylglycerol--glycerol-3-phosphate
FT                   3-phosphatidyltransferase"
FT                   /db_xref="GOA:B0BAQ3"
FT                   /db_xref="InterPro:IPR004570"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAQ3"
FT                   /protein_id="CAP06565.1"
FT                   /translation="MRVSLPNFLTVFRLFITPIFMILYLKGRWFGLSAAFLPYVLLFLL
FT                   IITEITDAVDGYIARKFSQVTDLGKLLDPMADSVYRISLYLTFTQPPVNLPLILVFIFL
FT                   ARDSVISTLRTLCASRGQVLAARMSGKLKAILQAISFFFIIFSMFLCAKGIISTDDLEF
FT                   FSTVIVSLVAFYSICSGVEYIWVNKSHLLQKNDSPDGES"
FT   misc_feature    order(214641..214700,214713..214781,214872..214940,
FT                   215028..215096,215115..215183)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CTL0166 by TMHMM2.0 at aa 5-24, 29-51, 82-104, 134-156 and
FT                   163-185"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    214752..215186
FT                   /note="HMMPfam hit to PF01066, CDP-alcohol
FT                   phosphatidyltransferase, score 1.4e-32"
FT                   /inference="protein motif:HMMPfam:PF01066"
FT   misc_feature    214791..214859
FT                   /note="PS00379 CDP-alcohol phosphatidyltransferases
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00379"
FT   CDS             complement(215244..216668)
FT                   /transl_table=11
FT                   /gene="glgA"
FT                   /locus_tag="CTLon_0168"
FT                   /product="glycogen synthase"
FT                   /db_xref="GOA:B0BAQ4"
FT                   /db_xref="InterPro:IPR013534"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAQ4"
FT                   /protein_id="CAP06566.1"
FT                   /translation="MKIIHTAIEFAPVIKAGGLGDALYGLAKALAANHTTEVVIPLYPK
FT                   LFTLPKEQDLCSIQKLSYFFAGEQEATAFSYFYEGIKVTLFKLDTQPELFENAETIYTS
FT                   DDAFRFCAFSAAAASYIQKEGANIVHLHDWHTGLVAGLLKQQPCSQLQKIVLTLHNFGY
FT                   RGYTTREILEASSLNEFYISQYQLFRDPQTCVLLKGALYCSDFVTTVSPTYAKEILEDY
FT                   SDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENK
FT                   KALYERLGLSLEHSPCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHE
FT                   EFANLQESLANSPNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVP
FT                   LVRATGGLADTVANGINGFSFFNPHDFYEFRNMLLEAVTTYRTNHDKWQHIVRACLNFS
FT                   SDLETAANKYLEIYKQ"
FT   misc_feature    complement(215298..215825)
FT                   /note="HMMPfam hit to PF00534, Glycosyl transferases
FT                   group,score 0.00047"
FT                   /inference="protein motif:HMMPfam:PF00534"
FT   misc_feature    complement(215970..216665)
FT                   /note="HMMPfam hit to PF08323, Starch synthase catalytic
FT                   domain, score 1.5e-82"
FT                   /inference="protein motif:HMMPfam:PF08323"
FT   tRNA            216897..216968
FT                   /gene="tRNA-Gln"
FT                   /product="transfer RNA-Gln"
FT                   /anticodon=(pos:216929..216931,aa:Gln)
FT                   /note="tRNA Gln anticodon TTG, Cove score 54.26"
FT   CDS             217245..217802
FT                   /transl_table=11
FT                   /gene="rplY"
FT                   /locus_tag="CTLon_0169"
FT                   /product="LSU ribosomal protein L25"
FT                   /db_xref="GOA:B0BAQ5"
FT                   /db_xref="InterPro:IPR020055"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAQ5"
FT                   /protein_id="CAP06567.1"
FT                   /translation="MELVVQSRETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARV
FT                   FSKFLSTLESGALASTVFTLSYEGREIKALVKDIQYHVTTYDVIHLDFEELVDGRDVRL
FT                   NVPIRCINTVDCVGVKLGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDI
FT                   CIPEGIRPVTSLKEVAVTVARR"
FT   misc_feature    217251..217523
FT                   /note="HMMPfam hit to PF01386, Ribosomal L25p family,score
FT                   6.7e-09"
FT                   /inference="protein motif:HMMPfam:PF01386"
FT   CDS             217810..218349
FT                   /transl_table=11
FT                   /gene="pth"
FT                   /locus_tag="CTLon_0170"
FT                   /product="peptidyl-tRNA hydrolase"
FT                   /db_xref="GOA:B0BAQ6"
FT                   /db_xref="InterPro:IPR018171"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAQ6"
FT                   /protein_id="CAP06568.1"
FT                   /translation="MVKLVVGIGNPGRQYVWTRHNIGFLLLDSLASRFLGAFREAPRLY
FT                   ASFAKVEISSEAVVLMKPTTYVNLTGKAVLAAKKFFDVSMEDILVVADDINREFGFVRF
FT                   RQDCGSGGHNGIKNTTQILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLN
FT                   DFLEKGIEEIFPWLGC"
FT   misc_feature    217819..218343
FT                   /note="HMMPfam hit to PF01195, Peptidyl-tRNA
FT                   hydrolase,score 5.9e-48"
FT                   /inference="protein motif:HMMPfam:PF01195"
FT   misc_feature    217852..217893
FT                   /note="PS01195 Peptidyl-tRNA hydrolase signature 1."
FT                   /inference="protein motif:Prosite:PS01195"
FT   misc_feature    218134..218166
FT                   /note="PS01196 Peptidyl-tRNA hydrolase signature 2."
FT                   /inference="protein motif:Prosite:PS01196"
FT   CDS             218487..218825
FT                   /transl_table=11
FT                   /gene="rpsF"
FT                   /locus_tag="CTLon_0171"
FT                   /product="SSU ribosomal protein S6P"
FT                   /db_xref="GOA:B0BAQ7"
FT                   /db_xref="InterPro:IPR014717"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAQ7"
FT                   /protein_id="CAP06569.1"
FT                   /translation="MKKKTGQLYEGAYVFSVTLSEDARRKALEKVTSGITNYGGEVLKI
FT                   HDQGRKKLAYTIRGAREGYYYFIYFTVAPEAIAELWREYHLNEDLLRFMTLKASAVKEV
FT                   LEFATLPE"
FT   misc_feature    218505..218780
FT                   /note="HMMPfam hit to PF01250, Ribosomal protein S6, score
FT                   4.7e-17"
FT                   /inference="protein motif:HMMPfam:PF01250"
FT   CDS             218842..219087
FT                   /transl_table=11
FT                   /gene="rpsR"
FT                   /locus_tag="CTLon_0172"
FT                   /product="SSU ribosomal protein S18"
FT                   /db_xref="GOA:B0BAQ8"
FT                   /db_xref="InterPro:IPR018275"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAQ8"
FT                   /protein_id="CAP06570.1"
FT                   /translation="MNRPVHNEHRRKRFAKKCPFVSAGWKTIDYKDVTTLKRFITERGK
FT                   ILPRRITGVSSRFQALLAQAVKRARHVGLLPFVGED"
FT   misc_feature    218905..219066
FT                   /note="HMMPfam hit to PF01084, Ribosomal protein S18,score
FT                   2.1e-32"
FT                   /inference="protein motif:HMMPfam:PF01084"
FT   misc_feature    218923..218994
FT                   /note="PS00057 Ribosomal protein S18 signature."
FT                   /inference="protein motif:Prosite:PS00057"
FT   CDS             219108..219611
FT                   /transl_table=11
FT                   /gene="rplI"
FT                   /locus_tag="CTLon_0173"
FT                   /product="LSU ribosomal protein L9"
FT                   /db_xref="GOA:B0BAQ9"
FT                   /db_xref="InterPro:IPR020070"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAQ9"
FT                   /protein_id="CAP06571.1"
FT                   /translation="MKPQLLLLEDVDGLGRSGDLVVAKPGYVRNYLLPKGKAVVASAGT
FT                   LRLQAKLQEQRLLQAAADKEESLRLAEMLRSIVLDFQVRVDSENNMYGSVTVNDMISAA
FT                   EQQGVVLTRKNFPRSHSGIKNLGRHVVGLKLKEGVTADLHLEVRADHEIIEQKELQSAE
FT                   EQEG"
FT   misc_feature    219114..219257
FT                   /note="HMMPfam hit to PF01281, Ribosomal protein
FT                   L9,N-terminal domai, score 4.3e-15"
FT                   /inference="protein motif:HMMPfam:PF01281"
FT   CDS             219675..220541
FT                   /transl_table=11
FT                   /gene="ispE"
FT                   /locus_tag="CTLon_0174"
FT                   /product="4-diphosphocytidyl-2-C-methyl-D-erythritol
FT                   kinase"
FT                   /db_xref="GOA:B0BAR0"
FT                   /db_xref="InterPro:IPR014721"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAR0"
FT                   /protein_id="CAP06572.1"
FT                   /translation="MHFLSPAKLNLFLQILGRREDDFHEIVTRYQAIAFGDQLSLSISS
FT                   RDSLQVINACHLETPSNSIWKSVALFRRYTGITTPVSWRVVKQIPVGAGLAGGSSNAAT
FT                   ALFALNQIFKTGLSDEEMRSLAEQIGMDTPFFFSTGAALGVARGEKIIALEESVSDRYV
FT                   LYFSSEGVLTSRAFAVVQPSDCSSRKNLEYTQNDLEKPVFRLRLDLKEKKHWLESLWAE
FT                   LPVHIGLTGSGATLFVRYPEILEEDPSYAAQIQRAVTLSGGLLTSPIRRDPTAWYSIYS
FT                   ESALAAT"
FT   misc_feature    219918..220094
FT                   /note="HMMPfam hit to PF00288, GHMP kinases N terminal
FT                   domain, score 2.6e-14"
FT                   /inference="protein motif:HMMPfam:PF00288"
FT   misc_feature    220242..220469
FT                   /note="HMMPfam hit to PF08544, GHMP kinases C
FT                   terminal,score 3.3e-05"
FT                   /inference="protein motif:HMMPfam:PF08544"
FT   CDS             complement(220844..222196)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0175"
FT                   /product="putative integral membrane protein"
FT                   /db_xref="InterPro:IPR009978"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR1"
FT                   /protein_id="CAP06573.1"
FT                   /translation="MILPHYSSGLRIGSAILFFSAVIHTFLTPWLTRLYEESQHKKMIF
FT                   PERWRQYLWLSELLRIVSRVELVFVLWAIPLFCLFLYTEGYRITMAYFDSRNYVFSLFI
FT                   IAMLILLESRPIEYFSQRVFATIAKIGKQSPICWWWTIMIAAPLSAFFLKESGAMIIAA
FT                   TLLSKQFYKFSPSPKFCYATMGLLFSNISISGLTSSFSSRALLTILPEIKWTNSFIISH
FT                   FCWKVILAILVSTTIFFCLFRKEFKKFPKTIPSTTMMNDRLPSWIIFIHVVLVGCVILS
FT                   RAIPLFLGFLFIFYLGFQRFTIFYQHPIKTAKVCFVGLFYVGVVIFGELQEWWMLELMH
FT                   GMSDLGYMMTSYMFSIFLDNALVNHIVHNLPMANDCYLYLVLVGSMSAGGLTLVSNMPN
FT                   IVGYLILRPTFPHSDISLIKLFLSALLPSLVSLSIFWLFRAVPPFMFCLFR"
FT   misc_feature    complement(order(220883..220951,220994..221062,
FT                   221096..221164,221207..221266,221303..221398,
FT                   221471..221530,221591..221659,221738..221791,
FT                   221849..221905,221948..222016,222101..222169))
FT                   /note="11 probable transmembrane helices predicted for
FT                   CTL0174 by TMHMM2.0 at aa 10-32, 61-83,
FT                   98-116,136-153,180-202, 223-242, 267-298, 311-330,
FT                   345-367,379-401 and 416-438"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(220883..222196)
FT                   /note="HMMPfam hit to PF07399, Protein of unknown function
FT                   (DUF1504), score 0"
FT                   /inference="protein motif:HMMPfam:PF07399"
FT   CDS             complement(222375..225245)
FT                   /transl_table=11
FT                   /gene="ptr"
FT                   /locus_tag="CTLon_0176"
FT                   /product="exported insulinase/protease"
FT                   /db_xref="GOA:B0BAR2"
FT                   /db_xref="InterPro:IPR011765"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR2"
FT                   /protein_id="CAP06574.1"
FT                   /translation="MDNHLPVINDPTNDPKNMKRSLSLLLLCIPSFLTACSKSFQTIRD
FT                   ENPLTILTPALADQKIAKILCPNGLSLMIVSSPHAAESGAALVVKTGNNADPFEFPGLA
FT                   HFTEHCVFLGNEKYPEPSGFPAFLSTHGGIYNAFTYPDKTCFLFSVNNADLDNALDQFV
FT                   HLFIQPLFRQEDLNKEVHAVEQEFAMHPTKDSRRMHRIQQLIAPKNHPLKRFGCGNLST
FT                   LNSVTTQDMQTWFATHYSPENMAAIVYTTAPLDTAVPYIASLFSEIPISAQYTPQKPFP
FT                   KTQDTTALNKLFINKAVEPSPQLAIYWHFYDAPQSLQGWAQSLISILSSEKENSLVALL
FT                   KKEQLITEMEAELYSTSHNTQDFEILYKLTNKGEREYQRVLQLTFAFLDYVRHERLPAY
FT                   SLPEIQKINSLEYTYSTQTELFSTLSRMVPNFTSEPLATYPYRSLVYPEYSQEDEQTFA
FT                   TFLADPQQARYILSATLPSSWENADEFYDPIFDDTFYEKPLDFTPIQDSSSLGFAFPNP
FT                   NKFIPQTVQLLSQKKQHEGFAFSPQLTYDQNAITLYTCEDSFYTIPKIAMELRIRSPQI
FT                   QRTDVRSLVLRDLYSLLANETLIKRYDDALKAGMTFAVSPGATGVDLSLLGYTETSPVL
FT                   INALLSSLRDLPVEESLFLYYKDQLSEQYQKNLIACPIRAGLNKLYSQILVDTVSLEDK
FT                   LNTLNTLSYEEFANFTNKLLQELAVESLALGTLSAQDLSNLLSTLSNFAEASSPYAAPS
FT                   YYPQRKPLSSTKLSFQYPLSGNGMLLLEQNEDPHQYKDSVATSMLLSWIHNLYFSDLRT
FT                   EQQLGYMVGSKYLEFAETPCGLFYIRSNNYSPEELVHRTQLFIQKIATDPESAGLSEEI
FT                   FEQLRETYIQSILLPSSTPLAMAKKLFSIAFETKKQDFSRPDQKIAAARSMDYSYFKKY
FT                   CEEFLSQKFGPEIQLLVYGANSSQEK"
FT   misc_feature    complement(222609..223148)
FT                   /note="HMMPfam hit to PF05193, Peptidase M16 inactive
FT                   domain, score 1.2e-18"
FT                   /inference="protein motif:HMMPfam:PF05193"
FT   misc_feature    complement(224022..224573)
FT                   /note="HMMPfam hit to PF05193, Peptidase M16 inactive
FT                   domain, score 1.6e-25"
FT                   /inference="protein motif:HMMPfam:PF05193"
FT   misc_feature    complement(224622..225032)
FT                   /note="HMMPfam hit to PF00675, Insulinase (Peptidase family
FT                   M16), score 5.9e-26"
FT                   /inference="protein motif:HMMPfam:PF00675"
FT   misc_feature    complement(225138..225170)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   sig_peptide     complement(225141..225245)
FT                   /gene="ptr"
FT                   /locus_tag="CTLon_0176"
FT                   /note="Signal peptide predicted for CTL0175 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.660) with cleavage site
FT                   probability 0.520 between residues 35 and 36"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(225297..226298)
FT                   /transl_table=11
FT                   /gene="plsB"
FT                   /locus_tag="CTLon_0177"
FT                   /product="glycerol-3-phosphate acyltransferase"
FT                   /db_xref="GOA:B0BAR3"
