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EBI DbfetchID AM236086; SV 1; circular; genomic DNA; STD; PRO; 870021 BP. XX AC AM236086; XX PR Project:344; XX DT 04-MAY-2006 (Rel. 87, Created) DT 13-MAY-2009 (Rel. 100, Last updated, Version 6) XX DE Rhizobium leguminosarum bv. viciae plasmid pRL12 complete genome, strain DE 3841 XX KW complete genome. XX OS Rhizobium leguminosarum bv. viciae 3841 OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; OC Rhizobium/Agrobacterium group; Rhizobium. XX RN [1] RP 1-870021 RA Crossman L.C.; RT ; RL Submitted (21-FEB-2006) to the EMBL/GenBank/DDBJ databases. RL Crossman L.C., Pathogen Sequencing Unit, The Wellcome Trust Sanger RL Institute, Hinxton, Cambridge, Cambridgeshire, CB10 1SA, UNITED KINGDOM. XX RN [2] RA Young J.W., Crossman L.C., Johnston A.W.B., Thomson N.R., Ghazoui Z.F., RA Hull K.H., Wexler M., Curson A.R.J., Todd J.D., Poole P.S., Mauchline T.H., RA East A.K., Quail M.A., Churcher C., Arrowsmith C., Cherevach A., RA Chillingworth T., Clarke K., Cronin A., Davis P., Fraser A., Hance Z., RA Hauser H., Jagels K., Moule S., Mungall K., Norbertczak H., RA Rabbinowitsch E., Sanders M., Simmonds M., Whitehead S., Parkhill J.; RT "The genome of Rhizobium leguminosarum has recognizable core and accessory RT components"; RL Genome Biol. 7:R4-R4(2006). XX DR GR; AM236086_GR. DR RFAM; RF00490; S-element. DR Sample; ERS000043. XX FH Key Location/Qualifiers FH FT source 1..870021 FT /organism="Rhizobium leguminosarum bv. viciae 3841" FT /strain="3841" FT /mol_type="genomic DNA" FT /country="United Kingdom" FT /db_xref="taxon:216596" FT CDS 1..1194 FT /transl_table=11 FT /gene="repA" FT /locus_tag="pRL120001" FT /product="putative replication protein A" FT /note="similarity:fasta; SWALL:SOPA_ECOLI (SWALL:P62556); FT Escherichia coli; SopA protein; length 388 aa; id=27.52; FT ungapped id=29.36; E()=1.2e-17; 367 aa overlap; query FT 39-394 aa; subject 31-385 aa" FT /note="similarity:fasta; SWALL:Q92XB3 (EMBL:AL591985); FT Rhizobium meliloti; probable replication protein a; repa1; FT length 398 aa; id=81.86; ungapped id=81.86; E()=3.3e-129; FT 397 aa overlap; query 1-397 aa; subject 2-398 aa" FT /db_xref="GOA:Q1M5A2" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:Q1M5A2" FT /inference="similar to sequence:UniProtKB:P62556" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11715.1" FT /translation="MQPSLALQDDQEHLPSLLATDAKELSYQLQQHQAKIFPPLSQKTI FT RTFSPAEAAAFIGIGEGYLRQVAADGHGPDPLANGRRLYSATDMDRIRRVLDERNGTPK FT YVPARRPGEKLQIISVMNFKGGSGKTTTAAHLAQFMALRGYRVLAVDLDPQASLSALFG FT HQPEFDVGEGETIYGAIRYEEPRPIADIVRATYTPNLHLIPGNLELMEFEHETPKAMAS FT GTAETMFFARIGEVLTEIESLYDVVVIDCPPQLGFLTMSALCAATSVLITVHPQMLDVM FT SMSQFLTMTSELMSVVEKAGGRTSYDWMRYLVTRFEPNDGPQSQMTGFMRAIFGNRMLH FT NAMVKSTAVADAGVTKQTLYEVERSQFTRGTYDRALESLNLVNGEIEAHIRSTWGRK" FT misc_feature 352..1053 FT /note="Pfam match to entry PF01656.8 CbiA, score FT 178.0,E-value 1.9e-50" FT /inference="protein motif:Pfam:PF01656.8" FT CDS 1199..2200 FT /transl_table=11 FT /gene="repB" FT /locus_tag="pRL120002" FT /product="putative replication protein B" FT /note="similarity:fasta; SWALL:Q7BLR3 (EMBL:AF242881); FT Agrobacterium tumefaciens; RepB; repB; length 347 aa; FT id=42.12; ungapped id=42.95; E()=1.3e-35; 311 aa overlap; FT query 22-327 aa; subject 27-336 aa" FT /note="similarity:fasta; SWALL:Q92XB4 (EMBL:AL591985); FT Rhizobium meliloti; probable replication protein b; repb1; FT length 334 aa; id=56.21; ungapped id=58.1; E()=7.7e-62; 338 FT aa overlap; query 1-332 aa; subject 1-333 aa" FT /db_xref="GOA:Q1M5A1" FT /db_xref="InterPro:IPR011111" FT /db_xref="UniProtKB/TrEMBL:Q1M5A1" FT /inference="similar to sequence:INSDC:AF242881" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11716.1" FT /translation="MARKNLIEISAPSPERMDAVAPRDNRPIAGFVPQERSAAPVGGIT FT KTLGNITEKMERASELERQLATGQTIVELDPGLIDASFVSDRLAIDAAELAQLVEQIRE FT HGQQVPILVRPHPETRGRYQVAYGHRRLAATREIGIRVRAVVRDLTDGQLVVSQGQENS FT ARTNLSYIERALFASRLEERSFGRDVIMAALGVDKAALSRMLIVIRQVPLDLVNAIGAA FT PDIGRRRWLELGERLEKADVEKIVAELSADDARKISSDERFQRALVLATKKTAAPKPAM FT AKTQVSGVPVMIKKTASGATFVFDGKTAPGFDQFVQERLKGLFQEFNKDRGA" FT misc_feature 1412..1687 FT /note="Pfam match to entry PF02195.5 ParBc, score FT 95.0,E-value 1.9e-25" FT /inference="protein motif:Pfam:PF02195.5" FT misc_feature 1688..2179 FT /note="Pfam match to entry PF07506.1 RepB, score FT 79.0,E-value 1.2e-20" FT /inference="protein motif:Pfam:PF07506.1" FT CDS 2355..3659 FT /transl_table=11 FT /gene="repC" FT /locus_tag="pRL120003" FT /product="putative replication protein C" FT /note="similarity:fasta; SWALL:Q8KY09 (EMBL:AF313446); FT Rhizobium etli; RepC; repC; length 440 aa; id=65; ungapped FT id=65.94; E()=2e-96; 420 aa overlap; query 8-426 aa; FT subject 18-432 aa" FT /db_xref="InterPro:IPR005090" FT /db_xref="UniProtKB/TrEMBL:Q1M5A0" FT /inference="similar to sequence:INSDC:AF313446" FT /protein_id="CAK11717.1" FT /translation="MESGYVTTPFGRRPMSLGMLASQQLAETIEPGMKRSKWKLFRAIC FT EARPALGVTDRALTVLDALLTFYPDDEISEEKGLIVFPSNAQLSLRARGMTSATLRRHL FT AVLVEAGLILRKDSPNGKRYARRDRAGAIGEAFGFSVAPLLARAVEIESLAAQAVADRE FT LLRVTRERLTLCRRDISKLIAAALEEGVSGDWEDISVMFRALLARIPRVATAEDLAPLL FT DEMRLLRAEVVNMLERRLKTKKIDANESQIEHHKQNSNPDSTYELEPSFETKQGEKAAA FT DNDPNAGPSDERRLKQQKPSGGMSNRAEGAADPGAGPGLKSFPLGLVLQACPSILDYGP FT GGSIGNWRDLMSAAVVVRSMLGVSPSAYEEACSGMGPENAATVIACILERGGHINSPGG FT YLRDLTRRTERGEFAIGPMLMALVRANGLTARHAS" FT misc_feature 2358..3641 FT /note="Pfam match to entry PF03428.3 RP-C, score FT 752.4,E-value 2.4e-223" FT /inference="protein motif:Pfam:PF03428.3" FT CDS 3773..4657 FT /transl_table=11 FT /locus_tag="pRL120004" FT /product="putative dihydrodipicolinate synthase" FT /note="similarity:fasta; SWALL:DAPA_PSEAE (SWALL:Q9I4W3); FT Pseudomonas aeruginosa; dihydrodipicolinate synthase; dapA; FT length 292 aa; id=27.12; ungapped id=28.15; E()=1.8e-11; FT 247 aa overlap; query 6-250 aa; subject 4-243 aa" FT /note="similarity:fasta; SWALL:Q7CWX0 (EMBL:AE008163); FT Agrobacterium tumefaciens; agr_c_4548p; length 294 aa; FT id=67.34; ungapped id=67.34; E()=5.6e-73; 294 aa overlap; FT query 1-294 aa; subject 1-294 aa" FT /db_xref="GOA:Q1M599" FT /db_xref="InterPro:IPR002220" FT /db_xref="UniProtKB/TrEMBL:Q1M599" FT /inference="similar to sequence:UniProtKB:Q9I4W3" FT /inference="similar to sequence:INSDC:AE008163" FT /protein_id="CAK11718.1" FT /translation="MTQKFGLSVALATPFDSNGDIAIEAMIEQARRSLAAGCSSVTLFG FT TTGEGSSIGTRERERVLASLLDSGIAAKQIIVGVLVDAAEDAAMQAGHALSKGARNILL FT APPSYFKNVSDDGVFQWFSAVFTILGDKARDIIVYNIPSVTMVPLSVSLIGRLRTAFPD FT IVTGVKDSSGDWPFTEALLKAHGDLVILVGDERHLAKGVRLGGQGAISGMANFVPREVK FT LMAEEGKDDSRIEDFVDELLKFPVTAAVKVMVAHLTSDEIWLAVRPPLVSISGEGQAQL FT ALVFDTLFRSKAA" FT sig_peptide 3773..3829 FT /locus_tag="pRL120004" FT /note="Signal peptide predicted for pRL120004 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.677) with cleavage FT site probability 0.543 between residues 19 and 20" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 3779..4639 FT /note="Pfam match to entry PF00701.10 DHDPS, score FT 40.9,E-value 2e-13" FT /inference="protein motif:Pfam:PF00701.10" FT CDS 4665..5342 FT /transl_table=11 FT /locus_tag="pRL120005" FT /product="putative transcriptional regulator" FT /note="similarity:fasta; SWALL:Q7CWW9 (EMBL:AE008163); FT Agrobacterium tumefaciens; agr_c_4549p; length 220 aa; FT id=79.09; ungapped id=79.45; E()=2.1e-61; 220 aa overlap; FT query 6-225 aa; subject 2-220 aa" FT /db_xref="GOA:Q1M598" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M598" FT /inference="similar to sequence:INSDC:AE008163" FT /protein_id="CAK11719.1" FT /translation="MFLGEAMDGTDEQPTLREKAYESFTRHLLARDVRPGQFVSQRRLV FT ELTGLTLGAIRELIPRLEAEGLIKTVPQRGLQIAHIDLNLIREAFQLRVFLEKEAVALF FT TRSASDETVAGLLKQHRDIADAIRNGDGSHELEVHAQAVDWGMHDAFIDALGNTIISNA FT YRVNSIKMRLISQDRFRIDGHVGPVMVEHLKVLEAIERRSAEDAVNSLVAHINHARDRA FT LRI" FT CDS 5398..6726 FT /transl_table=11 FT /locus_tag="pRL120006" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q7CWW8 (EMBL:AE008163); FT Agrobacterium tumefaciens; agr_c_4552p; length 443 aa; FT id=85; ungapped id=85; E()=1.6e-148; 440 aa overlap; query FT 3-442 aa; subject 4-443 aa" FT /db_xref="GOA:Q1M597" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q1M597" FT /inference="similar to sequence:INSDC:AE008163" FT /protein_id="CAK11720.1" FT /translation="MSSFLNPTRRGFLAGTAAFGASNMLGVRLASAAVDWKRFAGTTLE FT VNLVKSPRSEILLKYLSEFEELTGIKVNAEATPEQQQRQKTTIELSSGKPSFDVVHMSY FT HVQKRQFEKGGWLADIGGFLKDPSLTDPSLVESDFAEAGLTFAKDPGGVLRSLPFSVDY FT WIIYWNKALFEKKGLAYPTTFEELASAAEALTDPSTNTYGFVARGLKNANTPVWTSLLL FT GYGSSPLGPDGKLRTTSQEAIDAAKLYQRLMTKTAPPGVSGFNWAEAQSAFLQGKIGMW FT LDGVGFAPPIENPEKSRVVGQVGYGIMPKGPKAQAAGTFGDGLGVVAASQKKEAGYLFC FT QWAISHEMGARLLQAGAGVPFRQSVLEDAKVREGVKMPGAWLDAVVGSGKISQLALPVI FT IPVTEFRDVYGVGLTNMIGGADPETELKAATAQFEPVLAKSEG" FT sig_peptide 5398..5493 FT /locus_tag="pRL120006" FT /note="Signal peptide predicted for pRL120006 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.995) with cleavage FT site probability 0.818 between residues 32 and 33" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 5425..6447 FT /note="Pfam match to entry PF01547.11 SBP_bac_1, score FT 59.8, E-value 7.7e-15" FT /inference="protein motif:Pfam:PF01547.11" FT CDS 6726..7664 FT /transl_table=11 FT /locus_tag="pRL120007" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q7CWW7 (EMBL:AE008163); FT Agrobacterium tumefaciens; agr_c_4553p; length 312 aa; FT id=82.58; ungapped id=82.58; E()=4.7e-105; 310 aa overlap; FT query 1-310 aa; subject 1-310 aa" FT /db_xref="GOA:Q1M596" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M596" FT /inference="similar to sequence:INSDC:AE008163" FT /protein_id="CAK11721.1" FT /translation="MASTSIETAAVAKTSKGRSKPDRFAPNYWPFVIPALIVIAAVIVF FT PWVFTLWMSVNSWTLGQSQVFAGLDNYARLVVDMRFWDSLWHTVLYTTLSVVVPLFLGT FT LAALIFDAQFPLRGLIRGIFVMPMMATPVAIALVWTMMYHPQLGVLNYLLSFIGIGPQE FT WIYNQSSVIPSLVLVETWQWTPLIMLIVLGGLAAVPREPYESAEIDGANVWQKFRYLTL FT PMIAPFLMIAVIIRSIDAVKSFDIIYAMTQGGPGTASETINIYLYNTAFAYYDIGYGSA FT MAVVFFILIVLLSFVLMMLRQRVNWSDGEAR" FT misc_feature order(6807..6875,6987..7055,7089..7157,7266..7319, FT 7380..7439,7551..7619) FT /locus_tag="pRL120007" FT /note="6 probable transmembrane helices predicted at aa FT 28-50, 88-110, 122-144,181-198, 219-238 and 276-298" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 6966..7643 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 55.9, E-value 1.1e-13" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 7664..8479 FT /transl_table=11 FT /locus_tag="pRL120008" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q7CWW6 (EMBL:AE008163); FT Agrobacterium tumefaciens; agr_c_4555p; length 286 aa; FT id=91.51; ungapped id=91.51; E()=1.4e-98; 271 aa overlap; FT query 1-271 aa; subject 14-284 aa" FT /db_xref="GOA:Q1M595" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M595" FT /inference="similar to sequence:INSDC:AE008163" FT /protein_id="CAK11722.1" FT /translation="MKRKTLDRIGLLFVALVMISPVVLFFLWMISLSLKYEIDNGAYPP FT IFIPERFAWSNYLKVFQENNFFLYLWNSVLVTGAATLLALLIGVPAGYGIARLKAEKSA FT MVIMIARMTPGLSFLIPLFLLFQWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPM FT ELEEAASIDGATPWQVFRLVALPIARPGIVVAFILSVIFSWNNFVFGIVLASRETRTLP FT VAVYNMLSFEQVSWGPLAAAALIVTLPVLILTVFAQRQIVAGLTAGAVK" FT sig_peptide 7664..7768 FT /locus_tag="pRL120008" FT /note="Signal peptide predicted for pRL120008 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.949) with cleavage FT site probability 0.737 between residues 35 and 36" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature order(7688..7756,7880..7948,7982..8050,8078..8137, FT 8237..8305,8363..8431) FT /locus_tag="pRL120008" FT /note="6 probable transmembrane helices predicted at aa FT 9-31, 73-95, 107-129, 139-158,192-214 and 234-256" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 7871..8464 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 60.2, E-value 5.7e-15" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 8498..9472 FT /transl_table=11 FT /gene="rbsK" FT /locus_tag="pRL120009" FT /product="putative ribokinase" FT /EC_number="2.7.1.15" FT /note="similarity:fasta; SWALL:RBSK_ECOLI (SWALL:P05054); FT Escherichia coli, and Escherichia coli O157:H7; ribokinase; FT rbsK; length 309 aa; id=27.56; ungapped id=30.17; FT E()=6.1e-11; 312 aa overlap; query 17-313 aa; subject 7-306 FT aa" FT /note="similarity:fasta; SWALL:Q7CWW4 (EMBL:AE008163); FT Agrobacterium tumefaciens; agr_c_4560p; length 319 aa; FT id=61.51; ungapped id=61.71; E()=1.1e-64; 304 aa overlap; FT query 11-314 aa; subject 5-307 aa" FT /db_xref="GOA:Q1M594" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q1M594" FT /inference="similar to sequence:UniProtKB:P05054" FT /inference="similar to sequence:INSDC:AE008163" FT /protein_id="CAK11723.1" FT /translation="MTTSAAFGPPPGRERRVLCVGAAVMDTLFRVRTLPTGQGKILPYD FT MLQIAEGMASSAAFAVVRLGGDASLWGAVGNDAIGERIVADLSESGIDTSGMLRVEGAR FT SAISTILVDDQGERLIVPFYDAGLHETVKPVTEQDASAFDAVLVDVRWPKLALRTLLAA FT REAGKPAILDGDVAGDGVIEMLAPAASHIVFSQPAAERLAGAAELVKVVGLLKRKFEHA FT FISVTAGENGSFWFDDLTGDVFRLAAPKVRAVDTLAAGDVFHGAFALAVAEGLPIEETM FT RFSSMAAALKCQVFGGRIGAPTRAEVWDALRDWDVPMTKMRDR" FT misc_feature 8543..9409 FT /note="Pfam match to entry PF00294.10 PfkB, score FT 143.1,E-value 6.2e-40" FT /inference="protein motif:Pfam:PF00294.10" FT CDS 9849..10043 FT /transl_table=11 FT /locus_tag="pRL120010" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q1M593" FT /protein_id="CAK11724.1" FT /translation="MPYGRGNRGGGHKLEGFGRTDDGLRMLGEQIEEAIFPRHQFSETS FT SASALHRVSQNCHKARRCP" FT CDS 10264..11613 FT /transl_table=11 FT /locus_tag="pRL120011" FT /product="putative substrate-binding periplasmic protein FT precursor" FT /note="similarity:fasta; SWALL:UGPB_ECOLI (SWALL:P10904); FT Escherichia coli, and Escherichia coli O157:H7; FT glycerol-3-phosphate-binding periplasmic protein precursor; FT ugpB; length 438 aa; id=46.81; ungapped id=47.46; FT E()=3.9e-79; 440 aa overlap; query 10-448 aa; subject 1-435 FT aa" FT /note="similarity:fasta; SWALL:Q6G5J2 (EMBL:BX897699); FT Bartonella henselae; glycerol-3-phosphate-binding FT periplasmic protein UgpB; ugpB; length 441 aa; id=53.96; FT ungapped id=54.21; E()=1.8e-100; 441 aa overlap; query FT 10-449 aa; subject 1-440 aa" FT /db_xref="GOA:Q1M592" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q1M592" FT /inference="similar to sequence:UniProtKB:P10904" FT /inference="similar to sequence:INSDC:BX897699" FT /protein_id="CAK11725.1" FT /translation="MNRQQVGVRMNKIAFFLSAGLTSLSLSVPAMAATKIQWWHAMGGE FT NGAKLEQIAKGFNASQSDYEIVPVFKGTYDETLTGAIAAFRANQQPAIVQVYEVGTGTM FT MAAQGAVYPVYQLMKDEGEAWDQSKFIAPVVGYYSDTSGNVLSLPFNSSTPIMYYNKDV FT FKKAGLDPETPPKTWADVEAFSRTIMKSGAAKCGFTSAWISWIQTENLNALHDKPYSTK FT ANGFGGLDAEFTFNNDLTIRHWGNLKKWQDEGLFKFGGPGGGDNAPPMFYSQECAMYMN FT SSAGRAGVINNAKAFKVGFAPLPYYDDVIPQPLNSIIGGATLWTLKGRPEEEYKGVAKF FT FTYLQKPEVQADWHQFSGYLPITEAAYKLGQDQGYYEKNPGADIGIKQLTRVTPTDNSK FT GIRFGNYVQVRGIIDDEFAALLGGKKTAKEAVDSVVARGNEQLRDFQSAN" FT sig_peptide 10264..10359 FT /locus_tag="pRL120011" FT /note="Signal peptide predicted for pRL120011 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.999 between residues 32 and 33" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 10300..10359 FT /locus_tag="pRL120011" FT /note="1 probable transmembrane helix predicted at aa FT 13-32" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 10321..11316 FT /note="Pfam match to entry PF01547.11 SBP_bac_1, score FT 69.5, E-value 8.6e-18" FT /inference="protein motif:Pfam:PF01547.11" FT CDS 11679..12563 FT /transl_table=11 FT /locus_tag="pRL120012" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q92WD8 (EMBL:AL591985); FT Rhizobium meliloti; probable glycerol-3-phosphate ABC FT transporter permease protein; ugpA; length 293 aa; FT id=63.91; ungapped id=63.91; E()=1.5e-77; 291 aa overlap; FT query 4-294 aa; subject 2-292 aa" FT /db_xref="GOA:Q1M591" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M591" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11726.1" FT /translation="MQTKRTVFPNKLLPYLLIAPQIFVTVVFFLWPAATAFWQSFLRQD FT AFGFKTNFVWFENYRRLFADPIYINAFGHTLVFAILVTVLSTAIALLLAAAAMRVLRIS FT RIYSTLLIWPYAVAPAIAGILWWFMFNPSIGIVAYMLRAMGINWNHLINPDHAMALIVI FT AATWKQISYNFLFFLAALQSVPRSLQEAGAIDGAGPMKRFWTIVFPLISPTTFYLIVIN FT IVYAMFDTFGIIHATTQGGPARATEILVYKVYFDGFIGLNLGSSAAQSVILMVIVIALT FT AVQFRFIERRVQY" FT misc_feature order(11712..11780,11889..11957,11994..12062,12147..12215, FT 12294..12362,12474..12542) FT /locus_tag="pRL120012" FT /note="6 probable transmembrane helices predicted at aa FT 12-34, 71-93, 106-128,157-179, 206-228 and 266-288" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 11880..12560 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 35.8, E-value 1.3e-07" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 12576..13424 FT /transl_table=11 FT /locus_tag="pRL120013" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q6G5I9 (EMBL:BX897699); FT Bartonella henselae; sn-glycerol-3-phosphate transport FT system permease protein UgpE; ugpE; length 283 aa; FT id=64.66; ungapped id=64.89; E()=5.1e-72; 283 aa overlap; FT query 1-282 aa; subject 1-283 aa" FT /db_xref="GOA:Q1M590" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M590" FT /inference="similar to sequence:INSDC:BX897699" FT /protein_id="CAK11727.1" FT /translation="MVENRPFLNFLAHLVLIIGVTIVVFPVYVAFIASSHGPNDFLSGV FT VPLTPGSHIIENYSTMLSSGMTSSGAPPIGPMMINSLIMAVGVAVGKIAISILSAFAIV FT YFRFPFRTLAFWMIFITLMLPVEVRIVPTYKVVADLGMLNNYGGLIIPLIASATATFLF FT RQFFLTVPDELMEAARVDGAGPMKFFRDILLPLSITNIAALFIILFVLGWNQYLWPLII FT TTDQSFYTVVMGIQRMAAVADAEPRWNLVMAAVILAALPPVLVIVAMQRLFVKGLVETE FT K" FT misc_feature order(12594..12662,12822..12890,12909..12968,13011..13079, FT 13140..13208,13221..13280,13317..13385) FT /locus_tag="pRL120013" FT /note="7 probable transmembrane helices predicted at aa FT 7-29, 83-105, 112-131,146-168, 189-211, 216-235 and FT 248-270" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 12795..13412 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 72.7, E-value 1e-18" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 13426..14472 FT /transl_table=11 FT /locus_tag="pRL120014" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q92WD6 (EMBL:AL591985); FT Rhizobium meliloti; probable glycerol-3-phosphate ABC FT transporter ATP-binding protein; ugpC; length 349 aa; FT id=60.57; ungapped id=61.62; E()=3e-66; 350 aa overlap; FT query 1-346 aa; subject 1-348 aa" FT /db_xref="GOA:Q1M589" FT /db_xref="InterPro:IPR013611" FT /db_xref="UniProtKB/Swiss-Prot:Q1M589" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11728.1" FT /translation="MATINIIDVKKNYGAVPAVKGINLSVADGELIVLVGPSGCGKSTL FT LRMIAGLETISEGHVEIAGRNVNKAEPADRDIAMVFQNYALYPHMTVRGNLEYGLKNRG FT TERAEINRRVAEAAEILEIGPMLDRKPRELSGGQRQRVAMGRAIVREPAAFLFDEPLSN FT LDAKLRVQMRVEIRRLQRRLKTTSIYVTHDQLEAMTLADRLVVMNGGLVEQVGTPVAVY FT DRPASLFVASFIGSPPMNLVPIDVLRAADSASSLALPAGTDMVGLRPDALLVTKPAEPS FT VRLDATVELLEPIGGESHLHVRLGGSQQTVVLTVPGRPDFAENANIDVFARVGAMHPFN FT SDTGKRTD" FT misc_feature 13510..14055 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 225.1, E-value 1.3e-64" FT /inference="protein motif:Pfam:PF00005.11" FT misc_feature 14257..14439 FT /note="Pfam match to entry PF03459.4 TOBE, score FT 25.0,E-value 3.8e-06" FT /inference="protein motif:Pfam:PF03459.4" FT CDS 14528..15277 FT /transl_table=11 FT /locus_tag="pRL120015" FT /product="putative glycerophosphoryl diester FT phosphodiesterase" FT /EC_number="3.1.4.46" FT /note="similarity:fasta; SWALL:UGPQ_ECOLI (SWALL:P10908); FT Escherichia coli; glycerophosphoryl diester FT phosphodiesterase; ugpQ; length 247 aa; id=32.47; ungapped FT id=33.33; E()=1e-18; 234 aa overlap; query 10-242 aa; FT subject 7-235 aa" FT /note="similarity:fasta; SWALL:Q6A6P9 (EMBL:AE017283); FT Propionibacterium acnes; glycerophosphoryl diester FT phosphodiesterase; length 248 aa; id=41.7; ungapped FT id=42.24; E()=1.5e-29; 235 aa overlap; query 15-246 aa; FT subject 6-240 aa" FT /db_xref="GOA:Q1M588" FT /db_xref="InterPro:IPR017946" FT /db_xref="UniProtKB/TrEMBL:Q1M588" FT /inference="similar to sequence:UniProtKB:P10908" FT /inference="similar to sequence:INSDC:AE017283" FT /protein_id="CAK11729.1" FT /translation="MTTVEPRSGPRRNEVQAHRGASAIAPENTIAAFRAAAELGAEWVE FT LDVALLGDGTPVVIHDVSIDRCSSSKGNLADLTASDLDAIDAGSWFSPKFKGEPLPTLA FT RVVSALGELGLSANVEIKQHAHHKSLDQLVKVVDQHLKARAAHTKIMISSFDAAALKGM FT YEIDQSYELAMLWSKLPADWLDVLRSIPAKTIHLDYKALSIGFLEEAVRRGIKVRAWTC FT NDPRRLASFWDVGLTGVITDDPSVYLT" FT misc_feature 14579..15265 FT /note="Pfam match to entry PF03009.6 GDPD, score FT 169.5,E-value 7.2e-48" FT /inference="protein motif:Pfam:PF03009.6" FT CDS 15287..16072 FT /transl_table=11 FT /locus_tag="pRL120016" FT /product="putative DeoR family transcriptional regulator" FT /note="similarity:fasta; SWALL:GLPR_PSEAE (SWALL:Q51391); FT Pseudomonas aeruginosa; glycerol-3-phosphate regulon FT repressor; glpR; length 251 aa; id=38.05; ungapped FT id=38.36; E()=1.4e-27; 247 aa overlap; query 9-254 aa; FT subject 6-251 aa" FT /note="similarity:fasta; SWALL:Q8PQG4 (EMBL:AE011662); FT Xanthomonas axonopodis; glycerol-3-phosphate regulon FT repressor; glpR; length 256 aa; id=40.46; ungapped FT id=40.94; E()=2.1e-32; 257 aa overlap; query 6-261 aa; FT subject 1-255 aa" FT /db_xref="GOA:Q1M587" FT /db_xref="InterPro:IPR001034" FT /db_xref="UniProtKB/TrEMBL:Q1M587" FT /inference="similar to sequence:UniProtKB:Q51391" FT /inference="similar to sequence:INSDC:AE011662" FT /protein_id="CAK11730.1" FT /translation="MGQRIISSRQREILALIETEGVQYIEELARRYDLTTQTIRRDINA FT LCDLGHARRFHGGVDLPVEGSNISLNARAQLNRRAKRLIAKRVASDIGADATVFLGIGS FT TVQFVAEALRDHQGLTVITNNIHVALSLCDAPSVEVHLTGGLLRHDDRDVVGTDVIRFV FT EKFYATYAIVGAGALSPLNGLMDFSYSEAQITNALLENSQTQILAADVSKWTRNAAVRV FT APFSKLTRFYTDRLPGDAAATNALAESGLDVVTCSEDMT" FT misc_feature 15311..15988 FT /note="Pfam match to entry PF00455.10 DeoR, score FT 209.6,E-value 5.9e-60" FT /inference="protein motif:Pfam:PF00455.10" FT misc_feature 15353..15418 FT /note="Predicted helix-turn-helix motif with score FT 1700.000, SD 4.98 at aa 23-44, sequence FT QYIEELARRYDLTTQTIRRDIN" FT CDS 16069..16914 FT /transl_table=11 FT /locus_tag="pRL120017" FT /product="putative hydrolase" FT /note="similarity:fasta; SWALL:Q6MP97 (EMBL:BX842648); FT Bdellovibrio bacteriovorus; putative hydrolase; length 277 FT aa; id=41.53; ungapped id=42.38; E()=4.2e-34; 248 aa FT overlap; query 16-259 aa; subject 29-275 aa" FT /db_xref="GOA:Q1M586" FT /db_xref="InterPro:IPR006379" FT /db_xref="UniProtKB/TrEMBL:Q1M586" FT /inference="similar to sequence:INSDC:BX842648" FT /protein_id="CAK11731.1" FT /translation="MSYVDLAPSARELRDVRYLFTDIDDTLTTEGKLLPQTYEALWDLS FT RVGIAVVPVTGGSAGWCEHIVRAWPVAAVIGESGAYCVTRQNGAVVFDYWEDATLQAER FT QRQHLQAIKELVSQGSKTFRIAHDQVFRLADVAIDIQGHDPREVEDLASSIRAIGGTVA FT ISSIHINTWIGDYNKRSMSERVLTEMFGVDPDETAAVTAFVGDSRNDAPMFGFIRNSFG FT VNNIIPVLSQLQYAPKWVSSQPAGLGFADIAQTILDAAGAGSETSRQLLTEPAVMPARK FT " FT CDS complement(16872..17717) FT /transl_table=11 FT /locus_tag="pRL120018" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q986S6 (EMBL:AP003011); FT Rhizobium loti; ABC transporter, permease protein; length FT 280 aa; id=75; ungapped id=75; E()=2.4e-83; 280 aa overlap; FT query 1-280 aa; subject 1-280 aa" FT /db_xref="GOA:Q1M585" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M585" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11732.1" FT /translation="MAKRSFKSSVLPTILTYLGLAIGLVFSAFPIVWMFFSSLKSNTEI FT FALPPRLLPDDFTVAAYLTIFNDPVKVRFFINSYFVAGVVTALTLVVAIVTAYGFSRYQ FT FRFKNTLNIFIISTQTVPPITLLIPYFGMVVAFRIFDTYLALILTYLVFTLPYAVLLMT FT GYLNTLPKELDEAVLVDGGSSWTALWRVIVPVSIPGIVATAVYTFLLAWNEFLFALTLT FT KSMDLRTVPIGIQLLMGQHAFEWNEMMAMSVLGSLPLLVLYLVAQRYFLAGMTAGSVKS FT " FT misc_feature complement(16890..17495) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 54.6, E-value 2.7e-13" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(16923..16976,17088..17156,17217..17285, FT 17313..17381,17415..17483,17613..17681)) FT /locus_tag="pRL120018" FT /note="6 probable transmembrane helices predicted at aa FT 13-35, 79-101, 113-135,145-167, 188-210 and 248-265" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(17721..18659) FT /transl_table=11 FT /locus_tag="pRL120019" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q986S7 (EMBL:AP003011); FT Rhizobium loti; sugar ABC transporter, permease protein; FT length 298 aa; id=67.83; ungapped id=67.83; E()=1.4e-78; FT 286 aa overlap; query 27-312 aa; subject 13-298 aa" FT /db_xref="GOA:Q1M584" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M584" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11733.1" FT /translation="MNHSATALVAAQAKARRKGWLRYSTLRKLVPYFYVSPATLLLVLL FT MLFPMVMVFKYSLMDGAIMKKDAAFAGVQNYMTIFENPVFWQSVVQTLYFTIMSVIFHF FT IIGLAFALLLNTNRVDPLIRSILRVLFILPWLFTAVIIAIIWRLLLDPNGVVNSVLMAL FT HIINFKVEWFSSTRTAIHALTFANIWAGYPLYMVSLLAGLQGISKELYEAAGIDGANEI FT QKFWYITIPQLMPIIISIALLDFIWTMQVFPLVWMTTGGGPIYSTEVLSTFTYKLAFSQ FT YEFSLASASAMIILIISMSVTYFYIKHQQRR" FT misc_feature complement(17724..18395) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 48.1, E-value 2.5e-11" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(17742..17810,17919..17987,18048..18116, FT 18213..18281,18318..18386,18498..18566)) FT /locus_tag="pRL120019" FT /note="6 probable transmembrane helices predicted at aa FT 46-68, 106-128, 141-163,196-218, 239-261 and 298-320" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(18748..19995) FT /transl_table=11 FT /locus_tag="pRL120020" FT /product="putative substrate binding protein" FT /note="similarity:fasta; SWALL:Q986S8 (EMBL:AP003011); FT Rhizobium loti; mlr7225 protein; length 415 aa; id=68.91; FT ungapped id=68.91; E()=1.1e-111; 415 aa overlap; query FT 1-415 aa; subject 1-415 aa" FT /db_xref="GOA:Q1M583" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q1M583" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11734.1" FT /translation="MNIRKFGVTMRAAVAVWALCATSAFADTTIEFIQWWEPEMPSGAL FT RGIMNDFEAKNPGIKVTLVSGPYATTRDQIVVGAASGTLSDVVGLDGAWVNGLSKQGAI FT ASMDELMEKAKYDKSQITDIVKVDGKSVMFPLASFVYPVFVNLDIAKAAGVDKLPATRT FT EFAEAAKKMTDASKNQYGWVLPLSLQSPSGIQNDVMSWVWASGASMLKDGKPDLENDAV FT VGTLDYIASLNKEGVISPGIFAKKEQDKVEEFVNGRVGMMVDSLAHVNLIRERNPKLNF FT GISALPATDGYTGKRGMPYASWGIGISEGSQHKEEAWKLVEYLMSPDVNGRLVSIANAF FT PGNVHAKPDFVASDPIFAEAFKIFQSGYPANEFVGLPVAEELMRDMNVEVQKMFDGGQS FT AKEAAANTEKAWLAKF" FT misc_feature complement(19003..19986) FT /note="Pfam match to entry PF01547.11 SBP_bac_1, score FT 86.2, E-value 8.5e-23" FT /inference="protein motif:Pfam:PF01547.11" FT sig_peptide complement(19918..19995) FT /locus_tag="pRL120020" FT /note="Signal peptide predicted for pRL120020 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 1.000 between residues 26 and 27" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(20139..20330) FT /transl_table=11 FT /locus_tag="pRL120021" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q1M582" FT /protein_id="CAK11735.1" FT /translation="MQKALVSAPKIRKFAVKKPGATLFILLGKLSFVYESKEKMRHKQY FT KCCRKTLMMSINFMIFYQ" FT CDS 20570..21604 FT /transl_table=11 FT /locus_tag="pRL120022" FT /product="putative HTH-type transcriptional regulator" FT /note="similarity:fasta; SWALL:CYTR_ECOLI (SWALL:P06964); FT Escherichia coli, Escherichia coli O6, Escherichia coli FT O157:H7, and Shigella flexneri; hth-type transcriptional FT repressor CytR; cytR; length 341 aa; id=27.98; ungapped FT id=30.09; E()=2.5e-17; 343 aa overlap; query 8-343 aa; FT subject 11-336 aa" FT /note="similarity:fasta; SWALL:Q986T5 (EMBL:AP003011); FT Rhizobium loti; transcriptional regulator; length 344 aa; FT id=60.17; ungapped id=60.17; E()=1.3e-82; 344 aa overlap; FT query 1-344 aa; subject 1-344 aa" FT /db_xref="GOA:Q1M581" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q1M581" FT /inference="similar to sequence:UniProtKB:P06964" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11736.1" FT /translation="MAKKNYKSMDDFATAAGVSRPTLSKYFDDPSQIKEVTRKRIEAAL FT RKSHFEPNLFARHLNRKRTRNIGILVPTMSDPFYVQVVSLIELELREKGFWPVQISSHT FT RPELEAEAVRTLLSLKVAGAIVAPLGAGSRRSALERLRDAIPVVCFDNPADADLPYVGN FT DNAQSMAAIVQYLCRSGEPPIFLEIPHMTENAGERQAGYRATMAREGHSPLVIDCDAPP FT SWEFERLGYEQMQRILANGSLPGKTLLCANDRFAFGAMAAAFASGLKIGRNDACDVRIA FT GHDDHPLSRYTCPSLTTMAQNAPEIAAKSVELLLAHIESEDDGTTPVTNKVILEATLVM FT RESA" FT misc_feature 20588..20653 FT /note="Predicted helix-turn-helix motif with score FT 1674.000, SD 4.89 at aa 7-28, sequence FT KSMDDFATAAGVSRPTLSKYFD" FT misc_feature 20759..21577 FT /note="Pfam match to entry PF00532.8 Peripla_BP_1, score FT 26.9, E-value 7.3e-06" FT /inference="protein motif:Pfam:PF00532.8" FT CDS complement(21620..22555) FT /transl_table=11 FT /locus_tag="pRL120023" FT /product="putative lipase/esterase" FT /note="similarity:fasta; SWALL:Q8NKS0 (EMBL:AB078331); FT Pyrobaculum calidifontis; esterase; pc-esT; length 313 aa; FT id=46.66; ungapped id=48.83; E()=1.5e-33; 270 aa overlap; FT query 41-305 aa; subject 48-310 aa" FT /note="similarity:fasta; SWALL:Q986T4 (EMBL:AP003011); FT Rhizobium loti; probable lipase/esterase; length 321 aa; FT id=55.08; ungapped id=56.37; E()=9.1e-54; 305 aa overlap; FT query 4-302 aa; subject 8-311 aa" FT /db_xref="GOA:Q1M580" FT /db_xref="InterPro:IPR013094" FT /db_xref="UniProtKB/TrEMBL:Q1M580" FT /inference="similar to sequence:INSDC:AB078331" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11737.1" FT /translation="MTQLDESAKRALAWPGDPQTPVESCTPALARQQYLDSFADIQRPL FT EDVVETLERHAGAIRLKIWRGRAAPRQGAPALLYLHGGGFVIGAPETHEDICRTLANMA FT GAVVVSPDYRLAPEHPFPAAIDDCAAALVWMTEQADALGIDPLRVVVAGDSAGGNLAAV FT VALLARDGQVPAVIGQVLIYPVTDQLQTSDSYSRYEEDFGLTAAAMKWFRDHYLPDAAS FT RSDWRASPLNAASLAGVAPALVILAGYDVLFDEGAAYAERLGTEAKATTRTWPGQIHGF FT VSKRRAIPEGQEALEAIATAWRAMDPALAR" FT CDS complement(22552..23700) FT /transl_table=11 FT /locus_tag="pRL120024" FT /product="putative GFO/IDH/MocA family oxidoreductase" FT /note="similarity:fasta; SWALL:Q9LCW9 (EMBL:AJ007932); FT Streptomyces argillaceus; D-oliose 4-ketoreductase; mtmU; FT length 328 aa; id=29.18; ungapped id=32.46; E()=8.6e-07; FT 257 aa overlap; query 1-244 aa; subject 1-244 aa" FT /note="similarity:fasta; SWALL:Q986T3 (EMBL:AP003011); FT Rhizobium loti; dehydrogenase; length 382 aa; id=70.15; FT ungapped id=70.15; E()=2.4e-103; 382 aa overlap; query FT 1-382 aa; subject 1-382 aa" FT /db_xref="GOA:Q1M579" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M579" FT /inference="similar to sequence:INSDC:AJ007932" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11738.1" FT /translation="MAQTNGMKLRIGVVGCGNISLAYMRNAPLFCGVEITACADLNADA FT AKRRAAEFNLRAADVDSLIDDRNIDLILNLTIPAAHFDVSMRALSTGKHVFTEKPLGVT FT AAEGRSLVDAAAAKGLMLGSAPDTFLGAAGRHARRQMEAGAIGKPVTGTAFMMGRGMEH FT WHPDPSFYYQAGAGPLMDMGPYYLTMMVNLMGPIRRVQAVATSGQEERLITAEGPKQGT FT TFKVGTPTSVQSLLEFDCGATVTFGTSWDVFRHSNHPIELHGTEGSLRLPDPDNFGGSV FT ALSGRGAPWQETDTSGELFGAVNWPIAAPDRANYRMLGLADLARAIIEGRKPRASGDLA FT LHVLEVMEAILRAGETGLAQTISGTVAQPRELREDEARSLLA" FT misc_feature complement(23323..23676) FT /note="Pfam match to entry PF01408.8 GFO_IDH_MocA, score FT 99.7, E-value 7.3e-27" FT /inference="protein motif:Pfam:PF01408.8" FT CDS 23986..24804 FT /transl_table=11 FT /locus_tag="pRL120025" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:MOCC_RHIME (SWALL:P49304); FT Rhizobium meliloti; rhizopine catabolism protein MocC; FT mocC; length 325 aa; id=26.93; ungapped id=31.37; FT E()=0.036; 297 aa overlap; query 6-270 aa; subject 16-302 FT aa" FT /note="similarity:fasta; SWALL:Q986S5 (EMBL:AP003011); FT Rhizobium loti; mlr7228 protein; length 273 aa; id=70.22; FT ungapped id=70.48; E()=1.2e-74; 272 aa overlap; query 1-271 FT aa; subject 1-272 aa" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:Q1M578" FT /inference="similar to sequence:UniProtKB:P49304" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11739.1" FT /translation="MKNAELQIGCQTFTWEMLGTDWGGGPDDLVRAIADGGYAGIEITD FT TMIGHYALKPADFARTLTDAGLTLVSFAFGSASGFTVPEKIASDLDTARRWVDFAANFP FT GAMVSMGSATVVSDGPRDEKFAIAAECYNRATEIGQSAGVTVAVHPSSHHNTLLFTRND FT YDRLFALLDPQVGWVPDTGHILRGGQQIDDTLAAHRDRIRYVHLKDVDAGGIWAMLGEG FT VCDVPAVISAARDAPKFIGWIVVEEESDHAATDPAAAVRTNRETLRRLGF" FT CDS complement(24897..25658) FT /transl_table=11 FT /locus_tag="pRL120026" FT /product="putative DeoR family transcriptional regulator" FT /note="similarity:fasta; SWALL:AGAR_ECOLI (SWALL:P42902); FT Escherichia coli, Escherichia coli O6, and Escherichia coli FT O157:H7; putative aga operon transcriptional repressor; FT agaR; length 269 aa; id=30.64; ungapped id=30.89; FT E()=5.6e-19; 248 aa overlap; query 5-250 aa; subject 17-264 FT aa" FT /note="similarity:fasta; SWALL:Q986T2 (EMBL:AP003011); FT Rhizobium loti; transcriptional regulator; length 253 aa; FT id=65.21; ungapped id=65.21; E()=1.8e-57; 253 aa overlap; FT query 1-253 aa; subject 1-253 aa" FT /db_xref="GOA:Q1M577" FT /db_xref="InterPro:IPR001034" FT /db_xref="UniProtKB/TrEMBL:Q1M577" FT /inference="similar to sequence:UniProtKB:P42902" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11740.1" FT /translation="MLAEQRRQQIMLELQRVGQARTRQLAEFFEVSEVTIRSDLEIMDA FT KKQLIKTHGGAIALPSDSPAAAFEERMQRNFDAKRRIAQMAARQIIDNQSIVFDSGSTL FT LQVAMQMPPVNNVVVATTAMNIAQHLMYRPGLDVHMIGGRVFPSTVSTIVQDSDKAVGG FT LVAHQAFVGAHAIDQAFDVVDVSEDVARTKRNLVRMARRVVLVADSSKFDIGASSKAFS FT LSRVDLIITDSNMPHSIRHRLDKLGVEVRYA" FT misc_feature complement(24963..25643) FT /note="Pfam match to entry PF00455.10 DeoR, score FT 186.8,E-value 4.3e-53" FT /inference="protein motif:Pfam:PF00455.10" FT misc_feature complement(25536..25601) FT /note="Predicted helix-turn-helix motif with score FT 1087.000, SD 2.89 at aa 20-41, sequence FT ARTRQLAEFFEVSEVTIRSDLE" FT CDS 25903..26703 FT /transl_table=11 FT /locus_tag="pRL120027" FT /product="putative aldolase" FT /note="similarity:fasta; SWALL:ALF1_PYRFU (SWALL:P58314); FT Pyrococcus furiosus; fructose-bisphosphate aldolase class FT i; fbA; length 281 aa; id=30.82; ungapped id=33.46; FT E()=1.6e-12; 279 aa overlap; query 3-265 aa; subject 7-279 FT aa" FT /note="similarity:fasta; SWALL:Q986T1 (EMBL:AP003011); FT Rhizobium loti; putative aldolase; length 266 aa; id=81.95; FT ungapped id=81.95; E()=7.3e-82; 266 aa overlap; query 1-266 FT aa; subject 1-266 aa" FT /db_xref="GOA:Q1M576" FT /db_xref="InterPro:IPR002915" FT /db_xref="UniProtKB/TrEMBL:Q1M576" FT /inference="similar to sequence:UniProtKB:P58314" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11741.1" FT /translation="MGLGTKIRLARLFSNPSGHLFGGAVDHFVGYGNVREGGLADLPGA FT LRRVMAGGPDYISIQPGAARHLWSEYAGKAALVIQGGCFTADDRIRQLIATPEDAVRYG FT ADALAVAIPVRGATEGEYIRWLTDTVNAAARFEMPVVAHVYPRDFSDGGKIVFTPDEIA FT YAVRIGFEAGVDVIKVGYTGDFESFRETVATCPIPVVIAGGPKTDTLLGALVQTSEALR FT AGAKGAVVGRNLWGHGDTTMAARAFKFVIHKGMTPEDALAAAGA" FT misc_feature 25969..26658 FT /note="Pfam match to entry PF01791.6 DeoC, score FT 38.6,E-value 6.9e-10" FT /inference="protein motif:Pfam:PF01791.6" FT CDS 26707..27648 FT /transl_table=11 FT /locus_tag="pRL120028" FT /product="putative Pfk family kinase" FT /note="similarity:fasta; SWALL:RBSK_ECOLI (SWALL:P05054); FT Escherichia coli, and Escherichia coli O157:H7; ribokinase; FT rbsK; length 309 aa; id=27.49; ungapped id=29.09; FT E()=3.1e-08; 291 aa overlap; query 10-288 aa; subject FT 10-296 aa" FT /note="similarity:fasta; SWALL:Q986T0 (EMBL:AP003011); FT Rhizobium loti; mlr7223 protein; length 316 aa; id=54.9; FT ungapped id=55.08; E()=3.3e-59; 306 aa overlap; query 7-312 FT aa; subject 7-311 aa" FT /db_xref="GOA:Q1M575" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q1M575" FT /inference="similar to sequence:UniProtKB:P05054" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11742.1" FT /translation="MSRPFQVLGFGALAIDDIIYVDRGLTAGKGKVTKRATDHGGNVAT FT ALVAVARLGGQAGFIGWLGDETTADVAGSELERDGVDISLAPRHADAAPIRSVITVAPD FT GDRFIAYDDDVLHGTSDALPDDVLMRAPVLLIDGYATHSESVVARARALGLAVIADIEW FT TVGAATDRILAVADHLVLPLAFGKEYTGEGDPTMILDKLWSKDRSAVVLTDGERGAYLR FT QRADVTRWHVPAYQVQAVDTTGAGDCFHGAYALALARGKSPLDCVAYATAAAAISVTAR FT GGRRGLPDHQTCLTWMAAENAPAPLPMPGYQK" FT misc_feature 26722..27576 FT /note="Pfam match to entry PF00294.10 PfkB, score FT 106.4,E-value 7.1e-29" FT /inference="protein motif:Pfam:PF00294.10" FT CDS 27950..29134 FT /transl_table=11 FT /locus_tag="pRL120029" FT /product="putative ATP-binding transporter" FT /note="similarity:fasta; SWALL:Q54333 (EMBL:U12007); FT Streptomyces lividans; MsiK; msiK; length 314 aa; id=56.66; FT ungapped id=57.43; E()=1.5e-54; 300 aa overlap; query FT 14-312 aa; subject 1-297 aa" FT /note="similarity:fasta; SWALL:Q986S9 (EMBL:AP003011); FT Rhizobium loti; sugar ABC transportor, ATP-binding protein; FT length 381 aa; id=74.8; ungapped id=74.8; E()=6.1e-98; 381 FT aa overlap; query 14-394 aa; subject 1-381 aa" FT /db_xref="GOA:Q1M574" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M574" FT /inference="similar to sequence:INSDC:U12007" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11743.1" FT /translation="MEDVIRTGTGGRDVAVVVLDKICKTYGNSYHAIKDLSLTIHDGEF FT LILVGPSGCGKSTALRMIAGLEEISSGTLSIGGQDVVDLAPKDRDIAMVFQSYALYPHM FT TVFDNIAFSMKLAGKNKAERTKRVHEIAKILQLEPLLGNKPAQLSGGQRQRVAMGRAMV FT REPAAFLMDEPLSNLDAKLRVQMRAEIASLQRQLGVTTIYVTHDQTEALTMGDRVAVLK FT GGVLQQVDTPKALYHRPVNAFVAGFIGSPSMNLFEGRLASGRIHLPGFSIPLSDGAFER FT APGLSAFEGKDVIFGVRPEDLYDSRLPSGASHPTIPVVVKSIEELGSELIVHLKIDAVR FT IDSGDPDAVEDLSGAANAVARFEAVSAVETGQSIDLAIDPAKLHFFNPQTHMAL" FT misc_feature 28076..28621 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 212.0, E-value 1.1e-60" FT /inference="protein motif:Pfam:PF00005.11" FT CDS 29268..30344 FT /transl_table=11 FT /locus_tag="pRL120030" FT /product="putative GFO/IDH/MocA family FT oxidoreductase/dehydrogenase" FT /note="similarity:fasta; SWALL:Q6B6R7 (EMBL:AY676876); FT Bacillus subtilis; myo-inositol dehydrogenase; iolG; length FT 344 aa; id=33.33; ungapped id=35.52; E()=3.4e-10; 162 aa FT overlap; query 9-166 aa; subject 3-158 aa" FT /note="similarity:fasta; SWALL:Q92L86 (EMBL:AL591793); FT Rhizobium meliloti; putative oxidoreductase protein; length FT 348 aa; id=89.65; ungapped id=89.65; E()=3.3e-128; 348 aa FT overlap; query 11-358 aa; subject 1-348 aa" FT /db_xref="GOA:Q1M573" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M573" FT /inference="similar to sequence:INSDC:AY676876" FT /inference="similar to sequence:INSDC:AL591793" FT /protein_id="CAK11744.1" FT /translation="MPAKQERRLRIGVLGAGQIAQAAHFESCTKAANADLYAICDVAED FT LRERMAITHGAEKTYGDYDQMLADPDLDAVVIATADAFHVPASLRALQAGKHVLCEKPV FT GVTIEECLELKAAVDKSGKVFQVGHMKRFDAGLQAAKSFIRDEMGEMVALKAWYCDSTH FT RYPMTDAVQPLIVTSANAKKPSTNPKADLRRYYMLAHGCHLIDTARYFAGDIVSVNARL FT SERAGIWCWFVDVEFASGTLGHLDLTVQVRMDWHEGFQIYGKNGSILGKTYNPWYYKTS FT EVDIFREVDGATHRVLGADGHFYRRQVEGFARTILDGAVMEGADIDDGLASVRAMVAVA FT RSVENGKTVALADVTGGV" FT misc_feature 29292..29654 FT /note="Pfam match to entry PF01408.8 GFO_IDH_MocA, score FT 130.2, E-value 4.8e-36" FT /inference="protein motif:Pfam:PF01408.8" FT CDS 30344..31189 FT /transl_table=11 FT /locus_tag="pRL120031" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q92JS4 (EMBL:AL591793); FT Rhizobium meliloti; hypothetical protein smc03811; length FT 276 aa; id=75.82; ungapped id=75.82; E()=1.7e-75; 273 aa FT overlap; query 1-273 aa; subject 1-273 aa" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:Q1M572" FT /inference="similar to sequence:INSDC:AL591793" FT /protein_id="CAK11745.1" FT /translation="MKLGIFAKTFEGTEPATVLNSVAGAGFNCAQYNMACSGLAPMPEI FT ITEAQARAVGEAARSSGVEIVAVSGTFNMIHPDPAVREAGLRRLATLAERCAGMSTTLI FT TLCTGTRDPIDQWKAHADNDTPEAWRDLLEAMGAAIEIAERYEVDLGIEPELANVVNSA FT EKASRLIAALKSPRVKIVLDPANLFEIATLDEQRSIVSSGIDLLADRIVMAHAKDRNPD FT GSFATAGKGVLDYAHYLGRLKAIGFKGSLVTHGLSASEAAGVAAFLKNSLDGEAAGAGR FT " FT CDS 31186..31995 FT /transl_table=11 FT /locus_tag="pRL120032" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q92L87 (EMBL:AL591793); FT Rhizobium meliloti; hypothetical protein smc03810; length FT 269 aa; id=69.96; ungapped id=69.96; E()=9.2e-69; 263 aa FT overlap; query 7-269 aa; subject 5-267 aa" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q1M571" FT /inference="similar to sequence:INSDC:AL591793" FT /protein_id="CAK11746.1" FT /translation="MRRAEPFETSDGTILNVDMAGEGASIIFQHGLCGDAAQTDEAFPL FT EAGFRRVTIEARGHGHSQAGNPEQLSIATFCDDIAAYIEKSLTPPMVIGGISMGAAIAL FT RLAVKRPDLVKALIIARPAWLTASAPENMSPNAEVGHLLKTLPPDHAKAAFLAGPVGVR FT LAAEAPDNLASLAGFFSRTPLDVTAELLTRISNDGPDVTDQDVGNLTVPTLVIGHDRDS FT IHPLSHARALAERIAGARFVQITPKTKSRPQYVADFRLAMGNFLKEL" FT CDS 32000..32701 FT /transl_table=11 FT /locus_tag="pRL120033" FT /product="putative D-allulose-6-phosphate 3-epimerase" FT /note="similarity:fasta; SWALL:ALSE_ECOLI (SWALL:P32719); FT Escherichia coli; D-allulose-6-phosphate 3-epimerase; alsE; FT length 231 aa; id=31.45; ungapped id=33.5; E()=1.7e-13; 213 FT aa overlap; query 22-229 aa; subject 6-210 aa" FT /note="similarity:fasta; SWALL:Q986S1 (EMBL:AP003011); FT Rhizobium loti; ribulose-5-phosphate 3-epimerase; length FT 240 aa; id=56.88; ungapped id=56.88; E()=3.4e-42; 225 aa FT overlap; query 9-233 aa; subject 12-236 aa" FT /db_xref="GOA:Q1M570" FT /db_xref="InterPro:IPR000056" FT /db_xref="UniProtKB/TrEMBL:Q1M570" FT /inference="similar to sequence:UniProtKB:P32719" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11747.1" FT /translation="MTTPSKSWIADLPKDRLIAEFSVWSADLVRLADDLARVDRHVDVL FT HIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHLMVSDSILLSQIEQFADAGSDLISL FT HVENESVAAEALDLLDRRGVAAGMVLKVDTPVERVEKYASRLRFVTLLGTAIGVKGQGL FT DEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTVPLLRQSGAETVVLGSLAFNAPS FT LDERMAWVRAL" FT misc_feature 32048..32662 FT /note="Pfam match to entry PF00834.7 Ribul_P_3_epim, score FT 77.8, E-value 2.8e-20" FT /inference="protein motif:Pfam:PF00834.7" FT CDS 32716..33681 FT /transl_table=11 FT /locus_tag="pRL120034" FT /product="putative glucokinase" FT /note="similarity:fasta; SWALL:GLK_STRCO (SWALL:P40184); FT Streptomyces coelicolor, and Streptomyces lividans; FT glucokinase; glkA; length 317 aa; id=37.14; ungapped FT id=39.13; E()=3.3e-29; 315 aa overlap; query 4-309 aa; FT subject 3-310 aa" FT /note="similarity:fasta; SWALL:Q986S0 (EMBL:AP003011); FT Rhizobium loti; glucose kinase; length 339 aa; id=53.14; FT ungapped id=53.65; E()=8.3e-54; 318 aa overlap; query 3-317 FT aa; subject 4-321 aa" FT /db_xref="GOA:Q1M569" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:Q1M569" FT /inference="similar to sequence:UniProtKB:P40184" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11748.1" FT /translation="MQQVAIGIDLGGTQVRAALVDEQGRILARAAEPTDALAGPDRVLA FT QICGLTDGLLAASNPASVVGVGVSAPGPLDTVAGVASNIPTLSGFVDFPLKAELQKRFP FT FPVDLENDAIAAAIGEWQFGAGKGLDNLVYVTVSTGIGGGVVSDGRVVRGRKGMAAHVG FT HMSVVPNGELCPCGNRGCFEAYGSGTAFARRAQMRAMETSGTTIGSDGGAIDSRGVFAA FT ARDGDRLANQLVDEEAEILGRGFTSLIHIFSPDIIVMGGGLSHEFDRLQPGIQAYITQW FT AMPAFRDVKVVLAALDQNSGLVGAAALAFLTGKVPAIDQL" FT misc_feature 32734..33288 FT /note="Pfam match to entry PF00480.8 ROK, score FT 185.8,E-value 8.5e-53" FT /inference="protein motif:Pfam:PF00480.8" FT CDS 34035..35297 FT /transl_table=11 FT /gene="thuE" FT /locus_tag="pRL120035" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q9R9Q7 (EMBL:AF175299); FT Rhizobium meliloti; ThuE; length 423 aa; id=78.25; ungapped FT id=79.18; E()=3.3e-132; 423 aa overlap; query 1-420 aa; FT subject 3-423 aa" FT /db_xref="GOA:Q1M568" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q1M568" FT /inference="similar to sequence:INSDC:AF175299" FT /protein_id="CAK11749.1" FT /translation="MKKFALALSAISVAIAAGSVRAAEISFAANTTGKNVEFLHNQLAI FT FEKNTGNHVKLVTMPSSSSEQFSQYRLWLAAGNKDVDVYQTDVIWAPQLADQFVDLKEA FT AKDVVGQFFPSIIASQTVNGRLVALPLFTDAPALFYRKDLLEKYGKQPPKTWDEMAATA FT KEIQDKERQAGQKDLWGYVFQGNSYEGLTCNGLEWVKSSGGGQIVEPDGTISINNEKAA FT AALERAKDWIGTISPPGVLAYQEEESRGVWQTGNAVFMRNWPYAYSLGNGADSAVKGKF FT DVMTLPVAAVGDKPSSTLGGWNLAVSKYSEQQDAAIALVKFLASKDVQKARAIELSNLP FT TLTDLYDDKDVAAAQPFMPNWKPIFQDAVPRPSATAKVKYNEVSSKFWTAVHNTLSGSG FT SAAENLELLEADLTTLKGDAW" FT sig_peptide 34035..34100 FT /gene="thuE" FT /locus_tag="pRL120035" FT /note="Signal peptide predicted for pRL120035 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.990 between residues 22 and 23" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 34050..35024 FT /note="Pfam match to entry PF01547.11 SBP_bac_1, score FT 160.5, E-value 3.6e-45" FT /inference="protein motif:Pfam:PF01547.11" FT CDS 35367..36353 FT /transl_table=11 FT /gene="thuF" FT /locus_tag="pRL120036" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q9R9Q6 (EMBL:AF175299); FT Rhizobium meliloti; ThuF; length 328 aa; id=83.6; ungapped FT id=83.6; E()=1.3e-106; 311 aa overlap; query 18-328 aa; FT subject 18-328 aa" FT /db_xref="GOA:Q1M567" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M567" FT /inference="similar to sequence:INSDC:AF175299" FT /protein_id="CAK11750.1" FT /translation="MSEIVVPQAVKPRVSHFRATTELRSERIRSAWMFLAPTLLILAIV FT AGWPLFRTIYFSFTNASLNDLGNAQFVGFDNYLSWVTLKSGRTVYRGLLADPVWWNAVW FT NTAKFTVLSVVIETVLGLIVALVLNARFVGRGIVRAAILIPWAIPTIVSAKMWAWMLND FT QFGILNDILLGFGLISEKIAWTANLETAMIAVLIVDVWKTTPFMALLILAGLQMVPGDI FT YEAAKIDGVNPVKVFWRLTLPLIRPAIMVAVIFRMLDAMRIFDLIYVLTPNNAQTKTMS FT VMARENLFDFDKFAYGATASTVLFLIIASVTVLYIWLGRVKLGGEER" FT misc_feature order(35466..35534,35691..35756,35775..35843,35943..36011, FT 36072..36140,36252..36320) FT /gene="thuF" FT /locus_tag="pRL120036" FT /note="6 probable transmembrane helices predicted at aa FT 34-56, 109-130, 137-159,193-215, 236-258 and 296-318" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 35661..36347 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 41.0, E-value 3.4e-09" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 36353..37183 FT /transl_table=11 FT /gene="thuG" FT /locus_tag="pRL120037" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q9R9Q5 (EMBL:AF175299); FT Rhizobium meliloti; ThuG; length 276 aa; id=81.88; ungapped FT id=81.88; E()=5e-89; 276 aa overlap; query 1-276 aa; FT subject 1-276 aa" FT /db_xref="GOA:Q1M566" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M566" FT /inference="similar to sequence:INSDC:AF175299" FT /protein_id="CAK11751.1" FT /translation="MLLSIAKNTLFYLLVTIIVIIAVFPFYYAILTSLKTGTALFKVDY FT WPTSISFGNYTSVMGQGGFVRSLGNSAMIACVVVSASLLLSITASFALARVHFRGRALL FT MLTILSVSMFPQIAVLAGLFELIRWIGIFNTPFALIFSYMIFTLPFTVWVLTTFMRELP FT IEIEEAAIVDGASPWVIITQVFMPLMWPALVTTGLLAFITAWNEFLFALTFTSSDTQRT FT VPVAIALLSGNSAFEIPWGNIMAASVIVTVPVVVLVLIFQRRIISGLTAGGVKG" FT misc_feature order(36377..36445,36563..36631,36650..36718,36761..36829, FT 36890..36958,37064..37132) FT /gene="thuG" FT /locus_tag="pRL120037" FT /note="6 probable transmembrane helices predicted at aa FT 9-31, 71-93, 100-122, 137-159,180-202 and 238-260" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 36542..37165 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 53.1, E-value 8e-13" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 37195..38220 FT /transl_table=11 FT /gene="thuK" FT /locus_tag="pRL120038" FT /product="putative ABC transporter component" FT /note="similarity:fasta; SWALL:Q9R9Q4 (EMBL:AF175299); FT Rhizobium meliloti; ThuK; length 342 aa; id=77.71; ungapped FT id=77.71; E()=6.5e-100; 341 aa overlap; query 1-341 aa; FT subject 1-341 aa" FT /db_xref="GOA:Q1M565" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M565" FT /inference="similar to sequence:INSDC:AF175299" FT /protein_id="CAK11752.1" FT /translation="MAEIRLENIRKSFGAFEVIKGVTMDIRRGEFMVFVGPSGCGKSTL FT LRLISGLEDITSGTLSFDNKTVNQHAPSKRGIAMVFQSYALYPHMTVFDNMAFGMKLSG FT STRDECRQRVEQAAGMLQLSPYLDRLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSN FT LDAALRVATRLEIAKLHRSMHNTTMIYVTHDQVEAMTLADRICVLRDGVVEQIGTPLEL FT YESPNSVFVAGFIGSPKMNFLSGGLAQPYDSHTIGVRAEHVRITPESPVWSGTVIHSEI FT LGADSFVYLDIGADEPFVVREAGVSSHAPGQTLGLVPLASHVHRFDRSGRALERASMRA FT A" FT misc_feature 37279..37827 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 218.6, E-value 1.2e-62" FT /inference="protein motif:Pfam:PF00005.11" FT misc_feature 37990..38169 FT /note="Pfam match to entry PF03459.4 TOBE, score FT 40.4,E-value 5e-09" FT /inference="protein motif:Pfam:PF03459.4" FT CDS 38284..39069 FT /transl_table=11 FT /gene="thuA" FT /locus_tag="pRL120039" FT /product="putative sugar uptake related protein" FT /note="similarity:fasta; SWALL:Q9R9Q3 (EMBL:AF175299); FT Rhizobium meliloti; ThuA; length 270 aa; id=81.99; ungapped FT id=81.99; E()=3.5e-96; 261 aa overlap; query 1-261 aa; FT subject 10-270 aa" FT /note="similarity:fasta; SWALL:Q8UAN1 (EMBL:AE009264); FT Agrobacterium tumefaciens; trehalose utilization-related FT protein; thuA; length 263 aa; id=85.82; ungapped id=85.82; FT E()=1.8e-98; 261 aa overlap; query 1-261 aa; subject 3-263 FT aa" FT /db_xref="InterPro:IPR009381" FT /db_xref="UniProtKB/TrEMBL:Q1M564" FT /inference="similar to sequence:INSDC:AF175299" FT /inference="similar to sequence:INSDC:AE009264" FT /protein_id="CAK11753.1" FT /translation="MTIRTVVWGENIHENTNEIVRGIYPEGMHTTIANALNTDPSISAT FT TATLQEPEHGLSEARLTETDVLTWWGHKDHGAVSDVVVERVAKRVWEGMGLLVLHSGHF FT SKIFKRLMGTPCALKWREAGERERLWTINQRHPIAAGIGEHFELENEEMYGEQFSVPEP FT LETVFISWFQGGEVFRSGLTWRRGAGNIFYFRPGHETYPTYHDVNVQKVLINGVKWAYN FT PEGSLTGITDAPNVPVEKALEPIVERGPRLHQAGEAGYR" FT misc_feature 38290..39012 FT /note="Pfam match to entry PF06283.1 DUF1037, score 601.0, FT E-value 8.7e-178" FT /inference="protein motif:Pfam:PF06283.1" FT CDS 39232..40269 FT /transl_table=11 FT /gene="thuB" FT /locus_tag="pRL120040" FT /product="putative GFO/IDH/MocA sugar uptake related FT protein" FT /note="similarity:fasta; SWALL:Q9R9Q2 (EMBL:AF175299); FT Rhizobium meliloti; ThuB; length 365 aa; id=68.69; ungapped FT id=68.69; E()=2.3e-95; 345 aa overlap; query 1-345 aa; FT subject 6-350 aa" FT /note="similarity:fasta; SWALL:Q7CS78 (EMBL:AE008348); FT Agrobacterium tumefaciens; agr_l_2956p; length 349 aa; FT id=71.13; ungapped id=71.13; E()=1.4e-96; 336 aa overlap; FT query 1-336 aa; subject 1-336 aa" FT /db_xref="GOA:Q1M563" FT /db_xref="InterPro:IPR018247" FT /db_xref="UniProtKB/TrEMBL:Q1M563" FT /inference="similar to sequence:INSDC:AF175299" FT /inference="similar to sequence:INSDC:AE008348" FT /protein_id="CAK11754.1" FT /translation="MRLIILGTGGWANTHAMNFSEIADVKIVAAVDTDEVRLRAFALRH FT GIPLTFTSLDDALAWGEFDAVTNVTPDRAHYSTTMKILGAGKHVLCEKPLAVNYREAKE FT MADAAAASGKVTMVNLTYRNVAPLQAARKMVLDGRLGAIRHFEASYLQSWLVSKAWGDW FT TKESQWLWRLSTKHGSNGVLGDVGIHILDFAVFAAGSDVKAAASHLKVFDKSPGNRIGE FT YDLDANDSFLMMAELENGAAGVIHATRWATGHLNELRLRLHGDKGALEVVHTPEGSTLR FT ACEGPDADKAIWRKIEVEPVITNFQRFANAVQKGQPDEPGFGHAAKLQFVLDHAVKTAG FT ALTEL" FT misc_feature 39232..39591 FT /note="Pfam match to entry PF01408.8 GFO_IDH_MocA, score FT 119.7, E-value 6.8e-33" FT /inference="protein motif:Pfam:PF01408.8" FT misc_feature 39625..40026 FT /note="Pfam match to entry PF02894.4 GFO_IDH_MocA_C, score FT 10.3, E-value 0.038" FT /inference="protein motif:Pfam:PF02894.4" FT CDS complement(40415..40810) FT /transl_table=11 FT /locus_tag="pRL120041" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q8YKA2 (EMBL:AP003603); FT Anabaena sp.; alr8014 protein; length 134 aa; id=44.34; FT ungapped id=45.53; E()=3.5e-13; 115 aa overlap; query FT 15-129 aa; subject 10-121 aa" FT /db_xref="UniProtKB/TrEMBL:Q1M562" FT /inference="similar to sequence:INSDC:AP003603" FT /protein_id="CAK11755.1" FT /translation="MPASASTKHLTSIELGRIRRAVGIARLMDTAVRLPVIGVRIGADS FT ILGLIPAVGDIAASLIGLFIIDEARRLGIPTHKLARMAVNLGIDAAGGTVPLLGDIFDV FT YFKSHRRNVGIILDHFGISEDELNRRI" FT CDS complement(40981..42054) FT /transl_table=11 FT /locus_tag="pRL120042" FT /product="putative alcohol dehydrogenase" FT /note="similarity:fasta; SWALL:ADH_SULSO (SWALL:P39462); FT Sulfolobus solfataricus; NAD-dependent alcohol FT dehydrogenase; adH; length 347 aa; id=28.15; ungapped