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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM287259; SV 1; linear; mRNA; STD; VRT; 1221 BP.
XX
AC   AM287259;
XX
DT   13-AUG-2006 (Rel. 88, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Danio rerio partial mRNA for alpha 2,6-sialyltransferase ST6GalNAc I (siat
DE   3 gene)
XX
KW   alpha 2,6-sialyltransferase ST6GalNAc I; siat 3 gene.
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-1221
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (13-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite de Lille 1, UGSF, UMR CNRS USTL no8576,
RL   Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Mollicone R., Delannoy P., Oriol R.;
RT   "The animal sialyltransferase and sialyltransferase-related genes";
RL   Unpublished.
XX
DR   Ensembl-Gn; ENSDARG00000043814; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000064334; Danio_rerio.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1221
FT                   /organism="Danio rerio"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7955"
FT   CDS             <1..>1218
FT                   /codon_start=1
FT                   /gene="siat 3"
FT                   /product="alpha 2,6-sialyltransferase ST6GalNAc I"
FT                   /db_xref="GOA:Q0P7H8"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:Q0P7H8"
FT                   /protein_id="CAL18607.1"
FT                   /translation="MQKAWGVVSLILTFCVLLYLVLWNNLSENIHSKTIIISSLILSPL
FT                   GNTNLFKTQKHLNVERKVNITPIPVLYKKNFTKLPVWDFEDVYLRDSNARKPTCPKSLH
FT                   NTEDPEFKESVLPDIQLWLYKGQLNMSEWNRLAHFNNPFGFMEYNYNEIKRAVDLIPKP
FT                   RSSILLPVPKGSKDGCIRCAVVGAGGILNNSKMGREIDSHDYVFRVNGAVTKGYEEDVG
FT                   NRTSVYVHTAFSLYATILTLKKYGFHNIPQDEGIKYVMIPEGLRDFEWLQGLLQGKAAN
FT                   GSFKGVRPLNFFNGHFNESRFNVLHPDFLRYIRNRFMPSKQMQGNYWAMYRPTNGAFAL
FT                   FLAIHTCDMVNAYGFITEDHHKYSNYYYEKFKKTSVIFYINHDYGLEIKTWKKLHDSGI
FT                   IRLFQRH"
XX
SQ   Sequence 1221 BP; 372 A; 254 C; 254 G; 341 T; 0 other;
     atgcagaagg cttggggtgt tgttagtctc atactgactt tttgtgtgtt gctctatctg        60
     gtgctttgga ataatctttc agaaaacatt cacagcaaaa ctatcatcat ttcttcattg       120
     attttgtcgc cacttggaaa taccaatttg ttcaaaaccc aaaaacactt gaatgtggag       180
     cgaaaggtca acataacccc cattccggtt ctttataaga aaaacttcac caaactgcca       240
     gtgtgggact ttgaagatgt ctatttgcga gacagtaatg caagaaaacc gacctgtcca       300
     aagtctcttc acaacacaga ggacccggag ttcaaggaat cagttcttcc tgacattcag       360
     ctgtggctgt acaaaggtca actcaacatg tcagaatgga atcgattagc acactttaac       420
     aatccctttg gcttcatgga gtacaattac aatgaaataa aaagagcagt ggatttgatc       480
     ccaaagccca ggtcttcgat attactgcct gtacctaaag gctcaaagga tggctgtatc       540
     cgctgtgctg ttgtgggcgc tgggggcatt ctcaataact caaagatggg cagagagata       600
     gactctcatg actatgtttt ccgagtaaac ggtgctgtta ctaaaggtta cgaggaggat       660
     gtcggaaaca gaacatcagt ctatgtgcat acagcatttt ccttatatgc cactatactg       720
     acgttaaaaa aatatggctt tcacaatatt ccacaagacg agggtatcaa atatgtcatg       780
     attcctgaag gcctgaggga ctttgagtgg cttcaaggcc ttttacaggg aaaagcagcc       840
     aatgggtcat tcaaaggtgt gagaccactg aattttttca atgggcattt caacgagagc       900
     agatttaacg ttctacaccc cgatttcctt cgttacattc gcaacagatt catgccatct       960
     aaacagatgc agggcaatta ctgggcaatg taccgcccga ccaatggagc atttgccttg      1020
     tttttggcta ttcacacatg tgatatggtg aatgcctatg gatttatcac tgaagaccat      1080
     cataaatact ccaactatta ttatgagaag ttcaagaaaa ccagtgtcat tttctatatt      1140
     aaccatgact atgggctgga gattaagaca tggaagaaac tacacgactc tggaatcatc      1200
     agactctttc aaagacactg a                                                1221
//
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