FT                   /db_xref="InterPro:IPR016222"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR3"
FT                   /protein_id="CAP06575.1"
FT                   /translation="MHFSNCLYQAFEDQLLPEPLYQKFQICYQTYIEAASKKCSAEKAE
FT                   ALCSQWLKVIIDDLKNPIIFPPYHKKIRSPIDLYQFGIDFFSALIDDQKSQILHPERLD
FT                   QIQEYIQAGHNVVLLANHQTESDPQLMYCLLGASHPQLMESMIFVAGDRITSDPLARPF
FT                   SMGCDLLCIYSKRHINHPPELKEEKLMHNQKSMRTLKMLLSEGGKFFYVAPSGGRDRKN
FT                   LQGELYPAEFHPDSVEMFRLLAKSSGKTTHFFPLAMKTYDILPPPPTIEEAIGEHRVIS
FT                   FAPVAFNFGDELLLDELCSSEEADIYDKHALRALRASRAFSIVTDLYKEILT"
FT   misc_feature    complement(225522..226010)
FT                   /note="HMMPfam hit to PF01553, Acyltransferase, score
FT                   1.2e-38"
FT                   /inference="protein motif:HMMPfam:PF01553"
FT   CDS             complement(226311..227849)
FT                   /transl_table=11
FT                   /gene="cafE"
FT                   /locus_tag="CTLon_0178"
FT                   /product="ribonuclease E"
FT                   /db_xref="GOA:B0BAR4"
FT                   /db_xref="InterPro:IPR019307"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR4"
FT                   /protein_id="CAP06576.1"
FT                   /translation="MENDILLNIESKEIRYAHLKNGQLFDLIIERKKIRQLKGNIYRGR
FT                   VTNILRNIQSAFINIDERENGFIHISDVLENSKKFEQMFDIDSDADHAEPRPEETSEAP
FT                   IEELLKLDSPVLVQVVKEPIGTKGARLTSNISIPGRYLVLLPNSPHRGVSRKIEDPLMR
FT                   DQLKQLIRSFEMPQNMGLICRTASISASTETLINEAQDLLNTWQSILEKFYSPDHPSLL
FT                   YEETDILKKAVMTCVDKSYKRLLIDDYATYQKCKRLLGKYSPDTTVKIEYYRDSVPMFE
FT                   RFNIEKEIDRATKRKIWLSSGGYLFFDKTEAMHTIDVNSGRSTQLENGVEETLVQINLE
FT                   AAEEIARQLRLRNIGGLVIIDFIDMKSRKNQRRVLERLKEHMKYDAARCTILSMSEFGL
FT                   VEMTRQRNRESLMQTLFTTCPYCNGNAIIKTSESILIEIERDLKKIIKHKEHTNLCLVV
FT                   HPEIAHYMKQEQDDVELIRLAKQLKAKLQINTSDSIHLNHYQFFSLITGEGIEL"
FT   CDS             228413..228733
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0179"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR5"
FT                   /protein_id="CAP06577.1"
FT                   /translation="MCSPVEIRGSLEMVSGEQWFLSLEISTILSLRCRICDAPVEWPVQ
FT                   GIVIQQLIHCSDERSGVFDCRDLIRDELLLEGDRFQECQEGGCPAREFIKNFLKKRRDV
FT                   TL"
FT   CDS             228673..228999
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0180"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR6"
FT                   /protein_id="CAP06578.1"
FT                   /translation="MSCKRVYQKLFEKKAGRNSLEREKKPSTSQKPFSLIYFRVRREKN
FT                   RERVFLVSFSLRREGVSLVCRGIFWGVVPQNASLFESWGSPDFLIGEGSYLQSIGEVRN
FT                   GSTT"
FT   CDS             228983..229162
FT                   /transl_table=11
FT                   /gene="rpmF"
FT                   /locus_tag="CTLon_0181"
FT                   /product="LSU ribosomal protein L32"
FT                   /db_xref="GOA:B0BAR7"
FT                   /db_xref="InterPro:IPR006058"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR7"
FT                   /protein_id="CAP06579.1"
FT                   /translation="MAVPRNRHSNARKNIRRSHHAKKACSAAVCSNCKQAFIPHTVCAS
FT                   CGFYKGKAVITVEK"
FT   misc_feature    228986..229153
FT                   /note="HMMPfam hit to PF01783, Ribosomal L32p protein
FT                   family, score 2.4e-23"
FT                   /inference="protein motif:HMMPfam:PF01783"
FT   misc_feature    229055..229081
FT                   /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:Prosite:PS00197"
FT   CDS             229184..230149
FT                   /transl_table=11
FT                   /gene="plsX"
FT                   /locus_tag="CTLon_0182"
FT                   /product="Fatty acid/phospholipid synthase"
FT                   /db_xref="GOA:B0BAR8"
FT                   /db_xref="InterPro:IPR012281"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAR8"
FT                   /protein_id="CAP06580.1"
FT                   /translation="MKVRLGVDMMGGDHDPLVVWEALGEVLLSSTGEQPVEFTVFATSD
FT                   VHHQLMNSPLSRSVRIVTAEDFVSMEDSLLAAVRKKRSSMALGLDALQQGDLDGFVSSG
FT                   NTAALVTLARSKIPMIPAVPRPALLVSVPTLSGFAVILDVGATVSVNPDEMVGFARMGL
FT                   AYRQSLSSNSNQPFTLGLLNIGSEERKGTDSHKQTFRMLRNIFGSAFLGNIESGDVFSG
FT                   KVDIVVTDGFTGNVFLKTAEGLFDFLRHILGDRLEKSIKMQFDYTIYPGSIISGLSRLV
FT                   IKCHGKSHGTALFGGISGAIDLARANVCSRIADRFGDNVV"
FT   misc_feature    229190..230116
FT                   /note="HMMPfam hit to PF02504, Fatty acid synthesis
FT                   protein, score 8.7e-176"
FT                   /inference="protein motif:HMMPfam:PF02504"
FT   CDS             230369..234961
FT                   /transl_table=11
FT                   /gene="pmpD"
FT                   /locus_tag="CTLon_0183"
FT                   /product="polymorphic outer membrane protein"
FT                   /db_xref="GOA:B0BAR9"
FT                   /db_xref="InterPro:IPR011427"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAR9"
FT                   /protein_id="CAP06581.1"
FT                   /translation="MSSEKDIKSTCSKFSLSVVAAILASVSGLASCVDLHAGGQSVNEL
FT                   VYVGPQAVLLLDQIRDLFVGSKDSQAEGQYRLIVGDPSSFQEKDADTLPGKVEQSTLFS
FT                   VTNPVVFQGVDQQDQVSSQGLICSFTSSNLDSPRDGESFLGIAFVGDSSKAGITLTDVK
FT                   ASLSGAALYSTEDLIFEKIKGGLEFASCSSLEQGGACAAQSILIHDCQGLQVKHCTTAV
FT                   NAEGSSANDHLGFGGGAFFVTGSLSGEKSLYMPAGDMVVANCDGAISFEGNSANFANGG
FT                   AIAASGKVLFVANDKKTSFIENRALSGGAIAASSDIAFQNCAELVFKGNCAIGTEDKGS
FT                   LGGGAISSLGTVLLQGNHGITCDKNESASQGGAIFGKNCQISDNEGPVVFRDSTACLGG
FT                   GAIAAQEIVSIQNNQAGISFEGGKASFGGGIACGSFSSAGGASVLGTIDISKNLGAISF
FT                   SRTLCTTSDLGQMEYQGGGALFGENISLSENAGVLTFKDNIVKTFASNGKILGGGAILA
FT                   TGKVEITNNSGGISFTGNARAPQALPTQEEFPLFSKKEGRPLSSGYSGGGAILGREVAI
FT                   LHNAAVVFEQNRLQCSEEEATLLGCCGGGAVHGMDSTSIVGNSSVRFGNNYAMGQGVSG
FT                   GALLSKTVQLAGNGSVDFSRNIASLGGGALQASEGNCELVDNGYVLFRDNRGRVYGGAI
FT                   SCLRGDVVISGNKGRVEFKDNIATRLYVEETVEKVEEVEPAPEQKDNNELSFLGSVEQS
FT                   FITAANQALFASEDGDLSPESSISSEELAKRRECAGGAIFAKRVRIVDNQEAVVFSNNF
FT                   SDIYGGAIFTGSLREEDKLDGQIPEVLISGNAGDVVFSGNSSKRDEHLPHTGGGAICTQ
FT                   NLTISQNTGNVLFYNNVACSGGAVRIEDHGNVLLEAFGGDIVFKGNSSFRAQGSDAIYF
FT                   AGKESHITALNATEGHAIVFHDALVFENLKERKSAEVLLINSRENPGYTGSIRFLEAES
FT                   KVPQCIHVQQGSLELLNGATLCSYGFKQDAGAKLVLAAGSKLKILDSGTPVQGHAISKP
FT                   EAEIESSSEPEGAHSLWIAKNAQTTVPMVDIHTISVDLASFSSSQQEGTVEAPQVIVPG
FT                   GSYVRSGELNLELVNTTGTGYENHALLKNEAKVPLMSFVASSDEASAEISNLSVSDLQI
FT                   HVATPEIEEDTYGHMGDWSEAKIQDGTLVINWNPTGYRLDPQKAGALVFNALWEEGAVL
FT                   SALKNARFAHNLTAQRMEFDYSTNVWGFAFGGFRTLSAENLVAIDGYKGAYGGASAGVD
FT                   IQLMEDFVLGVSGAAFLGKMDSQKFDAEVSRKGVVGSVYTGFLAGSWFFKGQYSLGETQ
FT                   NDMKTRYGVLGESSASWTSRGVLADALVEYRSLVGPVRPTFYALHFNPYVEVSYASMKF
FT                   PGFTEQGREARSFEDASLTNITIPLGMKFELAFIKGQFSEVNSLGISYAWEAYRKVEGG
FT                   AVQLLEAGFDWEGAPMDLPRQELRVALENNTEWSSYFSTVLGLTAFCGGFTSTDSKLGY
FT                   EANAGLRLIF"
FT   misc_feature    230369..230431
FT                   /note="PS00430 TonB-dependent receptor proteins signature
FT                   1."
FT                   /inference="protein motif:Prosite:PS00430"
FT   sig_peptide     230369..230479
FT                   /gene="pmpD"
FT                   /locus_tag="CTLon_0183"
FT                   /note="Signal peptide predicted for CTL0183 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.975) with cleavage site
FT                   probability 0.690 between residues 37 and 38"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    230432..230464
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   misc_feature    230894..230977
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 8.5"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231167..231226
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 12"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231257..231310
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 1.9"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231338..231415
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 5.7"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231443..231499
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.08"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231500..231583
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 6.2"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231587..231667
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 33"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231704..231814
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 11"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231842..231922
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 4.2"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    231926..232084
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 2"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    232226..232291
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 5.7"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    232316..232372
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.79"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    232403..232459
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 9.8"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    232781..232837
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.2"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    232904..232981
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.0034"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    233009..233062
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 2.8"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    233366..233968
FT                   /note="HMMPfam hit to PF07548, Chlamydia polymorphic
FT                   membrane protei, score 1.2e-55"
FT                   /inference="protein motif:HMMPfam:PF07548"
FT   misc_feature    234098..234919
FT                   /note="HMMPfam hit to PF03797, Autotransporter
FT                   beta-domain,score 1.2e-39"
FT                   /inference="protein motif:HMMPfam:PF03797"
FT   CDS             235162..235956
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0184"
FT                   /product="candidate inclusion membrane protein"
FT                   /note="carries characteristic twin membrane spanning
FT                   domains"
FT                   /db_xref="InterPro:IPR007285"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS0"
FT                   /protein_id="CAP06582.1"
FT                   /translation="MTTLPNTCTSNSNSINTFTKDIEMAKQIQGSRKDPLAKTSWIAGL
FT                   ICVVAGVLGLLAIGIGGCSMASGLGLIGAIIAAVVVAVGLCCLVSALCLQVEKSQWWQK
FT                   EFKSWIEQKSQFRIVMADMLEANQKLQSEVEFLSKGWSDAAAVHKEDVTKYEQVVEKYG
FT                   EKIMKLYKQTGVLTIEKVNLQKEKKTWLEEKAEMEQKLTTVTDLEAAKQQLEEKVTDLE
FT                   SEKQELREELDKATENLDEMAHEAMEFEKEKHGIKPGRRGSI"
FT   misc_feature    235165..235845
FT                   /note="HMMPfam hit to PF04156, IncA protein, score 5.2e-43"
FT                   /inference="protein motif:HMMPfam:PF04156"
FT   misc_feature    order(235279..235347,235375..235443)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CTL0184 by TMHMM2.0 at aa 40-62 and 72-94"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(236040..236339)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0185"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS1"
FT                   /protein_id="CAP06583.1"
FT                   /translation="MFRSQKPKKNKCCLWLRGVLFGGFLATLLTSLFLPKSGMQIRKKL
FT                   LRVKTSGTKKGRALLKNSKHHTREFAEQTKLLAKNISKEIQDFTQSIIDESRRD"
FT   misc_feature    complement(236235..236303)
FT                   /note="1 probable transmembrane helix predicted for CTL0185
FT                   by TMHMM2.0 at aa 47-69"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(236360..236722)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0186"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS2"
FT                   /protein_id="CAP06584.1"
FT                   /translation="MTPYLIEALVACCILLSLGMVLIFAFTICLLLKLHKIMKLVSRIS
FT                   SLFNFEARWLAPLLIGKKFILNWLRKKYADRKMSQLADELEDNEDSENSCSSRLLCGAK
FT                   LAAIALCAWLLIRKKD"
FT   misc_feature    complement(236627..236695)
FT                   /note="1 probable transmembrane helix predicted for CTL0186
FT                   by TMHMM2.0 at aa 10-32"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             236967..238343
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0187"
FT                   /product="phosphoglucosamine mutase"
FT                   /db_xref="GOA:B0BAS3"
FT                   /db_xref="InterPro:IPR006352"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAS3"
FT                   /protein_id="CAP06585.1"
FT                   /translation="MTRDVSQLFGTDGVRGRANFEPMTVETSVLLGKAIAGVLLEKHAG
FT                   KHRVVVGKDTRLSGYMFENALIAGLTSMGIETLMLGPIPTPGVAFITRAYRADAGIMIS
FT                   ASHNPYRDNGIKIFSSDGFKIGQAVEERIEAMVASKDFGKLPDDHAVGKNKRVKDATGR
FT                   YIEYAKATFPKGRTLKGLRIVLDCAHGATYRVAPSVFEELDAEVICYGCEPSGCNINAG
FT                   CGALWPSTIQKAVIEHKADVGIALDGDGDRLIMVDEKGHIVDGDMLLSICASDLKRRQA
FT                   LPDNRVVATVMTNFGVLRYLESLGIQVTISPVGDRHVLQHMLENQAVLGGEQSGHMIFL
FT                   DYNTTGDGIVSALQVLRIMIESESTLSDLTACIVKSPQALINVPVTKKVPLESLANVQG
FT                   VLKEVKEVLGDSGRILLRYSGTENICRVMVEGTKKHQVDSLAKTIVDVVEAEIGAGISE
FT                   "
FT   misc_feature    236982..237398
FT                   /note="HMMPfam hit to
FT                   PF02878,Phosphoglucomutase/phosphomannomutase, al, score
FT                   2.9e-63"
FT                   /inference="protein motif:HMMPfam:PF02878"
FT   misc_feature    237264..237308
FT                   /note="PS00710 Phosphoglucomutase and phosphomannomutase
FT                   phosphoserine signature."