FT id=29.9; E()=4.6e-15; 341 aa overlap; query 25-354 aa; FT subject 16-347 aa" FT /note="similarity:fasta; SWALL:Q92WD4 (EMBL:AL591985); FT Rhizobium meliloti; putative oxidoreductase protein; length FT 359 aa; id=90.11; ungapped id=90.11; E()=3.9e-117; 354 aa FT overlap; query 2-355 aa; subject 6-359 aa" FT /db_xref="GOA:Q1M561" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M561" FT /inference="similar to sequence:UniProtKB:P39462" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11756.1" FT /translation="MTIPEKMAAVLLTGHGGLDKLVYDREVPVPRPADGEVLIRVTACG FT MNNTDVWVRQGAYGTEDDPSAVSTWRRQGNTLTFPRIQGTDTVGHIVGVGAGVNPARIG FT ERVMVDFSIYNRDDDSLADIDYMGHGRDGGYAEYMALPAENAHVVATDLTDVELATFCC FT AYLTGERMLERARLVAGERVLVTGASGGVGSAIIQLARARSAIPIAVAGPGKEAAMFDI FT GAEAVVTRGKGDLVEAAHSASRGQPIDVVADLVGGPLFNDLLKILRPEGRYTTAGAIAG FT PVVQLDLRTMYLKQLELHGSSQGSRADFRRIVGYIESRKIRPLVGGVYPLSEFHRAQTD FT FMAKNFVGKLVVVPDET" FT misc_feature complement(40993..42006) FT /note="Pfam match to entry PF00107.11 ADH_zinc_N, score FT 177.8, E-value 2.2e-50" FT /inference="protein motif:Pfam:PF00107.11" FT CDS complement(42069..43481) FT /transl_table=11 FT /locus_tag="pRL120043" FT /product="putative aminotransferase" FT /note="similarity:fasta; SWALL:Q9AH00 (EMBL:AF323694); FT Pseudomonas fluorescens; BioA; bioA; length 453 aa; FT id=40.04; ungapped id=41.21; E()=7.7e-64; 457 aa overlap; FT query 15-470 aa; subject 7-451 aa" FT /note="similarity:fasta; SWALL:Q92WD3 (EMBL:AL591985); FT Rhizobium meliloti; putative aminotransferase protein; FT length 458 aa; id=90.13; ungapped id=90.13; E()=2.5e-169; FT 456 aa overlap; query 12-467 aa; subject 1-456 aa" FT /db_xref="GOA:Q1M560" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q1M560" FT /inference="similar to sequence:INSDC:AF323694" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11757.1" FT /translation="MRPYFQERGYDMLDRSNELAAWDRDHFFHPSTHMGGHARGETPTR FT VVAGGEGVYITDTTGRKSLDAFAGLYCVNVGYGRQKIADAIAEQAKNLAYYHAYVGHGT FT EASITLSKMIIDRAPTGMSRVYFGLSGSDANETNIKLIWYYNNILGRPEKKKIISRWRG FT YHGSGVMTGSLTGLALFHNAFDLPRAPVLHTEAPYYFRRPDRSMSEEQFSQYCADKLEE FT MIIAEGPETIAAFIGEPILGTGGIVPPPKSYWQKIQTVLDKYDILLVADEVVTGFGRLG FT TMFGSDHYDMKPDVITIAKGLTSAYAPLSGTIVSNKIWQVLVQGSDQLGAIGHGWTYSA FT HPICAAAGIANLELIDELGIVENAGTTGAYFRSELEKAVSGHRNVGEVRGDGLMAAVEF FT VDDKDDRTFFDAGRKIGPQVASALLERGVIGRAMPQGDILGFAPPLCLTREEADIVVKA FT AADAIETVFKNI" FT misc_feature complement(42081..43385) FT /note="Pfam match to entry PF00202.8 Aminotran_3, score FT 283.3, E-value 3.9e-82" FT /inference="protein motif:Pfam:PF00202.8" FT CDS complement(43493..44989) FT /transl_table=11 FT /gene="gabD" FT /locus_tag="pRL120044" FT /product="succinate-semialdehyde dehydrogenase [NADP+]" FT /EC_number="1.2.1.16" FT /note="similarity:fasta; SWALL:GABD_ECOLI (SWALL:P25526); FT Escherichia coli; succinate-semialdehyde dehydrogenase FT [NADP+]; gabD; length 482 aa; id=52.19; ungapped id=52.19; FT E()=2.2e-95; 479 aa overlap; query 16-494 aa; subject 2-480 FT aa" FT /note="similarity:fasta; SWALL:Q92WD2 (EMBL:AL591985); FT Rhizobium meliloti; putative succinate-semialdehyde FT dehydrogenase protein; length 498 aa; id=81.32; ungapped FT id=81.32; E()=1e-151; 498 aa overlap; query 1-498 aa; FT subject 1-498 aa" FT /db_xref="GOA:Q1M559" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q1M559" FT /inference="similar to sequence:UniProtKB:P25526" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11758.1" FT /translation="MTAVFARPAYHDALSRLADRHLLRDLAYVGGRWIAGQSGKSFEVT FT DPASAATLAWVASLGADETAVAINAASEACAAWRAMLPQGRAAILRKWFELMLAAKEDL FT ALIMTLEQGKPIAESRGEIDYAASFVEWYAEEGKRLNAESVTSHLPGAEMIVRREALGV FT VGIVTPWNFPSAMLTRKVAAALAAGCTVVAHPSSETPLSALALAELGERAGVPAGVFNV FT VTGHAATIVGRMCADTRVRAMSFTGSTGIGRLIAAECAPTLKRLVMELGGHAPLIIFDD FT ADIEKAVEIAVNAKFATSGQDCLAANRIFVQRRIADAFTKAFADRIAELKVGAGLEDGA FT EIGPLMHERAVAKVEEQVADALGHGARLVTGGRRHKAGRLFYEPTLLSDVPADALIMRE FT ETFGPVAAIAAFDTEDEVIARANDTEYGLVAYIVTENGARQMRLGRALEYGMVAVNRVK FT ITGAPIPFGGWKQSGLGREGSRHGLEAFTELKYLCIDTAA" FT misc_feature complement(43502..44893) FT /note="Pfam match to entry PF00171.9 Aldedh, score 622.9, FT E-value 2.3e-184" FT /inference="protein motif:Pfam:PF00171.9" FT CDS complement(45110..45607) FT /transl_table=11 FT /locus_tag="pRL120045" FT /product="putative AsnC family transcriptional regulatory FT protein" FT /note="similarity:fasta; SWALL:LRP_ECOLI (SWALL:P19494); FT Escherichia coli, Escherichia coli O6, Escherichia coli FT O157:H7, Shigella flexneri, and Enterobacter aerogenes; FT leucine-responsive regulatory protein; lrP; length 163 aa; FT id=38.81; ungapped id=38.81; E()=2.1e-17; 152 aa overlap; FT query 3-154 aa; subject 11-162 aa" FT /note="similarity:fasta; SWALL:Q92WD1 (EMBL:AL591985); FT Rhizobium meliloti; putative transcriptional regulator FT protein; length 164 aa; id=86.45; ungapped id=86.45; FT E()=8e-53; 155 aa overlap; query 1-155 aa; subject 1-155 FT aa" FT /db_xref="GOA:Q1M558" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M558" FT /inference="similar to sequence:UniProtKB:P19494" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11759.1" FT /translation="MKLDAIDLRILDAVQRDGRITKLALAEKAGLSPTPCWMRLRKLEK FT AGIITGYHARIAPRRIAPVASVMMEVTLANHRQADFERFERAISAVPEVVSCWSVGGGV FT DYILKIIAPDIDAYQRLVDGLLDRELGIDRYFTYIVTKTVKEDTVLPVSSFTATDEEQS FT AP" FT misc_feature complement(45218..45529) FT /note="Pfam match to entry PF01037.8 AsnC_trans_reg, score FT 113.5, E-value 5.3e-31" FT /inference="protein motif:Pfam:PF01037.8" FT misc_feature complement(45485..45550) FT /note="Predicted helix-turn-helix motif with score FT 1048.000, SD 2.76 at aa 20-41, sequence FT ITKLALAEKAGLSPTPCWMRLR" FT CDS 45709..47094 FT /transl_table=11 FT /locus_tag="pRL120046" FT /product="putative MocR-type GntR family transcriptional FT regulator" FT /note="similarity:fasta; SWALL:Q92WD0 (EMBL:AL591985); FT Rhizobium meliloti; hypothetical transcriptional regulator FT protein; length 426 aa; id=84; ungapped id=84; FT E()=8.1e-136; 425 aa overlap; query 37-461 aa; subject FT 2-426 aa" FT /note="similarity:fasta; SWALL:Q987A9 (EMBL:AP003011); FT Rhizobium loti; transcriptional regulator; length 461 aa; FT id=76.35; ungapped id=76.35; E()=1.2e-134; 461 aa overlap; FT query 1-461 aa; subject 1-461 aa" FT /db_xref="GOA:Q1M557" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M557" FT /inference="similar to sequence:INSDC:AL591985" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11760.1" FT /translation="MTKWRPDPSQLRRPAYLSLAEQIANAITDGKLIDGTQLPPHRKMA FT DDLHLSVQTVSRAYDELIRRGLISGEIGRGSFVQTRPREPEPPYLPERLGEVIDLSILK FT PVCEQIHLERLRQAFGWLSENLPSSSALSFRPNMVFPRHRAVATEWLARCGLEVSPLNI FT SVTNGATSGMTVALMSVAPPGSTVATEAISHHTLVPLSTYLGLHLEGLAIDEEGMIPEA FT LDEACRKGPIRAIFLQPSVINPMAALMSAERRQALAAVAAKHDIAIIENDILGPMVEGR FT APPMAAFAPERTLYVTSFTKITVPGLRIGYLTAPDRYVAAVANRHLVSNWMATPAMAEI FT ATRWVSDGTAMELVNWQRRALLSRHAIAAEMLAGLSYRAHPQSLHVWLPLSGNHTEDGF FT VSQARLRGVAIAPGKSFHTADQGWTPAVRISLGSTTESELRTGLGIVASLAQGNPEELL FT LAI" FT misc_feature 45751..45942 FT /note="Pfam match to entry PF00392.9 GntR, score FT 32.9,E-value 9.3e-07" FT /inference="protein motif:Pfam:PF00392.9" FT misc_feature 45823..45888 FT /note="Predicted helix-turn-helix motif with score FT 1129.000, SD 3.03 at aa 53-74, sequence FT PPHRKMADDLHLSVQTVSRAYD" FT CDS 47217..48002 FT /transl_table=11 FT /locus_tag="pRL120047" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q92WC9 (EMBL:AL591985); FT Rhizobium meliloti; putative amino acid ABC transporter FT ATP-binding protein; length 261 aa; id=90.8; ungapped FT id=90.8; E()=2.6e-80; 261 aa overlap; query 1-261 aa; FT subject 1-261 aa" FT /db_xref="GOA:Q1M556" FT /db_xref="InterPro:IPR014343" FT /db_xref="UniProtKB/TrEMBL:Q1M556" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11761.1" FT /translation="MLPPIIRIDNIVKKYGPLTVLDGLSMNVMPGEKLALIGPSGSGKT FT TILRILMTLETISGGHIEVDGEQLYHIPGSSGLVPADERHLHRMREKIGMVFQHFNLFP FT HKCVLDNVTLAPMLTKGIKRPVAEKRAMELLDMVGLADKAKSVPAQLSGGQKQRVAIAR FT ALALSPKIMLFDEVTSALDPELVEEVLNVMRRLASETDMTMLLVTHEMGFAHDFADRVL FT FFDRGKIVEEGKPGDIFRNPTQERTQTFLRKIIAAGHRI" FT misc_feature 47307..47897 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 217.3, E-value 2.9e-62" FT /inference="protein motif:Pfam:PF00005.11" FT CDS 48059..48907 FT /transl_table=11 FT /locus_tag="pRL120048" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q92WC8 (EMBL:AL591985); FT Rhizobium meliloti; putative ABC transporter amino FT acid-binding protein; length 283 aa; id=85.76; ungapped FT id=85.76; E()=2.3e-85; 274 aa overlap; query 7-280 aa; FT subject 9-282 aa" FT /db_xref="GOA:Q1M555" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q1M555" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11762.1" FT /translation="MKTGYFLCAASLSVLLVTAVAPASAADDKLEQLKEQGFARIAIAN FT EPPFTAVGADGKVSGAAPDVARAIFEKLGVKEVVASISEYGAMIPGLQAGRHDAITAGL FT FMKPERCNAVAYSEPILCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEEKLA FT LEAGVPRDRVIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNA FT PVYCDGAAFRKQDVALRDAFDVELKKLKESGEFAKIIEPYGFSAKAAMSTSREKLCAAA FT K" FT sig_peptide 48059..48133 FT /locus_tag="pRL120048" FT /note="Signal peptide predicted for pRL120048 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.930 between residues 25 and 26" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 48173..48856 FT /note="Pfam match to entry PF00497.8 SBP_bac_3, score FT 189.0, E-value 9.8e-54" FT /inference="protein motif:Pfam:PF00497.8" FT CDS 49082..49747 FT /transl_table=11 FT /locus_tag="pRL120049" FT /product="putative permease component of ABC transporter FT protein" FT /note="similarity:fasta; SWALL:Q92WC7 (EMBL:AL591985); FT Rhizobium meliloti; putative amino acid ABC transporter FT permease protein; length 219 aa; id=83.72; ungapped FT id=83.72; E()=2e-68; 215 aa overlap; query 6-220 aa; FT subject 4-218 aa" FT /db_xref="GOA:Q1M554" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1M554" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11763.1" FT /translation="MPMSVWSGYLTLILEGALVTLELTIMGSALALVMAFLAGLGRLSR FT FFAVRALATAYIEFFRGTSIFVQLFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYAAEV FT VRGAVKAVGREQSEACIALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSL FT ISLTDMTFQAQVVRAQTGNTLVPFATILILYFLMASAISATMRWLERRMARSLDGIRT" FT misc_feature 49118..49723 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 109.1, E-value 1e-29" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature order(49133..49201,49286..49354,49628..49696) FT /locus_tag="pRL120049" FT /note="3 probable transmembrane helices predicted at aa FT 18-40, 69-91 and 183-205" FT /inference="protein motif:TMHMM:2.0" FT CDS 49752..50411 FT /transl_table=11 FT /locus_tag="pRL120050" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q987A5 (EMBL:AP003011); FT Rhizobium loti; amino acid ABC transporter protein,permease FT protein; length 219 aa; id=79.35; ungapped id=79.35; FT E()=2.8e-66; 218 aa overlap; query 1-218 aa; subject 1-218 FT aa" FT /db_xref="GOA:Q1M553" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1M553" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11764.1" FT /translation="MEWDWDFVWQIMPTLLEGFKITLLATILGAAVAMIVGLALAIARR FT SPVAGVSRTVGFVSEFIRGTPLLVQLYFIFYVLPDIGIRLAPLVAGVIGMGIHYATYTA FT EVYRAGIENVPRGQWEAAKATNLSTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLL FT SAITVLELMNQAKSIANSNYRYIEPMTLVGIFFLVISLISVVGLRWLEERYARMDD" FT misc_feature 49794..50399 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 109.7, E-value 7.1e-30" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature order(49809..49877,49914..49982,49992..50060,50148..50216, FT 50304..50372) FT /locus_tag="pRL120050" FT /note="5 probable transmembrane helices predicted at aa FT 20-42, 55-77, 81-103, 133-155 and 185-207" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 50097..50162 FT /note="Predicted helix-turn-helix motif with score FT 1124.000, SD 3.02 at aa 116-137, sequence FT RGQWEAAKATNLSTRQAWIHVI" FT CDS 50414..51193 FT /transl_table=11 FT /locus_tag="pRL120051" FT /product="putative arylmalonate decarboxylase" FT /EC_number="4.1.1.76" FT /note="From codon 75, similar to codons 65 to the FT C-terminus of Bordetella bronchiseptica arylmalonate FT decarboxylase SWALL:AMDA_BORBR (SWALL:Q05115) (240 aa), and FT to Rhizobium meliloti hypothetical arylmalonate FT decarboxylase protein SWALL:Q92WC5 (EMBL:AL591985) (261 FT aa)" FT /note="similarity:fasta; SWALL:AMDA_BORBR (SWALL:Q05115); FT Bordetella bronchiseptica; arylmalonate decarboxylase; FT length 240 aa; id=30; ungapped id=32.14; E()=3.7e-08; 180 FT aa overlap; query 76-251 aa; subject 65-236 aa" FT /note="similarity:fasta; SWALL:Q92WC5 (EMBL:AL591985); FT Rhizobium meliloti; hypothetical arylmalonate decarboxylase FT protein; length 261 aa; id=77.51; ungapped id=77.51; FT E()=5.6e-72; 258 aa overlap; query 1-258 aa; subject 1-258 FT aa" FT /db_xref="GOA:Q1M552" FT /db_xref="InterPro:IPR014332" FT /db_xref="UniProtKB/TrEMBL:Q1M552" FT /inference="similar to sequence:UniProtKB:Q05115" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11765.1" FT /translation="MTVEIEIITAGRPPRLEDRPLEKRIGLVILATDHTTEVDFQRMVA FT SDRLGVYVSRIHYANPVTPENLLRMQPSLTEGAALILPGETLDAIVYSCTSASVVIGDR FT NIEAAIHAAKPGVPVVTPTAAAVKGLKALGARRISVLTPYTIETSRPMADYFADLGFAI FT DRFTCLGLTDDREMARIAPDEILAFARQALAPHSDALFISCTAVRAAEVAARIEAEIGK FT PVVTSNLATAWACLRLCGDDLARPELGQLMTKPYREG" FT misc_feature 50483..51133 FT /note="Pfam match to entry PF01177.8 Asp_Glu_race, score FT 104.4, E-value 2.8e-28" FT /inference="protein motif:Pfam:PF01177.8" FT CDS 51198..52199 FT /transl_table=11 FT /gene="tdcB" FT /locus_tag="pRL120052" FT /product="putative threonine dehydratase" FT /EC_number="4.3.1.19" FT /note="similarity:fasta; SWALL:THD2_ECOLI (SWALL:P05792); FT Escherichia coli, Escherichia coli O6, Escherichia coli FT O157:H7, and Shigella flexneri; threonine dehydratase FT catabolic; tdcB; length 329 aa; id=38.97; ungapped FT id=39.61; E()=5.4e-33; 313 aa overlap; query 5-314 aa; FT subject 7-317 aa" FT /note="similarity:fasta; SWALL:Q92WC4 (EMBL:AL591985); FT Rhizobium meliloti; putative threonine dehydratase protein; FT length 334 aa; id=74.39; ungapped id=74.62; E()=1.6e-78; FT 332 aa overlap; query 1-331 aa; subject 1-332 aa" FT /db_xref="GOA:Q1M551" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:Q1M551" FT /inference="similar to sequence:UniProtKB:P05792" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11766.1" FT /translation="MVSTLPVSLEDIRAAARRIAGRVIGTPMVQSFSLGELAGVPVHLK FT LEHHQTTGSFKLRGATNAVLSLSPAERSRGVVAASTGNHGRALAYAAKAEGAVATICMS FT RLVPDNKVSESRRLGADVRIVGGSQDEAQQEVERLVREEGLVMVPPFDHPDVVAGQGTL FT GLEIIDILPEAAIVLVPLSGGGLAAGVAAAVKGISPTTKVIGLTMEKGAAMKASLDAGR FT PVQVEEVSSLADSLGGGIGLDNRVTFAMCRELLDDVILLTEVEIAVGMRHAYACERQIV FT EGAGAVGIAALLAGKIVGNGPIVAILSGANVDMEQHRRVINGKAALCGEERP" FT misc_feature 51252..52127 FT /note="Pfam match to entry PF00291.10 PALP, score FT 220.7,E-value 2.7e-63" FT /inference="protein motif:Pfam:PF00291.10" FT CDS 52196..53188 FT /transl_table=11 FT /gene="arcB" FT /locus_tag="pRL120053" FT /product="putative ornithine cyclodeaminase" FT /note="similarity:fasta; SWALL:Q44332 (EMBL:U39262); FT Agrobacterium tumefaciens; ornithine cyclodeaminase; arcB; FT length 351 aa; id=31.61; ungapped id=33.46; E()=3.1e-13; FT 272 aa overlap; query 62-329 aa; subject 66-326 aa" FT /note="similarity:fasta; SWALL:OCD1_RHIME (SWALL:P58338); FT Rhizobium meliloti; ornithine cyclodeaminase 1; ocd1; FT length 329 aa; id=80.3; ungapped id=80.54; E()=2.1e-89; 330 FT aa overlap; query 1-330 aa; subject 1-329 aa" FT /db_xref="GOA:Q1M550" FT /db_xref="InterPro:IPR003462" FT /db_xref="UniProtKB/TrEMBL:Q1M550" FT /inference="similar to sequence:INSDC:U39262" FT /inference="similar to sequence:UniProtKB:P58338" FT /protein_id="CAK11767.1" FT /translation="MSRMIILTEAELRKVIALDRDTVDCVEAAFAALATKAVAMPPILR FT LDIPEYRGEVDVKTAYVPGIEGFAIKISPGFFDNPKIGLPSTNGMMVLLSSRTGLVQAL FT LLDNGYLTDVRTAAAGAVAAKHLSRESASVAAIFGAGMQARLQLEALTLVRPIREARIW FT ARDAAKAQSVAAELAGKLGFPITATSDARGAVIGADLIVTTTPSEIPIIEAGWLEPGQH FT LTAMGSDAEHKNEIDPAAIAAADLYVADSLKQTRRLGELHHAIDAGLVAGDAVFAELGQ FT IVAGRTPGRTRNDQITIADLTGTGIQDTAIATLAFARAGAVKAGTAFES" FT misc_feature 52199..53164 FT /note="Pfam match to entry PF02423.5 OCD_Mu_crystall, score FT 442.1, E-value 6e-130" FT /inference="protein motif:Pfam:PF02423.5" FT CDS 53221..54402 FT /transl_table=11 FT /locus_tag="pRL120054" FT /note="similarity:fasta; SWALL:CREA_BACB0 (SWALL:P38487); FT Bacillus sp.; creatinase; length 410 aa; id=24.87; ungapped FT id=27.7; E()=5.3e-12; 402 aa overlap; query 5-386 aa; FT subject 20-400 aa" FT /note="similarity:fasta; SWALL:Q92WC3 (EMBL:AL591985); FT Rhizobium meliloti; putative hydrolasepeptidase protein; FT length 393 aa; id=93.13; ungapped id=93.13; E()=3.8e-152; FT 393 aa overlap; query 1-393 aa; subject 1-393 aa" FT /db_xref="GOA:Q1M549" FT /db_xref="InterPro:IPR001202" FT /db_xref="UniProtKB/TrEMBL:Q1M549" FT /inference="similar to sequence:UniProtKB:P38487" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11768.1" FT /translation="MTQPKLKFSLGEYAARLEKTRRAMEAKGVDLLIVSDPSNMAWLTG FT YDGWSFYVHQAVIVPPQGEPIWFGRGQDANGAKFTAYLKHDNIVGYPDHYVQSTERHPM FT DYLSGILTERGFGKLTIGVEMDNYWFSAAAFAALQKHLPNARFVDATALVNWQRAVKSE FT TEIGYMRNAARIVEAMHARIFDKIEVGMRKCDLVAEIYDAGTRGVDGIGGDYPAIVPLL FT PSGVEASAPHLTWDDRPLKKGEGTFFEIAGCYNRYHLPLSRTVFLGKPTQAFLDAEKAT FT LEGMEAGLAVARPGNSCEDIANAFFAVLKKYGIVKDNRTGYPIGLSYPPDWGERTMSLR FT PGDRTELKPGMTFHFMTGLWLEDMGFETTESILITDSGVECFANVPRRLMVKD" FT misc_feature 53719..54372 FT /note="Pfam match to entry PF00557.9 Peptidase_M24, score FT 12.6, E-value 7.3e-08" FT /inference="protein motif:Pfam:PF00557.9" FT CDS 54410..55417 FT /transl_table=11 FT /locus_tag="pRL120055" FT /product="putative AstE/AspA family protein" FT /note="similarity:fasta; SWALL:Q92WC2 (EMBL:AL591985); FT Rhizobium meliloti; hypothetical protein smb20435; length FT 331 aa; id=77.37; ungapped id=77.37; E()=4.6e-101; 327 aa FT overlap; query 6-332 aa; subject 1-327 aa" FT /db_xref="GOA:Q1M548" FT /db_xref="InterPro:IPR014336" FT /db_xref="UniProtKB/TrEMBL:Q1M548" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11769.1" FT /translation="MTEIGLRPSPISATVNFAAEGVQHGFLRLPYSRDDSAWGSVMVPI FT TVIRNGKGPTALLTGGNHGDEYEGPIALFDLARSLKAEEVKGTVIIVPAMNYPAFQAGT FT RTSPIDRGNMNRSFPGRPDGTVTEKIADYFSRVLLPMADLVLDFHSGGKTLDFLPFCAA FT HILPNKQQETKAFEFVTAFAAPYSMKMLEIDAVGMYDTAAEEMGKVFITTELGGGGTAT FT AKSAAIAKRGTMNVLRHAGIVAGAVDPGSTTWLDMPDGRCFSFAEEGGLIEPVIDLSEA FT VTADAVIARIYPTGRTGLAPREIRAGMNGILCARHFPGLVKAGDCVAVVAIVTG" FT misc_feature 54563..55408 FT /note="Pfam match to entry PF04952.4 AstE_AspA, score FT 389.2, E-value 5.1e-114" FT /inference="protein motif:Pfam:PF04952.4" FT CDS complement(55461..57380) FT /transl_table=11 FT /locus_tag="pRL120056" FT /product="putative methylation accepting chemotaxis FT protein" FT /note="Codons 275 to the C-terminus are similar to codons FT 105 to 465 of Rhizobium leguminosarum methylation accepting FT chemotaxis protein mcpD SWALL:P95626 (EMBL:U81828) (624 FT aa), and to Caulobacter crescentus methyl-accepting FT chemotaxis protein mcpl SWALL:Q9A348 (EMBL:AE005997) (597 FT aa)" FT /note="similarity:fasta; SWALL:P95626 (EMBL:U81828); FT Rhizobium leguminosarum; methylation accepting chemotaxis FT protein; mcpD; length 624 aa; id=47.33; ungapped id=48.75; FT E()=7.1e-51; 412 aa overlap; query 235-639 aa; subject FT 188-594 aa" FT /note="similarity:fasta; SWALL:Q9A348 (EMBL:AE005997); FT Caulobacter crescentus; methyl-accepting chemotaxis protein FT mcpl; length 597 aa; id=42; ungapped id=42.66; E()=2.1e-70; FT 588 aa overlap; query 48-632 aa; subject 13-594 aa" FT /db_xref="GOA:Q1M547" FT /db_xref="InterPro:IPR004089" FT /db_xref="UniProtKB/TrEMBL:Q1M547" FT /inference="similar to sequence:INSDC:U81828" FT /inference="similar to sequence:INSDC:AE005997" FT /protein_id="CAK11770.1" FT /translation="MPKELTISQCSCEIMPYVDQASRSREAKSYLEAVLALTIARSLVA FT FGVAVSAGLFMSIGLQQSALERLKVNGPVYEQVVYGKDLIADILPPPLFVVESYMLSFE FT ASKFPELTETNLAKIANLKAAYDDRRAYWKTTRLPQALKDELENDVIAKGDTFWGVMNR FT EIIPALNARDEDKAHGAIEQLRVAFHSHQDAVEKLVANSDAFLKGEERNAASEIVTWTI FT YAGAAGLGSFGLLLVGLYLLRRRAIVPLDGMKAYMGNLAEGDFSTEVPYANRSDEIGAM FT SKAVAVFRRNALERQEAQKRETALRDAEFERERSQLAERAAEEQIRETVIDRLTYGLEQ FT LSTGNLDCRIKTPFAAAYETLRAKFNDSMDALCASMAEIAQTSKQVGSSSAGITDAADS FT LASRTEQQAAMLEEATAALDEMNIKAKDASDHAGRATGMMAETRTSAEHSAAVVREAIA FT AMERIEGSSSQIGDIVNVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAM FT RSANAAKEIRSLISTSSAQVSTGVELVNRTGKALLEIEGQVEQVAGLIARIVSVSSEQA FT VAIGEINASVNALDQVTQRNAAMAVETASACRALGSQTQTLEGVVNRFQVDAGASTSRA FT QKAA" FT misc_feature complement(55500..56168) FT /note="Pfam match to entry PF00015.9 MCPsignal, score FT 250.2, E-value 3.5e-72" FT /inference="protein motif:Pfam:PF00015.9" FT misc_feature complement(56499..56711) FT /note="Pfam match to entry PF00672.10 HAMP, score FT 43.5,E-value 5.8e-10" FT /inference="protein motif:Pfam:PF00672.10" FT misc_feature complement(join(56655..56723,57201..57269)) FT /locus_tag="pRL120056" FT /note="2 probable transmembrane helices predicted at aa FT 38-60 and 220-242" FT /inference="protein motif:TMHMM:2.0" FT CDS 57726..58136 FT /transl_table=11 FT /locus_tag="pRL120057" FT /product="putative plasmid stability protein" FT /note="similarity:fasta; SWALL:STBB_PSESM (SWALL:Q52562); FT Pseudomonas syringae; plasmid stability protein; stbB; FT length 139 aa; id=37.58; ungapped id=40.15; E()=3e-10; 141 FT aa overlap; query 1-135 aa; subject 1-138 aa" FT /note="similarity:fasta; SWALL:Q7D441 (EMBL:AE007874); FT Agrobacterium tumefaciens; agr_pat_21p; length 137 aa; FT id=83.94; ungapped id=84.55; E()=1.3e-41; 137 aa overlap; FT query 1-136 aa; subject 1-137 aa" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:Q1M546" FT /inference="similar to sequence:UniProtKB:Q52562" FT /inference="similar to sequence:INSDC:AE007874" FT /protein_id="CAK11771.1" FT /translation="MIFLDTNVISETLKKSPDEAVIAWLVRHDAELALPTVTIAEIAFG FT IQKIRDQRAERLEQGLSDWRRRFADRIFGLTEEAALAYGDIMGLAARQGRGMSAPDGMI FT AAIARVNGGRLATRDLGDFATTGLELISPWQF" FT misc_feature 57729..58124 FT /note="Pfam match to entry PF01850.8 PIN, score FT 90.6,E-value 4.1e-24" FT /inference="protein motif:Pfam:PF01850.8" FT CDS complement(58177..58635) FT /transl_table=11 FT /locus_tag="pRL120058" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q1M545" FT /protein_id="CAK11772.1" FT /translation="MFMRILLRVIPGRVCRLANGSAPHPLANRLIFNRSDTVKPMFLSH FT RRNGPSGRLDGAIRTEPSSPKRNQELFLLEREPDMSLEMDEPTIVATWENRAQIIEIMS FT SARTMSQEFQDLWNSSGGTGRLSQENTDRLVELLREISGLNEKLLRLA" FT CDS complement(58681..59760) FT /transl_table=11 FT /locus_tag="pRL120059" FT /product="conserved hypothetical exported protein" FT /note="Similar, but truncated at the C-terminus, to FT Bradyrhizobium japonicum blr4318 protein SWALL:Q89M75 FT (EMBL:AP005950) (405 aa)" FT /note="similarity:fasta; SWALL:Q89M75 (EMBL:AP005950); FT Bradyrhizobium japonicum; blr4318 protein; length 405 aa; FT id=36.18; ungapped id=38.98; E()=2.4e-19; 362 aa overlap; FT query 6-358 aa; subject 7-351 aa" FT /db_xref="UniProtKB/TrEMBL:Q1M544" FT /inference="similar to sequence:INSDC:AP005950" FT /protein_id="CAK11773.1" FT /translation="MTPSAISRRQFLLAGIALQVLGPKIAAAQPTGTSDHGIGGSGLSI FT QGGGENEDHGIGGTGIVGTIQGFGSIIVNNIHIPFSATTPIEIDGRRVRASAMKVGHVA FT RVLLTGKLAARITIASEVQGRIDRINKTGMTVLGQTIDTTGVATKGLRKGKRVAVFGIR FT KPDGTIIARRIEPRSVSEGAHVRGIPVKSSNRVLIGGLSLGSTHGYLAGKQTLVRLKAV FT ADRLIITRIQAEPLVPGLKHGIVNVETFRPTDKDRPGAGPGGSAPFGSGPPSPDGHGFV FT DVGVRDSSRMTGFPDGRIPDGFGSRRPGGPSDRPPPDRSPFGRGGPDRDFPAPDRGGPP FT PQDGPPPGPPPPGPGPGPR" FT sig_peptide complement(59677..59760) FT /locus_tag="pRL120059" FT /note="Signal peptide predicted for pRL120059 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.960) with cleavage FT site probability 0.604 between residues 28 and 29" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(59757..60650) FT /transl_table=11 FT /locus_tag="pRL120060" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q89M76 (EMBL:AP005950); FT Bradyrhizobium japonicum; blr4317 protein; length 336 aa; FT id=44.87; ungapped id=45.52; E()=2.6e-43; 283 aa overlap; FT query 19-297 aa; subject 50-332 aa" FT /db_xref="UniProtKB/TrEMBL:Q1M543" FT /inference="similar to sequence:INSDC:AP005950" FT /protein_id="CAK11774.1" FT /translation="MVFQRPSVFLMSKPRTKLPFSEETLQAMLIRVLRPLVKLALASGF FT NFIAFSTVLRRLYIEVAEKEFALPNKSQTDSRISLLTGIHRKDVNRLRGQVLAASFLTT FT GVSQTSRILARWLADPFYCDAEDRPSALPRTSSDGGPSFESLVSDITKDVHPRSILDDW FT LDKGIVVVDQNGWIQLDLSSIVPNAGDEARRHYFTRNLRDHVQASVMNLMNEPPPNFER FT AVHYDGISPVLAARLDEIARAEGMALLLKLNKIAHQAIKDDPGGNSRWIAGLYVMTEEG FT EADLQADTASKTETDE" FT CDS complement(60806..61180) FT /transl_table=11 FT /locus_tag="pRL120061" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q1M542" FT /protein_id="CAK11775.1" FT /translation="MREFKQLQIPALTKEPNTTCSEIVAEAAFALASGIIDTIPFVGSK FT LDEQQTRAWPRSGVFTDDGVEMTATPPEIFELCELLAAHVEKGTSFDVFEVFHKIARID FT RLIDWRHGAVLSPEPHPVTH" FT CDS complement(61192..62238) FT /transl_table=11 FT /gene="flgL" FT /locus_tag="pRL120062" FT /product="putative flagellar hook associated protein" FT /note="similarity:fasta; SWALL:Q92RZ1 (EMBL:AL591784); FT Rhizobium meliloti; putative flagellar hook-associated FT protein; flgL; length 345 aa; id=41.83; ungapped id=42.44; FT E()=1.8e-41; 349 aa overlap; query 1-348 aa; subject 1-345 FT aa" FT /db_xref="GOA:Q1M541" FT /db_xref="InterPro:IPR009831" FT /db_xref="UniProtKB/TrEMBL:Q1M541" FT /inference="similar to sequence:INSDC:AL591784" FT /protein_id="CAK11776.1" FT /translation="MKASFVSSSAMQNVLRLTISQSQNKLQQASTEATTGTYADSGVSL FT GAGAAKSINLTSAIAQAASFKMSNAVVELRMNASQTALSSLKDAGDSLVSNLTALQASQ FT DTTSIAVALQTASATISQLVSTANTSVNGEFLFGGTNLDSQPLSDQSSAVSDTIVSALN FT DYATGLGKDVSELTGEEIGSFITDTVEPMFSESAWTDASEGWSAASSTNMTSRISGSET FT ITSSTNANSEGMRYLALASVVVSALFGQDLSSDAQSTVASKAIAYAAQATSGIVTQQSE