FT                   /inference="protein motif:Prosite:PS00710"
FT   misc_feature    237450..237752
FT                   /note="HMMPfam hit to
FT                   PF02879,Phosphoglucomutase/phosphomannomutase, al, score
FT                   8.1e-35"
FT                   /inference="protein motif:HMMPfam:PF02879"
FT   misc_feature    237756..238094
FT                   /note="HMMPfam hit to
FT                   PF02880,Phosphoglucomutase/phosphomannomutase, al, score
FT                   1.3e-24"
FT                   /inference="protein motif:HMMPfam:PF02880"
FT   misc_feature    238104..238316
FT                   /note="HMMPfam hit to
FT                   PF00408,Phosphoglucomutase/phosphomannomutase, C-, score
FT                   8.3e-05"
FT                   /inference="protein motif:HMMPfam:PF00408"
FT   CDS             238354..240174
FT                   /transl_table=11
FT                   /gene="glmS"
FT                   /locus_tag="CTLon_0188"
FT                   /product="glucosamine--fructose-6-phosphate
FT                   aminotransferase"
FT                   /db_xref="GOA:B0BAS4"
FT                   /db_xref="InterPro:IPR017932"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS4"
FT                   /protein_id="CAP06586.1"
FT                   /translation="MCGIFGYLGEKNAVPLVLEGLSELEYRGYDSAGIATLIEGRLFVE
FT                   KAVGPVSQLCSAVSSDIHSQAAIGHTRWATHGEPSRFNAHPHVDMDASCALVHNGIIEN
FT                   FQKLKEELEEQGVVFSSDTDTEVIVQLFARRYKETRDLIQSFSWTLKRLQGSFACALMH
FT                   QDHPEVLLCAAHESPLILGLGEDEVFISSDIHAFLKYSGCTQTLASGELAVLRIGKSIE
FT                   TYNFELARIQKEVRCIDHTEDSLDKKGFDYYMLKEIYEQPEVFERILHLTCEENSFTES
FT                   FLKGFSLDEIQSLHIVACGSSYHAGYLAKYVIESIASIPVYVEIASEFRYRQPYIAEHS
FT                   LAILISQSGETADTLAALNEFRKLSKARVLGICNVRESALASRVDHCLFIEAGLEVGVA
FT                   STKAFTAQLLLLILLGLRLANHRQVIAQEDLAQAIQGLKDLPNLTRLFLDSSIHDWRCR
FT                   QIEETSFIFLGRRFMYPICMEAALKLKEIAYVEANAYPAGEMKHGPIALIREGTPVIVY
FT                   CGDRSVYTKTIGAIMEVKARKAYVIALAPESNRDIAAVSDEQIYIPDSHDLAAPILFTI
FT                   AGQIMAYTMALQRGTEVDRPRNLAKSVTVE"
FT   misc_feature    238357..238935
FT                   /note="HMMPfam hit to PF00310, Glutamine amidotransferases
FT                   class-II, score 2.1e-33"
FT                   /inference="protein motif:HMMPfam:PF00310"
FT   misc_feature    238972..239016
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:Prosite:PS00211"
FT   misc_feature    238990..239013
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    239206..239613
FT                   /note="HMMPfam hit to PF01380, SIS domain, score 2.7e-30"
FT                   /inference="protein motif:HMMPfam:PF01380"
FT   misc_feature    239722..240129
FT                   /note="HMMPfam hit to PF01380, SIS domain, score 1.1e-14"
FT                   /inference="protein motif:HMMPfam:PF01380"
FT   CDS             240277..241473
FT                   /transl_table=11
FT                   /gene="tyrP"
FT                   /locus_tag="CTLon_0189"
FT                   /product="tyrosine-specific transport protein"
FT                   /db_xref="GOA:B0BAS5"
FT                   /db_xref="InterPro:IPR018227"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS5"
FT                   /protein_id="CAP06587.1"
FT                   /translation="MINKMLGGALLVAGTTIGAGVLAVPVSTSEGGFLPTTLLYIVSWF
FT                   IAVASGYCFLEVLTWTHSRKNVNMVSMAEYTLGHKSKIIMWLVYLLLFYSLLVAYFCDG
FT                   GNILMRVMGCRSWDTPWIRHAMPVVFFALFSPLLMAKTSIIDQCNRVFVFGLGIAFAMF
FT                   CYFGFPLMKTDLLVRSAWGATLKGFPILFLAFGFQNVVPTLYHYMDKNVKDVKKAIVIG
FT                   SSIPLVLYIIWEAIVLGAVPISFLEQAKVEGWTAIGALQTALKCAAFYVAGEFFGFFAL
FT                   ISSFIGVSLGLKDFFIDAFQWDEKKRKVEIFFLVFVFPLVWAVFYPGIVLKCLECTGAL
FT                   GETIVLGVCPVLMVWKGRYGKKRYYGKRILPGGKGTLLVMSGLVLLNLVLIAQKFLGY"
FT   sig_peptide     240277..240345
FT                   /gene="tyrP"
FT                   /locus_tag="CTLon_0189"
FT                   /note="Signal peptide predicted for CTL0189 by SignalP 2.0
FT                   HMM (Signal peptide probability 1.000) with cleavage site
FT                   probability 0.928 between residues 23 and 24"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    240277..241446
FT                   /note="HMMPfam hit to PF03222, Tryptophan/tyrosine permease
FT                   family, score 5.6e-219"
FT                   /inference="protein motif:HMMPfam:PF03222"
FT   misc_feature    order(240295..240363,240391..240459,240520..240579,
FT                   240637..240690,240727..240786,240829..240897,
FT                   240931..240999,241078..241146,241207..241266,
FT                   241294..241347,241384..241452)
FT                   /note="11 probable transmembrane helices predicted for
FT                   CTL0189 by TMHMM2.0 at aa 7-29, 39-61,
FT                   82-101,121-138,151-170, 185-207, 219-241, 268-290,
FT                   311-330,340-357 and 370-392"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             241656..242849
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0190"
FT                   /product="tyrosine-specific transport protein"
FT                   /db_xref="GOA:B0BAS6"
FT                   /db_xref="InterPro:IPR018227"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS6"
FT                   /protein_id="CAP06588.1"
FT                   /translation="MCMRNKCVGGILIVAGTVIGAGVLAVPILTAVEGFFPAVVLYVLA
FT                   WLVSLASGYGYLEVLTWCKGNRQANLCSMAEETLGRVGRIVLCLVYLFLFYSLLVAYFC
FT                   DGGNILSRVIGESFFSYPWMRHVMPLLFFSLFAPLLMANTSVIDYCNRGFVFGLIFVFG
FT                   LFCVLGVPRIQGELLLRASWFSSLNSLPIFFLAFGFQNVVPSLYHYLDGNIREVKRAIL
FT                   IGSLIPLILYIAWEALVLGTVPLVDLLKAKDLGWTAAGALQGSLKNSAFYIAGELFGFF
FT                   ALVTSFIGTALALKDFYIDIFKWDARKKRVSLFFLVQVFPLVWAIFYPEIVLSCLRYAG
FT                   GIGGACIVVLFPVAMLWNGRYGKRRCFGKRILPGGKTVLLILTGYTVLNLATLYYAF"
FT   sig_peptide     241656..241730
FT                   /locus_tag="CTLon_0190"
FT                   /note="Signal peptide predicted for CTL0190 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.983) with cleavage site
FT                   probability 0.885 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    241662..242831
FT                   /note="HMMPfam hit to PF03222, Tryptophan/tyrosine permease
FT                   family, score 4.1e-210"
FT                   /inference="protein motif:HMMPfam:PF03222"
FT   misc_feature    order(241674..241742,241770..241838,241899..241967,
FT                   242025..242093,242112..242180,242223..242282,
FT                   242316..242384,242469..242537,242586..242639,
FT                   242667..242726,242787..242843)
FT                   /note="11 probable transmembrane helices predicted for
FT                   CTL0190 by TMHMM2.0 at aa 7-29, 39-61,
FT                   82-104,124-146,153-175, 190-209, 221-243, 272-294,
FT                   311-328,338-357 and 378-396"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    241956..241984
FT                   /note="motif repeated in this and the adjacent CDS gene
FT                   product"
FT   misc_feature    242463..242503
FT                   /note="motif repeated in this and the adjacent CDS gene
FT                   product"
FT   CDS             242891..243607
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0191"
FT                   /product="putative membrane transport protein"
FT                   /db_xref="GOA:B0BAS7"
FT                   /db_xref="InterPro:IPR006214"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS7"
FT                   /protein_id="CAP06589.1"
FT                   /translation="MGLYDRDYAQDSRLPGTFSSRVYGWMTAGLAVTALTSLGLYATGA
FT                   YRALFPMWWIWCFATLGVSFYIQAQIQKLSVPAVMGLFLAYSILEGMFFGTLVPVYAAQ
FT                   FGGGVVWAAFGSAGIIFGLSAAYGAFTKNDLTQIHRILMLALVGLVVISLAFLIVSLFT
FT                   PMPLLYLLICYLGLIIFVGLTVVDAQSIRRVARSVGDHGDLSYKLSLIMALQMYCNVIM
FT                   IFWYLLQIFASSDKRR"
FT   misc_feature    242921..243595
FT                   /note="HMMPfam hit to PF01027, Uncharacterised protein
FT                   family UPF0005, score 2.4e-06"
FT                   /inference="protein motif:HMMPfam:PF01027"
FT   misc_feature    order(242951..243019,243032..243091,243110..243178,
FT                   243206..243274,243311..243379,243389..243448,
FT                   243506..243574)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CTL0191 by TMHMM2.0 at aa 21-43, 48-67,
FT                   74-96,106-128,141-163, 167-186 and 206-228"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(243704..244558)
FT                   /transl_table=11
FT                   /gene="ftsY"
FT                   /locus_tag="CTLon_0192"
FT                   /product="Cell Division Protein"
FT                   /db_xref="GOA:B0BAS8"
FT                   /db_xref="InterPro:IPR004390"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAS8"
FT                   /protein_id="CAP06590.1"
FT                   /translation="MFKFFGNKLRSLFKRTLSSDLLEYAEVLLYEGDFGPKLTEAFCEE
FT                   LRRCKNPDERAVKELIRSFLSKIISKLPQREPLSVRPFSTLVLGTNGSGKTTTVAKLAH
FT                   YYLSQNQKVLIVATDTFRSAGMDQMRCWAETLNCGFISGKPGGDAAAIAFDGISAAVAR
FT                   DYDHVIIDTSGRLHTHTNLLKELQKIATVCNKAFPGAPHETLMTIDATLGSNTLSQVQL
FT                   FHEAVPINGLIFTKVEGSAKGGSLFRIADELKIPTRFVGYGETIHDFEPFAIDRFLDKL
FT                   LDV"
FT   misc_feature    complement(243710..244318)
FT                   /note="HMMPfam hit to PF00448, SRP54-type protein, GTPase
FT                   domain, score 1.2e-109"
FT                   /inference="protein motif:HMMPfam:PF00448"
FT   misc_feature    complement(244271..244294)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             244628..245788
FT                   /transl_table=11
FT                   /gene="sucC"
FT                   /locus_tag="CTLon_0193"
FT                   /product="succinyl-CoA synthetase beta chain"
FT                   /db_xref="GOA:B0BAS9"
FT                   /db_xref="InterPro:IPR016102"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAS9"
FT                   /protein_id="CAP06591.1"
FT                   /translation="MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVEAAIQAEQWKAGVV
FT                   KAQVHAGGRGKNGGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPVNKVLISPLVEI
FT                   ASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRI
FT                   AKFMEWDQPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNA
FT                   LYRHPELADCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGG
FT                   SAANFLDVGGSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQK
FT                   ETIPTVIRLEGTNVDKGKGMIINAGIPCEFVTSMSEGAELAVQLSR"
FT   misc_feature    244631..245236
FT                   /note="HMMPfam hit to PF08442, ATP-grasp domain, score
FT                   1.9e-82"
FT                   /inference="protein motif:HMMPfam:PF08442"
FT   misc_feature    244649..245032
FT                   /note="HMMPfam hit to PF01071, Phosphoribosylglycinamide
FT                   synthetase, ATP, score 0.0025"
FT                   /inference="protein motif:HMMPfam:PF01071"
FT   misc_feature    245363..245773
FT                   /note="HMMPfam hit to PF00549, CoA-ligase, score 5.2e-41"
FT                   /inference="protein motif:HMMPfam:PF00549"
FT   misc_feature    order(245369..245437,245564..245632)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CTL0193 by TMHMM2.0 at aa 248-270 and 313-335"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    245396..245470
FT                   /note="PS01217 ATP-citrate lyase / succinyl-CoA ligases
FT                   family signature 3."
FT                   /inference="protein motif:Prosite:PS01217"
FT   CDS             245803..246678
FT                   /transl_table=11
FT                   /gene="sucD"
FT                   /locus_tag="CTLon_0194"
FT                   /product="succinyl-CoA synthetase alpha chain"
FT                   /db_xref="GOA:B0BAT0"
FT                   /db_xref="InterPro:IPR017440"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT0"
FT                   /protein_id="CAP06592.1"
FT                   /translation="MLELLSKDLPIITQGITGKAGSFHTTQCVAYGSNFVGGVTPGKGG
FT                   SQFLDLPIFDSVLEAKQATGCRASMIFVPPPFAAEAIFEAEDAGIELIVCITEGIPIKD
FT                   MLEVASLMEKSASSLIGPNCPGVIKPGVCKIGIMPGYIHLPGKVGVVSRSGTLTYEAVW
FT                   QLTQRKIGQSVCIGIGGDPLNGTSFIDALQEFEKDSQTEAVLMIGEIGGSAEEEAADWI
FT                   RQHSSKPVIAFIAGATAPKGKRMGHAGAIISGKSGDAFSKQEALRQAGVTVVESPALIG
FT                   EAVASVLKPR"
FT   misc_feature    245812..246102
FT                   /note="HMMPfam hit to PF02629, CoA binding domain, score
FT                   9.2e-44"
FT                   /inference="protein motif:HMMPfam:PF02629"
FT   misc_feature    246199..246624
FT                   /note="HMMPfam hit to PF00549, CoA-ligase, score 2.4e-57"
FT                   /inference="protein motif:HMMPfam:PF00549"
FT   misc_feature    246256..246345
FT                   /note="PS01216 ATP-citrate lyase / succinyl-CoA ligases
FT                   family signature 1."
FT                   /inference="protein motif:Prosite:PS01216"
FT   misc_feature    246508..246549
FT                   /note="PS00399 ATP-citrate lyase / succinyl-CoA ligases
FT                   family active site."
FT                   /inference="protein motif:Prosite:PS00399"
FT   misc_feature    246547..246570
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   CDS             246818..248311
FT                   /transl_table=11
FT                   /gene="htrA"
FT                   /locus_tag="CTLon_0195"
FT                   /product="serine protease"
FT                   /db_xref="GOA:B0BAT1"
FT                   /db_xref="InterPro:IPR011782"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT1"
FT                   /protein_id="CAP06593.1"
FT                   /translation="MMKRLLCVLLSTSVFSSPMLGYSASKKDSKADICLAVSSGDQEVS
FT                   QEDLLKEVSRGFSRVAAKATPGVVYIENFPKTGNQAIASPGNKRGFQENPFDYFNDEFF
FT                   NRFFGLPSYREQQRPQQRDAVRGTGFIVSEDGYVVTNHHVVEDAGKIHVTLHDGQKYTA
FT                   KIVGLDPKTDLAVIKIQAEKLPFLTFGNSDQLQIGDWAIAIGNPFGLQATVTVGVVSAK
FT                   GRNQLHIVDFEDFIQTDAAINPGNSGGPLLNINGQVIGVNTAIVSGSGGYIGIGFAIPS
FT                   LMAKRVIDQLISDGQVTRGFLGVTLQPIDSELATCYKLEKVYGALVTDVVKGSPAEKAG
FT                   LRQEDVIVAYNGKEVESLSALRNAISLMMPGTRVILKIVREGKTIEIPVTVTQIPTEDG
FT                   VSALQKMGVRVQNITPEICKKLGLAADTRGILVVAVEAGSPAASAGVAPGQLILAVNRQ
FT                   RVASVEELNQVLKNSKGENVLLMVSQGDVVRFIVLKSDE"
FT   sig_peptide     246818..246865
FT                   /gene="htrA"
FT                   /locus_tag="CTLon_0195"
FT                   /note="Signal peptide predicted for CTL0195 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.999) with cleavage site
FT                   probability 0.485 between residues 16 and 17"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    247133..247681
FT                   /note="HMMPfam hit to PF00089, Trypsin, score 2e-18"
FT                   /inference="protein motif:HMMPfam:PF00089"
FT   misc_feature    247685..247954
FT                   /note="HMMPfam hit to PF00595, PDZ domain (Also known as
FT                   DHR or GLGF), score 1.5e-12"
FT                   /inference="protein motif:HMMPfam:PF00595"
FT   misc_feature    248045..248266
FT                   /note="HMMPfam hit to PF00595, PDZ domain (Also known as
FT                   DHR or GLGF), score 0.0014"
FT                   /inference="protein motif:HMMPfam:PF00595"
FT   CDS             248513..251437
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0196"
FT                   /product="metalloprotease-insulinase"
FT                   /db_xref="GOA:B0BAT2"
FT                   /db_xref="InterPro:IPR013578"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT2"
FT                   /protein_id="CAP06594.1"
FT                   /translation="MKTGDTYRNFVVKLSQDLPEIESKLIEVEHTPTGATIMMIVNDDD
FT                   ENVFNISFRTCPQDSSGVAHVLEHMALCGSESYPIRDPFFSMTRRSLNTFMNAFTGADF
FT                   TCYPAASQIPEDFYNLLSVYIDAVFHPLLTENSFLQEAWRYERTEEGNLSYTGIVFNEM
FT                   KGALMSGESRLSEAMNAALFPSVTYGVNSGGDPKAIVSLNLETVRAFYESQYTLSRCLF
FT                   YFYGNIKPSRHLDFLEEKLLRRVGKVEKQSVTLPLQKRFKEPVRVIERYPSDGADEDKV
FT                   LFGLAWLTCSIFDQQDLLALHVLDLVLMGTDAAPLKSRLLKSGLCKQVDMSIDSELHEI
FT                   PVYIVCKGCSHSGSQKLESLILASLEEILQEGIPMHLVEGAVHQLELARKEIAGYSIPY
FT                   GLSLFFRAGLLRQHGGKAEDGLRIHTLFANLRENIQKPDYLPRLVRKYFLDNPHYARVI
FT                   FLPDSQLIAQENKEERNVLHTIQMQMSEEELERVEAVSKRLEAYQSQEEDLNKVLPLFA
FT                   LDKVPSLGKEFVLEKEVFAEGEVLHHDCFTNDIIFVELVFDLPALSAEELPWLRLLVFV
FT                   LLQLGSGNRSYKEHLEFLLEHTGGVDVLYEFSSQATDTDRLSPSISIRGKALISKAEYL
FT                   FQVIRETLTTVDFSDIARLKELLMQHAESLTNSVRNSPMGYAVSLACCNKSIAGGLAYQ
FT                   MAGLPYVKYIRELLSNFDSQAQEIIDRLQTLYKKCFVGRRQLVISSSKANYQVLHDQRF
FT                   FGLLDERLEGGELWKNPVLDVVKDSRGIVIPARGAYNVLAFPLGSLAYDHPDAAVLSVA
FT                   AEVLGNVILHAKIREQGGAYGSGASANLGRGAFYCYSYRDPEVATTYQVLLQGIRDMAA
FT                   GDFSEEDVHEGILGVIQNLDDPISPGSRGSASYYRSRSGKVPFVRQAFRQAVLSTTKAQ
FT                   ICEVVRNRLEGCLSEASFVSFAGEEMLQKSAKELNEAFQIEAAF"
FT   misc_feature    248624..249055
FT                   /note="HMMPfam hit to PF00675, Insulinase (Peptidase family
FT                   M16), score 0.019"
FT                   /inference="protein motif:HMMPfam:PF00675"
FT   misc_feature    249113..249667
FT                   /note="HMMPfam hit to PF05193, Peptidase M16 inactive
FT                   domain, score 1e-27"
FT                   /inference="protein motif:HMMPfam:PF05193"
FT   misc_feature    249887..250633
FT                   /note="HMMPfam hit to PF08367, Peptidase M16C
FT                   associated,score 4e-118"
FT                   /inference="protein motif:HMMPfam:PF08367"
FT   misc_feature    250661..251170
FT                   /note="HMMPfam hit to PF05193, Peptidase M16 inactive
FT                   domain, score 2.1e-24"
FT                   /inference="protein motif:HMMPfam:PF05193"
FT   CDS             complement(251451..252734)
FT                   /transl_table=11
FT                   /gene="rmuC"
FT                   /locus_tag="CTLon_0197"
FT                   /product="DNA recombination protein"
FT                   /db_xref="InterPro:IPR003798"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT3"
FT                   /protein_id="CAP06595.1"
FT                   /translation="MGVFAISLLSQTVCLYFTFFSLGIALGVLFSFKIFTKKLSRQYEI
FT                   IRDLEHSKAILQMSLDTRRSQEQIMEEFSHKLTSVSQAFARDMKTESQEFFSEKTQAIT
FT                   SVLAPVHNTLSAFKQNLENFETKQAEDRGALKEQLSQLLTAEQKLERETQALTNILKHP
FT                   GSRGRWGEIQLERILEISGMLKYCDYSTQTVDSSESSSRADIVIRLPQNRSLVIDAKTP
FT                   FSEEYLTDNHADPTDLVKKIKDHIKTLKTKSYWDKFEQSPEFVILFLPGESLFNDAIRC
FT                   APELMDYAGQSNVILSSPVTLMALLKTVTHVWKQENLQNQIREIGQLGKDLYQRMHKLF
FT                   DHFHKVGKHLGQAVHSYNDMSSSLSARVLPILRTFDKLELSSSHNKIEALSQVSTLPHS
FT                   PKVPCPENDLAECLSPEASYLKPPSSNQ"
FT   misc_feature    complement(251559..252437)
FT                   /note="HMMPfam hit to PF02646, RmuC family, score 6.2e-140"
FT                   /inference="protein motif:HMMPfam:PF02646"
FT   misc_feature    complement(252630..252698)
FT                   /note="1 probable transmembrane helix predicted for CTL0197
FT                   by TMHMM2.0 at aa 13-35"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(252738..253529)
FT                   /transl_table=11
FT                   /gene="pssA"
FT                   /locus_tag="CTLon_0198"
FT                   /product="CDP-diacylglycerol--serine
FT                   O-phosphatidyltransferase"
FT                   /db_xref="GOA:B0BAT4"
FT                   /db_xref="InterPro:IPR000462"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT4"
FT                   /protein_id="CAP06596.1"
FT                   /translation="MNRIEIDLRGKRRVVTPNAITAFGLCCGLFIIFKSVLKTSSSLEL
FT                   MHRLQGLSLLLISAMIADFSDGAVARIMKAESAFGAHFDSLSDAITFGIAPPLIAIKSL
FT                   NGEYGGTFCSSFLLVTCIIYSLCGVLRLVRYNLFAATGEKATTFTGLPIPAAAACVVSL
FT                   GVLLASDTLNSLPERARVLLVSLGLLLSGCLMISTWRFPGLKHFHFRVSSSLLVLGIGL
FT                   VACLFFSGLVDHFTQVFFLVSWLYVLVVAPVFSFINKRSSS"
FT   misc_feature    complement(order(252759..252827,252840..252899,
FT                   252918..252986,253029..253097,253131..253199,
FT                   253227..253295,253419..253487))
FT                   /note="7 probable transmembrane helices predicted for
FT                   CTL0198 by TMHMM2.0 at aa 15-37, 79-101,
FT                   111-133,145-167,182-204, 211-230 and 235-257"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(252780..253373)
FT                   /note="HMMPfam hit to PF01066, CDP-alcohol
FT                   phosphatidyltransferase, score 4.7e-22"
FT                   /inference="protein motif:HMMPfam:PF01066"
FT   misc_feature    complement(253266..253334)
FT                   /note="PS00379 CDP-alcohol phosphatidyltransferases
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00379"
FT   CDS             254164..257307
FT                   /transl_table=11
FT                   /gene="nrdA"
FT                   /locus_tag="CTLon_0199"
FT                   /product="ribonucleoside-diphosphate reductase alpha chain"
FT                   /db_xref="GOA:B0BAT5"
FT                   /db_xref="InterPro:IPR013509"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT5"
FT                   /protein_id="CAP06597.1"
FT                   /translation="MVDLQEKQCTIVKRNGMFVPFDRNRIFQALEAAFRDTRRIDDHMP
FT                   LPEDLESSIRSITHQVVKEVVQKITDGQVVTVERIQDMVESQLYVNGLQDVARDYIVYR
FT                   DDRKAHRKKSWQSLSVVRRCGTVVHFNPMKISAALEKAFRATDKTEGMTPSSVREEINA
FT                   LTQNIVAEIEECCSQQDRRIDIEKIQDIVEQQLMVVGHYAIAKNYILYREARARVRDNR
FT                   EEDGSTEKTIAEEAFEVLSKDGSTYTMTHSQLLAHLARACSRFPETTDAALLTDMAFAN
FT                   FYSGIKESEVVLACIMAARANIEKEPDYALVAAELLLDVVYKEALGKSKYAEDLEQAHR
FT                   DHFKRYIAEGDTYRLNAELKHLFDLDALADAMDLSRDLQFSYMGIQNLYDRYFNHHEGC
FT                   RLETPQIFWMRVAMGLALNEQDKTSWAITFYNLLSTFRYTPATPTLFNSGMRHSQLSSC
FT                   YLSTVQDDLVNIYKVIADNAMLSKWAGGIGNDWTAIRATGALIKGTNGRSQGVIPFIKV
FT                   TNDTAVAVNQGGKRKGAVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNTASWIPDLF
FT                   FKRLQQKGTWTLFSPDDVPGLHDAYGEEFERLYEEYERKVDTGEIRLFKKVEAEDLWRK
FT                   MLSMVFETGHPWMTFKDPSNIRSAQDHKGVVRCSNLCTEILLNCSETETAVCNLGSINL
FT                   VQHIVGDGLDEEKLSETISIAVRMLDNVIDINFYPTKEAKEANFAHRAIGLGVMGFQDA
FT                   LYKLDISYASQEAVEFADYSSELISYYAIQASCLLAKERGTYSSYKGSKWDRGLLPIDT
FT                   IQLLANYRGEANLQMDTSSRKDWEPIRSLVKEHGMRHCQLMAIAPTATISNIIGVTQSI
FT                   EPTYKHLFVKSNLSGEFTIPNVYLIEKLKKLGIWDADMLDDLKYFDGSLLEIERIPDHL
FT                   KHIFLTAFEIEPEWIIECASRRQKWIDMGQSLNLYLAQPDGKKLSNMYLTAWKKGLKTT
FT                   YYLRSSSATTVEKSFVDINKRGIQPRWMKNKSASAGIIVERAKKAPVCSLEEGCEACQ"
FT   misc_feature    254188..254496
FT                   /note="HMMPfam hit to PF03477, ATP cone domain, score
FT                   7.1e-32"
FT                   /inference="protein motif:HMMPfam:PF03477"
FT   misc_feature    254515..254820
FT                   /note="HMMPfam hit to PF03477, ATP cone domain, score
FT                   1.6e-33"
FT                   /inference="protein motif:HMMPfam:PF03477"
FT   misc_feature    254872..255141
FT                   /note="HMMPfam hit to PF03477, ATP cone domain, score
FT                   2e-08"
FT                   /inference="protein motif:HMMPfam:PF03477"
FT   misc_feature    255295..255522
FT                   /note="HMMPfam hit to PF00317, Ribonucleotide
FT                   reductase,all-alpha d, score 4.4e-30"
FT                   /inference="protein motif:HMMPfam:PF00317"
FT   misc_feature    255514..255543
FT                   /note="PS00185 Isopenicillin N synthetase signature 1."
FT                   /inference="protein motif:Prosite:PS00185"
FT   misc_feature    255526..257151
FT                   /note="HMMPfam hit to PF02867, Ribonucleotide
FT                   reductase,barrel doma, score 1.1e-183"
FT                   /inference="protein motif:HMMPfam:PF02867"
FT   CDS             257345..258385
FT                   /transl_table=11
FT                   /gene="nrdB"
FT                   /locus_tag="CTLon_0200"
FT                   /product="ribonucleoside-diphosphate reductase beta chain"
FT                   /db_xref="GOA:B0BAT6"
FT                   /db_xref="InterPro:IPR012348"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT6"
FT                   /protein_id="CAP06598.1"
FT                   /translation="MQADILDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLN
FT                   GCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHV
FT                   TNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITG
FT                   KVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQY
FT                   ILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGIL
FT                   GLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKEKNFFETRVTEYQH
FT                   AASLTW"
FT   misc_feature    257372..258301
FT                   /note="HMMPfam hit to PF00268, Ribonucleotide
FT                   reductase,small chain, score 7e-35"
FT                   /inference="protein motif:HMMPfam:PF00268"
FT   misc_feature    257897..257965
FT                   /note="1 probable transmembrane helix predicted for CTL0200
FT                   by TMHMM2.0 at aa 185-207"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             258645..259319
FT                   /transl_table=11
FT                   /gene="trmB"
FT                   /locus_tag="CTLon_0201"
FT                   /product="tRNA (m(7)G46) methyltransferase"
FT                   /db_xref="GOA:B0BAT7"
FT                   /db_xref="InterPro:IPR003358"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT7"
FT                   /protein_id="CAP06599.1"
FT                   /translation="MKPQDLKLPYFWEERSPQIANHVFYVPNYYSRYEEFVMPTWQELF
FT                   ANNGPICCELCSGNGDWVVEQALKDASVNWIAVEKRFDRVRKIWSKMGNYRVNNLLIVC
FT                   GEAQTFFSHYVSDASFQKIVVNFPDPWPKFRHRKHRLFQDLFVQDMMRTLVVGGQLTLA
FT                   TDDYNYLVNAITVMLKYLSPGLKSPHYINVKDNYGGSWFENLWRSKGQEIFCTEFIKRV
FT                   GI"
FT   misc_feature    258720..259307
FT                   /note="HMMPfam hit to PF02390, Putative
FT                   methyltransferase,score 2.2e-81"
FT                   /inference="protein motif:HMMPfam:PF02390"
FT   tRNA            complement(259310..259383)
FT                   /gene="tRNA-Val"
FT                   /product="transfer RNA-Val"
FT                   /anticodon=(pos:259347..259349,aa:Val)
FT                   /note="tRNA Val anticodon GAC, Cove score 68.30"
FT   CDS             259435..260019
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0202"
FT                   /product="putative SAM-dependent methyltransferase"
FT                   /db_xref="GOA:B0BAT8"
FT                   /db_xref="InterPro:IPR010719"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAT8"
FT                   /protein_id="CAP06600.1"
FT                   /translation="MMLTGIDILFSNIIKLSHSIFRQVVEPGDTIVDATCGNGKDALFL
FT                   AQLLRGKGRLVVYDIQQEALDRATANFQSGLLAEERAIIEMKLCSHEYLQEQGAKLFHY
FT                   NLGYLPSGDKQITTCSESTVTSIYKALELVAPSGIVSVVCYPGHQEGAAELCCVEQVAT
FT                   DLDPSMWEVCTHYSVNRRNAPRLFLFRRRQG"
FT   misc_feature    259594..260010
FT                   /note="HMMPfam hit to PF06962, Putative rRNA
FT                   methylase,score 3.3e-75"
FT                   /inference="protein motif:HMMPfam:PF06962"
FT   CDS             complement(260016..260891)
FT                   /transl_table=11
FT                   /gene="murB"
FT                   /locus_tag="CTLon_0203"
FT                   /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
FT                   /db_xref="GOA:B0BAT9"
FT                   /db_xref="InterPro:IPR006094"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAT9"
FT                   /protein_id="CAP06601.1"
FT                   /translation="MTDSFPFSVQESVPLSRFSTFRIGGPARYFKELTSLSEALTVFSY
FT                   LHTHPLPYIIIGKGSNCLFDDQGFDGLVLYNNIQGQEFLSDTQIKVLSGSSFALLGKRL
FT                   SSQGFSGLEFAVGIPGTVGGAVFMNAGTTLANTASSLINVEIIDHSGILLSIPREKLLF
FT                   SYRTSPFQKKPAFIASATFQLTKDPQAAKRAKALIEERILKQPYEYPSAGCIFRNPEGL
FT                   SAGALIDRAGLKGLKIGGGQISEKHGNFIINTGNACTADILELIEIIQKTLKKQGISLH
FT                   KEVRIIPFRL"
FT   misc_feature    complement(260028..260333)
FT                   /note="HMMPfam hit to
FT                   PF02873,UDP-N-acetylenolpyruvoylglucosamine red, score
FT                   3.4e-58"
FT                   /inference="protein motif:HMMPfam:PF02873"
FT   misc_feature    complement(260421..260813)
FT                   /note="HMMPfam hit to PF01565, FAD binding domain, score
FT                   5.4e-13"
FT                   /inference="protein motif:HMMPfam:PF01565"
FT   CDS             complement(261024..261530)
FT                   /transl_table=11
FT                   /gene="nusB"
FT                   /locus_tag="CTLon_0204"
FT                   /product="Antitermination protein"
FT                   /db_xref="GOA:B0BAU0"
FT                   /db_xref="InterPro:IPR006027"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAU0"
FT                   /protein_id="CAP06602.1"
FT                   /translation="MSVMASDKACAPVRASRPFPKQKLRELVLQALYALEIDPEGEDSL
FT                   VSLLMTEASVSKKNAAYALMFCRAIRANQPDLDALLDATIRTTTLARLTIIERNILRMM
FT                   LFEHQQNQDCCPVPVAVLIAETTRLIKKFSYSEGSSLILAVLGSIFDHPAPALDTPLEP
FT                   TSMCG"
FT   misc_feature    complement(261072..261467)
FT                   /note="HMMPfam hit to PF01029, NusB family, score 3e-39"
FT                   /inference="protein motif:HMMPfam:PF01029"
FT   CDS             261962..262522
FT                   /transl_table=11
FT                   /gene="infC"
FT                   /locus_tag="CTLon_0205"
FT                   /product="bacterial protein translation initiation factor 3
FT                   (IF-3)"
FT                   /db_xref="GOA:B0BAU1"
FT                   /db_xref="InterPro:IPR019815"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU1"
FT                   /protein_id="CAP06603.1"
FT                   /translation="MALNLRINRQIRAPRVRVIGSAGEQLGILSIKEALDLAKEADLDL
FT                   VEVASNSEPPVCKIMDYGKYRYDITKKEKDSKKAQHQVRIKEVKLKPNIDDNDFLTKAK
FT                   QARAFIEKGNKVKVSCMFRGRELAYPEHGHKVVQRMCQGLEDIGFVESEPKLNGRSLIC
FT                   VIAPGTLKTKKKQEKVHAQDEKQ"
FT   misc_feature    261965..262192
FT                   /note="HMMPfam hit to PF05198, Translation initiation
FT                   factor IF-3, N-termin, score 5.2e-48"
FT                   /inference="protein motif:HMMPfam:PF05198"
FT   misc_feature    262133..262174
FT                   /note="PS00938 Initiation factor 3 signature."