FT LGLAQERLEKANDALDAQSTLLQGNLVDLQGVDTYEASTLVNQLQTQLETAYTLVSKLQ FT SLSLVNYL" FT misc_feature complement(61192..62238) FT /note="Pfam match to entry PF07164.1 HAP3, score FT 328.7,E-value 8.1e-96" FT /inference="protein motif:Pfam:PF07164.1" FT CDS complement(62241..63701) FT /transl_table=11 FT /gene="flgK" FT /locus_tag="pRL120063" FT /product="putative flagellar hook-associated protein" FT /note="similarity:fasta; SWALL:FLGK_BACSU (SWALL:P39810); FT Bacillus subtilis; flagellar hook-associated protein 1; FT flgK; length 507 aa; id=21.69; ungapped id=24.17; FT E()=4.6e-09; 507 aa overlap; query 2-483 aa; subject 21-500 FT aa" FT /note="similarity:fasta; SWALL:Q8UHV4 (EMBL:AE009026); FT Agrobacterium tumefaciens; hook associated protein i FT homolog; flgK; length 492 aa; id=49.39; ungapped id=50.41; FT E()=3.9e-76; 492 aa overlap; query 1-484 aa; subject 1-490 FT aa" FT /db_xref="GOA:Q1M540" FT /db_xref="InterPro:IPR010930" FT /db_xref="UniProtKB/TrEMBL:Q1M540" FT /inference="similar to sequence:UniProtKB:P39810" FT /inference="similar to sequence:INSDC:AE009026" FT /protein_id="CAK11777.1" FT /translation="MSLTSALNNVQSIFNTTGQQSSVISTNIANVGNSDYVRREASVTT FT SLSGAQVVSISRAQETALLAQYLQTNAKDSAQQTLVTGLESLKSLVGGNDYETSPSTYL FT TAFQQALQTFGTSPSSTTAAQSAVTAAQDLANSLNTASDGVQSIRAEADAEIATQVSTL FT NTLLSQFEAANNAVKLATSTGTDTSSALDEREKLLKQISSIVGVTSTVRDNNDMALYTS FT DGTVLFETIPRTVTFAPTATYVAGTEGNSIYIDGVALDAGEGSTTSASGSLQALLQLRD FT EIAPTFQAQLDEIAKSLVQIFSETDGSTSAPGLFVWTTASGATGATPAASDDATGIAST FT ISVNLAVVTSEGGDATKLRDGSISGITDLNTSGDSGFSDNLDALYEALTEQRSFSSDAG FT LSTSQSLTDYASASIGWLEQYRSDATSASETTAAALSRSDEAYSNETGVNLDEELTLLL FT DIEQSYKAATKILNVIDEMFQSLLDIAS" FT misc_feature complement(62250..62366) FT /note="Pfam match to entry PF06429.1 DUF1078, score 51.3, FT E-value 2.7e-12" FT /inference="protein motif:Pfam:PF06429.1" FT CDS complement(63715..65007) FT /transl_table=11 FT /gene="flgE" FT /locus_tag="pRL120064" FT /product="putative flagellar hook protein flgE" FT /note="similarity:fasta; SWALL:FLGE_RHIME (SWALL:Q9X5Y0); FT Rhizobium meliloti; flagellar hook protein FlgE; flgE; FT length 406 aa; id=50.9; ungapped id=57.1; E()=4.5e-32; 442 FT aa overlap; query 1-430 aa; subject 1-406 aa" FT /note="similarity:fasta; SWALL:Q7D172 (EMBL:AE007992); FT Agrobacterium tumefaciens; agr_c_1012p; length 425 aa; FT id=53.06; ungapped id=56.52; E()=8.4e-62; 441 aa overlap; FT query 1-430 aa; subject 1-425 aa" FT /db_xref="GOA:Q1M539" FT /db_xref="InterPro:IPR010930" FT /db_xref="UniProtKB/TrEMBL:Q1M539" FT /inference="similar to sequence:UniProtKB:Q9X5Y0" FT /inference="similar to sequence:INSDC:AE007992" FT /protein_id="CAK11778.1" FT /translation="MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSS FT LVLPSSSGNYNSGGVQTSVRQAISQQGDISYTTSAYDLAISGDGFFIVESADGTPVLTR FT AGDFSVDSDGNLVNGAGFTLMGYSYDSGVPAVVVNGFDGLVPVNVSQSGLSAIASSSAY FT FSGNLNSEATVVTNTTTLPSANTASVTDDTQKMSLVAYDSLGGTVQYDYYFTKTGVTTD FT ASGAVTGSTWEVAVYRNADAATGSTTSFPYSSDAVSVATLSFDADGQLTSATDTDIVDP FT VTAKTVTMDYSDFTQLASDFSATGSADGQAASAVSSVSIGADGVVSVSYANGATKALYQ FT IPLATVASPDNLTLLSGNVYSANGLSGVTVTGFPQTNGLGSIQSGALESSNVDLAGELT FT EMIEAQRSYTANSKVFQTGSDIMDVLVNLKR" FT misc_feature complement(63724..63840) FT /note="Pfam match to entry PF06429.1 DUF1078, score 69.2, FT E-value 1.1e-17" FT /inference="protein motif:Pfam:PF06429.1" FT misc_feature complement(64078..64449) FT /note="Pfam match to entry PF07559.1 FlaE, score FT 40.8,E-value 4e-09" FT /inference="protein motif:Pfam:PF07559.1" FT misc_feature complement(64897..64989) FT /note="Pfam match to entry PF00460.8 Flg_bb_rod, score FT 56.4, E-value 8e-14" FT /inference="protein motif:Pfam:PF00460.8" FT CDS complement(65328..66179) FT /transl_table=11 FT /locus_tag="pRL120065" FT /product="putative symbiosis-related calsymin" FT /note="similarity:fasta; SWALL:Q9F6V9 (EMBL:AF288533); FT Rhizobium etli; calsymin; casA; length 293 aa; id=79.03; FT ungapped id=81.56; E()=1e-52; 291 aa overlap; query 1-282 FT aa; subject 1-291 aa" FT /db_xref="GOA:Q1M538" FT /db_xref="InterPro:IPR003299" FT /db_xref="UniProtKB/TrEMBL:Q1M538" FT /inference="similar to sequence:INSDC:AF288533" FT /protein_id="CAK11779.1" FT /translation="MTTISAATSVSSYSYSKYPTSASEEILSSNTVSSAKATKSGQLDE FT DTSSSADKLLSQLMTLSMNRFSDQSVSGEDEDGGEGMDVAQLDSDGDGYVTKAEFVAAR FT PSDVTEDQANTLFGSFDSESTGSLSVDVLAEAMSAQQSQRPGGDDLASLLSDLDTDGDG FT SISKDEFVAGRPSDVTEDQAGTLFDSFDSEGAGSLSVDELTEAMSAEQSQRSEGPPPPP FT PAEDDESQSLLSDLDTNGDGLVTLDEFMAGKPEDVTESQASQLFSLLDTSDTGSLSVQS FT AG" FT misc_feature complement(65412..65498) FT /note="Pfam match to entry PF00036.15 efhand, score 14.9, FT E-value 0.24" FT /inference="protein motif:Pfam:PF00036.15" FT misc_feature complement(65550..65636) FT /note="Pfam match to entry PF00036.15 efhand, score 13.7, FT E-value 0.35" FT /inference="protein motif:Pfam:PF00036.15" FT misc_feature complement(65649..65735) FT /note="Pfam match to entry PF00036.15 efhand, score 21.3, FT E-value 0.0029" FT /inference="protein motif:Pfam:PF00036.15" FT misc_feature complement(65760..65846) FT /note="Pfam match to entry PF00036.15 efhand, score FT 7.5,E-value 1.8" FT /inference="protein motif:Pfam:PF00036.15" FT misc_feature complement(65859..65945) FT /note="Pfam match to entry PF00036.15 efhand, score FT 3.3,E-value 5.4" FT /inference="protein motif:Pfam:PF00036.15" FT CDS 66344..66991 FT /transl_table=11 FT /locus_tag="pRL120066" FT /product="putative TetR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q9F6W0 (EMBL:AF288533); FT Rhizobium etli; CasR; length 214 aa; id=76.28; ungapped FT id=78.3; E()=1.8e-50; 194 aa overlap; query 1-190 aa; FT subject 1-193 aa" FT /db_xref="GOA:Q1M537" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q1M537" FT /inference="similar to sequence:INSDC:AF288533" FT /protein_id="CAK11780.1" FT /translation="MDIIDEPADEPRKRGRPKVSSDEDKRAHIVEVAGRVFVKYGYAGS FT TTAIVASEAGVSKQTLYKLFQSKEELFAAVVGAHRRLMLDLPRPAEDISIAASLERIFM FT IDMDEDKDADRTGFLQLVFREAAQFPELVDILQREGMLASRQHLADWLSERRSEGRLTL FT DDTASGARMLMDMILGGMGPPEGRAQAWPDRAQLFAHLRRCIAIFAAGVGAT" FT misc_feature 66428..66568 FT /note="Pfam match to entry PF00440.8 TetR_N, score FT 61.1,E-value 3.1e-15" FT /inference="protein motif:Pfam:PF00440.8" FT misc_feature 66476..66541 FT /note="Predicted helix-turn-helix motif with score FT 1631.000, SD 4.74 at aa 45-66, sequence FT STTAIVASEAGVSKQTLYKLFQ" FT CDS 67233..69416 FT /transl_table=11 FT /locus_tag="pRL120067" FT /product="putative flagella associated protein" FT /note="Similar to Agrobacterium tumefaciens flad FT SWALL:O34169 (EMBL:U95165) (211 aa), and to Agrobacterium FT tumefaciens agr_c_1161p SWALL:Q7D105 (EMBL:AE007999) (812 FT aa)" FT /note="similarity:fasta; SWALL:O34169 (EMBL:U95165); FT Agrobacterium tumefaciens; flad; length 211 aa; id=41.2; FT ungapped id=42.99; E()=3.3e-21; 216 aa overlap; query FT 514-727 aa; subject 1-209 aa" FT /note="similarity:fasta; SWALL:Q7D105 (EMBL:AE007999); FT Agrobacterium tumefaciens; agr_c_1161p; length 812 aa; FT id=36.39; ungapped id=43.63; E()=3.1e-48; 838 aa overlap; FT query 1-726 aa; subject 1-811 aa" FT /db_xref="GOA:Q1M536" FT /db_xref="InterPro:IPR010626" FT /db_xref="UniProtKB/TrEMBL:Q1M536" FT /inference="similar to sequence:INSDC:U95165" FT /inference="similar to sequence:INSDC:AE007999" FT /protein_id="CAK11781.1" FT /translation="MVSTYVSYLTVARNLNASLSNVASQATVARDSAYYKENIDKVTTV FT DEFMSDYKLYSYAMKAYGLEDMTYAKAFMKKVLESDLSDSSSFANSLSDTRYAEFAAAF FT KFAGETKTAQSDVQRDNLLDAYEESFDTEAGDIADATDYFEDNISSITSVDDLLSSSKL FT KNYVLTAFGLSTEYTSSSFLKSVLTSDLDETDSFVNQLDDEVYVNLSKAFNFNEDGLTD FT GDVMSEDQISLVTSAYAVASATIASSETGEAYDTYFAAQIGNITSVDELMSDDKLVSYL FT RTAYGLTDSETDNFISAALKSADIADAIGLSELHDAFNFDEDGALADGDTAQTSEQTAA FT TTAAFDENYEVLIANTDTEDAVDNYTTRIASVTSIDDFLVSNDDDDDDDNDDLPELWEM FT ALRAYDIDPDSVSRSEVRKILESDPSDSKSYVNSLDDDRFVAFRKAFNFDDNGDVTVPL FT QAMSESVVDDYATYYKQNKIRYLEGDEMTEATDAADEGITYFREQMATITTASEFLADD FT RLVSFVLEAKGLDPDDVTSDALEEMFASDLDDEDSYVNKLDDNRFAELVGAFNFDQDGN FT ISAEPTGTVQQRGDVLETIDAYVRLTLEDDQGDSNTGVRLALYFQRKAPEISSAYDILG FT DSALFEFFTTSFNLSSYVSNMDVDKQAEMIDNFIDIEDLSDPDKVDDLIKRFTAMYDMA FT NGTGTTSTALSILTGSATISADTLLAMAQLKSG" FT misc_feature 67395..67826 FT /note="Pfam match to entry PF06748.1 DUF1217, score 174.9, FT E-value 1.7e-49" FT /inference="protein motif:Pfam:PF06748.1" FT misc_feature 68430..68594 FT /note="Pfam match to entry PF06748.1 DUF1217, score 47.6, FT E-value 4.2e-13" FT /inference="protein motif:Pfam:PF06748.1" FT misc_feature 68790..69275 FT /note="Pfam match to entry PF06748.1 DUF1217, score 233.5, FT E-value 3.9e-67" FT /inference="protein motif:Pfam:PF06748.1" FT CDS 69629..71422 FT /transl_table=11 FT /gene="mcpA" FT /locus_tag="pRL120068" FT /product="putative methyl-accepting chemotaxis protein" FT /note="similarity:fasta; SWALL:O68016 (EMBL:AF010180); FT Agrobacterium tumefaciens; McpA; length 579 aa; id=81.81; FT ungapped id=81.81; E()=1.9e-159; 572 aa overlap; query FT 3-574 aa; subject 1-572 aa" FT /note="similarity:fasta; SWALL:Q8U611 (EMBL:AE009432); FT Agrobacterium tumefaciens; methyl-accepting chemotaxis FT protein; mcpA; length 584 aa; id=81.99; ungapped id=81.99; FT E()=1.1e-159; 572 aa overlap; query 3-574 aa; subject 6-577 FT aa" FT /db_xref="GOA:Q1M535" FT /db_xref="InterPro:IPR000700" FT /db_xref="UniProtKB/TrEMBL:Q1M535" FT /inference="similar to sequence:INSDC:AF010180" FT /inference="similar to sequence:INSDC:AE009432" FT /protein_id="CAK11782.1" FT /translation="MRVSILNRGANAVAALAALSNSQAMIEFDLSGRILTANENFCRAL FT GYELREIVGKHHSMFVEPAYASSAEYKAFWTKLAAGKFDQQQYKRLGKGGREVWIEASY FT NPVFRRGKPVKVIKIATDITAQKLKSAEDSGKIDALSRAQAIIEFTPAGEILTANDNFL FT STLGYSLAEIQGKHHSMFCEADYSRSEAYKEFWRRLASGQLVADEFMRVGKGGRKVYIQ FT ASYNPIFDLNGKVFKVVKFATDVTARVENVEQLARCLTNLADGDLSQMIQKPFIPSLER FT LRADFNSASEKLKGAMATVAENAKAISAGSNEIRTAADDLAKRTEQQAASVEETAAALE FT EITTTVKDSSRRAEEAGQLVGRARNHAEHSGQVVRDAIGAMDQIENSSREISNIIGVID FT EIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKSLITASGSHV FT ANGVALVTNAGSALQEIASQVHEINTNVTAIVEAAREQSTALGGISQSINTVDQGTQQN FT AAMVEEQTAASHGLAREAAALFELLEQFRFNDAPRSRSSFAQADRHPAAPTALKVVRNS FT PLASIQRGSASVALKSDWEEF" FT sig_peptide 69629..69700 FT /gene="mcpA" FT /locus_tag="pRL120068" FT /note="Signal peptide predicted for pRL120068 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.971) with cleavage FT site probability 0.787 between residues 24 and 25" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 69881..70006 FT /note="Pfam match to entry PF00785.11 PAC, score FT 44.1,E-value 4.1e-10" FT /inference="protein motif:Pfam:PF00785.11" FT misc_feature 70244..70372 FT /note="Pfam match to entry PF00785.11 PAC, score FT 28.9,E-value 1.5e-05" FT /inference="protein motif:Pfam:PF00785.11" FT misc_feature 70604..71272 FT /note="Pfam match to entry PF00015.9 MCPsignal, score FT 298.2, E-value 1.3e-86" FT /inference="protein motif:Pfam:PF00015.9" FT CDS complement(71462..72265) FT /transl_table=11 FT /locus_tag="pRL120069" FT /product="putative 3-hydroxybutyryl-CoA dehydratase" FT /note="similarity:fasta; SWALL:CRT_CLOAB (SWALL:P52046); FT Clostridium acetobutylicum; 3-hydroxybutyryl-coa FT dehydratase; crT; length 261 aa; id=40.62; ungapped FT id=41.6; E()=1.4e-29; 256 aa overlap; query 3-257 aa; FT subject 4-254 aa" FT /note="similarity:fasta; SWALL:Q983W9 (EMBL:AP003013); FT Rhizobium loti; crotonase; 3-hydroxbutyryl-coa dehydratase; FT length 291 aa; id=80.75; ungapped id=80.75; E()=3.9e-78; FT 265 aa overlap; query 1-265 aa; subject 1-265 aa" FT /db_xref="GOA:Q1M534" FT /db_xref="InterPro:IPR001753" FT /db_xref="UniProtKB/TrEMBL:Q1M534" FT /inference="similar to sequence:UniProtKB:P52046" FT /inference="similar to sequence:INSDC:AP003013" FT /protein_id="CAK11783.1" FT /translation="MADTVLIDSRDGIATLTLNRPEKLNALNYALIDRFLAILDAIETD FT SSIRAIILTGAGERAFSAGGDIYEFSESVAQGADVAMRDFVARGQRLTARLEAFRKPVI FT AAVNGLAFGGGCEITEAVPLAIASECALFAKPEINLAMPPTFGGTQRLPRLAGRKRALE FT LLLTGDAFSPQRALELGLVNQVVPHDALMPAAHDLARRIRRHSPLAAASILTAVTRGIN FT QSIAEGLLIEGEQFARMAPTADLREGLDGWIERRKPNYPGSWSLD" FT misc_feature complement(71705..72226) FT /note="Pfam match to entry PF00378.8 ECH, score FT 188.8,E-value 1.1e-53" FT /inference="protein motif:Pfam:PF00378.8" FT CDS 72354..72944 FT /transl_table=11 FT /locus_tag="pRL120070" FT /product="putative TetR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q6N1R6 (EMBL:BX572607); FT Rhodopseudomonas palustris; transcriptional regulator,tetr FT family; length 226 aa; id=74.33; ungapped id=74.73; FT E()=1.7e-54; 187 aa overlap; query 4-190 aa; subject 13-198 FT aa" FT /db_xref="GOA:Q1M533" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q1M533" FT /inference="similar to sequence:INSDC:BX572607" FT /protein_id="CAK11784.1" FT /translation="MISPAIPTRQRIISAAAKLFYNEGIRSVSVDAVAEEAGVTKRTLY FT YHFASKDDLIGAYLEARDQPNLALFKRWYAETTGEPADKVQGIFRNLARAARHPKWKGC FT GFLRTSAELVNMPGHPAMKVGIEHKKRVEAWLRVRFEAAGIKAEAPQLARQIVLLLDGS FT FAVVLLHRDPTYMEAAGEAAGSLIRAATANANA" FT misc_feature 72387..72527 FT /note="Pfam match to entry PF00440.8 TetR_N, score FT 72.7,E-value 9.6e-19" FT /inference="protein motif:Pfam:PF00440.8" FT misc_feature 72435..72500 FT /note="Predicted helix-turn-helix motif with score FT 1631.000, SD 4.74 at aa 28-49, sequence FT VSVDAVAEEAGVTKRTLYYHFA" FT CDS 73201..74040 FT /transl_table=11 FT /locus_tag="pRL120071" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q926H3 (EMBL:AL591985); FT Rhizobium meliloti; putative amino acid uptake ABC FT transporter periplasmic solute-binding protein; length 280 FT aa; id=87.45; ungapped id=88.08; E()=2.5e-93; 279 aa FT overlap; query 3-279 aa; subject 2-280 aa" FT /db_xref="GOA:Q1M532" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q1M532" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11785.1" FT /translation="MTISFRTGVMSLAVAALLSTPALAEGSKLDEVLARGHLVLGTGST FT NAPWHFKSADDKLQGFDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQ FT FMTVTGERAQQVAFTIPYYREGVGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAM FT VHAALPEATVDQYDSVDLIYQALESGRADAVATDQSSLAWYMTQNPGRYKDAGYGWNPQ FT TYACAVKRGDQDWLNFVNTALHEAMTGVEFDFYAKSFKTWFGKDLAPPQIGFPVEFK" FT sig_peptide 73201..73272 FT /locus_tag="pRL120071" FT /note="Signal peptide predicted for pRL120071 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 1.000 between residues 24 and 25" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 73312..73995 FT /note="Pfam match to entry PF00497.8 SBP_bac_3, score FT 173.2, E-value 5.5e-49" FT /inference="protein motif:Pfam:PF00497.8" FT CDS 74131..74820 FT /transl_table=11 FT /locus_tag="pRL120072" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q92VI8 (EMBL:AL591985); FT Rhizobium meliloti; putative amino acid uptake ABC FT transporter permease protein; length 228 aa; id=72.88; FT ungapped id=72.88; E()=4.5e-56; 225 aa overlap; query 5-229 FT aa; subject 4-228 aa" FT /db_xref="GOA:Q1M531" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1M531" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11786.1" FT /translation="MLWSERAARMGYTLNFAAVWRNFDFLLSGLALSLGLAVISILIGA FT AIGLVVAFALTSKNRFAVVPARIYVTVIRNLPILVLVLFVFFALPQMGLRLDKIKSFVL FT VLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSST FT IISLFKDTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAAVMRFVE FT RRLALPR" FT sig_peptide 74158..74292 FT /locus_tag="pRL120072" FT /note="Signal peptide predicted for pRL120072 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.903) with cleavage FT site probability 0.492 between residues 45 and 46" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 74206..74811 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 55.8, E-value 1.2e-13" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature order(74218..74286,74329..74397,74431..74499,74725..74793) FT /locus_tag="pRL120072" FT /note="4 probable transmembrane helices predicted at aa FT 21-43, 58-80, 92-114 and 190-212" FT /inference="protein motif:TMHMM:2.0" FT CDS 74826..75485 FT /transl_table=11 FT /locus_tag="pRL120073" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q92VI7 (EMBL:AL591985); FT Rhizobium meliloti; putative amino acid uptake ABC FT transporter permease protein; length 219 aa; id=76.71; FT ungapped id=76.71; E()=1.6e-61; 219 aa overlap; query 1-219 FT aa; subject 1-219 aa" FT /db_xref="GOA:Q1M530" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1M530" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11787.1" FT /translation="MSHTFLEQLWIARYVIMNGIGVTVSISLLAILAGSILGVFVGLAL FT VYGGVVLRLAVRAYTDIIRGTPVLVLVLASYYVSAAVGLDLGPFSAGVLALAIFCSSHV FT GEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTL FT LSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIINYGIEHFGKYVERKTALPS" FT misc_feature order(74850..74918,74931..74990,75009..75077,75384..75437) FT /locus_tag="pRL120073" FT /note="4 probable transmembrane helices predicted at aa FT 9-31, 36-55, 62-84 and 187-204" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 74871..75476 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 81.5, E-value 2.1e-21" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 75498..76268 FT /transl_table=11 FT /locus_tag="pRL120074" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q92VI6 (EMBL:AL591985); FT Rhizobium meliloti; putative amino acid uptake ABC FT transporter ATP-binding protein; length 255 aa; id=80.55; FT ungapped id=80.55; E()=2.8e-73; 252 aa overlap; query 5-256 FT aa; subject 4-255 aa" FT /db_xref="GOA:Q1M529" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M529" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11788.1" FT /translation="MAKTILDIQGLRKTYGIHEVLKGVDCAVEEGEVISIIGSSGSGKT FT TLLRCINMLEEFQGGTISLDGEEIGYRAEGATRRRKSEKEIARQRALTGMAFQQFNLFP FT HMSAAENVMLGLVKVKKMAKPDARVIAEKWLDRVGLSARMNHYPGQLSGGQQQRVAIAR FT AIAMSPRLMLFDEVTSALDPELVGEVLQVIKGLAADGMTMLLVTHEMRFAYDVSSRVIF FT MNQGVICEEGDPKEMFVHPKTERLAEFLKTSSFN" FT misc_feature 75588..76175 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 209.9, E-value 4.9e-60" FT /inference="protein motif:Pfam:PF00005.11" FT CDS 76413..76667 FT /transl_table=11 FT /gene="stbC" FT /locus_tag="pRL120075" FT /product="putative plasmid stability protein StbC" FT /note="similarity:fasta; SWALL:STBC_PSESM (SWALL:Q52561); FT Pseudomonas syringae; plasmid stability protein StbC; stbC; FT length 97 aa; id=50; ungapped id=50.61; E()=5.8e-11; 82 aa FT overlap; query 4-84 aa; subject 16-97 aa" FT /note="similarity:fasta; SWALL:Q9PD14 (EMBL:AE003987); FT Xylella fastidiosa; plasmid stabilization protein; length FT 86 aa; id=55.95; ungapped id=55.95; E()=8.1e-15; 84 aa FT overlap; query 1-84 aa; subject 3-86 aa" FT /db_xref="UniProtKB/TrEMBL:Q1M528" FT /inference="similar to sequence:UniProtKB:Q52561" FT /inference="similar to sequence:INSDC:AE003987" FT /protein_id="CAK11789.1" FT /translation="MPAVTIRNLSEATHRALKVRAAHHGRSAEAEMREILEAAVRPETR FT LRLGSALAERSRRLGLTNEDFAVLDQARDTLPAKPMSFE" FT CDS 76664..77089 FT /transl_table=11 FT /gene="stbB" FT /locus_tag="pRL120076" FT /product="putative plasmid stability protein StbB" FT /note="similarity:fasta; SWALL:STBB_PSESM (SWALL:Q52562); FT Pseudomonas syringae; plasmid stability protein StbB; stbB; FT length 139 aa; id=51.79; ungapped id=52.17; E()=6.7e-24; FT 139 aa overlap; query 1-138 aa; subject 1-139 aa" FT /note="similarity:fasta; SWALL:Q9PD15 (EMBL:AE003987); FT Xylella fastidiosa; plasmid stabilization protein; length FT 142 aa; id=66.9; ungapped id=66.9; E()=1.6e-35; 139 aa FT overlap; query 1-139 aa; subject 1-139 aa" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:Q1M527" FT /inference="similar to sequence:UniProtKB:Q52562" FT /inference="similar to sequence:INSDC:AE003987" FT /protein_id="CAK11790.1" FT /translation="MIILDTNVVSEAMKPTPDEAVKFWLDEQAAETLFLSSVTIAELMF FT GIGALPAGKRRERLSDALDGLMELFESRILAFDITAARHYADLAVKARAAGRGFPTPDG FT YIAAIAASKGFAVATRDTSAFNAAGVKVINPWAASTA" FT misc_feature 76667..77068 FT /note="Pfam match to entry PF01850.8 PIN, score FT 94.9,E-value 2e-25" FT /inference="protein motif:Pfam:PF01850.8" FT CDS 77283..78044 FT /transl_table=11 FT /locus_tag="pRL120077" FT /product="putative GntR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q7CZD5 (EMBL:AE008065); FT Agrobacterium tumefaciens; agr_c_2564p; length 236 aa; FT id=76.41; ungapped id=76.41; E()=1.1e-64; 229 aa overlap; FT query 1-229 aa; subject 1-229 aa" FT /db_xref="GOA:Q1M526" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M526" FT /inference="similar to sequence:INSDC:AE008065" FT /protein_id="CAK11791.1" FT /translation="MQDSHTSESTQKTIEETIVSGILSAKIRPGTRLSENQLATLFGVS FT RTRVREAMMRLETRGIVHVSPRRGWFVVEPSAEEAIAVYEARRVIEAGLLRSMRVLTDE FT GGKALDVHLNEEKTAMAAGDRQRLTYLMGDFHIRIAELSGNAIIVDILRDLTARTILIS FT MLYQSEFHAAQSHDGHCRIFEAMQAGDFARAAELSIEHLDEVEMGLDLTTRPDPLSELR FT SSLSLPPKAVPSVSQLSDPKNHNFKGAIKTC" FT misc_feature 77310..77498 FT /note="Pfam match to entry PF00392.9 GntR, score FT 76.8,E-value 5.8e-20" FT /inference="protein motif:Pfam:PF00392.9" FT CDS 78038..78823 FT /transl_table=11 FT /locus_tag="pRL120078" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q8UFK9 (EMBL:AE009100); FT Agrobacterium tumefaciens; ABC transporter, substrate FT binding protein; length 261 aa; id=81.6; ungapped id=81.6; FT E()=2.1e-77; 261 aa overlap; query 1-261 aa; subject 1-261 FT aa" FT /db_xref="GOA:Q1M525" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q1M525" FT /inference="similar to sequence:INSDC:AE009100" FT /protein_id="CAK11792.1" FT /translation="MLTRRVFFAIATLAATFGFGSASYADALADITARGTLRVAVPQDF FT PPFGSVGTDMAPMGYDIDVANLIAEKLGVKTELVPVTSANRVPYLQTNKVDLVISSLGK FT NAEREKVIDFTTAYAPFFNGVFAPADVSIAKVEDLAGKSIGVTRGAVEDLELTKIAPAD FT ATIKRYEDNNGTISAFLSGQVDTIATGNVVAAAILSKNPPKRPEMKFLIKNSPCYIGLN FT KEQTALLEKVNGIIAAAKTDGALNAISQKWLGADLPSDL" FT sig_peptide 78038..78112 FT /locus_tag="pRL120078" FT /note="Signal peptide predicted for pRL120078 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.933 between residues 25 and 26" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 78146..78802 FT /note="Pfam match to entry PF00497.8 SBP_bac_3, score FT 181.0, E-value 2.5e-51" FT /inference="protein motif:Pfam:PF00497.8" FT CDS 78901..79572 FT /transl_table=11 FT /locus_tag="pRL120079" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q7CZD3 (EMBL:AE008065); FT Agrobacterium tumefaciens; agr_c_2567p; length 223 aa; FT id=89.23; ungapped id=89.23; E()=1.3e-78; 223 aa overlap; FT query 1-223 aa; subject 1-223 aa" FT /db_xref="GOA:Q1M524" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1M524" FT /inference="similar to sequence:INSDC:AE008065" FT /protein_id="CAK11793.1" FT /translation="MSYHFEFGWLLEYYPEIIKGILITLELIAIGGVLGISLGIFCAWV FT RALGPAWLKPVVATYVELIRNTPFLIQLFFIFFGLPSLGFKLSELTAANLAMVVNLGAY FT SCEIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSS FT VVSQIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVLAILLRQLLAVVGGFIFPRRAA FT R" FT misc_feature 78949..79554 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 69.4, E-value 9.3e-18" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature order(78958..79026,79087..79155,79483..79551) FT /locus_tag="pRL120079" FT /note="3 probable transmembrane helices predicted at aa FT 20-42, 63-85 and 195-217" FT /inference="protein motif:TMHMM:2.0" FT CDS 79569..80228 FT /transl_table=11 FT /locus_tag="pRL120080" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q7CZD2 (EMBL:AE008065); FT Agrobacterium tumefaciens; agr_c_2569p; length 219 aa; FT id=86.75; ungapped id=86.75; E()=2e-74; 219 aa overlap; FT query 1-219 aa; subject 1-219 aa" FT /note="This CDS overlaps 20 nt at the C-terminus with FT pRL120081" FT /db_xref="GOA:Q1M523" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1M523" FT /inference="similar to sequence:INSDC:AE008065" FT /protein_id="CAK11794.1" FT /translation="MIEFTLWDILRNLLLATRWTILLSLVSFIGGGVVGLGLLFLRISK FT RKAFRTVAKYYIELFQGTPLLMQLFIAFFGLGLFGIDVPAWLAAGFALILWSAAFLAEI FT WRGCVEAVVKGQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSI FT IGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH" FT misc_feature 79605..80210 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 55.5, E-value 1.4e-13" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature order(79626..79694,79731..79799,79815..79883,79992..80060, FT 80103..80171) FT /locus_tag="pRL120080" FT /note="5 probable transmembrane helices predicted at aa FT 20-42, 55-77, 83-105, 142-164 and 179-201" FT /inference="protein motif:TMHMM:2.0" FT CDS 80206..80931 FT /transl_table=11 FT /locus_tag="pRL120081" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q8UFK6 (EMBL:AE009100); FT Agrobacterium tumefaciens; ABC transporter, nucleotide FT binding/ATPase protein; length 244 aa; id=89.58; ungapped FT id=89.58; E()=3.2e-73; 240 aa overlap; query 1-240 aa; FT subject 1-240 aa" FT /note="This CDS overlaps 20 nt at the N-terminus with FT pRL120080" FT /db_xref="GOA:Q1M522" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M522" FT /inference="similar to sequence:INSDC:AE009100" FT /protein_id="CAK11795.1" FT /translation="MSLIEITEVRKSFGTTEVLKGINLDVEAGEVIAIIGKSGSGKSTL FT LRCINGLETITDGSISVAGAQLLDDEVHLKALRLKVGMIFQQFNLFPHLTVGGNVMLSQ FT TVVKKTPKAEAEATARKMLERVGLGHRFDAYPDELSGGQQQRVAIARALAMQPTALLCD FT EITSALDPELVAEVLAVVRELAAEGMTLLMVTHEMKFARDVCNRVIFMHQGRVHEAGPP FT EEVFAKPQTAELKQFLGVN" FT misc_feature 80290..80847 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 240.7, E-value 2.6e-69" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(80979..81350) FT /transl_table=11 FT /locus_tag="pRL120082" FT /product="putative plasmid stabilization element" FT /note="similarity:fasta; SWALL:Q79EC5 (EMBL:L05507); FT Plasmid RK2; plasmid stabilization element; parE; length FT 103 aa; id=28.57; ungapped id=31.25; E()=0.12; 105 aa FT overlap; query 6-110 aa; subject 5-100 aa" FT /note="similarity:fasta; SWALL:Q9PBV3 (EMBL:AE004021); FT Xylella fastidiosa; plasmid stabilization protein; length FT 102 aa; id=28.7; ungapped id=33.33; E()=0.017; 108 aa FT overlap; query 6-110 aa; subject 5-100 aa" FT /db_xref="InterPro:IPR007712" FT /db_xref="UniProtKB/TrEMBL:Q1M521" FT /inference="similar to sequence:INSDC:L05507" FT /inference="similar to sequence:INSDC:AE004021" FT /protein_id="CAK11796.1" FT /translation="MAPRVLILPTALDNYRLAVRETARKWSTEQAKAYSRLLRAGFEGI FT PEAYARVRIKKDERVGNSLFRLYKIEHHYAVYIVVDDSTFVIAAVLHERMDIPAQLRTI FT ERLTDREYAALMGHPRPKS" FT misc_feature complement(81060..81341) FT /note="Pfam match to entry PF05016.3 Plasmid_stabil, score FT 41.4, E-value 2.7e-09" FT /inference="protein motif:Pfam:PF05016.3" FT CDS complement(81350..81607) FT /transl_table=11 FT /locus_tag="pRL120083" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q7NNQ4 (EMBL:AP006569); FT Gloeobacter violaceus; gsr0356 protein; length 86 aa; FT id=36; ungapped id=42.18; E()=0.11; 75 aa overlap; query FT 4-77 aa; subject 3-67 aa" FT /db_xref="UniProtKB/TrEMBL:Q1M520" FT /inference="similar to sequence:INSDC:AP006569" FT /protein_id="CAK11797.1" FT /translation="MTSSLHVSLPDEMRAFVDMRANGKSQYTTPSEYVRALIREDMARE FT EDRRFAIRSLLRAEEEFRRGEMLPLSALDAIDAELDEELR" FT CDS complement(81718..82224) FT /transl_table=11 FT /locus_tag="pRL120084" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q92TU3 (EMBL:AL591985); FT Rhizobium meliloti; hypothetical protein smb20695; length FT 168 aa; id=87.95; ungapped id=87.95; E()=1.4e-59; 166 aa FT overlap; query 1-166 aa; subject 1-166 aa" FT /db_xref="InterPro:IPR014914" FT /db_xref="UniProtKB/TrEMBL:Q1M519" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11798.1" FT /translation="MTLLPIALGGTELVAWRLDQAVHAPTWDSGEGAYRVGGRWNSKGV FT RAVYCSLDPATAILEVAVHKGFRALDTVTHRMTAAVIADAGDIHVVDPGNVPNPNWLRP FT GIPSAGQQAFGDDLLRQHRFVAIPSAVSRHSWNLIFLAGGATGAYALKFQEAFALDTRL FT HPPTS" FT CDS complement(82221..82709) FT /transl_table=11 FT /locus_tag="pRL120085" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q92TU2 (EMBL:AL591985); FT Rhizobium meliloti; hypothetical protein smb20696; length FT 161 aa; id=86.42; ungapped id=86.95; E()=2e-52; 162 aa FT overlap; query 1-162 aa; subject 1-161 aa" FT /db_xref="InterPro:IPR011979" FT /db_xref="UniProtKB/TrEMBL:Q1M518" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11799.1" FT /translation="MAVAAKVPSLAAAGGGELQKIEALLGGSRILSRSLTNALDAHELL FT LHGLPASALDHLVGTLVVLGKNESLEKAVGMSLRTWQRRKDTPSKPLNQEQSGRAWKFA FT EILAKATDIFGSQAEAEQWLERPAVGLEQRRPIDLLGTPAGVELVEDHLDRLEYGVYA" FT CDS complement(82983..83717) FT /transl_table=11 FT /locus_tag="pRL120086" FT /product="putative pspA family transcriptional FT regulator-associated protein" FT /note="similarity:fasta; SWALL:Q6LLF4 (EMBL:CR378675); FT Photobacterium profundum; hypothetical protein YjfJ; yjfJ; FT length 228 aa; id=41.15; ungapped id=41.33; E()=1.2e-22; FT 226 aa overlap; query 1-225 aa; subject 1-226 aa" FT /db_xref="InterPro:IPR007157" FT /db_xref="UniProtKB/TrEMBL:Q1M517" FT /inference="similar to sequence:INSDC:CR378675" FT /protein_id="CAK11800.1" FT /translation="MSTWGKIFTAIRGGINEVAEAAADSQSMRVLDQEIRDAEQSLRGA FT RSDLAGIMASNKSVMRRLEENRAKETKDTDSARAAISAGRTDLAQGLAQRIAGTRAEVQ FT RDQEELDRLLPRQQQMLRTIQETEARIAQMKREVENVKANESLLRAQSAIAHSQSGINT FT RLGSAVESLERIKKRQEITAGRIEAGAELAALENGSDLDRQLREAGIGSSSHSADDILA FT QLMAPKHSVEPILLPAPTSQKD" FT misc_feature complement(83028..83714) FT /note="Pfam match to entry PF04012.2 PspA_IM30, score FT 129.4, E-value 8.2e-36" FT /inference="protein motif:Pfam:PF04012.2" FT CDS complement(83714..84199) FT /transl_table=11 FT /locus_tag="pRL120087" FT /product="conserved hypothetical protein" FT /note="Similar to Pseudomonas syringae hypothetical protein FT SWALL:Q87YK8 (EMBL:AE016869) (217 aa)" FT /note="similarity:fasta; SWALL:Q87YK8 (EMBL:AE016869); FT Pseudomonas syringae; hypothetical protein; length 217 aa; FT id=38.09; ungapped id=40.58; E()=4e-11; 147 aa overlap; FT query 14-153 aa; subject 69-213 aa" FT /db_xref="InterPro:IPR019231" FT /db_xref="UniProtKB/TrEMBL:Q1M516" FT /inference="similar to sequence:INSDC:AE016869" FT /protein_id="CAK11801.1" FT /translation="MQTDYPNILTFQPMEDFLETWNLTTLTRLFAADPDALGDVDVAVP FT EQGDVICVTLKEKGDLDVFVAVSGERDILVSAVLVPCKDVPNREAFERMVLKTHKFVPL FT SSFGITTIDGEEWYELFGSLSARSPAETVVEEVAILAANAVDAAHMIEEWKSGEIAA" FT CDS 84264..85319 FT /transl_table=11 FT /locus_tag="pRL120088" FT /product="putative transmembrane cation transporter" FT /note="similarity:fasta; SWALL:MTHK_METTH (SWALL:O27564); FT Methanobacterium thermoautotrophicum; calcium-gated FT potassium channel; mthK; length 336 aa; id=25.25; ungapped FT id=27.57; E()=4.2e-06; 297 aa overlap; query 23-314 aa; FT subject 24-300 aa" FT /note="similarity:fasta; SWALL:Q8P6X8 (EMBL:AE012396); FT Xanthomonas campestris; potassium channel related protein; FT length 360 aa; id=37.1; ungapped id=37.42; E()=1.4e-37; 345 FT aa overlap; query 1-344 aa; subject 1-343 aa" FT /db_xref="GOA:Q1M515" FT /db_xref="InterPro:IPR013099" FT /db_xref="UniProtKB/TrEMBL:Q1M515" FT /inference="similar to sequence:UniProtKB:O27564" FT /inference="similar to sequence:INSDC:AE012396" FT /protein_id="CAK11802.1" FT /translation="MPFIASLLRRVYLSLSELAWSALFVILVIHLVASYLLFLLAGEGD FT LVGNPVDFLYYYMVTATTVGYGDLSPKSGPGRLIAVLFVLPGGIAIFTAVLGKLLTTIG FT TIWRNRMRGLGDYSERAGHIIVLGWQEGQTYQTLRLLHAERQANEPMSVLVAKDLPENP FT ASNYADYIRTERLGDADALVRAGVAKARAIIARGANDDETLAAVLIAEDHAPNAHIVAY FT FADDRTAQMVKQRRPRVEAVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVP FT PLQTPLLYGDVFLSLKRQHNVTLVGMLSQGVTDLNCGDEAPLRGGETLYYISGMRLDPA FT AIAWARMGDVS" FT misc_feature order(84321..84389,84495..84563) FT /locus_tag="pRL120088" FT /note="2 probable transmembrane helices predicted at aa FT 20-42 and 78-100" FT /inference="protein motif:TMHMM:2.0" FT CDS 85316..85972 FT /transl_table=11 FT /locus_tag="pRL120089" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q87YL2 (EMBL:AE016869); FT Pseudomonas syringae; hypothetical protein; length 218 aa; FT id=31.41; ungapped id=34.97; E()=4.4e-11; 226 aa overlap; FT query 2-215 aa; subject 1-215 aa" FT /db_xref="InterPro:IPR019621" FT /db_xref="UniProtKB/TrEMBL:Q1M514" FT /inference="similar to sequence:INSDC:AE016869" FT /protein_id="CAK11803.1" FT /translation="MIGWFGRDKNERPLPKEHGPLSAAIGGALEIDFLSLEADALAGQP FT AMPLPRSGPFIIAAYGEVSLDAATVLSRYYDEDHRMIQVMSTSGQPGDVDDISFYQPWD FT SVVPAGQGEWNRWTGPDGLIGQPSYDADGILYSRFWGEGPERTPLAEFVEKVDDGEAQR FT SIHQTCMLYYRPLGSTREMLLINVERDLDLGQSQAGSSVEFLIGYGLAPADVRRV" FT CDS 86007..86408 FT /transl_table=11 FT /locus_tag="pRL120090" FT /product="putative transmembrane protein" FT /note="similarity:fasta; SWALL:Q8UDM0 (EMBL:AE009161); FT Agrobacterium tumefaciens; hypothetical protein atu2104; FT length 133 aa; id=68.42; ungapped id=68.42; E()=3.1e-33; FT 133 aa overlap; query 1-133 aa; subject 1-133 aa" FT /db_xref="GOA:Q1M513" FT /db_xref="InterPro:IPR007140" FT /db_xref="UniProtKB/TrEMBL:Q1M513" FT /inference="similar to sequence:INSDC:AE009161" FT /protein_id="CAK11804.1" FT /translation="MLDYVAGLPAFLGYFAVGLAAYGVFAVIYTFLTPQKEVQLIRAGN FT LAAVTAFLGALVGFSLPLASAAANSVSIVDYIIWAVVGILAQILAYYIANFTMTDLHEK FT ITAGDIAAGLWGGGIALVIGILNAACMTY" FT misc_feature 86022..86210 FT /note="Pfam match to entry PF03994.2 DUF350, score FT 52.5,E-value 1.2e-12" FT /inference="protein motif:Pfam:PF03994.2" FT misc_feature order(86034..86102,86136..86204,86232..86300,86334..86402) FT /locus_tag="pRL120090" FT /note="4 probable transmembrane helices predicted at aa FT 10-32, 44-66, 76-98 and 110-132" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 86217..86402 FT /note="Pfam match to entry PF03994.2 DUF350, score FT 34.5,E-value 3.2e-07" FT /inference="protein motif:Pfam:PF03994.2" FT CDS 86421..87014 FT /transl_table=11 FT /locus_tag="pRL120091" FT /product="putative transmembrane protein" FT /note="similarity:fasta; SWALL:Q7CXV9 (EMBL:AE008127); FT Agrobacterium tumefaciens; agr_c_3818p; length 198 aa; FT id=43.07; ungapped id=46.4; E()=3.1e-21; 195 aa overlap; FT query 9-194 aa; subject 7-196 aa" FT /db_xref="GOA:Q1M512" FT /db_xref="InterPro:IPR009576" FT /db_xref="UniProtKB/TrEMBL:Q1M512" FT /inference="similar to sequence:INSDC:AE008127" FT /protein_id="CAK11805.1" FT /translation="MRRRKSGHKRPFLALGTIAASTLALSGCGDQTPSEAMFTSVDQCV FT TSGMDRQVCQAGYQDAMRAHLAAAPRFNGMAACEAEYGSGQCAEQPASAVPNNTGGGGS FT FFVPFLTGYVLSSALNNIGDYYNYRRRQEESGSYGSTPIYRNRSGQTVTTTVRSGGNDT FT AIAPSRQTVKPVNVNTRTVARQGFGGRSSFSFGG" FT misc_feature order(86454..86507,86721..86789) FT /locus_tag="pRL120091" FT /note="2 probable transmembrane helices predicted at aa FT 12-29 and 101-123" FT /inference="protein motif:TMHMM:2.0" FT CDS 87016..88173 FT /transl_table=11 FT /locus_tag="pRL120092" FT /product="putative glutathionylspermidine synthetase" FT /note="codons 40 to the C-terminus are similar to codons FT 270 to 630 of Crithidia fasciculata trypanothione FT synthetase SWALL:TRYS_CRIFA (SWALL:O60993) (652 aa), and FT entire protein is similar to Erwinia carotovora subsp. FT atroseptica SCRI1043 putative glutathionylspermidine FT synthase SWALL:Q6DAC7 (EMBL:BX950851) (386 aa)" FT /note="similarity:fasta; SWALL:TRYS_CRIFA (SWALL:O60993); FT Crithidia fasciculata; trypanothione synthetase; trS; FT length 652 aa; id=28.72; ungapped id=31.61; E()=5.3e-12; FT 362 aa overlap; query 44-378 aa; subject 271-626 aa" FT /note="similarity:fasta; SWALL:Q6DAC7 (EMBL:BX950851); FT Erwinia carotovora subsp. atroseptica SCRI1043; putative FT glutathionylspermidine synthase; length 386 aa; id=52.71; FT ungapped id=53.4; E()=3.3e-81; 387 aa overlap; query 1-384 FT aa; subject 1-385 aa" FT /db_xref="InterPro:IPR005494" FT /db_xref="UniProtKB/TrEMBL:Q1M511" FT /inference="similar to sequence:UniProtKB:O60993" FT /inference="similar to sequence:INSDC:BX950851" FT /protein_id="CAK11806.1" FT /translation="MKRITLPARPDWRDKARAVGFGFHVMYGEPYWLDDAAYTFTLDEI FT ETRIEEPSQELHDMCMDMVGDIVRSEESLDRLAIPEDLRDVVQRSWQRRDRHLYGRFDL FT AYDGTGPAKLLEYNADTPTSVFETAYFQFNWLTDQVALGILPKDADQYNSLQESLVEAF FT EQFSKEPIFHFAAMTDNEEDRGTTVYLMDCAVQAGHRVELLDIREIGIDAQGRYTDLKD FT RVIDRCFKLYPWEFMLREPFARDLVRSGDVFVEPAWKAVLSNKGLLPLLWQRHPNHPNL FT LASYFADDPAASTLSDYVRKPLLSREGENVTIFRDGRELISAPGDYGDEGFIVQAYAPL FT FESDGGFAVLGSWIVGDRACGLAVREDRSRITANLSRFVPHVIVG" FT misc_feature 87022..88167 FT /note="Pfam match to entry PF03738.3 GSP_synth, score FT 623.1, E-value 2e-184" FT /inference="protein motif:Pfam:PF03738.3" FT CDS complement(88560..89444) FT /transl_table=11 FT /locus_tag="pRL120093" FT /product="putative dioxygenase" FT /note="similarity:fasta; SWALL:CATA_ACIAD (SWALL:P07773); FT Acinetobacter sp.; catechol 1,2-dioxygenase; catA; length FT 311 aa; id=31.54; ungapped id=33.69; E()=5.4e-25; 298 aa FT overlap; query 6-291 aa; subject 4-294 aa" FT /note="similarity:fasta; SWALL:Q8UCG0 (EMBL:AE009199); FT Agrobacterium tumefaciens; dioxygenase; length 295 aa; FT id=75.69; ungapped id=75.95; E()=2.8e-88; 288 aa overlap; FT query 5-291 aa; subject 8-295 aa" FT /note="similarity:fasta; SWALL:Q9ZAM3 (EMBL:X72850); FT Sphingomonas sp; hydroxyquinol 1,2-dioxygenase; dxnF; FT length 299 aa; id=47.91; ungapped id=48.08; E()=1.3e-49; FT 288 aa overlap; query 3-290 aa; subject 10-296 aa" FT /db_xref="GOA:Q1M510" FT /db_xref="InterPro:IPR007535" FT /db_xref="UniProtKB/TrEMBL:Q1M510" FT /inference="similar to sequence:UniProtKB:P07773" FT /inference="similar to sequence:INSDC:AE009199" FT /inference="similar to sequence:INSDC:X72850" FT /protein_id="CAK11807.1" FT /translation="MDAHEKGFFTEEISVEVVTGRNKNAKDERLKQIMEVITRKLHEAV FT KEIEPTQDEWMQAILFLTRTGQMCNEWRQEFILLSDVLGVSMLVDAINNRKPSGASEST FT VLGPFHVEGAPELAMGANICLDAKGEDMVIGGRILDTAGQPIKDAVIDVWQANDEGFYD FT VQQQGIQPDFNLRGVFRTGADGRYWFRAVKPKYYPIPDDGPVGKLLGALGRHPYRPAHL FT HYIIKAHGFETLTTHIFDPDDPYIQSDAVFGVKESLLAKFQHVEDSVRANELSFSGKFW FT QIEHDFVLARPEE" FT misc_feature complement(88569..89132) FT /note="Pfam match to entry PF00775.10 Dioxygenase_C, score FT 252.0, E-value 1e-72" FT /inference="protein motif:Pfam:PF00775.10" FT misc_feature complement(89133..89366) FT /note="Pfam match to entry PF04444.3 Dioxygenase_N, score FT 101.7, E-value 1.8e-27" FT /inference="protein motif:Pfam:PF04444.3" FT CDS complement(89452..91206) FT /transl_table=11 FT /gene="tfdB" FT /locus_tag="pRL120094" FT /product="putative dichlorophenol FT monooxygenase/hydroxylase" FT /EC_number="1.14.13.20" FT /note="similarity:fasta; SWALL:TFDB_COMAC (SWALL:Q8KN28); FT Comamonas acidovorans; 2,4-dichlorophenol 6-monooxygenase; FT tfdB; length 586 aa; id=54.23; ungapped id=54.51; FT E()=5.2e-130; 579 aa overlap; query 4-582 aa; subject 8-583 FT aa" FT /note="similarity:fasta; SWALL:Q700X1 (EMBL:AJ628861); FT Sphingobium herbicidovorans; dichlorophenol hydroxylase; FT tfdB; length 599 aa; id=56.08; ungapped id=56.77; FT E()=2.8e-132; 583 aa overlap; query 3-582 aa; subject 5-583 FT aa" FT /note="This CDS overlaps 7 nt at the N-terminus with FT pRL120095" FT /db_xref="GOA:Q1M509" FT /db_xref="InterPro:IPR003042" FT /db_xref="UniProtKB/TrEMBL:Q1M509" FT /inference="similar to sequence:UniProtKB:Q8KN28" FT /inference="similar to sequence:INSDC:AJ628861" FT /protein_id="CAK11808.1" FT /translation="MADITTDVLIIGTGPAGSATAALLSSYGVENLVINRYRWLASTPR FT AHITNQRTMEVLRDLGRDVEDEAYMFAAEQDLMGENVFCTSLTGEEIGRMKSWGKHPLS FT RAEHQLSSPTHMNDLPQTFMEPLLFKTACSRGSQSRMSTEYLSHAQDEDGVTTTCLDRL FT TGKEFTVRSKYLVGADGGNSKVAEHAGLTFEGKMGVAGSMNILFKADLSRLVAHRPSVL FT YWVLQPGADVGGIGMGLVRMVRPWNEWLIVWGYDINQPAPEVDEAHAKKVVRDLVGDPD FT LEMTIKSVSTWTVNNMYATSMSNGRVFCMGDATHRHPPSNGLGSNTSIQDAFNLAWKLA FT FVLKGAAGPKLLDSYQAERAPVAKQIVRRANKSIEEFGPIFKALGLLDSIDPVKMQQNM FT DARCNNTAAAEEQRAAIRKAIADKVYEFDCHGVEMNQRYHSSAAISDGQAEPAFTKDPE FT LHCQQTSWPGARLPHAWLFSATGEKVSTLDLTGHGKLTVLTGIGGQGWVEAARSLGNKF FT GIEIVAQVIGPRQPWQDFTGDWANIREIRDSGILLVRPDHHVAWRREAMVDDPTTELRR FT ALTAILGK" FT misc_feature complement(90094..90696) FT /note="Pfam match to entry PF01360.9 Monooxygenase, score FT 211.2, E-value 2e-60" FT /inference="protein motif:Pfam:PF01360.9" FT misc_feature complement(90784..91185) FT /note="Pfam match to entry PF01494.7 FAD_binding_3, score FT 128.8, E-value 1.2e-35" FT /inference="protein motif:Pfam:PF01494.7" FT CDS complement(91199..92284) FT /transl_table=11 FT /locus_tag="pRL120095" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q986V0 (EMBL:AP003011); FT Rhizobium loti; ABC transporter, permease protein; length FT 355 aa; id=37.42; ungapped id=39.38; E()=1.1e-22; 342 aa FT overlap; query 1-342 aa; subject 1-325 aa" FT /note="This CDS overlaps 7 nt at the C-terminus with FT pRL120094" FT /db_xref="GOA:Q1M508" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q1M508" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11809.1" FT /translation="MTMAIPSFTVETRTRASTLSAVAVVALLLLAFAAPFIVARGVIQD FT LFFILTMLVLAQNWNLLAGYAGLISVGQQVFVGFGAYTMFGCVILFGVDPVVAILIAGV FT FSVALAIPTAFFTFRLYGPYFAIGTWVVAEVVRLLLAQWKALGGGTGTSLPREATRDMM FT GVGAMRDLFGMKASEAGDALTYWLALILAVATIGFIYGLLRSKQGLGLAAVRDNEQAAR FT ALGVDARRMKTLVYLATAFMTGIAGALIYVQKARISPDAAFSVTDWTAYVIFIVVIGGI FT GTIEGPILGVIIFFLLQNLLADYGSWYLLMLGLLGIAIMLLAPRGLWGLFSERTGIQLF FT PVRRVLKGGPLNLTHRGGTHG" FT misc_feature complement(join(91316..91375,91394..91483,91526..91585, FT 91673..91741,91856..91924,91937..91996,92006..92059, FT 92078..92146,92156..92224)) FT /locus_tag="pRL120095" FT /note="9 probable transmembrane helices predicted at aa FT 21-43, 47-69, 76-93, 97-116,121-143, 182-204, 234-253, FT 268-297 and 304-323" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(91325..92176) FT /note="Pfam match to entry PF02653.5 BPD_transp_2, score FT 72.7, E-value 1e-18" FT /inference="protein motif:Pfam:PF02653.5" FT sig_peptide complement(92186..92284) FT /locus_tag="pRL120095" FT /note="Signal peptide predicted for pRL120095 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.968 between residues 33 and 34" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(92294..93157) FT /transl_table=11 FT /locus_tag="pRL120096" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q89GE1 (EMBL:AP005958); FT Bradyrhizobium japonicum; ABC transporter permease protein; FT length 288 aa; id=48.75; ungapped id=48.75; E()=1.1e-49; FT 281 aa overlap; query 5-285 aa; subject 6-286 aa" FT /db_xref="GOA:Q1M507" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q1M507" FT /inference="similar to sequence:INSDC:AP005958" FT /protein_id="CAK11810.1" FT /translation="MNWLDTILQGVLLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLA FT AFLILILVTTLGLDPFVAALIAMPLMFAIGWGLQYFLLNRTLGKDILPPLLVTFGLSIV FT IQNGLLEGFSADSRRVFAGSLESASVNLGPVTAGIMPLMTFFSAVAVIVCLNQLIYRTS FT VGRAFRATSDDPVTAGLMGIRPQRIFAMATGLAMVVVTIAALYLGTRANFDPTSGPARL FT IYAFEAVIIGGLGSLWGTLAGGIILGVAQTVGAAINPEWQILAGHLAFLAVLLFKPRGL FT FPRAVD" FT misc_feature complement(join(92312..92371,92408..92476,92534..92596, FT 92681..92749,92828..92887,92906..92974,92984..93037, FT 93074..93142)) FT /locus_tag="pRL120096" FT /note="8 probable transmembrane helices predicted at aa FT 6-28, 41-58, 62-84, 91-110,137-159, 188-208, 228-250 and FT 263-282" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(92336..93142) FT /note="Pfam match to entry PF02653.5 BPD_transp_2, score FT 64.2, E-value 3.5e-16" FT /inference="protein motif:Pfam:PF02653.5" FT CDS complement(93144..93863) FT /transl_table=11 FT /locus_tag="pRL120097" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q89GE0 (EMBL:AP005958); FT Bradyrhizobium japonicum; ABC transporter ATP-binding FT protein; length 235 aa; id=51.07; ungapped id=52.65; FT E()=4.8e-37; 233 aa overlap; query 3-232 aa; subject 6-234 FT aa" FT /db_xref="GOA:Q1M506" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M506" FT /inference="similar to sequence:INSDC:AP005958" FT /protein_id="CAK11811.1" FT /translation="MALLETRGLTASYGDFQALFGVDIMVGSGETIAIIGANGAGKTTL FT MRSISGVLANAPASILYRDEPIGALPAPDILARGIAMVPEGRKLFPSLNVEENLLVGNY FT GRKIDGPWTLESIFALFPILKERRNNPATALSGGQQQMVAIGRGLMSNPALLLCDEISL FT GLAPVVVRDIYGAFPLIRETGASIVIVEQDIAQALKVADRVYCMMEGRVTLSGRTADLS FT RADIHKAYFGTDHHELA" FT misc_feature complement(93234..93779) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 133.2, E-value 6.1e-37" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(93863..94630) FT /transl_table=11 FT /locus_tag="pRL120098" FT /product="putative ATP-binding ABC transporter component" FT /note="similarity:fasta; SWALL:Q89GD9 (EMBL:AP005958); FT Bradyrhizobium japonicum; ABC transporter ATP-binding FT protein; length 249 aa; id=52.1; ungapped id=52.1; FT E()=4e-39; 238 aa overlap; query 18-255 aa; subject 3-240 FT aa" FT /db_xref="GOA:Q1M505" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q1M505" FT /inference="similar to sequence:INSDC:AP005958" FT /protein_id="CAK11812.1" FT /translation="MARGLLGAPPILGGMGLAILELDGVSKKFGALTVAEQISFAVGEG FT EALGIIGPNGAGKSTLFNLITGNIPADSGSIRFLGSDVTRTPPMARCLSGMGRTFQIPQ FT PFEKLTVFENLLVAGAFGSRRREAEVSDRCAEILVDTGLIDQANVLAGSLSLLQRKRLE FT LARALATEPKLLLLDEIAGGLTEGECRSLVATIRAIHARGVAVIWIEHVLHALNSVVER FT LLVLHFGKVIGIGKPEDIMASRDVREIYLGIEI" FT misc_feature complement(93944..94498) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 139.0, E-value 1.1e-38" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(94634..95914) FT /transl_table=11 FT /locus_tag="pRL120099" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="Similar, but truncated at the N-terminus, to FT Bradyrhizobium japonicum ABC transporter substrate-binding FT protein SWALL:Q89GD8 (EMBL:AP005958) (520 aa), and similar FT to entire protein of Rhizobium loti ABC FT transporter,substrate binding protein SWALL:Q986U6 FT (EMBL:AP003011) (425 aa)" FT /note="similarity:fasta; SWALL:Q89GD8 (EMBL:AP005958); FT Bradyrhizobium japonicum; ABC transporter substrate-binding FT protein; length 520 aa; id=43.79; ungapped id=45.94; FT E()=2.5e-69; 427 aa overlap; query 4-423 aa; subject FT 103-516 aa" FT /note="similarity:fasta; SWALL:Q986U6 (EMBL:AP003011); FT Rhizobium loti; ABC transporter, substrate binding protein; FT length 425 aa; id=40.41; ungapped id=42.89; E()=1.5e-58; FT 433 aa overlap; query 3-423 aa; subject 2-421 aa" FT /db_xref="GOA:Q1M504" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q1M504" FT /inference="similar to sequence:INSDC:AP005958" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11813.1" FT /translation="MFTRRDFLKTTAATGALAVTSGLAAPAIAQDAAIKLGYVSPQTGP FT LAAFGEADKFVIDSFLATTKSMGLNYEVVVKDSQSNPNRAAEVAKELIVTDEVNLILVA FT STPETTNPVATTCEAEEMPCISTVAPWQPWFIGQQGNPGDPGSWKPFNFAYHFFWGLED FT VIAVFTNMWAQIETNKKVGGLFPNDGDGNAWGDKVVGFPPVLERMGYGLIDPGRYQNMT FT DDFSAQINAFKSGQCEIITGVVIPPDFTTFWNQAKQQGFAPKIASIGKALLFPQTVEAL FT GNAGHNLSSEVWWTPSHPFKSSLTGESTAQVADAFTKATNRPWTQPIGFAHALFELAVD FT AMKRAGDPTDGDAVAEAIAATKLDTLVGPIAWDGKGLPPFAAKNIAKTPLVGGQWRLKD FT GGGYDLVITDNKTAPNIPVGGKMEAIA" FT sig_peptide complement(95828..95914) FT /locus_tag="pRL120099" FT /note="Signal peptide predicted for pRL120099 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.989 between residues 29 and 30" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(95970..97028) FT /transl_table=11 FT /gene="tftE" FT /locus_tag="pRL120100" FT /product="putative maleylacetate reductase" FT /EC_number="1.3.1.32" FT /note="similarity:fasta; SWALL:TFTE_BURCE (SWALL:Q45072); FT Burkholderia cepacia; maleylacetate reductase; tftE; length FT 352 aa; id=52.14; ungapped id=52.29; E()=2.7e-64; 349 aa FT overlap; query 5-352 aa; subject 4-352 aa" FT /note="similarity:fasta; SWALL:Q7CWU6 (EMBL:AE008165); FT Agrobacterium tumefaciens; agr_c_4594p; length 351 aa; FT id=65.8; ungapped id=65.8; E()=3.9e-82; 348 aa overlap; FT query 5-352 aa; subject 4-351 aa" FT /db_xref="GOA:Q1M503" FT /db_xref="InterPro:IPR001670" FT /db_xref="UniProtKB/TrEMBL:Q1M503" FT /inference="similar to sequence:UniProtKB:Q45072" FT /inference="similar to sequence:INSDC:AE008165" FT /protein_id="CAK11814.1" FT /translation="MSRDFIYSGSPAHIVFGEGKSAAAGEWVEKLGCANALVLSTPQQK FT ADAEALAAQLGSLAVGVFAGAVMHTPVDVTEEAREVVLRTQADCVVSLGGGSTTGLGKA FT IAYRTDLPQIVIPTTYAGSEVTPILGQTEGGRKTTVRHASILPEVVIYDPALTLGLPVG FT MSVTSGLNAMAHAVEALYARDRNPISTLMAAEGLRAFKTSLPDIVAMPRAADVRADALY FT GAWLCGTVLGTVGMALHHKICHTLGGTFDTPHADTHAIMLPHTAAYNAAAVPELLAPVA FT DIFGGSVGGGLWDFARQIGSPLALKDLGLSEADLDRAAEIATENPYWNPRPIDRQSIRA FT LLQDAWEGTRPA" FT misc_feature complement(96015..96998) FT /note="Pfam match to entry PF00465.7 Fe-ADH, score FT 67.7,E-value 2.9e-19" FT /inference="protein motif:Pfam:PF00465.7" FT CDS complement(97025..97888) FT /transl_table=11 FT /locus_tag="pRL120101" FT /product="putative dioxygenase" FT /note="similarity:fasta; SWALL:CATA_RHOOP (SWALL:P95607); FT Rhodococcus opacus; catechol 1,2-dioxygenase; catA; length FT 270 aa; id=34.16; ungapped id=37.94; E()=6.6e-21; 281 aa FT overlap; query 11-278 aa; subject 2-267 aa" FT /note="similarity:fasta; SWALL:Q7CWU7 (EMBL:AE008165); FT Agrobacterium tumefaciens; agr_c_4592p; length 295 aa; FT id=45.07; ungapped id=47.23; E()=4.7e-47; 284 aa overlap; FT query 10-280 aa; subject 12-295 aa" FT /db_xref="GOA:Q1M502" FT /db_xref="InterPro:IPR007535" FT /db_xref="UniProtKB/TrEMBL:Q1M502" FT /inference="similar to sequence:UniProtKB:P95607" FT /inference="similar to sequence:INSDC:AE008165" FT /protein_id="CAK11815.1" FT /translation="MTPGPMALNFSEATSHDMFAQRLPPSRDNSLPQVLAAAVTHLHTL FT IREVRPTQAEWRQVIEFLTDVGHASDERRQEWVLLSDLLGASALVEEINSRRPKTATPN FT TVRGPFFRADVPQLALGSNISLDGIGETLDVSGRAQDLDGDPIANAEIITWQANAQGFY FT ENQQPDLQPEFNLRGGFRTDSDGRFHYRTIKPCGYGVPDDGPVGKLLRQAGYPLRRPAH FT LHFMIKAPGFETITTHIYDGSDPHLAEDAIFAVKPELVRTFEPRGKGWLLDLTFVMVRA FT RQGAEI" FT misc_feature complement(97046..97573) FT /note="Pfam match to entry PF00775.10 Dioxygenase_C, score FT 199.8, E-value 5.4e-57" FT /inference="protein motif:Pfam:PF00775.10" FT misc_feature complement(97583..97807) FT /note="Pfam match to entry PF04444.3 Dioxygenase_N, score FT 73.6, E-value 5.1e-19" FT /inference="protein motif:Pfam:PF04444.3" FT CDS 97984..98934 FT /transl_table=11 FT /locus_tag="pRL120102" FT /product="putative LysR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q7WNL3 (EMBL:BX640440); FT Bordetella bronchiseptica; lysr-family transcriptional FT regulator; length 307 aa; id=29.93; ungapped id=31.59; FT E()=3.5e-16; 304 aa overlap; query 1-297 aa; subject 1-295 FT aa" FT /db_xref="GOA:Q1M501" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M501" FT /inference="similar to sequence:INSDC:BX640440" FT /protein_id="CAK11816.1" FT /translation="MKIDERHLIQLAAVVKTGGVTEGAALLGLSQPAVSRTLSMLEARI FT GEPLFLKGRRPLQPTPLGRALADHGQTMLSASRKASDVVESFRAGRSGVVRVGGTPFFM FT DALIAGMIAEFQNLHPDVRIDQTYGYFPDLRAALNADQIDLAICPIDILDEGSGLEFQQ FT ILPGRNVVACRVTHPLLLKRRPQPAHLLDFPWVAPPPGSPLLTDLRSMLLSFGATEVKI FT RYSGGSLMSVVHYMKAADALTIMPHSVVFALRNEKSITALPVPIPHSERALGLLKRSDA FT PRTPAADHFARHIRTGFDNLKHLIKRHEQSVVWGA" FT misc_feature 98245..98880 FT /note="Pfam match to entry PF03466.5 LysR_substrate, score FT 115.4, E-value 1.3e-31" FT /inference="protein motif:Pfam:PF03466.5" FT CDS complement(98938..99201) FT /transl_table=11 FT /locus_tag="pRL120103" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q1M500" FT /protein_id="CAK11817.1" FT /translation="MQILIARRLTAPIYDSYIALRYHLLQCRKSVLCNCTGASHFADLQ FT IEMISRPAGDQDGQELQMSPTHSPTRPAYAPAATLMGHSPGN" FT CDS 99541..100443 FT /transl_table=11 FT /locus_tag="pRL120104" FT /product="putative LysR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q9I4K7 (EMBL:AE004543); FT Pseudomonas aeruginosa; probable transcriptional regulator; FT length 303 aa; id=50.34; ungapped id=50.34; E()=9.5e-56; FT 294 aa overlap; query 3-296 aa; subject 4-297 aa" FT /db_xref="GOA:Q1M4Z9" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z9" FT /inference="similar to sequence:INSDC:AE004543" FT /protein_id="CAK11818.1" FT /translation="MQFKRNEIHELSIFLAIVQYRSFRKAADHLEVTASALSHSMKALE FT QRLGVRLLNRTSRSVAPTAAGTALAEKISAGLELINSGLEDLNGHYQGGAGSIRINVLK FT DAAVLLLRPAIPVFQQRFPNVELEVAVDDQFVDVTADGFDAGIRYSGTIPEDMIAVPLT FT PPLKWVAVAAPDYLRSHGRPVMPEDLNSHHCIRIRTGRGQIYKWEFERGDDRREIDVPG