FT                   /inference="protein motif:Prosite:PS00938"
FT   misc_feature    262205..262468
FT                   /note="HMMPfam hit to PF00707, Translation initiation
FT                   factor IF-3, C-termin, score 2.1e-51"
FT                   /inference="protein motif:HMMPfam:PF00707"
FT   CDS             262509..262694
FT                   /transl_table=11
FT                   /gene="rpmI"
FT                   /locus_tag="CTLon_0206"
FT                   /product="LSU ribosomal protein L35P"
FT                   /db_xref="GOA:B0BAU2"
FT                   /db_xref="InterPro:IPR018265"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU2"
FT                   /protein_id="CAP06604.1"
FT                   /translation="MKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKRSSQQKRNLSKQP
FT                   LVDQGQVGMYKRMMLV"
FT   misc_feature    262509..262685
FT                   /note="HMMPfam hit to PF01632, Ribosomal protein L35,score
FT                   2.6e-11"
FT                   /inference="protein motif:HMMPfam:PF01632"
FT   CDS             262713..263084
FT                   /transl_table=11
FT                   /gene="rplT"
FT                   /locus_tag="CTLon_0207"
FT                   /product="LSU ribosomal protein L20P"
FT                   /db_xref="GOA:B0BAU3"
FT                   /db_xref="InterPro:IPR005812"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAU3"
FT                   /protein_id="CAP06605.1"
FT                   /translation="MVRATGSVASRSRRKRVLKQAKGFWGDRKGHFRQSRSSVMRAMAF
FT                   NYMHRKDRKGDFRSLWITRLNVASRIHGLSYSRLINGLKQAGIHLNRKMLSEMAIHDPQ
FT                   GFAVVATQAKLALEAAVQG"
FT   misc_feature    262716..263039
FT                   /note="HMMPfam hit to PF00453, Ribosomal protein L20,score
FT                   2.4e-32"
FT                   /inference="protein motif:HMMPfam:PF00453"
FT   misc_feature    262872..262922
FT                   /note="PS00937 Ribosomal protein L20 signature."
FT                   /inference="protein motif:Prosite:PS00937"
FT   CDS             263091..264119
FT                   /transl_table=11
FT                   /gene="pheS"
FT                   /locus_tag="CTLon_0208"
FT                   /product="phenylalanyl-tRNA synthetase alpha chain"
FT                   /db_xref="GOA:B0BAU4"
FT                   /db_xref="InterPro:IPR006195"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU4"
FT                   /protein_id="CAP06606.1"
FT                   /translation="MTIQEELEAVKQQFSCDVSLAHSSKDLFDVKVKYLGKKGIFRGFA
FT                   DQLRKCPIEQKATVGASINACKQYVEEVLLERGKAVLAKEEAEEFLKEKIDISLPGSEE
FT                   AALGGKHVIKKVLDDVVDIFVRFGFCVREAPNIESEKNNFSLLNFEEDHPARQMQDTFY
FT                   LDPTTVLRTHTSNVQSRELARNKPPVRIVAPGECFRNEDVSARSHVIFHQVEAFCVDKD
FT                   ISFSDLTSMLAGFYHIFFGRKVELRFRHSYFPFVEPGIEVDISCECHGAGCSLCKHSGW
FT                   LEVAGAGMIHPNVLRKASFDPEEYSGYALGMGIERLAMLKYGISDIRLFSENDLRFLRQ
FT                   FS"
FT   misc_feature    263145..263363
FT                   /note="HMMPfam hit to PF02912, Aminoacyl tRNA synthetase
FT                   class II, N, score 8e-26"
FT                   /inference="protein motif:HMMPfam:PF02912"
FT   misc_feature    263370..264113
FT                   /note="HMMPfam hit to PF01409, tRNA synthetases class II
FT                   core domain, score 1.4e-145"
FT                   /inference="protein motif:HMMPfam:PF01409"
FT   misc_feature    263892..263918
FT                   /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:Prosite:PS00197"
FT   misc_feature    264021..264050
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT                   /inference="protein motif:Prosite:PS00339"
FT   tRNA            264120..264204
FT                   /gene="tRNA-Ser"
FT                   /product="transfer RNA-Ser"
FT                   /anticodon=(pos:264154..264156,aa:Ser)
FT                   /note="tRNA Ser anticodon TGA, Cove score 62.61"
FT   CDS             264430..266406
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0209"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU5"
FT                   /protein_id="CAP06607.1"
FT                   /translation="MEKTRKFEKALENLEQLKKISYDYSSGNAEASSHNKALSEMKKAM
FT                   HYIDHYFKQAGALSQKDVDKVIKETDFLIAGVQDVFSFLEDRKEEVYRSLSQDYRHLNH
FT                   TYDVTREHLNNKMVEPKEILNGSLENCQDREEFLNNLVEVKRDRSYELFYMANEDNKRF
FT                   YTDALAQIIYKQGKIHESMHENDPLTKTIVWNSDEITKLASSLVYTNDMPIRLFYQKAL
FT                   TNMSAELTVNVHNALMALFLARYEATAVSQQPRKENLSYFNDFLHFLRKAAALLNEKDL
FT                   LDLQEKHSKSLVSSLSAKLYDHTIDFVEAANYIFLNISSKLQPEEGKKPLSAGQYVAEI
FT                   YDELHRLFSKYPNGPLFKAIDRMLDPYLKEFDPILLGILPCLEGKLIQGDKEIKVLRTP
FT                   SPVSQSSILYANCNGEFLHFLDAKTCQGDKILVINIQNRLSRKDRARSRIIEESLQDYS
FT                   SVYMSAFPEPEDFLYGLEQVHGELETFADFFSLVQQEFFKPKAQGYCVLPEEMKERMGV
FT                   FLEGIVPSLKNVFFSKKKILFKNDKVLLLHLIYYFVVFNLIEQLDPNTLVIMSKDGLDY
FT                   ASVFVSGFAFFENRGNWDEDSLKRMVARMLAPTLVARDRLVFAQHVELLSKFLNCLRKN
FT                   RHNLKDLRTLFSYDLEGWQFSGI"
FT   CDS             complement(266403..267503)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0210"
FT                   /product="putative membrane transport protein"
FT                   /db_xref="GOA:B0BAU6"
FT                   /db_xref="InterPro:IPR005495"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU6"
FT                   /protein_id="CAP06608.1"
FT                   /translation="MVIWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAIA
FT                   GAPLQLSLLYYLSQISLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLIR
FT                   PLVISSSLITLLLYANFQWLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQTVLIF
FT                   SSINRRAATLNNVFWIKGPKTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVSLTQFFD
FT                   MKEFPELEFSYYDNPFSKIFITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLF
FT                   YYMLISPLLCIAAVILSAHLCLRFHRLPKITWAYLVPLGTINIFFVVLKAGMVLANNSV
FT                   LPALQVMFIPAGFMLLITLYAYRKLA"
FT   misc_feature    complement(266412..267485)
FT                   /note="HMMPfam hit to PF03739, Predicted permease YjgP/YjgQ
FT                   family, score 2.2e-70"
FT                   /inference="protein motif:HMMPfam:PF03739"
FT   misc_feature    complement(order(266418..266486,266499..266567,
FT                   266601..266669,267417..267485))
FT                   /note="4 probable transmembrane helices predicted for
FT                   CTL0210 by TMHMM2.0 at aa 7-29, 279-301, 313-335 and
FT                   340-362"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(267390..267503)
FT                   /locus_tag="CTLon_0210"
FT                   /note="Signal peptide predicted for CTL0210 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.946) with cleavage site
FT                   probability 0.379 between residues 38 and 39"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(267506..268570)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0211"
FT                   /product="putative membrane transport protein"
FT                   /db_xref="GOA:B0BAU7"
FT                   /db_xref="InterPro:IPR005495"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU7"
FT                   /protein_id="CAP06609.1"
FT                   /translation="MPILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIAKDVPY
FT                   ATVFKVTAYQIPYLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLI
FT                   ASGVLCCFNFYTCSELASICRFQTGKAIANIAMTSPALLLQTLQKKENDRIFIAIDHCG
FT                   KSKFDNVIIALKHNQEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNE
FT                   FYLETLDEFLIPKITATLFAGKSYMKTRTDYLPWKQLIQDARLHLAEILRRIAIGLLCS
FT                   TMTFSGLALGTYKPRFRKPVLIYALFPILNLIFLIVGKNTIHPISAVMLFLFPQLLSWL
FT                   IFSWRIYTENQGHA"
FT   misc_feature    complement(267512..268555)
FT                   /note="HMMPfam hit to PF03739, Predicted permease YjgP/YjgQ
FT                   family, score 7e-79"
FT                   /inference="protein motif:HMMPfam:PF03739"
FT   misc_feature    complement(order(267539..267607,267620..267673,
FT                   267692..267751,268223..268282,268343..268411,
FT                   268454..268522))
FT                   /note="6 probable transmembrane helices predicted for
FT                   CTL0211 by TMHMM2.0 at aa 17-39, 54-76,
FT                   97-116,274-293,300-317 and 322-344"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(267836..267859)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    complement(268076..268099)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   sig_peptide     complement(268472..268570)
FT                   /locus_tag="CTLon_0211"
FT                   /note="Signal peptide predicted for CTL0211 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.897) with cleavage site
FT                   probability 0.360 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             268668..269633
FT                   /transl_table=11
FT                   /gene="tilS"
FT                   /locus_tag="CTLon_0212"
FT                   /product="tRNA(Ile)-lysidine synthase"
FT                   /db_xref="GOA:B0BAU8"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU8"
FT                   /protein_id="CAP06610.1"
FT                   /translation="MITRLFENDKQLEGFFSSLDKKKKYLLALSGGSDSLFLMYLLKSR
FT                   AIFFTAVHVDYGWRETSYQEASDLAALCEQEQIPFILDRPEATDPMDSRDIENAARRYR
FT                   YELFYRLCKEKCFSGVFLGHHADDQAETILKRVFEGAHLGNLKGMSAQVMYRDVALLRP
FT                   LLHIPKHKIVEALDSHQVQYVQDITNCNERFLRARMRERLFPYLQDVFGKNIRDPLLSL
FT                   AGDSAELREYLDQQTAPFLLRVVDNERGKLLPIEQELLKTPFLAKWVCKQFFLNEGLVA
FT                   SKSFLQTVYDHLMTGSTARLRLRNRTVLVKARGVIIESIY"
FT   misc_feature    268737..269207
FT                   /note="HMMPfam hit to PF06508, ExsB, score 0.0036"
FT                   /inference="protein motif:HMMPfam:PF06508"
FT   misc_feature    268737..269342
FT                   /note="HMMPfam hit to PF01171, PP-loop family, score 2e-69"
FT                   /inference="protein motif:HMMPfam:PF01171"
FT   CDS             269794..272535
FT                   /transl_table=11
FT                   /gene="ftsH"
FT                   /locus_tag="CTLon_0213"
FT                   /product="Cell division protein"
FT                   /db_xref="GOA:B0BAU9"
FT                   /db_xref="InterPro:IPR011546"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAU9"
FT                   /protein_id="CAP06611.1"
FT                   /translation="MAKDKKTNPESKKSFPTAFFFLLFGVIFGVVTVQNFFSAKKASVG
FT                   FSHQLEHLVNLKLLIPEESRKTALNDNLVSFSGRFREVVPAEGQVRYQYLDLIERKHQI
FT                   DFELEEASKSLTVLSKEVRNAITWFSAISGMPIPEAGYTISPRTDVGLSVLEPLVVYGP
FT                   VDAQIVNLAALENRVRSLPKSTESLRVFGSDLYALIGKYLSPALGIGSESLKKEIKDLH
FT                   QQVENSLTQVIEGDQAVALYKTVLETLHRISLALVSPEEGTRFHQLRSVRLYREDFNRC
FT                   VKLLRESDETQVQLDKLRGELVQAVWYFNNQELSSRALEKQDPEVFSRWFEGAKQEWAA
FT                   FSSNKSLSFRAPDQPRNLVLEKTFRSEEPTPHYSGYLFTFMPIILVLLFIYFIFSRQVK
FT                   GMNGSAMSFGKSPARLLAKGQNKVTFADVAGIEEAKEELVEIVDFLKNPTKFTSLGGRI
FT                   PKGILLIGAPGTGKTLIAKAVAGEADRPFFSIAGSDFVEMFVGVGASRIRDMFEQAKRN
FT                   APCIIFIDEIDAVGRHRGAGIGGGHDEREQTLNQLLVEMDGFGTNEGVILMAATNRPDV
FT                   LDKALLRPGRFDRRVVVNLPDIKGRFEILAVHAKRIKLDPTVDLMAVARSTPGASGADL
FT                   ENLLNEAALLAARKDRTAVTAVEVAEARDKVLYGKERRSLEMDAQEKKTTAYHESGHAI
FT                   VGLCVEHSDPVDKVTIIPRGLSLGATHFLPEKNKLSYWKKELYDQLAVLMGGRAAEQIF
FT                   LGDVSSGAQQDIAQATKIVRSMICEWGMSDHLGTVAYDEHSEAAPTGYGSYHEKNYSEE
FT                   TAKVIDNELKTLLDAAYQRALDIINSHKEELELMTQMLIEFETLDSKDVKEIMDHSWDA
FT                   DKKRARMKEEGMLYKKISEDLPPPPPQENVQDGTSLKFNTST"
FT   sig_peptide     269794..269892
FT                   /gene="ftsH"
FT                   /locus_tag="CTLon_0213"
FT                   /note="Signal peptide predicted for CTL0213 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.854) with cleavage site
FT                   probability 0.379 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(269836..269904,270907..270975)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CTL0213 by TMHMM2.0 at aa 15-37 and 372-394"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    270655..271098
FT                   /note="HMMPfam hit to PF06480, FtsH Extracellular, score
FT                   1.8e-36"
FT                   /inference="protein motif:HMMPfam:PF06480"
FT   misc_feature    271174..271578
FT                   /note="HMMPfam hit to PF07728, ATPase family associated
FT                   with various c, score 0.00022"
FT                   /inference="protein motif:HMMPfam:PF07728"
FT   misc_feature    271174..271737
FT                   /note="HMMPfam hit to PF00004, ATPase family associated
FT                   with various c, score 1.3e-91"
FT                   /inference="protein motif:HMMPfam:PF00004"
FT   misc_feature    271189..271212
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT   misc_feature    271486..271542
FT                   /note="PS00674 AAA-protein family signature."