FT ALISGETDLAINAALEGAGLCYCLERLASPYVSAGRLEVVLPKWASIGPPFSMYYSSRR FT QLPFGVDALIKIVRGLNGF" FT misc_feature 99562..99741 FT /note="Pfam match to entry PF00126.10 HTH_1, score FT 71.9,E-value 1.7e-18" FT /inference="protein motif:Pfam:PF00126.10" FT misc_feature 99601..99666 FT /note="Predicted helix-turn-helix motif with score FT 1313.000, SD 3.66 at aa 21-42, sequence FT RSFRKAADHLEVTASALSHSMK" FT misc_feature 99811..100437 FT /note="Pfam match to entry PF03466.5 LysR_substrate, score FT 142.8, E-value 7.9e-40" FT /inference="protein motif:Pfam:PF03466.5" FT CDS 100563..101459 FT /transl_table=11 FT /locus_tag="pRL120105" FT /product="putative UDP-glucose 4-epimerase" FT /note="similarity:fasta; SWALL:GAE1_ARATH (SWALL:Q42605); FT Arabidopsis thaliana; udp-glucose 4-epimerase; length 351 FT aa; id=26.82; ungapped id=29.41; E()=3.8e-06; 261 aa FT overlap; query 3-254 aa; subject 7-253 aa" FT /note="similarity:fasta; SWALL:Q92QI4 (EMBL:AL591787); FT Rhizobium meliloti; putative oxidoreductase protein; length FT 296 aa; id=72.69; ungapped id=73.19; E()=4.9e-82; 293 aa FT overlap; query 3-295 aa; subject 2-292 aa" FT /db_xref="GOA:Q1M4Z8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z8" FT /inference="similar to sequence:UniProtKB:Q42605" FT /inference="similar to sequence:INSDC:AL591787" FT /protein_id="CAK11819.1" FT /translation="MSKRIIFTGGSGKAGRHAVPYLVEKGHKVRNLDLVPLNCPGVQTL FT ITDLSDSGQTFNALSMHFSGEGLQTPGGPAKVDAVVHFAAIPSLLLKPDNQTFSVNAIS FT TYNVIEAAVKLGIPKVIIASSETTYGVCFAEGDKDFHSFPLEEDYDIDPMDSYGLSKVV FT NEKTARAFAMRSGIDIYALRIANVIEPHEYERFPGFLADPPSRKRNAWSYIDARDLGQI FT VDLCLRADGLGFQVFNAVNDTITASEPTRGFLGKWAPNTPILRELGEFEAPLSNRKIRE FT VLGFKEEHNWRKYVSGA" FT CDS 101512..102480 FT /transl_table=11 FT /locus_tag="pRL120106" FT /product="putative short-chain aldo-keto oxidoreductase" FT /note="similarity:fasta; SWALL:Q8CK46 (EMBL:AL939106); FT Streptomyces coelicolor; putative oxidoreductase; length FT 322 aa; id=61.8; ungapped id=62.18; E()=7.9e-79; 322 aa FT overlap; query 1-321 aa; subject 1-321 aa" FT /db_xref="GOA:Q1M4Z7" FT /db_xref="InterPro:IPR020471" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z7" FT /inference="similar to sequence:INSDC:AL939106" FT /protein_id="CAK11820.1" FT /translation="MKTTRLGKTGLEVSRICFGCMSFGKQTDERPWVLGLEEARPLYKR FT AWDAGINFFDTANVYAQGTSEEITGVLLKELAPRQEIVLATKVFGRMRPGPNGQGLSRA FT AILTEIDNSLRRLGTDYIDLYQIHRFDPFTPVEETMQALNDVVRAGKARYIGASSMWAW FT QFSKLQHAAEVNGWTKFVSMQNQVSLTYREEEREMLPLCSDQGIAVLPWSPLAGGKLTR FT PWGTETKRATTDRYNKSMYEKTGDRDVVEAVEAVAKARKTSMAQVAMAWVLQKPVVTSP FT IVGVSKMSHLEDAIAAVDFELTGDDVKALEAPYKSLHVAGF" FT misc_feature 101530..102456 FT /note="Pfam match to entry PF00248.9 Aldo_ket_red, score FT 256.4, E-value 4.7e-74" FT /inference="protein motif:Pfam:PF00248.9" FT CDS 102545..103369 FT /transl_table=11 FT /locus_tag="pRL120107" FT /product="putative aldo-keto reductase/oxidase" FT /note="similarity:fasta; SWALL:DKGB_ECOLI (SWALL:P30863); FT Escherichia coli; 2,5-diketo-D-gluconic acid reductase b; FT dkgB; length 267 aa; id=39.62; ungapped id=39.77; FT E()=1.9e-33; 265 aa overlap; query 10-273 aa; subject 3-267 FT aa" FT /note="similarity:fasta; SWALL:Q7QMM6 (EMBL:AAAB01003437); FT Anopheles gambiae str. PEST; agcp2010; agcg43435; length FT 330 aa; id=46.59; ungapped id=46.59; E()=1e-43; 264 aa FT overlap; query 10-273 aa; subject 67-330 aa" FT /db_xref="GOA:Q1M4Z6" FT /db_xref="InterPro:IPR020471" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z6" FT /inference="similar to sequence:UniProtKB:P30863" FT /inference="similar to sequence:INSDC:AAAB01003437" FT /protein_id="CAK11821.1" FT /translation="MTKEAMVAGIPQMGYGTWNRSADEAHQGVIWALEAGCRHIDTAQG FT YGNEQDVARGIKDAGVARNEIFITTKVKPDNYGPGAVMPSVRESLEKLRVDQVDLLLLH FT WPSPHNKYPLADYLGQFAEVFDSGLARQIGVSNFTKAMIDESIRLLDSRTITTNQVECH FT VYMQNRPIIDYCQNLGIAVTAYSPLARGAVVGDPVLEEIGKARGATSDQIALAFLIAKG FT HVVIPSSSKRGRIMQNFEARKITLTPAEIKRIEGLEKGMRLVNGDWCPVWDV" FT misc_feature 102560..103321 FT /note="Pfam match to entry PF00248.9 Aldo_ket_red, score FT 280.4, E-value 2.9e-81" FT /inference="protein motif:Pfam:PF00248.9" FT CDS 103454..104491 FT /transl_table=11 FT /locus_tag="pRL120108" FT /product="putative MocA family oxido-reductase/dehydratase" FT /note="similarity:fasta; SWALL:Q983C8 (EMBL:AP003014); FT Rhizobium loti; oxido-reductase, and dehydratase; moca; FT length 347 aa; id=44.63; ungapped id=47.23; E()=8.8e-47; FT 345 aa overlap; query 3-339 aa; subject 1-334 aa" FT /note="similarity:fasta; SWALL:Q8VV02 (EMBL:AB061860); FT Streptomyces griseus; putative oxidoreductase; orf3; length FT 341 aa; id=48.63; ungapped id=49.38; E()=2.4e-57; 329 aa FT overlap; query 3-329 aa; subject 1-326 aa" FT /db_xref="GOA:Q1M4Z5" FT /db_xref="InterPro:IPR002345" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z5" FT /inference="similar to sequence:INSDC:AP003014" FT /inference="similar to sequence:INSDC:AB061860" FT /protein_id="CAK11822.1" FT /translation="MNMDYRKLGPSGTVVTAYCLGTMTFGAEADEAASHKLLDDYFAWG FT GNFIDTADVYSAGKSEEIIGRWLKARPTEARQAIVATKGRFPMGNGPNDIGLSRRHLSQ FT ALDDSLRRLGLEQIDLYQMHAWDALTPIEETLRFLDDAVSSGKIGYYGFSNYVGWHIAK FT ASEIAKARGYTRPVTLQPQYNLLVRDIELEIVAACQDAGMGLLPWSPLGGGWLTGKYKR FT DEMPTGATRLGENPNRGGESYAPRNAMERTWAIIAVVEEIAKAHGVSMAQVALGWTAAQ FT PAITSVILGARTPEQLADNLGAMKLKLSDDDMARLNEVSAPQPFDYPYGKGGINQRHRK FT IEGGR" FT misc_feature 103478..104416 FT /note="Pfam match to entry PF00248.9 Aldo_ket_red, score FT 230.8, E-value 2.4e-66" FT /inference="protein motif:Pfam:PF00248.9" FT CDS 104581..105717 FT /pseudo FT /transl_table=11 FT /locus_tag="pRL120109" FT /note="Similar to codons 165 to 370 of Streptomyces FT avermitilis putative transport protein SWALL:Q827M4 FT (EMBL:AP005048) (403 aa)" FT /note="similarity:fasta; SWALL:Q827M4 (EMBL:AP005048); FT Streptomyces avermitilis; putative transport protein; FT length 403 aa; id=35.02; ungapped id=35.93; E()=2.1e-13; FT 197 aa overlap; query 12-204 aa; subject 171-366 aa" FT /note="putative transport protein, pseudogene" FT /inference="similar to sequence:INSDC:AP005048" FT misc_feature 104794..105075 FT /note="Pfam match to entry PF07690.1 MFS_1, score FT 33.8,E-value 2.1e-09" FT /inference="protein motif:Pfam:PF07690.1" FT misc_feature order(104821..104883,104902..104970,104980..105048) FT /locus_tag="pRL120109" FT /note="3 probable transmembrane helices predicted at aa FT 10-30, 37-59 and 63-85" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(105142..105978) FT /pseudo FT /transl_table=11 FT /locus_tag="pRL120110" FT /note="N-terminus to codon 195 is similar to the N-terminus FT to codon 195 Methanosarcina mazei putative ketoreductase FT SWALL:Q8PS57 (EMBL:AE013581) (236 aa)" FT /note="similarity:fasta; SWALL:Q8PS57 (EMBL:AE013581); FT Methanosarcina mazei; putative ketoreductase; length 236 FT aa; id=40.1; ungapped id=40.95; E()=2.1e-18; 192 aa FT overlap; query 3-193 aa; subject 2-190 aa" FT /note="putative ketoreductase, pseudogene" FT /inference="similar to sequence:INSDC:AE013581" FT misc_feature complement(105178..105954) FT /note="Pfam match to entry PF00106.11 adh_short, score FT 161.8, E-value 1.4e-45" FT /inference="protein motif:Pfam:PF00106.11" FT CDS 106131..107438 FT /transl_table=11 FT /locus_tag="pRL120111" FT /product="putative exported binding protein transporter FT component" FT /note="similarity:fasta; SWALL:Q829V1 (EMBL:AP005046); FT Streptomyces avermitilis; putative secreted protein; length FT 440 aa; id=27.77; ungapped id=30.26; E()=3.3e-27; 450 aa FT overlap; query 11-435 aa; subject 1-438 aa" FT /db_xref="GOA:Q1M4Z4" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z4" FT /inference="similar to sequence:INSDC:AP005046" FT /protein_id="CAK11825.1" FT /translation="MTNSSGFTHEIRRRTLLAGAGSAALMALAGSANAQDSVSGELVVL FT NWLGGSELDMMHQIQNAFTAKYPKVTIREVAITGQGDMRGGIRTALMGGEVVDVLYNTW FT PAFRKELLDAGMLRPIDDQWKSFGWDRLISQSWKDLGAIAGKTYGLTYTFGNRSGIWYK FT KEHLAKAGITEPPRSWDEFVASFAKLTKAGFAAPVAIPGKYWAHAEWFETLLLRTAGVE FT TASKLGAHEISWTDPAVKNALTKYAEMLTAGCCGAPNSMLANDWDGEADQIFQANSKNY FT LLIGMWMNNRAKNDYKLTEGKDYGLFQFPALGMGHDDTSSVDTKELLVTANGPNPKAAD FT AFLDFWTSAEAANILAKNGYASPSSNTDTSLYGETQKVATSAVASSKLQFVLGDLLPGD FT LVDEYRVQLQKFLQDPSDANIDSVLAAIETKAQGSY" FT sig_peptide 106131..106232 FT /locus_tag="pRL120111" FT /note="Signal peptide predicted for pRL120111 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.998 between residues 34 and 35" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 106170..107189 FT /note="Pfam match to entry PF01547.11 SBP_bac_1, score FT 72.8, E-value 9.3e-19" FT /inference="protein motif:Pfam:PF01547.11" FT CDS 107438..108397 FT /transl_table=11 FT /locus_tag="pRL120112" FT /product="putative transmembrane component of transporter" FT /note="similarity:fasta; SWALL:Q82DJ6 (EMBL:AP005041); FT Streptomyces avermitilis; putative binding FT protein-dependent transporter; length 350 aa; id=31.29; FT ungapped id=31.94; E()=1.3e-27; 294 aa overlap; query FT 18-308 aa; subject 38-328 aa" FT /db_xref="GOA:Q1M4Z3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z3" FT /inference="similar to sequence:INSDC:AP005041" FT /protein_id="CAK11826.1" FT /translation="MAGTSASPAREAAGVMQVSPLAVSIEGRRRLLRDTPAALILIAPV FT IVLFALAVVYPLVETIRLSFWDIQGLRKPSFIGFGNYVRLFSDAAFRSTLLTTLIFTIG FT TTVISVSIGWALAMTCAFAPRQTLPFRVMIFAAFGISEAVSGYMWIGIYRADAGGLLNS FT LIQLFGFSGFSHAWLGDANTALWALIIAASWSGVGLPLMLIFAAIQAIPKSVLEAAYMD FT GAKPLSTMRHIMMPLSMPGVRVAVFINLLGALRAFDIIYILTGGGPVRSTETVGYFMYR FT ESMTQFKLGYGAAATVILLLAVLIVSIPAIIQRTAGAK" FT misc_feature order(107543..107611,107720..107788,107825..107893, FT 107906..107974,107993..108061,108131..108199, FT 108302..108370) FT /locus_tag="pRL120112" FT /note="7 probable transmembrane helices predicted at aa FT 36-58, 95-117, 130-152,157-179, 186-208, 232-254 and FT 289-311" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 107708..108388 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 40.2, E-value 5.8e-09" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 108394..109215 FT /transl_table=11 FT /locus_tag="pRL120113" FT /product="putative transmembrane transporter component" FT /note="similarity:fasta; SWALL:Q9L055 (EMBL:AL939114); FT Streptomyces coelicolor; putative integral membrane FT transport protein; length 305 aa; id=34.23; ungapped FT id=34.76; E()=1.4e-31; 260 aa overlap; query 9-264 aa; FT subject 39-298 aa" FT /db_xref="GOA:Q1M4Z2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z2" FT /inference="similar to sequence:INSDC:AL939114" FT /protein_id="CAK11827.1" FT /translation="MIGKAPRWIVIFVGIIACIWVIPIAGIVVTSLRPPEGVSLGWWHF FT ERFDLTFDAWHRVWDKYPLSQSMWVTMKTAGIATALTMVLTPAAAYAFHFLNFPFRRIL FT LIIIINAFVLPQQVVIIPLFTLWRDLGLIDNILSVLIPYVGMSFAWSIFLVKNFFEDFP FT RELVEAAKIDGCGPIATFRHVVLPNSLSPIFAVGILQFLWTWNALLLPMLFLRNDVPLP FT VLLARISGSYEINWDLRSVAAIITTIVPLLVFLVFQRQFAAGSQTRTGAKE" FT misc_feature order(108412..108480,108613..108681,108700..108768, FT 108796..108855,108970..109038,109096..109164) FT /locus_tag="pRL120113" FT /note="6 probable transmembrane helices predicted at aa FT 7-29, 74-96, 103-125, 135-154,193-215 and 235-257" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 108583..109194 FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 68.0, E-value 2.6e-17" FT /inference="protein motif:Pfam:PF00528.10" FT CDS 109220..111271 FT /transl_table=11 FT /locus_tag="pRL120114" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="GOA:Q1M4Z1" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z1" FT /protein_id="CAK11828.1" FT /translation="MPNTTNKPLRYRQIHLDFHTSEHIPGIGVDFDPDIFVSTLKAAHV FT DSITIFAKCHHGWSYYPTKVGKPHPRLARPDLLGDMVKALSAADIESPIYISVQWDELT FT AREHPEWRAMTASNQYHHDRPDDPSAGKQLSPAWHTLCLNHAGLRKYILDQAREVAQSY FT PTQGLFFDIILTPDCVCPACIERMQCEGLDPENSADRLKNDEAVNEQFRRETSEALFKE FT FPNLRVFYNCGHIHKQGPKRFSTYSHLELESLPTGGWGYDHFPSSARYAATLGMDFLAH FT TGKFHTSWGEFGGFKHPDALEYECAQMIALGSKCLVGDQLHPNGAINPDTYASIAPAYR FT RVEKLEPFLDGAKQVSEIAILSAEHMNPKGARNHPSDDGAAQMLQELKRPFDVLDSSAR FT FEEYRLLILPDEIPVDAALAARLKAYLAGGGKIIASWHSGIGEDGAFAVDFGIERQATP FT IASRPSYVKAGKDLDPSMPKTAFVFYDEAETVRAVGATVLAGIYPSYFNRSYKHFCSHQ FT HAPDDTAADMLGAAVTEHGGIAYIAYPIFRLYRAIGQPLYKYVVRGLLDRLVPDPAMVT FT DLPSSGRATLTRQIGHNRHILHLLYGPPQIRGKDVRGDDGSRRVMEMIEDIPAIGPVNA FT SVRLPAKPKRVFDAMTGEDLAWEAGADGAISITVPRLHIHSAVVFEGV" FT CDS 111412..112446 FT /transl_table=11 FT /locus_tag="pRL120115" FT /product="putative transcriptional regulator" FT /note="similarity:fasta; SWALL:Q7CPC1 (EMBL:AE008891); FT Salmonella typhimurium; galr/laci family transcriptional FT repressor; cytR; length 341 aa; id=30.81; ungapped FT id=31.28; E()=6.2e-27; 331 aa overlap; query 14-341 aa; FT subject 10-338 aa" FT /note="similarity:fasta; SWALL:Q92TW4 (EMBL:AL591985); FT Rhizobium meliloti; putative transcriptional regulator,laci FT family protein; length 339 aa; id=32.53; ungapped id=33.12; FT E()=6e-30; 332 aa overlap; query 16-343 aa; subject 1-330 FT aa" FT /db_xref="GOA:Q1M4Z0" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q1M4Z0" FT /inference="similar to sequence:INSDC:AE008891" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11829.1" FT /translation="MRQTDRTAGKRRGATIIDVARVADVAVGTVSRYLNGETIRRSNRE FT QIERAIQDLGYRRNAAAASIRTDLTHMIGFLVPTFDEFHARMLEYLAISVRQTGRALLT FT YCHGGDPRVVAEALDFFAAQRVDALVMDGTAEVYDRVDDLIHHDIPIIFYNNDVRGLAA FT DRVMVENHRASYRLISHLIDLGHTRIGMLTGDPRNSSGIERLAGYEQALRDRGIVVDAS FT LAVRGNWRMDGGYEATKRLMSLESPPTAIFSANYGMAVGALSWLKENGRHVPDDISLAS FT FDDVAIFRLYEAGITAVAQPVASIAETITDILVERLTEPSGGATRSVVLECDIILRGST FT RRIT" FT misc_feature 111451..111516 FT /note="Predicted helix-turn-helix motif with score FT 1479.000, SD 4.22 at aa 61-82, sequence FT ATIIDVARVADVAVGTVSRYLN" FT misc_feature 111619..112425 FT /note="Pfam match to entry PF00532.8 Peripla_BP_1, score FT 59.6, E-value 8.6e-15" FT /inference="protein motif:Pfam:PF00532.8" FT CDS 112484..113587 FT /transl_table=11 FT /locus_tag="pRL120116" FT /product="putative ATP-binding protein transporter protein" FT /note="similarity:fasta; SWALL:LACK_AGRRD (SWALL:Q01937); FT Agrobacterium radiobacter; lactose transport ATP-binding FT protein LacK; lacK; length 363 aa; id=57.57; ungapped FT id=59.04; E()=1.5e-63; 363 aa overlap; query 1-354 aa; FT subject 1-363 aa" FT /note="similarity:fasta; SWALL:Q92XF6 (EMBL:AL591985); FT Rhizobium meliloti; probable lactose transport ATP-binding FT protein; lack1; length 358 aa; id=56.66; ungapped id=58.12; FT E()=2e-67; 360 aa overlap; query 1-354 aa; subject 1-357 FT aa" FT /db_xref="GOA:Q1M4Y9" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y9" FT /inference="similar to sequence:UniProtKB:Q01937" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11830.1" FT /translation="MASVELHDIDKSYGSFEAIEGLNLSVDDGSFTVFVGPSGCGKSTL FT LRMIAGLEKITAGDLKIDGRRMNEADPIERGVAMVFQNYALYPHMTVEQNIGFSLRMAG FT LGKSEIQRSVAVAAATLQIEPLLKRKPAQLSGGQRQRVAIGRAIVRNPAVFLFDEPLSN FT LDAELRVSMRVEIAKLHRRIGATMIYVTHDQTEAMTLADKIVVMRAGKIEQTGTPDTLY FT ADPDNLFVAGFIGSPRMNFLDGTLDPNGVVRLDCGAVFKTGLLHGAGDIPIKAGIRPEH FT FTGRDDAGGAIDLKVDVVENLGGTRFIYGTLNSGQAVIIEDRSETIRRPGETVTAGFPA FT RRALLFSADGERIRETRPENTLPAAWP" FT misc_feature 112568..113113 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 213.6, E-value 3.8e-61" FT /inference="protein motif:Pfam:PF00005.11" FT misc_feature 113339..113518 FT /note="Pfam match to entry PF03459.4 TOBE, score FT 26.5,E-value 1.4e-06" FT /inference="protein motif:Pfam:PF03459.4" FT CDS 113584..115827 FT /transl_table=11 FT /locus_tag="pRL120117" FT /product="conserved hypothetical protein" FT /note="Similar to Xanthomonas campestris hypothetical FT protein xcc1756 SWALL:Q8P9U1 (EMBL:AE012277) (790 aa)" FT /note="similarity:fasta; SWALL:Q8P9U1 (EMBL:AE012277); FT Xanthomonas campestris; hypothetical protein xcc1756; FT length 790 aa; id=55.91; ungapped id=56.37; E()=4.2e-161; FT 735 aa overlap; query 6-738 aa; subject 47-777 aa" FT /db_xref="GOA:Q1M4Y8" FT /db_xref="InterPro:IPR016518" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y8" FT /inference="similar to sequence:INSDC:AE012277" FT /protein_id="CAK11831.1" FT /translation="MTAHLLWYDTPAQLWTDALPLGNGRLGAMVFGDPLREHLQINEAT FT FWAGGPYQPVNPDAFGHLETVRQLIFDCRYADAEALAEKHLMARPIKQMSYQPIGDLHL FT EFDHRESVSGYRRALDLDTAIATSSYTADGIAYLREAFVSPVDGVLVLRLSADRKRAIN FT CRISIDSPQQGEMRIGQGSQLSFSGKGKAESGIAAALRFAFGVRLINSGGTVNASGGAL FT SVEGADEVLVFLDAATSFRRYDDVLGHPERDIVDRLESAVSRDFVSLRDDHIEEHRRLF FT SAFAIDLRSTPAASLPTDQRIAGFAGGDDPALAALYVQFGRYLMIASSRPGTQPANLQG FT IWNAETDPPWGSKYTANINLQMNYWLPAPANLPECLEPLVEMAEELAETGKAMAHVHYR FT ARGWVMHHNTDLWRATGPIDGAKWGLWPTGGIWLMAQLLDACDYLDDAEAMRRRLFPIA FT REAAHFLFDVLVPFPGTDHLVTNPSLSPENAHPHGASICAGPAMDSQLIRDFLGLLRPL FT AVSIGGEPDLVADIDRVLPRLAPDRIGANGQLQEWLEDWDMQAPEMHHRHVSHLYGLYP FT SWQIDMDKTPELAAAARRSLEIRGDDATGWGIGWRINLWARLRDGNHAHNVLKLLLTPE FT RSYKNLFDAHPPFQIDGNFGGAAGIVEMLVQSRPGEIHLLPALPTAWPGGSIRGLRLRG FT GMLLDLDWEDGEPLTIRLTASRNVSSILRFGQTRRKVDLAAGESFFGGGSEFR" FT CDS 116168..117097 FT /transl_table=11 FT /locus_tag="pRL120118" FT /product="putative aldo-keto reductase/oxidoreductase" FT /note="similarity:fasta; SWALL:Q9F3N2 (EMBL:AL939132); FT Streptomyces coelicolor; putative oxidoreductase; length FT 310 aa; id=62.37; ungapped id=62.98; E()=2.2e-73; 311 aa FT overlap; query 1-309 aa; subject 1-310 aa" FT /db_xref="GOA:Q1M4Y7" FT /db_xref="InterPro:IPR020471" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y7" FT /inference="similar to sequence:INSDC:AL939132" FT /protein_id="CAK11832.1" FT /translation="MKTYTLPQTDLNVSSIILGMMRISNMSNGEIQQLVDGARDAGVTF FT FDHADVYGGAPHRCEARFGEAISLTAAEREKLVIQSKVGIREGFFDFSAEHILASVDQS FT LAALKTDYLDVLLLHRPDTLVEPEEVAAAFDTLKSAGKVRHFGVSNHTPGQVELLKTAV FT KQPLIVNQVQLSITHAPLIASGVAANMAGLDQSIDRDNGLLDYSRINGMMLQAWSPFQK FT GFFDGVFLGDNENFADLNGAIDELAKAYGVTPTGIAVAWITRHPAKIQVVLGTTKPERV FT VEAAAGSSISMTREEWYRLFRAAGHTLP" FT misc_feature 116183..117082 FT /note="Pfam match to entry PF00248.9 Aldo_ket_red, score FT 148.1, E-value 2e-41" FT /inference="protein motif:Pfam:PF00248.9" FT CDS complement(117411..118196) FT /transl_table=11 FT /locus_tag="pRL120119" FT /product="putative short-chain dehydrogenase" FT /note="similarity:fasta; SWALL:Q9L9F8 (EMBL:AF170880); FT Streptomyces sphaeroides; NovJ; length 262 aa; id=37.75; FT ungapped id=39.16; E()=5.7e-19; 249 aa overlap; query FT 10-256 aa; subject 19-260 aa" FT /note="similarity:fasta; SWALL:Q7WEE9 (EMBL:BX640451); FT Bordetella bronchiseptica; putative short chain FT dehydrogenase; length 261 aa; id=64.36; ungapped id=64.36; FT E()=1.4e-56; 261 aa overlap; query 1-261 aa; subject 1-261 FT aa" FT /db_xref="GOA:Q1M4Y6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y6" FT /inference="similar to sequence:INSDC:AF170880" FT /inference="similar to sequence:INSDC:BX640451" FT /protein_id="CAK11833.1" FT /translation="MDLGLKGKTALVLGAGGGLGGAIAKTLAVEGARIAVADINREAAE FT KTVTDIRTAGGLAMALQWDLAELGVIEPNLAAIDEQLGSVDVLVNITGGPPPTLVSGQN FT AESWRKYFDSMVLSVIAISDAVLPRMREKKWGRIITSTSSGVVAPIPNLGLSNALRMSL FT LGWSKTLAGEVGRDGVTVNVVLPGRVATQRIAFLDEQKAKREGKAVEEVSAASTASIPV FT GRYGEPQEYADVVAFMASSRASYLTGSVIRVDGGLISSV" FT misc_feature complement(117426..118169) FT /note="Pfam match to entry PF00106.11 adh_short, score FT 152.4, E-value 9.9e-43" FT /inference="protein motif:Pfam:PF00106.11" FT CDS complement(118244..119017) FT /transl_table=11 FT /locus_tag="pRL120120" FT /product="putative short-chain dehydrogenase" FT /note="similarity:fasta; SWALL:HCDR_XANP2 (SWALL:Q56840); FT Xanthobacter sp.; 2-; xecD; length 249 aa; id=40.55; FT ungapped id=42.38; E()=1.1e-27; 254 aa overlap; query 7-256 FT aa; subject 2-248 aa" FT /note="similarity:fasta; SWALL:Q930L5 (EMBL:AE007211); FT Rhizobium meliloti; putative; length 258 aa; id=42.47; FT ungapped id=44.71; E()=1.5e-30; 259 aa overlap; query 3-256 FT aa; subject 6-256 aa" FT /db_xref="GOA:Q1M4Y5" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y5" FT /inference="similar to sequence:UniProtKB:Q56840" FT /inference="similar to sequence:INSDC:AE007211" FT /protein_id="CAK11834.1" FT /translation="MPLLDRKIAIVTGASSGLGRAIALRYAEEGAVVVIADVSEAPIEG FT GETTLSCIVAAGGKGMFVRTDISNWADVDALVSQTVKEFGRLDIMVNNAAIYTSTNLLE FT TSPQQWDRVIAVNVTGFFYCCKRAAQQFLAQEPTGETRGRIINISSQHGMVACPGDFPY FT GVSKGAVVQMTRQIAVDHAATGIVCNAIAPGKIVTGKPGVANDPDALDYSRRRTPWPRL FT GEPHDVASAALFLASDMASYMTGVNLMVDGGWMAG" FT misc_feature complement(118256..118993) FT /note="Pfam match to entry PF00106.11 adh_short, score FT 250.0, E-value 4.2e-72" FT /inference="protein motif:Pfam:PF00106.11" FT CDS complement(119028..120362) FT /transl_table=11 FT /locus_tag="pRL120121" FT /product="putative dihydroorotase" FT /note="similarity:fasta; SWALL:PYRC_STRCO (SWALL:Q9KXR3); FT Streptomyces coelicolor; dihydroorotase; pyrC; length 428 FT aa; id=31.97; ungapped id=33.81; E()=1.5e-29; 441 aa FT overlap; query 1-431 aa; subject 1-427 aa" FT /note="similarity:fasta; SWALL:Q8G1P4 (EMBL:AE014373); FT Brucella suis; dihydroorotase, multifunctional complex FT type; pyrc-1; length 444 aa; id=33.93; ungapped id=35.52; FT E()=6.7e-42; 445 aa overlap; query 2-440 aa; subject 5-435 FT aa" FT /db_xref="GOA:Q1M4Y4" FT /db_xref="InterPro:IPR006680" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y4" FT /inference="similar to sequence:UniProtKB:Q9KXR3" FT /inference="similar to sequence:INSDC:AE014373" FT /protein_id="CAK11835.1" FT /translation="MFDTLITGGMVVNASGQLPADIGILDGVVVALLAPGEPAMARGFI FT NASGKMVLPGLVDAHVHLREPGMTQKEDFESGTHAAALGGVTTILDMPTDDPWTATAQQ FT LSDKMASAAGGIHVDVGFQAVVSKSYDSLEDLLALSPVSLELFTADVPVDYRFDSLDAV FT TEMLRRLAGTGAVIGVSPGDQSILEGTGLRERSVGIPAFLASRPPLAEAGGIARAVLAA FT AETGARVHVRQINSRLGVETWRRLRSMADVTVETTPQNLFFTSDDYESEGARLKGSPPF FT RGRDDVAALRRAVSEGLITIMATDHAPHSPAEKSAVYGSFADIPGGMPGLQTLLSVMLD FT LVAEKVIGLTDLVRICAYNPAHRFGLGRSKGSIAVGSDADILIVDMDRSAVITNTEQAS FT RAAYSPFHGKRTAGRLTDVFLRGARIVKDGTLINPRRGQVVRRTA" FT misc_feature complement(119208..120212) FT /note="Pfam match to entry PF01979.7 Amidohydro_1, score FT 48.8, E-value 1.6e-11" FT /inference="protein motif:Pfam:PF01979.7" FT CDS complement(120380..122071) FT /transl_table=11 FT /locus_tag="pRL120122" FT /product="putative thiamine pyrophosphate requiring enzyme" FT /note="similarity:fasta; SWALL:ILVI_ECOLI (SWALL:P00893); FT Escherichia coli; acetolactate synthase isozyme iii large FT subunit; ilvI; length 574 aa; id=29.89; ungapped id=31.6; FT E()=1e-35; 552 aa overlap; query 20-551 aa; subject 4-545 FT aa" FT /note="similarity:fasta; SWALL:Q7WBZ5 (EMBL:BX640424); FT Bordetella parapertussis; thiamine pyrophosphate enzyme; FT length 568 aa; id=42.5; ungapped id=44.05; E()=4.8e-82; 567 FT aa overlap; query 10-560 aa; subject 2-564 aa" FT /db_xref="GOA:Q1M4Y3" FT /db_xref="InterPro:IPR012000" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y3" FT /inference="similar to sequence:UniProtKB:P00893" FT /inference="similar to sequence:INSDC:BX640424" FT /protein_id="CAK11836.1" FT /translation="MADGTHALPNGHLPAEAKTMSGAEYVAGVLKEEGVKQIIGFPASE FT LFDASAALDIPPLIARTQRVAVNIAEGYARATAGRELAVVTVQYGPGAESAFAGIAQAF FT NDRVPMLFLPTGYPRGSEAIAPNFESRRNFRHITKWCEAATQVDDLPKLMHAAISRVRN FT GPPAPVLLELPVDLLAERLDALPADHRRPRRSVPQAGDREVVDLAESLLAAKNPVILAG FT QGVLSASATPELIELAELLNIPVMTTPNGKSAFPEDHPLALGTAGRARPATVDHFLAKA FT DLVFALGSSLTRSYYILPVPEDKTILHVTLDDADLGKDYAIAQGVVADAASVLKQMIAL FT IRRVHLPLGERQQPAAEIAAVRAAFMEKWMPLLTSDSTPISPYRVVWEIMQAIDPKTSI FT VTHDAGNPRDQFCPFYLASTPGSYIGWGKTTQLGSGLGFAMGARLARPDATVVNLMGES FT AFGMVGIDFETAVRCNLPVLTIVLRNNVLGGYAKSMPIATTKYGANRVTGSYAPIAEAL FT GGYAECVVDPEMLRPALLRALDKVKAGQAALIEVVTHEESRLAGLW" FT misc_feature complement(121034..121465) FT /note="Pfam match to entry PF00205.10 TPP_enzyme_M, score FT 98.2, E-value 2.1e-26" FT /inference="protein motif:Pfam:PF00205.10" FT misc_feature complement(121514..122014) FT /note="Pfam match to entry PF02776.6 TPP_enzyme_N, score FT 40.2, E-value 2.2e-11" FT /inference="protein motif:Pfam:PF02776.6" FT CDS complement(122064..122975) FT /transl_table=11 FT /locus_tag="pRL120123" FT /product="putative polysaccharide deacetylase" FT /note="similarity:fasta; SWALL:Q7W1J8 (EMBL:BX640425); FT Bordetella parapertussis; putative polysaccharide FT deacetylase; length 308 aa; id=42.03; ungapped id=43.2; FT E()=8.6e-45; 295 aa overlap; query 11-303 aa; subject FT 13-301 aa" FT /db_xref="GOA:Q1M4Y2" FT /db_xref="InterPro:IPR002509" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y2" FT /inference="similar to sequence:INSDC:BX640425" FT /protein_id="CAK11837.1" FT /translation="MMSAAAKDQSRDFVGYGPNPPVISWPGGVTLAINLVLNYEEGAEY FT SWLEDGRNDNWGEYNIPNSPPLRDLGTETHFEYGSRAGVWRLARLFDRYDIPVTISACA FT VALEKNPAVVDWMNARGHDLLGHGLRWSEYSGMPRDEEERQLHEALALYEKLTGIRPLG FT WNCRSFPSVNTRDLIVREGGFLYYSDPCNDDLPYFLDHEGTKLLVVPYSKTLNDSRYLI FT APGYSNPRDFAEDCRSAIDYMIGEADETGGRMLTIGVHARWMGQPNRASGLRDVIEHVK FT KTPGAAFMRREDIARYWIDHHG" FT misc_feature complement(122415..122894) FT /note="Pfam match to entry PF01522.9 Polysacc_deac_1, score FT 13.3, E-value 2.3e-05" FT /inference="protein motif:Pfam:PF01522.9" FT CDS complement(122972..123973) FT /transl_table=11 FT /locus_tag="pRL120124" FT /product="putative NAD-dependent epimerase/dehydratase" FT /note="similarity:fasta; SWALL:Q7WE37 (EMBL:BX640451); FT Bordetella bronchiseptica; thymidine diphosphoglucose FT 4,6-dehydratase; length 326 aa; id=32.91; ungapped FT id=35.33; E()=5.4e-15; 322 aa overlap; query 4-322 aa; FT subject 16-318 aa" FT /db_xref="GOA:Q1M4Y1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y1" FT /inference="similar to sequence:INSDC:BX640451" FT /protein_id="CAK11838.1" FT /translation="MSVLAREWLERDAKARVVILDRAGLDAMAERYFAPVRDRLTVVTA FT DICEPTQWEAALDDHDIRYVVHGATVTPISRGSAAEAKRQPEAEDPARIIDVNFMGTVH FT VLEWLRKRPGFQRLVFVSSGSVYRHHGPDWMGEPLPEDGYVAPLTLYGISKFAAEMVVN FT RYADLFGLSAASVRLASVYGPMDRVTGSRNFRHVPNRVAHMALAGETVRPNSLEPVGDY FT VTSTDVADAIIALLLAERLRYRHYNIGSGETSTIGDIIGWAKERAPSLQVEVSPADTAN FT VIQDVSLKDGMWGAYDIARIARDTGWQPRSARQSFHDYMDWIVENENQSEGK" FT CDS complement(124043..124804) FT /transl_table=11 FT /locus_tag="pRL120125" FT /product="putative short-chain dehydrogenase" FT /note="similarity:fasta; SWALL:Q6VQY7 (EMBL:AY331258); FT Pseudomonas paucimobilis; LinC; length 250 aa; id=39.91; FT ungapped id=40.4; E()=4.8e-23; 248 aa overlap; query 5-250 FT aa; subject 1-247 aa" FT /note="similarity:fasta; SWALL:Q7WLJ7 (EMBL:BX640442); FT Bordetella bronchiseptica; probable short chain FT dehydrogenase; length 255 aa; id=38.55; ungapped id=39.66; FT E()=1.1e-25; 249 aa overlap; query 7-249 aa; subject 4-251 FT aa" FT /db_xref="GOA:Q1M4Y0" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4Y0" FT /inference="similar to sequence:INSDC:AY331258" FT /inference="similar to sequence:INSDC:BX640442" FT /protein_id="CAK11839.1" FT /translation="MTTPMSRLEGKVIFLTGAASGIGAAIARRCIDEKAFVICADQSLD FT GADALAKSLGPQALGIRCEVTESGSVKRAVETSLEHFGRLDGLVHNAAAPSMDGTVIDL FT AAPQWQLEIDVILTGAFLASKHTLPAMIEGGGGSVVFIASQFAHVATGKAVAYCAAKAG FT LVHLAKAMAVDHAADGIRVNSLSPGAVATPRLLQRWPDLDAANAGLGPAHLLGRIGQPE FT EIAAATAFLLSSDASFVTGTDLLADGGYATR" FT misc_feature complement(124055..124768) FT /note="Pfam match to entry PF00106.11 adh_short, score FT 217.3, E-value 3e-62" FT /inference="protein motif:Pfam:PF00106.11" FT CDS complement(124801..126234) FT /transl_table=11 FT /locus_tag="pRL120126" FT /product="putative D-hydantoinase" FT /EC_number="3.5.2.2" FT /note="similarity:fasta; SWALL:HYDA_BURPI (SWALL:Q8VTT5); FT Burkholderia pickettii; D-hydantoinase; length 457 aa; FT id=40.7; ungapped id=41.15; E()=5.8e-67; 457 aa overlap; FT query 8-463 aa; subject 2-454 aa" FT /note="similarity:fasta; SWALL:Q89PZ7 (EMBL:AP005947); FT Bradyrhizobium japonicum; D-hydantoinase; length 489 aa; FT id=45.23; ungapped id=45.53; E()=3.3e-81; 462 aa overlap; FT query 3-461 aa; subject 1-462 aa" FT /db_xref="GOA:Q1M4X9" FT /db_xref="InterPro:IPR011778" FT /db_xref="UniProtKB/TrEMBL:Q1M4X9" FT /inference="similar to sequence:UniProtKB:Q8VTT5" FT /inference="similar to sequence:INSDC:AP005947" FT /protein_id="CAK11840.1" FT /translation="MTLAEPYDLVIRRGRVVLPDATKQIDIGVRDGVIAALGPDLPEGK FT HEVAAEGRIVLPGGVDSHCHMDQQPWEGKATADDFNTGTLSAMCGGTTTVVPFAMQMRG FT QSLRDIVEDYHERARSKAHIDYGFHLIVGDPSAEVLRDEIPRLIAEGCTSIKIYLTYDG FT LKLDDYEVLNVLDLARAQGAMVMVHAENDACIRWLTEKFIAARKTELRYHEKAHSAIGD FT REATFRAISLSELIETPILVSHVAAGGAVEEIRRAKARGLPIYAETCPQYLFLSAEDID FT THDLSGSKCVCTPPPRDKSNQPAIWAGILDGTLEVFSSDHSPWHYADKIAGGPGTPFHR FT IPNGIPGIETRLALLFSAGVNGGLISLQKFADLTSGAPARLFGLAPRKGQIAVGADADI FT AIWDPDRSVTITNSLLHHATDYTPYEGQVVKGWPIMTISRGDIVWKDGKILAEPGRGQF FT IARERPFPPQQGLSKVLAS" FT misc_feature complement(125026..126075) FT /note="Pfam match to entry PF01979.7 Amidohydro_1, score FT 31.7, E-value 2.2e-06" FT /inference="protein motif:Pfam:PF01979.7" FT CDS complement(126231..127493) FT /transl_table=11 FT /locus_tag="pRL120127" FT /product="putative MFS family transporter" FT /note="similarity:fasta; SWALL:Q8U9I7 (EMBL:AE009305); FT Agrobacterium tumefaciens; mfs permease; length 429 aa; FT id=29.8; ungapped id=31.92; E()=4.5e-14; 406 aa overlap; FT query 19-416 aa; subject 5-391 aa" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1M4X8" FT /inference="similar to sequence:INSDC:AE009305" FT /protein_id="CAK11841.1" FT /translation="MMRDPDRTIGDFWRKAAGLRAILHVMASICIVATGNSLLTTTVSL FT HLSDPAIDPHVVQLLLTAFPIGFLAGCLSARFMVVRFGHERAFLAVALLAAFGACGYML FT TEVAPVWFCLRLINGFSIATLFVVSESWINLYADQKNRGAYFSLYMLMTSLATLFAQLL FT VEAAGATSPHLFQIALGVILLGLIYARFVGGPWPVLRLPLAVTVDAGNAHSGHRYGIWR FT LAALAPVAVVCVFQAGMTNMNVYTMTPIYAERVHLDAAVAVTLVTAFSLGGMLAQAPVG FT WLSDRMDRRVLLLLQGLAGTGLCAAIAWPGSYPQMLLYGLFFAYGAIALTIYPVGIAYA FT NSQLDSRHMVSASGSLLLLYSIGNIMTPGLAAQLMELFAPQALFLLLGSGAFLVAATAC FT FNLLRRPIGAAKPCFTTGGNE" FT misc_feature complement(join(126285..126353,126381..126440, FT 126477..126545,126555..126623,126648..126716, FT 126774..126842,126903..126971,126999..127067, FT 127086..127154,127167..127235,127254..127322, FT 127365..127433)) FT /locus_tag="pRL120127" FT /note="12 probable transmembrane helices predicted at aa FT 21-43, 58-80, 87-109, 114-136,143-165, 175-197, 218-240, FT 260-282, 291-313, 317-339,352-371 and 381-403" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(126366..127421) FT /note="Pfam match to entry PF07690.1 MFS_1, score FT 77.8,E-value 2.9e-20" FT /inference="protein motif:Pfam:PF07690.1" FT CDS complement(127493..129547) FT /transl_table=11 FT /locus_tag="pRL120128" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q986I0 (EMBL:AP003011); FT Rhizobium loti; ABC transporter ATP-binding protein; length FT 680 aa; id=44.6; ungapped id=45.61; E()=1.7e-94; 677 aa FT overlap; query 3-672 aa; subject 1-669 aa" FT /db_xref="GOA:Q1M4X7" FT /db_xref="InterPro:IPR010066" FT /db_xref="UniProtKB/TrEMBL:Q1M4X7" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11842.1" FT /translation="MSITPSIDREPVLDIENLRIEFRGKSETVVAIPDLSFKVMPGESY FT GLVGESGCGKSTTAMAIMGYLGATGIVAGGSIRFNGKQLVDASPKELRSVRGRQIAMVY FT QDPMSALNPVKTIGAQLAEVPLLHIGASKKDAMAMAEAMLADVRLPDPGDMMKRYPHQL FT SGGQQQRVVIAMALLAKPSLLLLDEPTTGLDVTVEAAVIDLIAELRQRYSTSLLFISHN FT LGLIAESCDRLGIMYSGQMVEEGTTSEVFRRPKHPYTRGLIDCIPDIAGDKRSRTLAAI FT PGSIPLPQERPQGCLFGPRCSSFVSGLCDRPDLALEPATEEHLVRCVRWQEISAAEATV FT APVETQMIAKSTAITLSDVNRLYPVGRQKTVKANEAVSFEAATAEIVALVGESGCGKST FT LARIVTGLDKATSGEIRMAGENIAELRAGERPRALLQQIQMIFQNPDSTLNPSHSAAFS FT IRRSIKKFGIRKGKAEIEQRVRELLEMVRLSPAVADRKPNQLSGGQKQRIAIARAFAAE FT PSLIVADEPVSALDVSVQAAVVTLLLDIQREKHATMLFISHDLALVRHVADKVVVMYLG FT KIMEQGTVEEVFGEGAHPYTEALLSAIRSPHPDEAPRERIRLSGETPSPVNVPAGCRFS FT TRCHRKLGSICDTAPPPLRKMSETHEILCHIDQADLAARPSVLVSADKA" FT misc_feature complement(127820..128398) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 196.6, E-value 5e-56" FT /inference="protein motif:Pfam:PF00005.11" FT misc_feature complement(128831..129424) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 204.9, E-value 1.6e-58" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(129580..130455) FT /transl_table=11 FT /locus_tag="pRL120129" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q7CVP3 (EMBL:AE008214); FT Agrobacterium tumefaciens; agr_l_321p; length 308 aa; FT id=40.89; ungapped id=41.46; E()=2.2e-41; 291 aa overlap; FT query 1-291 aa; subject 19-305 aa" FT /db_xref="GOA:Q1M4X6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4X6" FT /inference="similar to sequence:INSDC:AE008214" FT /protein_id="CAK11843.1" FT /translation="MAVQDNIIGAVAAPPKRAARPNWMRIFHSRTAVVGLCLVLFWVLA FT ALLAPILPLPSPTDSDVLAMSDPYPSAAHWLGTDILGRDMLSRLIFGARTVLSVAPLSV FT AVAMIVGITMGMISGYYGGWIDVLISRVSDIILAFPVLVIYVILIANIGPSVLNIVIAT FT MIASAPGIGRITRGLVLGLKQQEYVAAAKLRAESTLYIMIVELLPNCRSLLIVDACLRI FT GYTIITIGILGFLGLGLPPPNPDWGGMVKESVTVLNVWPHMSLIPSFALVSLVLGFNLL FT ADGMREAWKP" FT misc_feature complement(129583..130179) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 119.9, E-value 5.8e-33" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(129613..129681,129739..129798, FT 129910..129978,130006..130074,130093..130161, FT 130294..130362)) FT /locus_tag="pRL120129" FT /note="6 probable transmembrane helices predicted at aa FT 32-54, 99-121, 128-150,160-182, 220-239 and 259-281" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(130459..131472) FT /transl_table=11 FT /locus_tag="pRL120130" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q98K33 (EMBL:AP002998); FT Rhizobium loti; permease protein of oligopeptide ABC FT transporter; length 344 aa; id=40.34; ungapped id=43.16; FT E()=4.6e-43; 352 aa overlap; query 1-337 aa; subject 1-344 FT aa" FT /db_xref="GOA:Q1M4X5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4X5" FT /inference="similar to sequence:INSDC:AP002998" FT /protein_id="CAK11844.1" FT /translation="MATFLLKRLAMMFVTMLCASFLVFAVCEFTPGSVARKSLGPFATQ FT QQVDLLSEKLKANDPLLVRYGRWLGVLVGAIPDPLQDPTTGLNFKDPRGAQYFGNFGYS FT TLNKLPVNDVIWDRLGNTSILAGLAFLLIVPLSIIFGILSGLKEGGVLDRTLSVICITF FT TSIPEFASGVFLVTLFVILWPILPGTSPLNSDGGWAVPYQFVLPVAVLVIYDFGYVARM FT IRVSMIGVMERPYIRTAILKGMSTRRMVLGHALRNAMIAPFTVLLLQINFLISGVVVTE FT LVFAYPGFGRLILDASLFGDIATLEAATLITVAIAVVTQLLGDLGYMLLDPRIRVR" FT misc_feature complement(130465..131118) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 118.8, E-value 1.3e-32" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(130486..130554,130612..130680, FT 130819..130887,130930..130998,131035..131103, FT 131368..131436)) FT /locus_tag="pRL120130" FT /note="6 probable transmembrane helices predicted at aa FT 13-35, 124-146, 159-181,196-218, 265-287 and 307-329" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(131542..133221) FT /transl_table=11 FT /locus_tag="pRL120131" FT /product="putative substrate binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q983K9 (EMBL:AP003013); FT Rhizobium loti; mlr8282 protein; length 549 aa; id=38.44; FT ungapped id=40.41; E()=7.1e-49; 554 aa overlap; query 3-547 FT aa; subject 2-537 aa" FT /db_xref="GOA:Q1M4X4" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q1M4X4" FT /inference="similar to sequence:INSDC:AP003013" FT /protein_id="CAK11845.1" FT /translation="MTTVDKSQHSYIPTLVEQMSSGSIGRREFLRKATLLGVSAAAAYS FT LAGVPMPGDGARADDMPKGGNLRIGMRCMEIKDPHLADFAEKSNVIRQVCEYLTLTDRN FT NITHPYLLEKWEVSDDLKTWTLHVRKDVKWRKGRPLTADDVIWNLKRVCDPAIGSSMLG FT LFTGYLMQEYETGEKDEKGNPKKSSKLWADNAIEKVDDHTVRLNCSSPQIAVPEHLYHY FT PMFIIDPEENGAFGADANGTGPFVITEYVVGKGAKYKARTDYWGTGPYLDTFEYVDLGD FT NPGAGIAAMASKQVDGLSEADAVQINAMKNFPHVAVYQVETTQTVVARMHPDIDQFKDK FT RVRQAMRYAIDRDKVIQTALLGAGIPAEDHHVAPSHPEYAALPKYPRDIEKAKKLLADA FT GYPDGFEFDMVTRPDPIWELNTAQVLAEQFKDIGVKINIKSLPSAQYWEVWTTAPFSLT FT AWGHRPLAIMTLSLAYRSNAAWNESNYSNADFDKLLTEAEGILDPKERSKVMAKIEAIM FT QDDGPIVQPFWRVFSTVMDKKVKGFELHPSQYIFAHQYAISA" FT misc_feature complement(132328..132624) FT /note="Pfam match to entry PF00496.9 SBP_bac_5, score 35.9, FT E-value 1.2e-07" FT /inference="protein motif:Pfam:PF00496.9" FT CDS complement(133407..134435) FT /transl_table=11 FT /locus_tag="pRL120132" FT /product="putative AraC family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q8UEJ0 (EMBL:AE009132); FT Agrobacterium tumefaciens; transcriptional regulator, arac FT family; length 346 aa; id=38.27; ungapped id=39.24; FT E()=3.7e-46; 324 aa overlap; query 26-342 aa; subject FT 11-333 aa" FT /db_xref="GOA:Q1M4X3" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:Q1M4X3" FT /inference="similar to sequence:INSDC:AE009132" FT /protein_id="CAK11846.1" FT /translation="MFGVRPMTDQTYTLKQLAQGHRPIRIGFFLVPDFPLMTFAAALDS FT LRQGNRLAKRKAFEWLILSADGGHVKSSSGLGFDADAAIGRAPRCDIVILCAGINYADA FT YDANVFAWLRRIHSEGCVLGAVSTAVFFLAKARLLEGRRCAVHWESLASFRSEFPNCLA FT TDDIFAIDGRFLTSSGGTVTLDMMLYLISAVEGRELAALISDQFNHARIRRQDDVQRMS FT PEDRFGIRNAKLAFVVRRMEASLGDPVEISDLASSVALSLRQLERLFHANFGKSPTHFY FT IELRMTRAKELLVYTELAIGEIAEICGYQSASHFGRSYRTRFRESPAATRKAERRREVP FT VS" FT misc_feature complement(133440..133574) FT /note="Pfam match to entry PF00165.8 HTH_AraC, score 27.6, FT E-value 3.6e-05" FT /inference="protein motif:Pfam:PF00165.8" FT misc_feature complement(133590..133730) FT /note="Pfam match to entry PF00165.8 HTH_AraC, score 21.0, FT E-value 0.0035" FT /inference="protein motif:Pfam:PF00165.8" FT misc_feature complement(133851..134261) FT /note="Pfam match to entry PF01965.10 DJ-1_PfpI, score FT 31.4, E-value 2.7e-06" FT /inference="protein motif:Pfam:PF01965.10" FT CDS complement(134847..135260) FT /transl_table=11 FT /gene="stbB" FT /locus_tag="pRL120133" FT /product="putative plasmid stability protein" FT /note="similarity:fasta; SWALL:STBB_PSESM (SWALL:Q52562); FT Pseudomonas syringae; plasmid stability protein StbB; FT length 139 aa; id=59.12; ungapped id=60; E()=6.1e-28; 137 FT aa overlap; query 1-135 aa; subject 1-137 aa" FT /note="similarity:fasta; SWALL:Y4JK_RHISN (SWALL:P55511); FT Rhizobium sp.; putative plasmid stability protein FT y4jk;length 140 aa; id=69.06; ungapped id=70.07; FT E()=5.9e-34; 139 aa overlap; query 1-137 aa; subject 1-139 FT aa" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:Q1M4X2" FT /inference="similar to sequence:UniProtKB:Q52562" FT /inference="similar to sequence:UniProtKB:P55511" FT /protein_id="CAK11847.1" FT /translation="MILLDTNVISEPWKPIPDGAVVAWLDAQAIETLFVSAITIAELRF FT AIAAMPAGKRQTILRDRLEEEVLPHFAERILPFDLAASQFYSELMARARVSGKGSARGH FT IAATAVANGLAVATRDTGPFEAVGLKVINPWLP" FT misc_feature complement(134859..135257) FT /note="Pfam match to entry PF01850.8 PIN, score FT 68.6,E-value 1.7e-17" FT /inference="protein motif:Pfam:PF01850.8" FT CDS complement(135257..135520) FT /transl_table=11 FT /gene="stbC" FT /locus_tag="pRL120134" FT /product="putative plasmid stability protein" FT /note="similarity:fasta; SWALL:STBC_PSESM (SWALL:Q52561); FT Pseudomonas syringae; plasmid stability protein StbC; stbC; FT length 97 aa; id=53.65; ungapped id=54.32; E()=1.3e-11; 82 FT aa overlap; query 7-87 aa; subject 16-97 aa" FT /note="similarity:fasta; SWALL:Y4JJ_RHISN (SWALL:P55510); FT Rhizobium sp.; putative plasmid stability protein y4jj; FT length 85 aa; id=67.05; ungapped id=67.85; E()=3.8e-17; 85 FT aa overlap; query 4-87 aa; subject 1-85 aa" FT /db_xref="GOA:Q1M4X1" FT /db_xref="UniProtKB/TrEMBL:Q1M4X1" FT /inference="similar to sequence:UniProtKB:Q52561" FT /inference="similar to sequence:UniProtKB:P55510" FT /protein_id="CAK11848.1" FT /translation="MTSMPAVTIRNLSDETHRALRVRAAHHGRSTEAEIRDIIEAAVRP FT SERVKLGSLLAAIGRDAELSNSDVEALQQNRNKAPAEPMTFE" FT CDS complement(135737..136699) FT /transl_table=11 FT /locus_tag="pRL120135" FT /product="putative cyclase" FT /note="similarity:fasta; SWALL:Q93NG4 (EMBL:AF373840); FT Arthrobacter nicotinovorans; hypothetical polyketide FT cyclase; length 310 aa; id=53.51; ungapped id=53.69; FT E()=1.6e-59; 299 aa overlap; query 22-319 aa; subject 8-306 FT aa" FT /db_xref="InterPro:IPR007325" FT /db_xref="UniProtKB/TrEMBL:Q1M4X0" FT /inference="similar to sequence:INSDC:AF373840" FT /protein_id="CAK11849.1" FT /translation="MACYVDEATKSKIIAYNAEFHKVTKSPYGSDDEIGMLNLIDAKSR FT SAIIGRTDASKVFDLSVDHFVGMPGWFGAGDQPYQIWMTHTPQGEIVANTMGVTRQQNE FT LVAYSGDSISMYTHCGTHIDTFNHFGYNGEIFNGFTARDHLGSRAWDICGPEKYPPIFA FT RGILLDIAAMHGVDTLPPSHPIGKADIEDCLKKQGLKILPGDVVLLRTGQMLRWPDIAF FT TKNTPGLNREGAEYIAKHGAVMIGADNLTLEQTPSAHELNFFPVHTYLLAEAGVPILEM FT AYLEELAGDKLYEFAFFGACIKLRGATGAPMRPVAMPLN" FT misc_feature complement(135788..136531) FT /note="Pfam match to entry PF04199.2 Cyclase, score 10.8, FT E-value 6.5e-06" FT /inference="protein motif:Pfam:PF04199.2" FT CDS complement(136751..138124) FT /transl_table=11 FT /locus_tag="pRL120136" FT /product="glutamyl-tRNA(Gln) amidotransferase subunit" FT /note="similarity:fasta; SWALL:GATA_BACSU (SWALL:O06491); FT Bacillus subtilis; glutamyl-trna(gln) amidotransferase FT subunit; gatA; length 485 aa; id=29.82; ungapped id=32.53; FT E()=6.5e-20; 456 aa overlap; query 10-433 aa; subject 8-457 FT aa" FT /note="similarity:fasta; SWALL:Q92SY9 (EMBL:AL591782); FT Rhizobium meliloti; putative amidase protein; length 453 FT aa; id=62.05; ungapped id=62.33; E()=4.6e-101; 448 aa FT overlap; query 9-455 aa; subject 6-452 aa" FT /db_xref="GOA:Q1M4W9" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q1M4W9" FT /inference="similar to sequence:UniProtKB:O06491" FT /inference="similar to sequence:INSDC:AL591782" FT /protein_id="CAK11850.1" FT /translation="MTLSYGSLSIAQLSTLIQGGSVDPVTVAEQVLDAIESHDDKAVFI FT SLTRERAMAEAHASSKRLNDGRSLGLLEGIPVAWKDLFDVAGSVTAAGSRLLLRDQAPA FT AVDAAVVSALASAGMVATGRVNMSEFAFSGLGINPHFGTPKNPRSTDVARIPGGSSSGS FT GVAVASALVPVSIGSDTGGSVRIPAALNGIVGYKATRGRYPMTGVFPLSGSLDSLGPLC FT RSVQDAIWIDAAMRGAMAPTASRRPLAGLEVVIPTNVVFDDAEPGVVAAFEAAVERLSA FT AGVMFTRLEIPAFAEILQLMASHGALVTAEAYWLHKARITGPDAGLIDPRVVSRTRFGE FT EITLPHYLDILSARKRLIEAVDRLVGDRLIAFPTVAHVAPLLEPLKTDDQLFVATNGKT FT LRNTLLGNFLDWCGVSIPCGAGDAGMPVGFLLSGLARGDERLLSVALVAEPVIRGETI" FT misc_feature complement(136799..138049) FT /note="Pfam match to entry PF01425.8 Amidase, score 257.3, FT E-value 2.6e-74" FT /inference="protein motif:Pfam:PF01425.8" FT CDS complement(138144..139352) FT /transl_table=11 FT /locus_tag="pRL120137" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q87XI1 (EMBL:AE016871); FT Pseudomonas syringae; hypothetical protein; length 398 aa; FT id=52.97; ungapped id=53.38; E()=4e-83; 387 aa overlap; FT query 19-402 aa; subject 3-389 aa" FT /db_xref="UniProtKB/TrEMBL:Q1M4W8" FT /inference="similar to sequence:INSDC:AE016871" FT /protein_id="CAK11851.1" FT /translation="MRKMPKSFPTPALHTEGRIKLRILGTAISLLEELRLGAERDLGMD FT IEFDNQDFMTAQHKAALEPMTYDIYDQCFHNLDIVWYWRAVQPIDIERITLWDEITDLT FT KTGRIGPNARIGQGDAPVTKLFVQPNLALAETPSQRISMLPTTHNFDSFAYRTDAANSN FT QMTSWAALLDPRWHGRAALVNEPAIGIFDAALAAQSAGLMTFNNLGNMSVEEIDRLLCI FT LEERKKAGFFRGFWRSAEDAANLMTKSDTQIQSMWSLGISKLNLRGFPVELANPAEGYR FT AWHGGLCLSKRLSGRLLDAAYDYLNWWISGWPGAVVARQGYYMSTPTRSRPHMTPAEWD FT YWYEGLPAATDLPGPDGLLRVKTGAVRSGGSYWQRANSIAVWNTTMDEHNYLVRRWMQF FT VAA" FT CDS complement(139349..140389) FT /transl_table=11 FT /locus_tag="pRL120138" FT /product="putative cobW family cobalimin synthesis protein" FT /note="similarity:fasta; SWALL:Q87XI0 (EMBL:AE016871); FT Pseudomonas syringae; cobalamin synthesis protein/p47k FT family protein; length 335 aa; id=43.34; ungapped id=44.44; FT E()=2.2e-48; 323 aa overlap; query 11-329 aa; subject 5-323 FT aa" FT /note="This CDS overlaps 5 nt at the N-terminus with FT pRL120139" FT /db_xref="InterPro:IPR011629" FT /db_xref="UniProtKB/TrEMBL:Q1M4W7" FT /inference="similar to sequence:INSDC:AE016871" FT /protein_id="CAK11852.1" FT /translation="MADAFPAFTPVTLLTGFLGSGKTTLLRRLLTDPALSNAAVLINEF FT GEAGLDHHLLERIDENMVLLQSGCLCCTVRGELADAIRDLHSKRERGIVPPFDRIVIES FT TGLADPFPVLSTLKADPVLRHHFRSSGVIATVDTVNAGRQLAAYREPMRQVAVADLLVL FT TKADIAEAGQVARVTAMIRQINPDAPIVLGSDDVVSLMEDMTTGRAEAMQSPGGFYCDD FT PGPVLASEHSGGIRSFVLVSEGTVDWTAFGIWLTMLLNRHGDRILRVKGILNIEGEDFP FT VAIHGVQHLVHTPVHMQSWPGGDRCSRIVFIVDGIAPEVIKRSFDAFNGLGVAKVAPKR FT VEELQP" FT misc_feature complement(139403..139687) FT /note="Pfam match to entry PF07683.1 CobW_C, score FT 92.6,E-value 1e-24" FT /inference="protein motif:Pfam:PF07683.1" FT misc_feature complement(139814..140362) FT /note="Pfam match to entry PF02492.7 cobW, score FT 180.8,E-value 2.7e-51" FT /inference="protein motif:Pfam:PF02492.7" FT CDS complement(140382..140714) FT /transl_table=11 FT /locus_tag="pRL120139" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q87XH9 (EMBL:AE016871); FT Pseudomonas syringae; hypothetical protein; length 99 aa; FT id=44.76; ungapped id=48.95; E()=2.7e-08; 105 aa overlap; FT query 1-105 aa; subject 1-96 aa" FT /note="This CDS overlaps 5 nt at the C-terminus with FT pRL120138" FT /db_xref="UniProtKB/TrEMBL:Q1M4W6" FT /inference="similar to sequence:INSDC:AE016871" FT /protein_id="CAK11853.1" FT /translation="MCSLCGILGGNEHWADAVARPGVYTRSAERIDRRRERARRVAIAN FT RILDAFGLGISDWQGSSFLLSTRTGKTEIIEDLGHLWPAAERLAGRPLDPLAEPLLDRL FT EANRHG" FT CDS complement(140727..141608) FT /transl_table=11 FT /locus_tag="pRL120140" FT /product="putative imidase" FT /note="similarity:fasta; SWALL:Q93T25 (EMBL:AF373287); FT Alcaligenes eutrophus; imidase; length 291 aa; id=76.97; FT ungapped id=76.97; E()=3.3e-96; 291 aa overlap; query 1-291 FT aa; subject 1-291 aa" FT /note="similarity:fasta; SWALL:Q87XH5 (EMBL:AE016871); FT Pseudomonas syringae; polysaccharide deacetylase family FT protein; length 293 aa; id=79.86; ungapped id=79.86; FT E()=3.4e-101; 293 aa overlap; query 1-293 aa; subject 1-293 FT aa" FT /db_xref="GOA:Q1M4W5" FT /db_xref="InterPro:IPR002509" FT /db_xref="UniProtKB/TrEMBL:Q1M4W5" FT /inference="similar to sequence:INSDC:AF373287" FT /inference="similar to sequence:INSDC:AE016871" FT /protein_id="CAK11854.1" FT /translation="MAKEIFCSFGIDVDAVAGWLGSYGGEDSPDDISRGLFSGEVGSPR FT LLKLFERFGIKTTWFIPGHSIETFPEQMQAVAAAGHEIGIHGYTHENPIAMTREQETEV FT LDKCIELVAKLSGKRPTGYVAPWWEFSNVTNELLLERGIKYDHSLMHNDFTPYYVRVGD FT SWTKIDYSKKPSDWMVPLKRGHETDLIEIPASWYLDDLPPMMFIKKAPNSHGFVNPHDI FT EQMWRDQFDWVYREMDYAVFPITIHPDVAGRPQVLMMLERLYAHMIKHPGVKFVTMNEI FT ADDFAKRFPRKK" FT misc_feature complement(141171..141533) FT /note="Pfam match to entry PF01522.9 Polysacc_deac_1, score FT 104.2, E-value 3.3e-28" FT /inference="protein motif:Pfam:PF01522.9" FT CDS complement(141662..142780) FT /transl_table=11 FT /locus_tag="pRL120141" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q92WQ8 (EMBL:AL591985); FT Rhizobium meliloti; probable spermidineputrescine ABC FT transporter ATP-binding protein; length 356 aa; id=42.52; FT ungapped id=44.34; E()=5.9e-44; 341 aa overlap; query 1-340 FT aa; subject 1-328 aa" FT /db_xref="GOA:Q1M4W4" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M4W4" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11855.1" FT /translation="MTDMIHDLELYQIGKVYDNGTPAVIDFNLTVDKGEFIAFLGPSGC FT GKTTTLRMIAGFESISSGNLMVRGERINDIGPAQRPTSMIFQNYALFPHMTVRNNIGYG FT LDVKRMEKAQRNAKVDRILEKLGLEDVADKRCDKLSGGQRQRIALARGLVVEPDILLLD FT EPLGALDANLRKTIQSELKLLQRELGVTFVFVTHAQSEALALSDRIVVMNQGRIEQISP FT PHQLYTRPNTPFVAQFIGRNTIFKGAVKGHEKGHVMVDTPLGLLAGDANGAVADGDAVS FT VVIPAEAVEVHALDKGGRDAIAEASSGNIIDARIHRFDVVGHISHLSVALPDGRMLALE FT AHVDKYPPGAFPVDAPVALAFKPENATVIPAH" FT misc_feature complement(142136..142681) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 235.4, E-value 1e-67" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(142879..144114) FT /transl_table=11 FT /locus_tag="pRL120142" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q89IR0 (EMBL:AP005955); FT Bradyrhizobium japonicum; ABC transporter substrate-binding FT protein; length 437 aa; id=32.63; ungapped id=35.35; FT E()=5.2e-34; 429 aa overlap; query 7-411 aa; subject 18-437 FT aa" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q1M4W3" FT /inference="similar to sequence:INSDC:AP005955" FT /protein_id="CAK11856.1" FT /translation="MTISMDMNRRSLLKRSAGAMALAIGGGTHFLSSRAAYAQAASLAG FT EQLRTIGLSVTVQERILADFKAASGVGTTSGTAATFPDAQTRILSGSKDYDVWETIGER FT LPSVVMTDNADPIETAGLKSWSNIREIFTKPDPKFDPKAQIVGQIWTDETQTALWMVPS FT VFNFDSVGYNPEVLSDEEANSWTAIFDSKYKGKSGLNTDPLTAFGQAVMAMNTLGLSNV FT KNPGNPTAAQIDEAAKFLISKKKEGQFRALWGDFGELVNFLASGEIVVCDAWQPAVMAV FT KAQGKPCKYAIPKEGYRAWSIGNTMLKGTPNKEAVVAYADYWLSGEPGITVSEQGYYSP FT TTNIKEKMAPEKYAFWYEGKPWVGAAERGIKEGDLRDGGSLETRAANVAYWHQWPDEYD FT HLIQKWDEFLSA" FT sig_peptide complement(144001..144114) FT /locus_tag="pRL120142" FT /note="Signal peptide predicted for pRL120142 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.578 between residues 38 and 39" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(144218..144991) FT /transl_table=11 FT /locus_tag="pRL120143" FT /product="putative short-chain dehydrogenase/reductase" FT /note="similarity:fasta; SWALL:UCPA_ECO57 (SWALL:Q8XBJ4); FT Escherichia coli O157:H7; oxidoreductase; ucpA; length 263 FT aa; id=37.45; ungapped id=38.84; E()=8.5e-23; 251 aa FT overlap; query 7-251 aa; subject 5-252 aa" FT /note="similarity:fasta; SWALL:Q87XH7 (EMBL:AE016871); FT Pseudomonas syringae; oxidoreductase, short chain FT dehydrogenase/reductase family; length 253 aa; id=48.2; FT ungapped id=49.38; E()=1.7e-33; 251 aa overlap; query 7-254 FT aa; subject 2-249 aa" FT /db_xref="GOA:Q1M4W2" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4W2" FT /inference="similar to sequence:UniProtKB:Q8XBJ4" FT /inference="similar to sequence:INSDC:AE016871" FT /protein_id="CAK11857.1" FT /translation="MTTISSTPRIVLITGAGIGIGKATAKAFAALGDHVIVTDVLKVEG FT RAAVAEIEDAGGSAEFIELDVRSTSAVDALVADVEKRYGRLDVIIANAGIAHKAPLDVL FT DDDRWELTFDIDLKGIFRVVRAAVPGMRARKSGAVVALSSIMGVAYGWDEHVHYSAAKA FT GVVGLVRGLAVELARDGIRVNGMAPGYIRTAQLLSEENSLGPKGAEAASAFIPMGRLGE FT PEDIADVIVFLASNSARYMTGQTLVVDGGLLVGRY" FT misc_feature complement(144236..144961) FT /note="Pfam match to entry PF00106.11 adh_short, score FT 283.0, E-value 4.7e-82" FT /inference="protein motif:Pfam:PF00106.11" FT CDS complement(145005..145745) FT /transl_table=11 FT /locus_tag="pRL120144" FT /product="putative 3-oxoacyl-[acyl-carrier-protein] FT reductase (3-ketoacyl-acyl carrier protein reductase)" FT /note="similarity:fasta; SWALL:FABG_BACSU (SWALL:P51831); FT Bacillus subtilis; 3-oxoacyl-[acyl-carrier-protein] FT reductase (3-ketoacyl- acyl carrier protein reductase); FT fabG; length 246 aa; id=40.24; ungapped id=40.4; FT E()=1.9e-24; 246 aa overlap; query 1-245 aa; subject 1-246 FT aa" FT /note="similarity:fasta; SWALL:Q84I76 (EMBL:AF373287); FT Alcaligenes eutrophus; putative short-chain dehydrogenase; FT length 252 aa; id=50.83; ungapped id=51.04; E()=2.8e-34; FT 240 aa overlap; query 7-245 aa; subject 12-251 aa" FT /db_xref="GOA:Q1M4W1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4W1" FT /inference="similar to sequence:UniProtKB:P51831" FT /inference="similar to sequence:INSDC:AF373287" FT /protein_id="CAK11858.1" FT /translation="MMPIPSAIVTGAGSGIGRAIAARLSQDGYAVLVNDLHLDRAQAVA FT DEIAVAGGKAVAVAGDVSSETDTANVYDVAVSAFGHPRLLVNCAGIVHQALFENLEVAD FT FDRMFAIHVRGTFLMTKLALPSMLAAGDGVIINVASQLGQIGGIELVHYAGAKAAIIGM FT TKSLAREVSNRGVRVNAVAPGPINTPLVRELSQEWRVRKAAELPLGRFGEPEEVAATVS FT FLASPAASLFVGQTLGPNSGDVML" FT misc_feature complement(145017..145727) FT /note="Pfam match to entry PF00106.11 adh_short, score FT 263.8, E-value 3e-76" FT /inference="protein motif:Pfam:PF00106.11" FT sig_peptide complement(145683..145745) FT /locus_tag="pRL120144" FT /note="Signal peptide predicted for pRL120144 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.727) with cleavage FT site probability 0.690 between residues 21 and 22" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(145742..146587) FT /transl_table=11 FT /locus_tag="pRL120145" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q982Y3 (EMBL:AP003014); FT Rhizobium loti; ABC transporter, permease protein; length FT 272 aa; id=39.62; ungapped id=40.69; E()=2.1e-35; 265 aa FT overlap; query 10-273 aa; subject 13-271 aa" FT /db_xref="GOA:Q1M4W0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4W0" FT /inference="similar to sequence:INSDC:AP003014" FT /protein_id="CAK11859.1" FT /translation="MQAGGIKLSLGVYTALFLIFLYAPMVVLAILSFQTGPEGGPQFPI FT