FT                   /inference="protein motif:Prosite:PS00674"
FT   misc_feature    271753..272385
FT                   /note="HMMPfam hit to PF01434, Peptidase family M41, score
FT                   4.3e-121"
FT                   /inference="protein motif:HMMPfam:PF01434"
FT   CDS             complement(272750..274837)
FT                   /transl_table=11
FT                   /gene="pnp"
FT                   /locus_tag="CTLon_0214"
FT                   /product="polyribonucleotide nucleotidyltransferase"
FT                   /db_xref="GOA:B0BAV0"
FT                   /db_xref="InterPro:IPR003029"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAV0"
FT                   /protein_id="CAP06612.1"
FT                   /translation="MAFETFSVALDKDKTLIFETGKIARQASGAVLVKMNETWVFSSAC
FT                   AASLSEAVGFLPFRVDYQEKFSSAGRTSGGFLKREGRPSEREILVSRLIDRSLRPSFPN
FT                   RLMQDIQVLSYVWSYDGKTLPDPLAICGASAALAISEVPQNCIIAGVRVGLVGGKWVIN
FT                   PTRDELSASKLDLVMAGTASAVLMIEGHCDFLTEEQVLEAIAFGQTYIAKICDAIEAWQ
FT                   KAIGKQKNFSAVLDMPEDVQNVVSDFIREKFEKALSFRDKEALEQASKELEESVIANLV
FT                   QEENSDFSLLNVKAAFKTAKSNQMRALIQDLGIRVDGRTTTEIRPISIETPLLPRTHGS
FT                   CLFTRGETQSMAVCTLGGENMAQRFEDLNGDGAARFYLQYFFPPFSVGEVGRIGSPGRR
FT                   EIGHGKLAEKALSHVLPETSRFPYIIRLESNITESNGSSSMASVCGGCLALMDAGVPIK
FT                   APVAGIAMGLILDRDQAIILSDISGIEDHLGDMDFKVAGTAKGITAFQMDIKIEGITHK
FT                   IMEQALAQAKQGRSHILNLMTQVLASPKGTVSKYAPRIETMQINTSKIATVIGPGGKQI
FT                   RQIIERSGAQVDINDDGVINIAASTQESINKAKELIEGLTGEVEVGKVYNGRVTSIATF
FT                   GVFVEVLPGKEGLCHISELSKQKVDNISDFVKEGDKLAVKLLSINEKGQLKLSHKATLE
FT                   D"
FT   misc_feature    complement(272768..272986)
FT                   /note="HMMPfam hit to PF00575, S1 RNA binding domain,score
FT                   3.3e-16"
FT                   /inference="protein motif:HMMPfam:PF00575"
FT   misc_feature    complement(273002..273175)
FT                   /note="HMMPfam hit to PF00013, KH domain, score 5.7e-16"
FT                   /inference="protein motif:HMMPfam:PF00013"
FT   misc_feature    complement(273251..273463)
FT                   /note="HMMPfam hit to PF03725, 3' exoribonuclease
FT                   family,domain, score 5.7e-23"
FT                   /inference="protein motif:HMMPfam:PF03725"
FT   misc_feature    complement(273470..273871)
FT                   /note="HMMPfam hit to PF01138, 3' exoribonuclease
FT                   family,domain, score 1.3e-46"
FT                   /inference="protein motif:HMMPfam:PF01138"
FT   misc_feature    complement(273878..274117)
FT                   /note="HMMPfam hit to PF03726, Polyribonucleotide
FT                   nucleotidyltransferase,, score 0.00014"
FT                   /inference="protein motif:HMMPfam:PF03726"
FT   misc_feature    complement(274208..274402)
FT                   /note="HMMPfam hit to PF03725, 3' exoribonuclease
FT                   family,domain, score 1.1e-14"
FT                   /inference="protein motif:HMMPfam:PF03725"
FT   misc_feature    complement(274409..274804)
FT                   /note="HMMPfam hit to PF01138, 3' exoribonuclease
FT                   family,domain, score 8.9e-28"
FT                   /inference="protein motif:HMMPfam:PF01138"
FT   CDS             complement(274866..275135)
FT                   /transl_table=11
FT                   /gene="rpsO"
FT                   /locus_tag="CTLon_0215"
FT                   /product="SSU ribosomal protein S15P"
FT                   /db_xref="GOA:B0BAV1"
FT                   /db_xref="InterPro:IPR009068"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAV1"
FT                   /protein_id="CAP06613.1"
FT                   /translation="MSLDKGTKEEITKKFQLHEKDTGSADVQIAILTEHITELKEHLKR
FT                   SPKDQNSRLALLKLVGQRRKLLEYLNSTDTERYKNLIARLNLRK"
FT   misc_feature    complement(274872..275120)
FT                   /note="HMMPfam hit to PF00312, Ribosomal protein S15,score
FT                   7.6e-27"
FT                   /inference="protein motif:HMMPfam:PF00312"
FT   misc_feature    complement(274929..275021)
FT                   /note="PS00362 Ribosomal protein S15 signature."
FT                   /inference="protein motif:Prosite:PS00362"
FT   CDS             275361..275852
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0216"
FT                   /product="Cytosine deaminase"
FT                   /db_xref="GOA:B0BAV2"
FT                   /db_xref="InterPro:IPR002125"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV2"
FT                   /protein_id="CAP06614.1"
FT                   /translation="MCIEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNS
FT                   VEQLKDPTAHAEMICISAAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGA
FT                   PDLRLGAGGSWLNVFLEKHPFHQVECCSGVCYQESEQLMKNFFLEKRKAKDEGRNSRAT
FT                   "
FT   misc_feature    275367..275672
FT                   /note="HMMPfam hit to PF00383, Cytidine and deoxycytidylate
FT                   deaminas, score 1.8e-45"
FT                   /inference="protein motif:HMMPfam:PF00383"
FT   CDS             275884..276102
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0217"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV3"
FT                   /protein_id="CAP06615.1"
FT                   /translation="MSLGTTIVPGLTKEDLLQPMDYDELEENPSFRFEEGVLNGIGETR
FT                   AALYSFFSDLEDSFCVESSSDTSLCKD"
FT   CDS             complement(276074..276778)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0218"
FT                   /product="putative integral membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV4"
FT                   /protein_id="CAP06616.1"
FT                   /translation="MRVIFPDKYKQTPFLGKALKQLPLLVLVTSCSAPFIAFFLQYFFQ
FT                   VRGPIEWLALSVKGIHQHYFWQWLTYPLVTADTLKLGDLRSLEITQRLLMRNVLDFILF
FT                   YKATDVIIRKLGTGSFVFLLTTQVSIAGISIWAFLWLIGSTQAFFGPESLICALLIVRV
FT                   FLDPEKRLTLPLFPISLSRKWSFVLLLHFYFLILILSGAYAILLGSVLSMALAICFCYK
FT                   ENIPNPYRGSYR"
FT   misc_feature    complement(order(276158..276226,276284..276340,
FT                   276353..276421,276647..276715))
FT                   /note="4 probable transmembrane helices predicted for
FT                   CTL0218 by TMHMM2.0 at aa 22-44, 120-142, 147-165 and
FT                   185-207"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(276686..276718)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   CDS             complement(276913..277431)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0219"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR007966"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV5"
FT                   /protein_id="CAP06617.1"
FT                   /translation="MSSAIIPTLPEKNTVIPDSTLIEPTSIEINKKSAMYFCIAVMLKL
FT                   SVATTDYSHAIMAVLQENTLEQQRKTKELINIPLLYVPDLIKKNGSDDEYTNHSTIQAF
FT                   QTSNQQITANRELIQQELSAAQQRAQANQKSVNATSTESMKILQAVSALLTSLIDLTIK
FT                   ANLTTSPSD"
FT   misc_feature    complement(276934..277419)
FT                   /note="HMMPfam hit to PF05302, Protein of unknown function
FT                   (DUF720), score 1.7e-90"
FT                   /inference="protein motif:HMMPfam:PF05302"
FT   CDS             complement(277444..277950)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0220"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR007966"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV6"
FT                   /protein_id="CAP06618.1"
FT                   /translation="MWHKEPMYAVLQLAETPPVTGTTNSATADEIITRFAKDSNPLIVT
FT                   VYYIYQSVLVAQNNLSLVAEQLQANAAAQTFLNNEEALYQYTTIPKNQVNSQNSSYLQN
FT                   VQSVNQAVGASRQAIQNQISGLGNASQVISSNLNTNNNIIQQSLQVGQALIQTFSQIVS
FT                   LIANI"
FT   misc_feature    complement(277447..277920)
FT                   /note="HMMPfam hit to PF05302, Protein of unknown function
FT                   (DUF720), score 3.3e-82"
FT                   /inference="protein motif:HMMPfam:PF05302"
FT   CDS             complement(277978..278457)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0221"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR007966"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV7"
FT                   /protein_id="CAP06619.1"
FT                   /translation="MSAPTSQVGDTQYVSSLPPLEPLGTPPIAELLFSIYSLLLEAVEI
FT                   RQETILTQSKQLNDNTNIQQQLNQETNQIKYAVVGSGAKEDEITRVQNQNQNYSAQRSN
FT                   IQDQLVTARQNGQIILSHASTNINIMQQIAQQNSSFIKTLNSVGSTVNQLNKPLS"
FT   misc_feature    complement(277996..278457)
FT                   /note="HMMPfam hit to PF05302, Protein of unknown function
FT                   (DUF720), score 5.2e-76"
FT                   /inference="protein motif:HMMPfam:PF05302"
FT   CDS             278774..278962
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0222"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV8"
FT                   /protein_id="CAP06620.1"
FT                   /translation="MAETQDCERLDFLNGDDISAYVVLTCGQPSAEGKMNVEMVYEGDR
FT                   ELVSFLLTKALASLEQP"
FT   CDS             278981..280198
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0223"
FT                   /product="putative integral membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAV9"
FT                   /protein_id="CAP06621.1"
FT                   /translation="MGFGTVRGKGKAVKSFFLRPLQNLEVGLFSLPIVLLLGEIGCVSS
FT                   ISSVSLVAVLSIVGVFVALVSFFRSWGYGLSVVGAIFFGLALCNNFPVSVFWGGLLTVS
FT                   FIISYGILLLSVSLVEGHIKEKAVSLSELTASHNSLQDSYNREVQERKEKELLAQSKIT
FT                   ALEQELSVSHEQLQEVSRKYTHTSEDLQILIDQRDSWLKDYMTLHQEYVRVVAGDEENV
FT                   IFPWKVFQGNSEKDSGYQQRVQDAEHKIAHLEKLCEEENSGKRYAEECLDKALADLLES
FT                   TRLREILEKEIFQKDEEIASLKQEIAAEKLLSSSVSDDRAAYKGKYLQLREQFTVKDSF
FT                   LKKARRERFLAQEQLLVLKRAKEEEALNLSTTDSFSIIQNLLLQIEALEEEVTYLEELV
FT                   LHNQNR"
FT   misc_feature    order(279023..279091,279110..279178,279191..279244,
FT                   279263..279331)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CTL0223 by TMHMM2.0 at aa 15-37, 44-66, 71-88 and 95-117"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(280155..281030)
FT                   /transl_table=11
FT                   /gene="map"
FT                   /locus_tag="CTLon_0224"
FT                   /product="methionine aminopeptidase"
FT                   /db_xref="GOA:B0BAW0"
FT                   /db_xref="InterPro:IPR004027"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW0"
FT                   /protein_id="CAP06622.1"
FT                   /translation="MKRNDPCWCGSNKKWKHCHYPTKPERPLDNLRQLYASRYDIIIKT
FT                   PEQIEKIRKACQVTAHILDALCEAAKEGVTTNELDLLSRELHKRHNAIPAPLNYGHPPF
FT                   PKTICTSLNEVICHGIPNDIPLQNGDIMNIDVSCIVDGFYGDCSRMVMIGEVSEIKRKV
FT                   CEASLEALNAAISILEPNLPLYEIGEVIENCAAKYGFSVVDQFVGHGVGVKFHENPFVA
FT                   HHRNSCKIPLAPGMIFTIEPMINVGKKEGFIDPINHWEARTCDHQPSAQWEHAILITDS
FT                   GCEVLTLLDK"
FT   misc_feature    complement(280167..280883)
FT                   /note="HMMPfam hit to PF00557, metallopeptidase family
FT                   M24,score 4.8e-54"
FT                   /inference="protein motif:HMMPfam:PF00557"
FT   misc_feature    complement(280923..280952)
FT                   /note="PS00215 Mitochondrial energy transfer proteins
FT                   signature."
FT                   /inference="protein motif:Prosite:PS00215"
FT   misc_feature    complement(280962..281024)
FT                   /note="HMMPfam hit to PF02810, SEC-C motif, score 5e-10"
FT                   /inference="protein motif:HMMPfam:PF02810"
FT   CDS             complement(281063..281704)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0225"
FT                   /product="putative integral membrane protein"
FT                   /db_xref="InterPro:IPR002771"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW1"
FT                   /protein_id="CAP06623.1"
FT                   /translation="MLHSLFRLTLLFYALFNALGSLPVFIALLKNFSFKKQQRIILRES
FT                   IFALLLLLLFVTFGRGFFRLLGITLPAFQFTGGLLLGSIAIDMMKALPSQSETLEKDKD
FT                   EPVFFPLAFPVITGPAMITSTLGHMEEGIFPKEIVLGAIVLAWLFSLITLLFSSSINRL
FT                   FGQMGLLALERLFGISLALMAGNLMLKALSTAFNIGYYMLHLKALLYVKR"
FT   misc_feature    complement(order(281117..281185,281222..281290,
FT                   281318..281386,281447..281506,281516..281584,
FT                   281618..281677))
FT                   /note="6 probable transmembrane helices predicted for
FT                   CTL0225 by TMHMM2.0 at aa 10-29, 41-63,
FT                   67-86,107-129,139-161 and 174-196"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(281117..281701)
FT                   /note="HMMPfam hit to PF01914, MarC family integral
FT                   membrane protein, score 2.3e-82"
FT                   /inference="protein motif:HMMPfam:PF01914"
FT   misc_feature    complement(281171..281200)
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT                   /inference="protein motif:Prosite:PS00339"
FT   CDS             complement(281721..282320)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0226"
FT                   /product="putative integral membrane protein"
FT                   /db_xref="InterPro:IPR002771"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW2"
FT                   /protein_id="CAP06624.1"
FT                   /translation="MDWSFFLLSQSCILFLAADSTTNVEVLNTILGNLSKRSKALLLLR
FT                   ESLFALLGSFVLYPLLSGLLYSLQTPACAATVVGGCGVMFTGMRAILRNTQASLWSKIP
FT                   SLSQSPKVAPIALPLMIGPSWLCACAPLAMQQLPFSIVCALLCLSWLMMTITTIVLQTA
FT                   NKAGSQTIIATQTILGLAVVIVGAQLLVSGLQQTFL"
FT   misc_feature    complement(281727..282314)
FT                   /note="HMMPfam hit to PF01914, MarC family integral
FT                   membrane protein, score 0.00012"
FT                   /inference="protein motif:HMMPfam:PF01914"
FT   misc_feature    complement(order(281742..281810,281838..281906,
FT                   281919..281987,282045..282104,282123..282182))
FT                   /note="5 probable transmembrane helices predicted for
FT                   CTL0226 by TMHMM2.0 at aa 47-66, 73-92, 112-134, 139-161
FT                   and 171-193"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(282515..284284)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0227"
FT                   /product="ABC transporter permease"
FT                   /db_xref="GOA:B0BAW3"
FT                   /db_xref="InterPro:IPR015168"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW3"
FT                   /protein_id="CAP06625.1"
FT                   /translation="MKKFISYLLIILPLIGLWEFCAQNYPSFGFICPPPSKVLTTGIHS
FT                   FPVLFQHSCYTAQGILGGFFLALLLAILFSATMLLFPSTQGLLHPLCVLVQCLPMFTLA
FT                   PLIVLWFGWGTRAVIIPTALSIFFPLALTIHQGIKNSPEELLEQFTLYQATTWQKLFKL
FT                   RIPNGLPHIFSGLKIAMSAAGFATIAGEWVATQSGLGILILESRRNYDMAMALAGLFVL
FT                   TVLTLSLFYSVLLLERSTFFFFRMEKTSKRSFGKKWVFALIPITVLPCLFYLKDDPKLA
FT                   APVPTKSFTLLLDWTPNPNHIPLYVGVEKGFFVDEGISLTLQKNTDTCSSIPHLLLEKV
FT                   DYTLYHSLGVLKTAVRGAPVQVAGRLIDSSLQGLIYRKNEGVEKLEDLNGRVLGFCLND
FT                   SKNLPNLLEALRKHHVVPSEIKNVSADMISPMLTYQIDFLYGGFYNVEGVTIALKGTPT
FT                   GCFLSDTYGSPTGPQLLICGKKGSPAMTPQTLQSLQKALSRSLDFCREYPQEAFAIYVE
FT                   ATKDSPKVLSDEQAQWEVTLPLLAKTQEPLSRELLESLLVTLSTTCPDLQASIDTFSIE
FT                   TLISDASETIASS"
FT   misc_feature    complement(order(283463..283516,283577..283645,
FT                   283703..283771,283946..284014,284042..284110,
FT                   284222..284275))
FT                   /note="6 probable transmembrane helices predicted for
FT                   CTL0227 by TMHMM2.0 at aa 4-21, 59-81,
FT                   91-113,172-194,214-236 and 257-274"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(283559..284140)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport syst, score 1.6e-31"
FT                   /inference="protein motif:HMMPfam:PF00528"
FT   CDS             join(284337..284735,284735..284923,284923..285729)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="fumC"
FT                   /locus_tag="CTLon_0228"
FT                   /product="fumarate hydratase (pseudogene)"
FT                   /note="The sequence has been checked and is believed to be
FT                   correct."
FT                   /db_xref="PSEUDO:CAP06626.1"
FT   misc_feature    order(284361..284768,284777..284962,284962..285345)
FT                   /note="HMMPfam hit to PF00206, Lyase, score 3.7e-132"
FT                   /inference="protein motif:HMMPfam:PF00206"
FT   CDS             complement(285811..287514)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0229"
FT                   /product="sulfate transporter"
FT                   /db_xref="GOA:B0BAW5"
FT                   /db_xref="InterPro:IPR011547"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW5"
FT                   /protein_id="CAP06627.1"
FT                   /translation="MVKVSLSFKHLIPKLVTCLKEGYSFNTLKKDFTAGITAGILAFPL
FT                   AIAIAIGIGVSPLQGLLASIIGGFLASALGGSRVLISGPTSSFISILYCIGVKYGEDGL
FT                   FTITLMAGIFLVIFGLAGLGTFIKYMPYPVVTGLTTGIAVIIFSSQIRDFLGLQMGDGV
FT                   PLDFIGKWAAYWDYLWTWDSKTFAVGLFTLLLMIYFRNYKPRYPGVMISIIIASTLVWI
FT                   LKIDIPTIGSRYGTLPSSLPGPVFPHISITKMLQLMPDALTISVLSGIETLLAAVVADG
FT                   MTGWRHQSNCQLIGQGIANIGTSLFAGMPVTGSLSRTTASIKCGASTPIAGIIHAICLS
FT                   FILLLLAPLTIKIPLTCLAAVLILIAWNMSEIHHFIHLFTAPKKDVLVLLTVFILTVMT
FT                   TITSAVQVGMMLAAFLFMKQMSDLSDVISTAKYFDESEQPQNDLLFSKNEVPPFTEIYE
FT                   INGPFFFGIADRLKNLLNEIEKPPKIFILCMTRVPTIDASAMHALEEFFLECDRQGTLL
FT                   LLAGVKKTPLSDLRRYHVDELIGVDHIFSNIKGALLFAKALIKLESKSSQ"
FT   misc_feature    complement(285862..286176)
FT                   /note="HMMPfam hit to PF01740, STAS domain, score 4.7e-19"
FT                   /inference="protein motif:HMMPfam:PF01740"
FT   misc_feature    complement(286255..287163)
FT                   /note="HMMPfam hit to PF00916, Sulfate transporter
FT                   family,score 3.5e-57"
FT                   /inference="protein motif:HMMPfam:PF00916"
FT   misc_feature    complement(order(286291..286359,286378..286446,
FT                   286474..286542,286678..286746,286846..286899,
FT                   286918..286986,287062..287115,287134..287202,
FT                   287269..287337,287350..287418))
FT                   /note="10 probable transmembrane helices predicted for
FT                   CTL0231 by TMHMM2.0 at aa 33-55, 60-82,
FT                   105-127,134-151,177-199, 206-223, 257-279, 325-347, 357-379
FT                   and 386-408"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(286291..287430)
FT                   /note="HMMPfam hit to PF00860, Permease family, score
FT                   0.0087"
FT                   /inference="protein motif:HMMPfam:PF00860"
FT   CDS             complement(287745..287906)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0230"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW6"
FT                   /protein_id="CAP06628.1"
FT                   /translation="MFFLSKNLSVIALSYPFNSSAKLLHRNSFSSKVFSLLLVPRDSGS
FT                   AIISPSSS"
FT   sig_peptide     complement(287844..287906)
FT                   /locus_tag="CTLon_0230"
FT                   /note="Signal peptide predicted for CTL0231A by SignalP 2.0
FT                   HMM (Signal peptide probability 0.873) with cleavage site
FT                   probability 0.865 between residues 21 and 22"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(287946..288155)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0231"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW7"
FT                   /protein_id="CAP06629.1"
FT                   /translation="MYRQLESNLIHRSWTHLRVLSIGNPSKEGAIQKTSLQRPRSSYTK
FT                   TVFNSTVKTLRSLIKKKLSSTTLD"
FT   CDS             288269..289534
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0232"
FT                   /product="putative membrane transport protein"
FT                   /db_xref="GOA:B0BAW8"
FT                   /db_xref="InterPro:IPR018390"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW8"
FT                   /protein_id="CAP06630.1"
FT                   /translation="MLKFQLCLLFLFGYLAIVFEHIVRVNKSAVSLAMGGLMWLVCFSH
FT                   IPHIDHVMMVEEIADMAQVIFFLFAAMAIVELIDAHRGFSIVVRCCNVESRSVLLWVLL
FT                   ILSFFLSAALDNLTSIIIIISILKRLVKAREDRLLLGALCVIGVNAGGAWTPLGDVTTT
FT                   MLWINDKISTSGIITTLFLPSVVCVVIAGICGQLLLKKRRCSGLSEDLDREPALPKSNL
FT                   IACVGFGSLLMVPMWKAVLGVPPFMGALLGLGLVWLVSDWIHSPHGEGRNHLRMPHILT
FT                   RIDISSVTFFIGILLAVNALTYSHVLRDLSVSMDALFSRNTLAVLLGLVSSVLDNVPLV
FT                   AATIGMYDLPMNDPLWKLIAYTAGTGGSILIIGSAAGVAYMGMEKVSFGWYVKHASWIA
FT                   LASYFGGLAVYFLMENCVNLFV"
FT   misc_feature    order(288287..288343,288356..288415,288449..288502,
FT                   288560..288649,288683..288742,288785..288853,
FT                   288986..289045,289103..289171,289232..289300,
FT                   289343..289411,289448..289507)
FT                   /note="11 probable transmembrane helices predicted for
FT                   CTL0232 by TMHMM2.0 at aa 7-25, 30-49,
FT                   61-78,98-127,139-158, 173-195, 240-259, 279-301, 322-344,
FT                   359-381 and 394-413"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    288296..289369
FT                   /note="HMMPfam hit to PF03600, Citrate transporter, score
FT                   0.00094"
FT                   /inference="protein motif:HMMPfam:PF03600"
FT   CDS             289644..291449
FT                   /transl_table=11
FT                   /gene="cpa"
FT                   /locus_tag="CTLon_0233"
FT                   /product="putative exported protease"
FT                   /db_xref="GOA:B0BAW9"
FT                   /db_xref="InterPro:IPR005151"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAW9"
FT                   /protein_id="CAP06631.1"
FT                   /translation="MKMNRIWLLLLTFSSAIHSPVRGESLVCKNALQDLSFLEHLLQVK
FT                   YAPKTWKEQYLGWDLVQSSVSAQQKLRTQENPSTSFCQQVLADFIGGLNDFHAGVTFFA
FT                   IESAYLPYTVQKSSDGRFYFVDIMTFSSEIRVGDELLEVDGAPVQDVLATLYGSNHKGT
FT                   AAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFGTTREVRVKWRYVPEGVGDLATIA
FT                   PSIRAPQLQKSMRSFFPKKDDAFHRSSSLFYSPMVPHFWAELRNHYATSGLKSGYNIGS
FT                   TDGFLPVIGPVIWESEGLFRAYISSVTDGDGKSHKVGFLRIPTYSWQDMEDFDPSGPPP
FT                   WEEFAKIIQVFSSNTEALIIDQTNNPGGSVLYLYALLSMLTDRPLELPKHRMILTQDEV
FT                   VDALDWLTLLENVDTNVESRLALGDNMEGYTVDLQVAEYLKSFGRQVLNCWSKGDIELS
FT                   TPIPLFGFEKIHPHPRVQYSKPICVLINEQDFSCADFFPVVLKDNDRALIVGTRTAGAG
FT                   GFVFNVQFPNRTGIKTCSLTGSLAVREHGAFIENIGVEPHIDLPFTANDIRYKGYSEYL
FT                   DKVKKLVCQLINNDGTIILAEDGSF"
FT   sig_peptide     289644..289712
FT                   /gene="cpa"
FT                   /locus_tag="CTLon_0233"
FT                   /note="Signal peptide predicted for CTL0233 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.986) with cleavage site
FT                   probability 0.907 between residues 23 and 24"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    290589..291323
FT                   /note="HMMPfam hit to PF03572, Peptidase family S41, score
FT                   6.1e-44"
FT                   /inference="protein motif:HMMPfam:PF03572"
FT   CDS             291544..292467
FT                   /transl_table=11
FT                   /gene="ispH"
FT                   /locus_tag="CTLon_0234"
FT                   /product="4-hydroxy-3-methylbut-2-enyl diphosphate
FT                   reductase"
FT                   /db_xref="GOA:B0BAX0"
FT                   /db_xref="InterPro:IPR003451"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAX0"
FT                   /protein_id="CAP06632.1"
FT                   /translation="MRKIILCSPRGFCAGVIRAIQTVEVALEKWGRPIYVKHEIVHNRH
FT                   VVDKLREKGAIFIEDLQEVPRNSRVIFSAHGVPPSLREEATERGLIAIDATCGLVTKVH
FT                   SAVKMYAKKGYHIILIGKRKHVEIIGIRGEAPDQITVVENIAEVEALPFSAQDPLFYVT
FT                   QTTLSMDDAADIVAALKARYPQIFTLPSSSICYATQNRQGALRNILPQVDFVYVIGDRQ
FT                   SSNSNRLREVAERRGVTARLVNHPDEVTEEILQYSGNIGITAGASTPEDVVQACLMKLQ
FT                   ELIPDLSIEMDLFVEEDTVFQLPKEL"
FT   misc_feature    291553..292392
FT                   /note="HMMPfam hit to PF02401, LytB protein, score
FT                   2.9e-183"
FT                   /inference="protein motif:HMMPfam:PF02401"
FT   CDS             complement(292519..294000)
FT                   /transl_table=11
FT                   /gene="copD2"
FT                   /locus_tag="CTLon_0235"
FT                   /product="conserved hypothetical protein"
FT                   /note="note that the product of this CDS has been proposed
FT                   to be a putative type III secretion system translocator"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX1"
FT                   /protein_id="CAP06633.1"
FT                   /translation="MTITVPQETLPSLQTIATGEQTETSCEEASALSNEIQLLEPGQAA
FT                   ILRSLSDLCLSVIEQTEKTLPHSKHSPSFRESCPLKYLSQQTSASSRTQESATAEQQSL
FT                   TPTPTPQKTPTQTLHNKPSTPISHKSSVQGRIQTSPQHSTPLRSIPVIISLPNTQQALT
FT                   DREPIQNSNCSPILSVTIFNKESSSSSKKDSAASREQSSSHSSSLQKNLSSPRAALLSP
FT                   MALFETTAQKETLAREGLLHEREDLSQEGDRDHHQSDQQQEEKEDLAISASFLSHSKKR
FT                   REHHFDPEYLPEEIREFALSEAQLSQLLHIRLNHLDILRICAEIMKLMLNSREQDLLER
FT                   RSTRTHFMQEAKKIADSFAKQARITKWLGIATATLGIFGGISPIIGEVGGEGLLNVIRK
FT                   ATGGWQQASSKTFFEGMGKVCSSLSELAKVSSTVYDLRANAVRTIAESYKELFRLEHDE
FT                   MLRSIEELKDHWRNMDSFLLQILQTQHDAVRSLYQ"
FT   CDS             complement(294012..295532)
FT                   /transl_table=11
FT                   /gene="copB2"
FT                   /locus_tag="CTLon_0236"
FT                   /product="putative type III secretion translocator"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX2"
FT                   /protein_id="CAP06634.1"
FT                   /translation="MSSWFAQATDVALSQTLDLPDASLAVQTEKFPYSCSISKESAPSC
FT                   IRKIFAHLASQKESAPLSFSRLQPTTPKERILFFGSSPSSQLSSTVRTTTSSPWNLFSN
FT                   SQARNSTRKLSEKLHLSSELSARDSTKPSSSEPVKPSENLLHTPEHHKESFSSLKKDNL
FT                   SPIMEEIDSFSAETESLEERLVTQKKEETVAQEQKHPLLRTSTPPSKASGESQDSSEHS
FT                   SKEDPYSQQPSHKIQRRKERAKRVVPIITPPTVGIFSLSYLLTKQGILADFSAYSAYKD
FT                   NLETTQQELTMLHQERIEQVQKIVDKSKTMRFWDSLASIVATIIPWIEMGVAVTIIALG
FT                   GGILSWCSLFAALIMIVISLLEAFDGWRAIAKHLPGNDLEKKMRYLGYVKLALTVFSCL
FT                   LSLSALYVAKLGMSPLLEGVVKSIAPALSGMLGLTQGVALYLQSSSQKIRARCTQIDAR
FT                   IELINWERDEYFLRAEQLLDSMQTSFEQLTETLQLQREIDQTFTDALR"
FT   misc_feature    complement(order(294210..294269,294312..294380,
FT                   294441..294509,294519..294587))
FT                   /note="4 probable transmembrane helices predicted for
FT                   CTL0236 by TMHMM2.0 at aa 316-338, 342-364, 385-407 and
FT                   422-441"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(295560..296156)
FT                   /transl_table=11
FT                   /gene="lcrH"
FT                   /gene_synonym="scc3"
FT                   /locus_tag="CTLon_0237"
FT                   /product="type III secretion chaperone"
FT                   /db_xref="GOA:B0BAX3"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX3"
FT                   /protein_id="CAP06635.1"
FT                   /translation="MPPSKIQCLETFERTYGHLYLQHASLMRHLAYLLDKIARSYPHMC
FT                   PLPDNMEAYFENYIPNKDIPLDTYQKIFKLSSEDLEQVYKEGYNAYLQGDYEESSTAFY
FT                   WLIFFNPFVSKFWFSLGASLHMRQKYQQALHAYGVAALLREKDPYPHYYAYICYTLLNN
FT                   PEEAEKALDLAWQKVKTSSAYSSLKEEILAIKSYA"
FT   misc_feature    complement(295716..295817)
FT                   /note="HMMPfam hit to PF07720, Tetratricopeptide
FT                   repeat,score 1.5e-08"
FT                   /inference="protein motif:HMMPfam:PF07720"
FT   CDS             complement(296078..297526)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0238"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX4"
FT                   /protein_id="CAP06636.1"
FT                   /translation="MDTPTPLSSVPTNASLKGEPGSSSQFSSAEKGVLKTSIGDVVLSQ
FT                   SIEDGGNETQISLVGVVNINMAQEELPALVSPRTFIFLPPETVELEIQIAEMFQALEET
FT                   PSSDSRSLQQKETSAQTPPAPSGKVSIFSLQAQGSSQTRSLPSSQESLSPQQPARAIQG
FT                   LNTPFSPAARCTIRAVPLSIVPHRRANPTSSQSVSHHSSRTYQTGHSTGTAQLSSQEWE
FT                   FSSQTVKTCSTGREKRDGQQERHSDQEQNSDHSYQEEDLSDDMQVSSSKRSSHPEDENT
FT                   EEVFSVSHFAYHAAPHPSSNLDQESNQSTFQKRPPSPMSLFSSQNATEEAPKEARVENV
FT                   FLRFMRLMARILGQAEAEAHELYLRVKERTDSVDALTLLLSKINNEKGAIDWNQDEEMR
FT                   ALVDQAKKLGVPIGDSYDWSEEGKKLLKENIQMRKENMEKITQLERTDMQRHLQEVSQC
FT                   HQARSNVLKLLKELMDTFIYNMRP"
FT   tRNA            297895..297976
FT                   /gene="tRNA-Leu"
FT                   /product="transfer RNA-Leu"
FT                   /anticodon=(pos:297929..297931,aa:Leu)
FT                   /note="tRNA Leu anticodon TAG, Cove score 52.78"
FT   CDS             complement(298387..299289)
FT                   /transl_table=11
FT                   /gene="xerD"
FT                   /locus_tag="CTLon_0239"
FT                   /product="integrase/recombinase"
FT                   /db_xref="GOA:B0BAX5"
FT                   /db_xref="InterPro:IPR013762"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX5"
FT                   /protein_id="CAP06637.1"
FT                   /translation="MTPSALFHKRLIEQFTIFLSVDRGISPLSVQAYCQDVLLFLQRAS
FT                   IEATDRINQESVFLFVEKCHKAKESETTLARRLIALKVFFHFLKDVKMLDQQPFIEHPK
FT                   IWKRLPSILSTEEVNSLLDQPLNIPNLDTHIASRDAAILYTFYATGIRVSELCDLCIGD
FT                   ISDDFIRVTGKGRKTRLVPISIKAKQAIDAYLSSFRDELQKKNPSEEHVFLSIRGKKLD
FT                   RSCVWKRITFYAKLVTTKRISPHSLRHAFATHLLNNHADLRIIQEMLGHSRISSTEIYT
FT                   HVASESLIEKFHTYHPRDI"
FT   misc_feature    complement(298420..298914)
FT                   /note="HMMPfam hit to PF00589, Phage integrase family,score
FT                   1.9e-39"
FT                   /inference="protein motif:HMMPfam:PF00589"
FT   misc_feature    complement(299014..299256)
FT                   /note="HMMPfam hit to PF02899, Phage integrase, N-terminal
FT                   SAM-like, score 1.1e-24"
FT                   /inference="protein motif:HMMPfam:PF02899"
FT   CDS             299537..300526
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0240"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX6"
FT                   /protein_id="CAP06638.1"
FT                   /translation="MIKIAQSFKPYIMEPGAKIPIPGSTLYAQVFPSLWRIFSSSHELV
FT                   NEGRVPIQGPLQRFAVFQNLNRGGVAVMTEQYKYYLSPNGCYTRSIADLPSASFYSGEY
FT                   VSFGVHKHADLEKIRRRKDLKEILPFLFRHGALLQNQPNLSMEKTEVALLLDTLDAAIA
FT                   EPNKERVFSLLERFVYAGLSKTLLPRLYDEEYQGIVSEDPRPGNEAVPFSLLRAAALSM
FT                   RRIFIQESDGVVTLLPALPPEFPCGRWIGLYFENIGEISFEWSKKTIRRVILKAHVSRE
FT                   LAIISPGVHSSRFRVEEQGRIISCKIKNLLEKVEIKAGTTYLWDRFCK"
FT   CDS             300541..302757
FT                   /transl_table=11
FT                   /gene="glgB"
FT                   /locus_tag="CTLon_0241"
FT                   /product="1,4-alpha-glucan branching enzyme"
FT                   /db_xref="GOA:B0BAX7"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0BAX7"
FT                   /protein_id="CAP06639.1"
FT                   /translation="MDPFFLNTQHVELLVSGKQSSPQDLLGIVSESLNQDRIVLFRPGA
FT                   ETVFVELRGKIQQAESHHSGIFSLPVMKGISPQDYRVYHQNGLLAHDPYAFPLLWGEID
FT                   SFLFHEGTHQRIYERMGAIPCEIDGVPGVRFIVWAPHAQRVSVIGDFNGWHGLVNPLHK
FT                   VSDQGVWELFVPGLTAGACYKWEMVTESGQVLIKSDPYGKFFGPPPRSVSVVIDDSYEW
FT                   NDSEWLEERIKKTEGPMNIYEVHVGSWQWQEGQPLNYKELADQLALYCKQMHYTHVELL
FT                   PVTEHPLNESWGYQTTGYYAPTSRYGSFEDLQYFIDTMHQHGIGVILDWVPGHFPIDSF
FT                   AMSGFDGTPLYEYTRNPSPLHPHWHTYTFDYAKPEVCNFLLGSALFWIDKMHVDGIRVD
FT                   AVSSMLYLDYGRYAGEWVPNRYGGRENLDAIRFLQQFNTVIHEKYPGVLTFAEESTTFP
FT                   KITVSVEEGGLGFDYKWNMGWMHDTLHYFEKDFPYRPYHQSDLTFPQWYAFSERFLLPF
FT                   SHDEVVHGKRSLIGKMPGDAWRQFAQLRLLLGYQICQPGKKLLFMGGEFGQGREWSPGR
FT                   ELDWELLDISYHQGVHLCSQELNALYVQSPQLWQADHLPSSFRWVDFSDVRNGVVAYLR
FT                   FADADAKKALLCVHHFGVGYFPHYLLPILPLESCDLLMNTDDTRFGGSGKGFREPEILT
FT                   PEIARQEREAAGLIEADDESGPDCWGLDIELPPSATLIFSVTLQ"
FT   misc_feature    300895..301146
FT                   /note="HMMPfam hit to PF02922, Isoamylase N-terminal
FT                   domain, score 1.3e-33"
FT                   /inference="protein motif:HMMPfam:PF02922"
FT   misc_feature    301267..302316
FT                   /note="HMMPfam hit to PF00128, Alpha amylase, catalytic
FT                   domain, score 8.5e-09"
FT                   /inference="protein motif:HMMPfam:PF00128"
FT   CDS             complement(302768..303787)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0242"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX8"
FT                   /protein_id="CAP06640.1"
FT                   /translation="MEPIHNPPPQTCSYSRSSTTYTSFKDASCDTKVIRIIIALFLIVI
FT                   SCGLILCAYTFRDLLDADYLAQEGPQQATKLLQQLDDVLTGPPLPIWDNEHLFQFSCLM
FT                   QNKHKRVLPIDICNPLTKFNFLECICNCLMTKQSVNVNETDMCELFCPPTCTPENYRRL
FT                   LCTSSVFPFVMWHDPSADTQEAMLTKMDQTMSSGRVGNSHWVLVIVDIEYRCVTFFDSL
FT                   CDYVASPQQMREQLEGLAVSLGAIYPKEGGADSDQEELLSPFQVRIGSTVKVQSPGEFT
FT                   CGAWCCQFLAWYLENPDFDLEEKVPKNPSERRALLADFISTTEQAMSRYSSLSWPTTD"
FT   misc_feature    complement(303623..303691)
FT                   /note="1 probable transmembrane helix predicted for CTL0246
FT                   by TMHMM2.0 at aa 33-55"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(304014..305225)
FT                   /transl_table=11
FT                   /locus_tag="CTLon_0243"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAX9"
FT                   /protein_id="CAP06641.1"
FT                   /translation="MLSPTNSTSKTAPVPPRDSSKPVLISEEPRNQLLQKVARTALAVL
FT                   LVVVTLGLILLFYSFSDLQSFPWCCQTHPSTKEQPTISIPVPLPSPPLAVPRPSTPPAP
FT                   TPAISRPSTPSAPKPSTPPPLLPKAPKPVKTQENLFPLVPEQVFVEMYEDMARRRIIEA
FT                   LVPAWDSDIIFKCLCYFHTLYPGLIPLETFPPATIFNFKQKIISILEDKKAVLRGEPIK
FT                   GSLPICCSKENYRRHLQGTTLLPMFMWYHPTPKTLADTMQTMKQLAIKGSVGASHWLLV
FT                   IVDIQARRLVYFDSLYNYVMPPEDMKKDLQSLAQQLDQVYPARNGQKFSVKIAAKEVIQ
FT                   KDSGFSCGAWCCQFLYWYLRDPFTDALNDLPVDSVERHENLASFVQACEAAVQDLPELS
FT                   WPEA"
FT   misc_feature    complement(305046..305105)
FT                   /note="1 probable transmembrane helix predicted for CTL0247
FT                   by TMHMM2.0 at aa 41-60"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS             complement(305402..308299)
FT                   /transl_table=11
FT                   /gene="pmpE"
FT                   /locus_tag="CTLon_0244"
FT                   /product="polymorphic outer membrane protein"
FT                   /db_xref="GOA:B0BAY0"
FT                   /db_xref="InterPro:IPR011427"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAY0"
FT                   /protein_id="CAP06642.1"
FT                   /translation="MKKAFFFFLIGSSLSGLAREVPSRIFLMPNSVPDPTKESLSNKIS
FT                   LTGDTHNLTNCYLDNLRYILAILQKTPNEGAAVTITDYLSFFDTQKEGIYFAKNLTPES
FT                   GGAIGYASPNSPTVEIRDTIGPVIFENNTCCRPFTSSNPNAAVNKIREGGAIHAQNLYI
FT                   NHNHDVVGFMKNFSYVRGGAISTANTFVVSENQSCFLFMDNICIQTNTAGKGGAIYAGT
FT                   SNSFESNNCDLFFINNACCAGGAIFSPICSLTGNRGNIVFYNNRCFKNVETASSESSDG
FT                   GAIKVTTRLDVTGNRGRIFFSDNITKNYGGAIYAPVVTLVDNGPTYFINNIANNKGGAI
FT                   YIDGTSNSKISADRHAIIFNENIVTNVTNANGTSTSANPPRRNAITVASSSGEILLGAG
FT                   SSQNLIFYDPIEVSNAGVSVSFNKEADQTGSVVFSGATVNSADFHQRNLQTKTPAPLTL
FT                   SNGFLCIEDHAQLTVNRFTQTGGVVSLGNGAVLSCYKNGAGNSASNASITLKHIGLNLS
FT                   SILKSGAEIPLLWVEPTNNSNNYTADTAATFSLSDVKLSLIDDYGNSPYESTDLTHALS
FT                   SQPMLSISEASDNQLRSDDMDFSGLNVPHYGWQGLWSWGWAKTQDPEPASSATITDPKK
FT                   ANRFHRTLLLTWLPAGYVPSPKHRSPLIANTLWGNMLLATESLKNSAELTPSDHPFWGI
FT                   TGGGLGMMVYQDPRENHPGFHMRSSGYSAGMIAGQTHTFSLKFSQTYTKLNERYAKNNV
FT                   SSKNYSCQGEMLFSLQEGFLLAKLVGLYSYGDHNCHHFYTQGENLTSQGTFRSQTMGGA
FT                   VFFDLPMKPFGSTHILTAPFLGALGIYSSLSHFTEVGAYPRSFSTKTPLINVLVPIGVK
FT                   GSFMNATQRPQAWTVELAYQPVLYRQELEIATQLLASKGIWFGSGSPSSRHAMSYKISQ
FT                   QTQPLSWLTLHFQYHGFYSSSTFCNYLNGEIALRF"
FT   misc_feature    complement(305444..306238)
FT                   /note="HMMPfam hit to PF03797, Autotransporter
FT                   beta-domain,score 1.7e-38"
FT                   /inference="protein motif:HMMPfam:PF03797"
FT   misc_feature    complement(306353..306919)
FT                   /note="HMMPfam hit to PF07548, Chlamydia polymorphic
FT                   membrane protei, score 3.7e-51"
FT                   /inference="protein motif:HMMPfam:PF07548"
FT   misc_feature    complement(307226..307276)
FT                   /note="PS00237 G-protein coupled receptors signature."
FT                   /inference="protein motif:Prosite:PS00237"
FT   misc_feature    complement(307271..307327)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.07"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(307352..307408)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 1"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(307439..307525)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.79"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(307553..307606)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 3.7"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(307637..307690)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 2.2"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(307739..307822)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 12"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(307823..307924)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 1"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(307967..308023)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 9.6"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   sig_peptide     complement(308246..308299)
FT                   /gene="pmpE"
FT                   /locus_tag="CTLon_0244"
FT                   /note="Signal peptide predicted for CTL0248 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.997) with cleavage site
FT                   probability 0.973 between residues 18 and 19"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             complement(308302..311400)
FT                   /transl_table=11
FT                   /gene="pmpF"
FT                   /locus_tag="CTLon_0245"
FT                   /product="polymorphic outer membrane protein"
FT                   /db_xref="GOA:B0BAY1"
FT                   /db_xref="InterPro:IPR011427"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAY1"
FT                   /protein_id="CAP06643.1"
FT                   /translation="MIKRTSLSFACLSFFYLSTISILQANETDTLQFRRFTFSDREIQF
FT                   VLDPVSLITAQNVTFSNINSWGRGVCTIADNTQTQIFSNSINTTSAAGGVFDMVTISFT
FT                   ASNNANLLFCNNYCTHNKGGGAIRSKGPIRFSNNQDVLFYNNTTAGAQYTGTGNKSEKN
FT                   RGGALYAKNITLTGNRTLAFINNMSGDCGGAIAANTQISITDTAKGVLFENNHTLNHIP
FT                   DTRAENMARGGAICSRKSSCSISNNLGPIIFNYNQGGKGGAISATQCVISNNEERIVFS
FT                   NNSSIGWNKSTHASNGGAIQTAQGFTLQNNKGPIYFDSNTAAHAGGAIDCGYIDIRNNG
FT                   PIYFLNNSAAWGAAFNLSKLRPATNYIHTGTGDIVFNNNVVFKFDANLLGMRKLFHINN
FT                   NTQTPYTLSLGAKEDTRIYFYDLFQWERVREPNNAQVSPSSRNVITINPIEEFSGAVVF
FT                   SYKQMSSDIKTLMGTEHNYIREAPTTLKFGTLAIEDGAELEFFDIPFTQNPTSLLALGS
FT                   GATLTVGKHGKLNITNLGVILPIILKEGKSPPCIRVNPQDMTQNTDTGQTPSSTSSIST
FT                   PMIIFNGRLSIVDENYESVYDSMDLSRGKAEQPILSIETTNDGQLGPNWQNSLNTSLLS
FT                   PPHYGYQGLWTPNWITTTYTITLNNNSSAPTSANSIAEQKKTSETFTPNSTTTAGIPSI
FT                   KASAGSGSGSSTTTDVQVTRHTLTVNWTPVGYIVDPIRRGDLIANSLVHSGRNMTMGLR
FT                   SLLPDNSWFALQGAATTLFTKQQKRLSYHGYSSASKGYTVSSQASGAHGHKFLLSFSQS
FT                   SDKMKEKETNNRLSSRYYLSALCFAHPMFDRIALIGAAACNYGTHNMRSFYGTKRSSKG
FT                   KFHSTTLGASLRCELRDSMPLRSIMLTPFAQALFSRTKPGAIRESGDLARLFTLEQAHT
FT                   AIVSPIGIKGAYSSDTWPTLSWEMELAYQPTLYWKRPLLNTLLIQNNGSWVTTNTPLAK
FT                   HSFYGRGSHSLKFSHLKLFANYQAEVATSTVSHYINAGGALVF"
FT   misc_feature    complement(308329..309135)
FT                   /note="HMMPfam hit to PF03797, Autotransporter
FT                   beta-domain,score 5.2e-41"
FT                   /inference="protein motif:HMMPfam:PF03797"
FT   misc_feature    complement(309415..309939)
FT                   /note="HMMPfam hit to PF07548, Chlamydia polymorphic
FT                   membrane protei, score 3.1e-53"
FT                   /inference="protein motif:HMMPfam:PF07548"
FT   misc_feature    complement(310327..310380)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 5.8"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(310405..310461)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 5.5"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(310492..310572)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.19"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(310600..310653)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.15"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(310687..310776)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 4.8"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(310807..310863)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 7.7"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(310888..310983)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.27"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    complement(311011..311073)
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 2.2"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   sig_peptide     complement(311326..311400)
FT                   /gene="pmpF"
FT                   /locus_tag="CTLon_0245"
FT                   /note="Signal peptide predicted for CTL0249 by SignalP 2.0
FT                   HMM (Signal peptide probability 1.000) with cleavage site
FT                   probability 0.964 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS             311565..314606
FT                   /transl_table=11
FT                   /gene="pmpG"
FT                   /locus_tag="CTLon_0246"
FT                   /product="polymorphic outer membrane protein"
FT                   /db_xref="GOA:B0BAY2"
FT                   /db_xref="InterPro:IPR011427"
FT                   /db_xref="UniProtKB/TrEMBL:B0BAY2"
FT                   /protein_id="CAP06644.1"
FT                   /translation="MQTSFHKFFLSMILAYSCCSLNGGGYAAEIMVPQGIYDGETLTVS
FT                   FPYTVIGDPSGTTVFSAGELTLKNLDNSIAALPLSCFGNLLGSFTVLGRGHSLTFENIR
FT                   TSTNGAALSNSAADGLFTIEGFKELSFSNCNSLLAVLPAATTNKGSQTPTTTSTPSNGT
FT                   IYSKTDLLLLNNEKFSFYSNLVSGDGGAIDAKSLTVQGISKLCVFQENTAQADGGACQV
FT                   VTSFSAMANEAPIAFVANVAGVRGGGIAAVQDGQQGVSSSTSTEDPVVSFSRNTAVEFD
FT                   GNVARVGGGIYSYGNVAFLNNGKTLFLNNVASPVYIAAKQPTNGQASNTSNNYGDGGAI
FT                   FCKNGAQAAGSNNSGSVSFDGEGVVFFSSNVAAGKGGAIYAKKLSVANCGPVQFLRNIA
FT                   NDGGAIYLGESGELSLSADYGDIIFDGNLKRTAKENAADVNGVTVSSQAISMGSGGKIT
FT                   TLRAKAGHQILFNDPIEMANGNNQPAQSSKLLKINDGEGYTGDIVFANGSSTLYQNVTI
FT                   EQGRIVLREKAKLSVNSLSQTGGSLYMEAGSTLDFVTPQPPQQPPAANQLITLSNLHLS
FT                   LSSLLANNAVTNPPTNPPAQDSHPAVIGSTTAGSVTISGPIFFEDLDDTAYDRYDWLGS
FT                   NQKINVLKLQLGTKPPANAPSDLTLGNEMPKYGYQGSWKLAWDPNTANNGPYTLKATWT
FT                   KTGYNPGPERVASLVPNSLWGSILDIRSAHSAIQASVDGRSYCRGLWVSGVSNFFYHDR
FT                   DALGQGYRYISGGYSLGANSYFGSSMFGLAFTEVFGRSKDYVVCRSNHHACIGSVYLST
FT                   QQALCGSYLFGDAFIRASYGFGNQHMKTSYTFAEESDVRWDNNCLAGEIGAGLPIVITP
FT                   SKLYLNELRPFVQAEFSYADHESFTEEGDQARAFKSGHLLNLSVPVGVKFDRCSSTHPN
FT                   KYSFMAAYICDAYRTISGTETTLLSHQETWTTDAFHLARHGVVVRGSMYASLTSNIEVY
FT                   GHGRYEYRDASRGYGLSAGSRVRF"
FT   sig_peptide     311565..311645
FT                   /gene="pmpG"
FT                   /locus_tag="CTLon_0246"
FT                   /note="Signal peptide predicted for CTL0250 by SignalP 2.0
FT                   HMM (Signal peptide probability 0.992) with cleavage site
FT                   probability 0.925 between residues 27 and 28"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    311586..311618
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:Prosite:PS00013"
FT   misc_feature    311853..311909
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.87"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    312093..312149
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 1.6"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    312177..312233
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 9.6"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    312264..312320
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 13"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    312393..312446
FT                   /note="HMMPfam hit to PF02415, Chlamydia polymorphic
FT                   membrane protei, score 0.16"
FT                   /inference="protein motif:HMMPfam:PF02415"
FT   misc_feature    312456..312479
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:Prosite:PS00017"
FT