IEWSTYWYKHLFGLTPPSRIAPLPINEALVRSLVLSVMTMIVSTVLGVTSAQAFRRRFP FT GSGVVFYLIVLGMMVPGVLVGLGMALVANALGVDRHWWGTAFVLHVVYTYPFAFLVMLA FT ILNRFDQSVEEASWSLGVSPARTFRKVTFPLIFPGVLSAMLFAFTLSYDEFSRTLFASG FT RDLTLPLAIYGTFSVEVHPNVFAFGVLTTIFSFALLGVYAVLMMLSIRRAKRVAIQEEA FT " FT misc_feature complement(145763..146368) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 39.5, E-value 9.7e-09" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(145793..145861,145961..146020, FT 146102..146170,146198..146266,146303..146371, FT 146495..146563)) FT /locus_tag="pRL120145" FT /note="6 probable transmembrane helices predicted at aa FT 9-31, 73-95, 108-130, 140-162,190-209 and 243-265" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(146589..147488) FT /transl_table=11 FT /locus_tag="pRL120146" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q89IQ9 (EMBL:AP005955); FT Bradyrhizobium japonicum; ABC transporter permease protein; FT length 319 aa; id=36.3; ungapped id=38.46; E()=1.6e-33; 303 FT aa overlap; query 10-299 aa; subject 21-319 aa" FT /db_xref="GOA:Q1M4V9" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4V9" FT /inference="similar to sequence:INSDC:AP005955" FT /protein_id="CAK11860.1" FT /translation="MSISATTAETETTVEPVRKASGKTLWLLAPGVIWMLLFLVTPILM FT MIYVSFWTQTTFKITPDLTIKSWITFFTTDTYLSALWTTVRIWLIVLVSTLVVGYPAAL FT YVGLFVKNKTIQTALLVLCVIPFWTSFLIRVLAWRPMLGKEGAINLILQGLGIINQPIE FT VLLFSELSVIIGMTQIYCVFMVGPIAFMMGRIDQSVIEAAQDLGAGFWRIFRTIILPLT FT MPGVVVGAIFVSVMVLGEFATAAALSGRKVNLLGNIIVTQVGSLKWAFAAVVGVVLTVL FT MGIVVAALLRVVDLRKEL" FT misc_feature complement(146592..147248) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 52.7, E-value 1.1e-12" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(146619..146687,146775..146843, FT 146904..146972,147075..147143,147162..147230, FT 147348..147416)) FT /locus_tag="pRL120146" FT /note="6 probable transmembrane helices predicted at aa FT 25-47, 87-109, 116-138,173-195, 216-238 and 268-290" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(147527..148615) FT /transl_table=11 FT /locus_tag="pRL120147" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q72JA3 (EMBL:AE017304); FT Thermus thermophilus; spermidine/putrescine transport FT ATP-binding protein PotA; potA; length 367 aa; id=43.06; FT ungapped id=45.28; E()=1.8e-39; 346 aa overlap; query 8-349 FT aa; subject 17-349 aa" FT /db_xref="GOA:Q1M4V8" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M4V8" FT /inference="similar to sequence:INSDC:AE017304" FT /protein_id="CAK11861.1" FT /translation="MERLLSSVLKLAGVTKAYGTLNALDGIDLSLPNDSYVSLLGPSGS FT GKTTLLRVIAGFEQPDLGTVVFKGQRIETVPPHRRDIGFVFQNFALFPHLSVSRNIAFG FT LENRVENPVTDPAIVQARVKDMIALVGLSGLEDRGVAQISGGQRQRVALARTLVTEPSL FT VLLDEPLGALDANLRARMRSELRLIRERCGVTFLHVTGSESEALAMGDMVLVLDSGRIA FT QAADADTIYNRPKSLAVAGFLNCYNLFEGRLAGESFLGPYGAFPLGDQMQFRDDRTGYA FT IRYDRVAIRPAEAPVADDEVKLEATFVADEYSGAAINSFFSLDDGRVFEVESHLSQSMP FT PACAPQSRYALVWKRRDALVYA" FT misc_feature complement(147959..148516) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 174.7, E-value 1.9e-49" FT /inference="protein motif:Pfam:PF00005.11" FT CDS 148803..149093 FT /transl_table=11 FT /locus_tag="pRL120148" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q1M4V7" FT /protein_id="CAK11862.1" FT /translation="METVEILCMATRSHKMIASIDGKTRKGEMKAPAHYAHFFGEYSAK FT LAYFCIKCAFHAQLSAPPDPFDGETAQRDKKVQPAPLLAENAISVCKRHLF" FT CDS 149163..150182 FT /transl_table=11 FT /locus_tag="pRL120149" FT /product="putative GntR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q87XH3 (EMBL:AE016871); FT Pseudomonas syringae; transcriptional regulator, gntr FT family; length 333 aa; id=38.27; ungapped id=39.11; FT E()=6.6e-37; 324 aa overlap; query 17-338 aa; subject FT 14-332 aa" FT /db_xref="GOA:Q1M4V6" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M4V6" FT /inference="similar to sequence:INSDC:AE016871" FT /protein_id="CAK11863.1" FT /translation="MPRPMIRNLPAQTAQRRYEIAEHILRDNIVGGQLPLGLVLLEGPI FT ADILQTSRAPVQRALLRLEADGLVHRFQGRGFLVGPQDAGLTPNRTDIKSFGLVIAQHA FT DEALQSRSSWARIYNTVERDVAGCVVFGQYRIIEIELANHFKVSRTVVRDVLSRLQERG FT LVRKNQSSHWIAGPLTAQTIKDHFTLRRMLEPAALKAGAAAVDRERLTELFTRLAGLEA FT SQPVDHLEKLEELQEQMIDICVLTTANEKTRELIRNNLLPVNAAERLLRHLGLPDDPTA FT ITEMRLIVELLMRGAVDAAAAMLETHLDASMKRMIAQMKIVAIIPGPSVTADYLTHVE" FT misc_feature 149211..149399 FT /note="Pfam match to entry PF00392.9 GntR, score FT 57.5,E-value 3.7e-14" FT /inference="protein motif:Pfam:PF00392.9" FT CDS complement(150205..151176) FT /transl_table=11 FT /locus_tag="pRL120150" FT /product="putative urea amidolyase related protein" FT /note="similarity:fasta; SWALL:Q75RY4 (EMBL:AB158433); FT Oleomonas sagaranensis; urea carboxylase homologue; length FT 1171 aa; id=38.72; ungapped id=39.51; E()=1.6e-25; 297 aa FT overlap; query 3-297 aa; subject 449-741 aa" FT /note="similarity:fasta; SWALL:Q881F9 (EMBL:AE016866); FT Pseudomonas syringae; urea amidolyase-related protein; FT length 324 aa; id=64.39; ungapped id=65.2; E()=6.6e-71; 323 FT aa overlap; query 3-321 aa; subject 2-324 aa" FT /db_xref="GOA:Q1M4V5" FT /db_xref="InterPro:IPR003778" FT /db_xref="UniProtKB/TrEMBL:Q1M4V5" FT /inference="similar to sequence:INSDC:AB158433" FT /inference="similar to sequence:INSDC:AE016866" FT /protein_id="CAK11864.1" FT /translation="MAIKVLHPGLSTSVQDLGRPGYFHLGIPIGGAMDRYAMRAANLLV FT GNDEGAAGLEAVFMGPKLEFAEDALVAVTGADMPAKVDGVGQPGWTAFKVKAGQVLSFD FT FLKSGARILIAVAGGIDVPEALGSRSTYPIGALGGYKGRALAAGDALPVGKAGLAEEGK FT SVAEELRRRPGTPAELRVLPGLYWDRLTDAAKASFFADEWKVAPEADRMGYRFRGGRKL FT DFLDRKQPFGAGSDPSNIVDSCYPYGSIQVPGGTEPIILHRDAVSGGGYFMVGTVISAD FT MDLIGQLQPHTPARFVEVTMDEALKARADRAALLDRLRQSLS" FT misc_feature complement(150235..151107) FT /note="Pfam match to entry PF02626.5 AHS2, score FT 251.6,E-value 1.4e-72" FT /inference="protein motif:Pfam:PF02626.5" FT CDS complement(151166..152041) FT /transl_table=11 FT /locus_tag="pRL120151" FT /product="putative urea amidohydrolyase homologue" FT /note="similarity:fasta; SWALL:Q75RY4 (EMBL:AB158433); FT Oleomonas sagaranensis; urea carboxylase homologue; length FT 1171 aa; id=28.09; ungapped id=30.43; E()=1.4e-14; 299 aa FT overlap; query 1-285 aa; subject 769-1058 aa" FT /note="similarity:fasta; SWALL:Q88IS8 (EMBL:AE016784); FT Pseudomonas putida; hypothetical protein; length 313 aa; FT id=66.09; ungapped id=67.25; E()=6e-76; 289 aa overlap; FT query 2-288 aa; subject 27-312 aa" FT /db_xref="GOA:Q1M4V4" FT /db_xref="InterPro:IPR003833" FT /db_xref="UniProtKB/TrEMBL:Q1M4V4" FT /inference="similar to sequence:INSDC:AB158433" FT /inference="similar to sequence:INSDC:AE016784" FT /protein_id="CAK11865.1" FT /translation="MPARYTFGGDEHLFVECSSEMSLEAFFKSLSMATAVRESRIRGVT FT EICPANASFQVKFNPDLIKPDDILREVQAIEGVAEKSEPVLKTRIIEIPVFYNDPWTYE FT TLMRFRERHQEPGGTDLDYAARINGYGGVEDFVAAHAGSPWFVSMVGFVAGLPFMYQMV FT ERQRQIEVPKYLRPRTDTPKLTVGHGGCFGCIYSVRGAGGYQMFGVTPMPIFDPTQQTS FT YLRDFMVFFRPGDIVKFKPVDRDGYDTAVEEVDKKLFSPPIREVRFDLREFSKDIHGYN FT AALEGVLHGH" FT misc_feature complement(151367..152035) FT /note="Pfam match to entry PF02682.5 AHS1, score FT 0.7,E-value 6.2e-08" FT /inference="protein motif:Pfam:PF02682.5" FT CDS complement(152041..153426) FT /transl_table=11 FT /locus_tag="pRL120152" FT /product="putative biotin carboxylase" FT /note="similarity:fasta; SWALL:ACCC_PSEAE (SWALL:P37798); FT Pseudomonas aeruginosa; biotin carboxylase; accC; length FT 449 aa; id=52.11; ungapped id=52.7; E()=1.6e-79; 449 aa FT overlap; query 3-449 aa; subject 2-447 aa" FT /note="similarity:fasta; SWALL:Q7VZL2 (EMBL:BX640413); FT Bordetella pertussis; biotin carboxylase; accC; length 456 FT aa; id=55.21; ungapped id=55.21; E()=3.4e-86; 451 aa FT overlap; query 1-451 aa; subject 1-451 aa" FT /db_xref="GOA:Q1M4V3" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/TrEMBL:Q1M4V3" FT /inference="similar to sequence:UniProtKB:P37798" FT /inference="similar to sequence:INSDC:BX640413" FT /protein_id="CAK11866.1" FT /translation="MTIRSVLVANRGEIAVRVIKAAKALGIRTVQVHSAADADMLAVRL FT ADEAVNIGPPAPKKSYLDIEAVIAAAKAAGVDAVHPGYGFLSENGDFADAVRDAGMIFI FT GPSGDAIRTLGDKVAARQVAKRAGVPTVPGSDGRVAGLEEARLLAGEIGFPVMIKAAAG FT GGGRGIRIVDSIAELEQQFPLASAEALAAFGDGGLYLEKVIARARHVEVQIFGDGQNFV FT HFFERECSLQRRRQKVWEEAPAFMLPADMRERLCVSAVALAREVGYRGAGTVEYLYDDE FT TGDFYFIEVNTRIQVEHPVTEMITGFDLVQEMFKVAGGAALSVAQRDIVASGHAIECRI FT NAEDPFKAFQPSPGTIASLSVPEGEGIRFDTMLYEGYTIPPFYDSLLGKLIVHAETRKA FT CLEKLAASLTALAIEGVPTTVALHLALARDASVAKGAFHTRFLEQWLEHDFPALAGRTQ FT EVA" FT misc_feature complement(152098..152418) FT /note="Pfam match to entry PF02785.5 Biotin_carb_C, score FT 168.7, E-value 1.2e-47" FT /inference="protein motif:Pfam:PF02785.5" FT misc_feature complement(152437..153081) FT /note="Pfam match to entry PF02786.4 CPSase_L_D2, score FT 338.1, E-value 1.3e-98" FT /inference="protein motif:Pfam:PF02786.4" FT misc_feature complement(153085..153423) FT /note="Pfam match to entry PF00289.9 CPSase_L_chain, score FT 150.5, E-value 3.7e-42" FT /inference="protein motif:Pfam:PF00289.9" FT CDS complement(153426..153680) FT /pseudo FT /transl_table=11 FT /locus_tag="pRL120153" FT /note="Similar to codons 105 to the C-terminus of Anabaena FT sp. biotin carboxyl carrier protein of acetyl-CoA FT carboxylase AccB SWALL:BCCP_ANASP (SWALL:Q06881) (181 aa), FT and to Pseudomonas aeruginosa probable biotin-requiring FT enzyme SWALL:Q9I625 (EMBL:AE004486) (82 aa)" FT /note="similarity:fasta; SWALL:BCCP_ANASP (SWALL:Q06881); FT Anabaena sp.; biotin carboxyl carrier protein of acetyl-coa FT carboxylase; accB; length 181 aa; id=42.66; ungapped FT id=42.66; E()=1.6e-06; 75 aa overlap; query 10-84 aa; FT subject 105-179 aa" FT /note="similarity:fasta; SWALL:Q9I625 (EMBL:AE004486); FT Pseudomonas aeruginosa; probable biotin-requiring enzyme; FT length 82 aa; id=47.43; ungapped id=47.43; E()=2.5e-09; 78 FT aa overlap; query 6-83 aa; subject 1-78 aa" FT /note="putative biotin carboxyl carrier protein,pseudogene" FT /inference="similar to sequence:UniProtKB:Q06881" FT /inference="similar to sequence:INSDC:AE004486" FT misc_feature complement(153432..153656) FT /note="Pfam match to entry PF00364.9 Biotin_lipoyl, score FT 58.0, E-value 2.6e-14" FT /inference="protein motif:Pfam:PF00364.9" FT CDS complement(153684..154460) FT /transl_table=11 FT /locus_tag="pRL120154" FT /product="putative LamB/YcsF family protein" FT /note="similarity:fasta; SWALL:Y492_PSEAE (SWALL:Q9I626); FT Pseudomonas aeruginosa; hypothetical upf0271 protein FT pa0492; length 252 aa; id=61.22; ungapped id=61.22; FT E()=4.7e-56; 245 aa overlap; query 5-249 aa; subject 4-248 FT aa" FT /db_xref="InterPro:IPR005501" FT /db_xref="UniProtKB/TrEMBL:Q1M4V2" FT /inference="similar to sequence:UniProtKB:Q9I626" FT /protein_id="CAK11868.1" FT /translation="MKDIVDINCDMGEAFGRWRIGDTQDSLLISHISSANIATGFHAGD FT PNLIDETVALAAAHGVGIGAHPGYNDLQGFGRRKIVGSSKELVNDIIYQVGALREFARR FT YSVPVQHVKPHGALYMEMAVNPDFAQLFVQYMRIVSPNAFVFCMGGSATHKAALDAGQP FT VVREFYADRDYDDSGSIVFTRDAGRPDPMVLAQKVLRACQEGKVRTVTGNDIDIEFESI FT CFHSDTLGALDIVLSMRELLIGAGIRIVPVSQILGH" FT misc_feature complement(153726..154451) FT /note="Pfam match to entry PF03746.4 LamB_YcsF, score FT 358.3, E-value 1e-104" FT /inference="protein motif:Pfam:PF03746.4" FT CDS 154712..155620 FT /transl_table=11 FT /locus_tag="pRL120155" FT /product="putative LysR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q9I627 (EMBL:AE004486); FT Pseudomonas aeruginosa; probable transcriptional regulator; FT length 308 aa; id=58.38; ungapped id=58.38; E()=1.5e-65; FT 298 aa overlap; query 1-298 aa; subject 4-301 aa" FT /db_xref="GOA:Q1M4V1" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M4V1" FT /inference="similar to sequence:INSDC:AE004486" FT /protein_id="CAK11869.1" FT /translation="MSLSFRQLRYFVATAEQGQISYAAAQLSISQSAVTTAIKELEKSI FT GVALFTRMPQGMELTAAGRQFLSYAYEILAKVDEATHLNYVSSDIEGDLTVAATYTVIG FT YFLPLHIERMRRLYPKLRIQLYEVNRESIEEGLLVNRYDISVLLTSNILNTALTTETLL FT RSIRRLWVAAQHPLLKHVGVGLQEIAEEPYIMLTVDEAAYSSLKYWSTTPYQPRVMLRT FT SSIEAVRSMVANNLGVAILSDMVHRPWSLEGRRIETINIKDPVPPMDVGLAWRANTDFT FT PAMHAFRRYFQQAFGLPGTNA" FT misc_feature 154724..154903 FT /note="Pfam match to entry PF00126.10 HTH_1, score FT 74.1,E-value 3.7e-19" FT /inference="protein motif:Pfam:PF00126.10" FT misc_feature 154763..154828 FT /note="Predicted helix-turn-helix motif with score FT 1182.000, SD 3.21 at aa 59-80, sequence FT GQISYAAAQLSISQSAVTTAIK" FT misc_feature 154970..155599 FT /note="Pfam match to entry PF03466.5 LysR_substrate, score FT 145.0, E-value 1.6e-40" FT /inference="protein motif:Pfam:PF03466.5" FT CDS complement(155971..156909) FT /transl_table=11 FT /locus_tag="pRL120157" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q9KWB6 (EMBL:AB039932); FT Agrobacterium rhizogenes; Riorf68 protein; length 339 aa; FT id=54.8; ungapped id=54.8; E()=7.1e-69; 312 aa overlap; FT query 1-312 aa; subject 28-339 aa" FT /db_xref="InterPro:IPR002573" FT /db_xref="UniProtKB/TrEMBL:Q1M4V0" FT /inference="similar to sequence:INSDC:AB039932" FT /protein_id="CAK11870.1" FT /translation="MEKRLGEAANEAEAEIESLLREIEPWSGRELHYGPVHGGISNSNW FT RVRVAGEQGRFFVKVPGRGTEMFIDRNAALDASRRAQDLGIGPRIYEYLADRGVEIADY FT IEGHRACTNRDFQDPTVRKAVVGLYRTFNDSGRLPLTKTIFDMIDEHIEQVRELNGAFP FT IDFAWLYKQYRLARAALEASGIDLVACFNDPMAGNFMVAEDKSLMLIDYEYASNNDRCY FT DIGIWCGEMFFSDAVEAEVIEEYFGRFDPRMKARLAVHRALADVKWSTWAMVQNVVSAL FT DFDFYKYGAWKHMRARAAMQDPRWVEYLKAV" FT misc_feature complement(156034..156756) FT /note="Pfam match to entry PF01633.7 Choline_kinase, score FT -81.6, E-value 1.1e-05" FT /inference="protein motif:Pfam:PF01633.7" FT CDS complement(156921..157889) FT /transl_table=11 FT /locus_tag="pRL120158" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q9KWB7 (EMBL:AB039932); FT Agrobacterium rhizogenes; Riorf67 protein; length 309 aa; FT id=41.93; ungapped id=42.62; E()=9.4e-42; 310 aa overlap; FT query 11-320 aa; subject 3-307 aa" FT /db_xref="InterPro:IPR002575" FT /db_xref="UniProtKB/TrEMBL:Q1M4U9" FT /inference="similar to sequence:INSDC:AB039932" FT /protein_id="CAK11871.1" FT /translation="MKALGQASTVDEKAAEAAIRAVPGWANADMRYALGIAGVASPTHR FT AVDSQNWFVARGDAPATYFLKILHTDQSDFIDLDRSVSAARQASTLGLTPAPLWHSPEM FT SAVVFDRLPEAWHTARMDDLRKRNVLESVIAAKSTLHGGTPLGETWTVFDRIRVVEKAL FT VDAAVVEVAADGWWMRECVGDIEAAIIATGFDEKPAHADGLASNIMIAPDGRVQLVDFD FT EARNVDPFYDIGILLNEAFQFDSEMQPALEIFEGQFRQTSLNRCRLYAIADDLFWGMWG FT MLMDRVSPRGGIEFLKYAQWRLLRCRMALHNPRFEFMLRTL" FT CDS complement(157902..159188) FT /transl_table=11 FT /locus_tag="pRL120159" FT /product="putative amidohydrolase" FT /note="similarity:fasta; SWALL:Q8GQG5 (EMBL:AF425838); FT Geobacillus kaustophilus; N-carbamoyl-L-amino acid FT amidohydrolase; lnC; length 409 aa; id=31.7; ungapped FT id=32.66; E()=2.3e-34; 410 aa overlap; query 14-417 aa; FT subject 2-405 aa" FT /note="similarity:fasta; SWALL:Q880G9 (EMBL:AE016867); FT Pseudomonas syringae; peptidase, m20/m25/m40 family; length FT 426 aa; id=40.58; ungapped id=41.27; E()=6.1e-57; 414 aa FT overlap; query 7-418 aa; subject 11-419 aa" FT /db_xref="GOA:Q1M4U8" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q1M4U8" FT /inference="similar to sequence:INSDC:AF425838" FT /inference="similar to sequence:INSDC:AE016867" FT /protein_id="CAK11872.1" FT /translation="MLETRSEPASLPEVDAEALHRMMEEVSVFGGGPGGAMTRLTLSQE FT DKAARDWLANWLKNSGLRLEIDPMGNMYGFLDWAGPDAPLVMSGSHLDSQPNGGRFDGA FT YGVIAACAAIDAIRKQVAAAGVTPKVNFCIVNWTNEEGARFQPSLLGSGVNAGELTLDF FT ALARKDGDGISVNQALDDIGYAGTFGPVIPDALIELHIEGSAELEKKGMRFAAFNRFWG FT NVKYRLAFIGRQAHTGPTPMAERHDALLAAAYLIAELKGFADQAGIDLHTSCGRLEVYP FT NSPNVVPGEAVMFIELRSAKPDVLARVEAQLKEKIEICAKKADVGFDVRSIDRRRAGNM FT DEGLVALAQDTAAGFGLETLLLDTIGGHDAVSMTAVSPAVVIAVPSVGGVIHHPTEFTT FT PEDRLLGTEILSAMLWKFCLNGNILKTTD" FT misc_feature complement(158217..158537) FT /note="Pfam match to entry PF07687.1 M20_dimer, score 17.9, FT E-value 0.0058" FT /inference="protein motif:Pfam:PF07687.1" FT misc_feature complement(158718..158939) FT /note="Pfam match to entry PF01546.13 Peptidase_M20, score FT 20.9, E-value 0.00032" FT /inference="protein motif:Pfam:PF01546.13" FT CDS complement(159181..159945) FT /transl_table=11 FT /locus_tag="pRL120160" FT /product="putative DeoR family transcriptional regulator" FT /note="similarity:fasta; SWALL:SRLR_ECOLI (SWALL:P15082); FT Escherichia coli; glucitol operon repressor; srlR; length FT 257 aa; id=34.53; ungapped id=34.81; E()=2.3e-21; 249 aa FT overlap; query 5-252 aa; subject 3-250 aa" FT /note="similarity:fasta; SWALL:Q9KWB9 (EMBL:AB039932); FT Agrobacterium rhizogenes; Riorf65 protein; riorf65; length FT 252 aa; id=43.37; ungapped id=43.37; E()=8.5e-33; 249 aa FT overlap; query 6-254 aa; subject 4-252 aa" FT /db_xref="GOA:Q1M4U7" FT /db_xref="InterPro:IPR001034" FT /db_xref="UniProtKB/TrEMBL:Q1M4U7" FT /inference="similar to sequence:UniProtKB:P15082" FT /inference="similar to sequence:INSDC:AB039932" FT /protein_id="CAK11873.1" FT /translation="MTDHPQARLQHILEELAKHGRVTVKELAAEFSVSPETVRRDLKQL FT EMEGHLRCIYGGGVTPRRDADQPISQRMRVNAREKAKIATLAARELRDHSKIFLDSGTT FT MLALSRYLVDRPLINIYTNSLDIIQTLSGVESNNVVAVGGVLRPSYRAFLGTDTLNVIR FT EHLFDIAFVSAVTVDINLGFMDLGEDEALVRRALRRHAKQVVMLADSSKFGRQGNFCTY FT NFRDVDLLITDAPPRADFLEKLEEAQVKVIYA" FT misc_feature complement(159247..159924) FT /note="Pfam match to entry PF00455.10 DeoR, score FT 211.9,E-value 1.2e-60" FT /inference="protein motif:Pfam:PF00455.10" FT misc_feature complement(159817..159882) FT /note="Predicted helix-turn-helix motif with score FT 1848.000, SD 5.48 at aa 57-78, sequence FT VTVKELAAEFSVSPETVRRDLK" FT CDS complement(160060..161883) FT /transl_table=11 FT /locus_tag="pRL120161" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q9KWC0 (EMBL:AB039932); FT Agrobacterium rhizogenes; Riorf64 protein; length 603 aa; FT id=54.2; ungapped id=54.85; E()=1.6e-114; 594 aa overlap; FT query 5-596 aa; subject 4-592 aa" FT /db_xref="GOA:Q1M4U6" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M4U6" FT /inference="similar to sequence:INSDC:AB039932" FT /protein_id="CAK11874.1" FT /translation="MTGTPLLKVRDLSVGLETGGGMRPIISDIGFDLAPREILGIIGAS FT GAGKTVLSRALVNWIDPPLKVTSGSVVYKSQNILDLPAQKLRMLRREIAYVGANPAGAL FT DPTLPVGQQIVEKLRAVAPEIAHEEARKRVIDLLGAVRIPSPQMRYHEYPSQFSGGMMQ FT RALIVDALVSNPAFLVADNVTQPLDVTVAAQVLRLMRELTTRFDTAIVFISSSLPLVSD FT AADQILVLAEGRVVERQATKALVDTPEHPYTRELISQIPKIWTSEAVAIDLPAETRKPI FT ISIRDATRSYRVRKRGTFASYSTVRAVRNVTFDVFPGENFGIVGESGCGKSTLMRLLSR FT LERPDSGQVLCDGQDITRLSGKGLLKFRRDFQLVLQDPFNSLPPRTAIGAIIEEPLKTH FT GIARGAELRDRVLSVMREVGLPGTLYDELPLGLSAGQRQRVNVARAMVLEPKVLIMDET FT LSSLDQTEQFKLLKLFEQLQAQHGLTYVYISHDLAMVRRVCNRVAVMYLGEVVEIADNS FT RLFFDPGHPYTKALLSAVPTLEERRYKPEECLLEGEPPSPIDLPPGCSFASRCPNAFGR FT CHKQSPVLTARGNKDLAACFLVENTLSHAAA" FT misc_feature complement(160360..160932) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 188.9, E-value 1e-53" FT /inference="protein motif:Pfam:PF00005.11" FT misc_feature complement(161185..161778) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 115.0, E-value 1.8e-31" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(161880..162806) FT /transl_table=11 FT /locus_tag="pRL120162" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q9KWC1 (EMBL:AB039932); FT Agrobacterium rhizogenes; Riorf63 protein; riorf63; length FT 305 aa; id=62.2; ungapped id=62.41; E()=1.4e-72; 299 aa FT overlap; query 8-306 aa; subject 6-303 aa" FT /db_xref="GOA:Q1M4U5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4U5" FT /inference="similar to sequence:INSDC:AB039932" FT /protein_id="CAK11875.1" FT /translation="MMSVTETDIPAVPVPATQRGASVARRIWRIALASNEFRFGAAIFI FT VLVLAALLYPELSGIDPTKMSVATRLHAPPFMGEKWSWTAPLGTDQIGRDMLVRSLVGL FT RYSLLIGLSTVLVMLIIGCSLGTIAGYYGGRVDMVIMRLTDAQLSIPMIILAITVLGVS FT RPTIPAIILVLGLSSWPVYARVTRSVVMTERKREYVRAAEIYGASDFRIMVRLLAPLVL FT PPIIFVSVLDVARMMIFESILGFIGLGVQPPTPTFGNIIADGRKYLLNAWWIATMPGVF FT LCLCLTSINLMGASLERARNRIYGGKS" FT misc_feature complement(161889..162497) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 150.9, E-value 2.7e-42" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(161925..161993,162036..162095, FT 162114..162173,162282..162350,162411..162479, FT 162636..162704)) FT /locus_tag="pRL120162" FT /note="6 probable transmembrane helices predicted at aa FT 35-57, 110-132, 153-175,212-231, 238-257 and 272-294" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(162803..163783) FT /transl_table=11 FT /locus_tag="pRL120163" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q9KWC2 (EMBL:AB039932); FT Agrobacterium rhizogenes; Riorf62 protein; length 319 aa; FT id=64.57; ungapped id=64.57; E()=9.2e-71; 319 aa overlap; FT query 8-326 aa; subject 1-319 aa" FT /db_xref="GOA:Q1M4U4" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4U4" FT /inference="similar to sequence:INSDC:AB039932" FT /protein_id="CAK11876.1" FT /translation="MFILSFLVRRLAQGALIVFLVTLLIFTLLRVVPGDPVRLMAGGMA FT PEALIEQIAKDMGLRDPILVQFGRYMSGVVRGDLGQSFVRPASGASTGGSSFGDSTRGE FT RAEVLTLIADTLPMTLQLGGLAIFFALVFSFLVGIPGGLAPGRWPDRVAFYISSIFISL FT PNFWLGIVLAMLLSVKLGWLPAIGYSGFAYTILPAIVLAVELAPVLIRTLTGSVATVMM FT EPFIAVGNVRGLSRSRIIVAHALRNASVPLLNLIGIQISGLLGGVLVVEFIFDYPGLGL FT LTINAVLQRDFPLIQGIAIVTSAIFVFINIAVDLIATMIDPRLEY" FT misc_feature complement(162806..163438) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 136.7, E-value 5.1e-38" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(162836..162904,162962..163030, FT 163091..163159,163169..163237,163256..163324, FT 163352..163420,163688..163756)) FT /locus_tag="pRL120163" FT /note="7 probable transmembrane helices predicted at aa FT 10-32, 122-144, 154-176,183-205, 209-231, 252-274 and FT 294-316" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(163914..165497) FT /transl_table=11 FT /locus_tag="pRL120164" FT /product="putative component of ABC transporter" FT /note="similarity:fasta; SWALL:Q9KWC3 (EMBL:AB039932); FT Agrobacterium rhizogenes; Riorf61 protein; length 521 aa; FT id=64.19; ungapped id=64.8; E()=1.3e-138; 525 aa overlap; FT query 3-527 aa; subject 2-521 aa" FT /db_xref="GOA:Q1M4U3" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q1M4U3" FT /inference="similar to sequence:INSDC:AB039932" FT /protein_id="CAK11877.1" FT /translation="MNDISRRNFLAGLGAAGTGAGLLQINPDFLFSSAFAQSGKTVVFL FT SAENITGNWDPTGHTTLSQKNIEGFVMGFLTRTPMTVEKPDEVVYELATSIKLLDPNKL FT EIKLREGVKFHDGKPFKAEDVKATFEYGSGPDRPAQFYPGPTETLVITTPDDYTVIVDT FT SKGGYPAHLFIFLASYLPIMSATDVAGGPTGPLTQRLNGTGPFKFVKQEGNATILEAYP FT DYFLGTPKIPGISFNFVGDSTTRMLSLLNGQASIVERLEPEQVTSLQGNDKIAISSVVS FT VENKYLWFRCSKAPFDNPLIRKAACHAIDRSMIVEILGSAGHASSNYVSPVKFGYIDLP FT NYPEYSPEKCQALLAEAGFPKGEGLPPLEYITSVGFYPKTKEYGEVITAMLQEQGFQVS FT LSVLEIAAWNERLYDRPGGGPGHMVDCGWSTGSPEPDLVLRTHFHSTSKRITGIVDKEL FT DATLDKERSAPSLDERKKILQTETMPMLAEKVPALSLFTSVMIHAMDKSLAGLFIYPDG FT SMDASKAAFS" FT misc_feature complement(164727..165035) FT /note="Pfam match to entry PF00496.9 SBP_bac_5, score 73.5, FT E-value 5.6e-19" FT /inference="protein motif:Pfam:PF00496.9" FT sig_peptide complement(165390..165497) FT /locus_tag="pRL120164" FT /note="Signal peptide predicted for pRL120164 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.992) with cleavage FT site probability 0.947 between residues 36 and 37" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS 165828..166190 FT /pseudo FT /transl_table=11 FT /locus_tag="pRL120165" FT /note="Similar to codons 75 to 65 of Rhizobium loti mll1719 FT protein SWALL:Q98JY9 (EMBL:AP002998) (135 aa)" FT /note="similarity:fasta; SWALL:Q98JY9 (EMBL:AP002998); FT Rhizobium loti; mll1719 protein; length 135 aa; id=62.29; FT ungapped id=62.29; E()=2.5e-12; 61 aa overlap; query 1-61 FT aa; subject 75-135 aa" FT /note="conserved hypothetical protein, pseudogene" FT /inference="similar to sequence:INSDC:AP002998" FT CDS complement(166225..167235) FT /transl_table=11 FT /locus_tag="pRL120166" FT /product="putative transmembrane protein" FT /note="similarity:fasta; SWALL:Q8FV33 (EMBL:AE014595); FT Brucella suis; hypothetical protein bra1018; length 355 aa; FT id=44.92; ungapped id=45.62; E()=6.7e-54; 325 aa overlap; FT query 4-326 aa; subject 33-354 aa" FT /db_xref="GOA:Q1M4U2" FT /db_xref="UniProtKB/TrEMBL:Q1M4U2" FT /inference="similar to sequence:INSDC:AE014595" FT /protein_id="CAK11879.1" FT /translation="MVRPVRAIVIAVLVLLVAFASAWSSLALWYRLPLPEVGRQASAIL FT FGLLGAWVIVALFGRRRFRAVLAFAAAFVLVLVWWSTIEPPANGAWAPDVARQVTGEFD FT GDLLTLTNVRDFEWRSATDFTERWTTRSYDLNKLKSVDMFMSYWSGPTIAHVIMSFGFD FT DGRYLAWSIEVRRLSGGSFSPLADLFKNSPLVILAADERDVIGLRSNFRGEDVQIYRLR FT ATPAAARLLLREYVSDANKLAATPAFYNSLTTNCTTTIVKMMRVAGDAVPTDWRLVVNG FT YLPEYAYDRGALDISVPLSQLRSAAHIAARAHDDGVSPNFSQAIRVGVPSPLGAL" FT misc_feature complement(join(166987..167040,167059..167127, FT 167155..167223)) FT /locus_tag="pRL120166" FT /note="3 probable transmembrane helices predicted at aa FT 5-27, 37-59 and 66-83" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(167164..167235) FT /locus_tag="pRL120166" FT /note="Signal peptide predicted for pRL120166 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.999) with cleavage FT site probability 0.442 between residues 24 and 25" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(167491..168753) FT /transl_table=11 FT /locus_tag="pRL120167" FT /product="putative MFS family transporter" FT /note="Similar, but extended at the N-terminus, to FT Agrobacterium tumefaciens agr_l_1145p SWALL:Q7CUJ6 FT (EMBL:AE008255) (431 aa)" FT /note="similarity:fasta; SWALL:Q7CUJ6 (EMBL:AE008255); FT Agrobacterium tumefaciens; agr_l_1145p; length 431 aa; FT id=89.78; ungapped id=89.78; E()=1.9e-130; 411 aa overlap; FT query 36-446 aa; subject 21-431 aa" FT /db_xref="GOA:Q1M4U1" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1M4U1" FT /inference="similar to sequence:INSDC:AE008255" FT /protein_id="CAK11880.1" FT /translation="MQHSNRSTGSSAVSAPSLEPWGGKELVMPLAIFALTIAAYAIGTT FT EFVIVGLLPTVATDLHITLSLAGLIVSVYALGVTFGAPILTALTGKIERKPLLLGLMTL FT FVIGNTIAALSPSYEMLLVARVIAAFAHGVFFSVGATIAADLVPENRRASAIAMMFMGL FT TVAIVTGVPIGTYIGQIYGWRATFWAVAALGVIAFVAIAALLPNTLKKAPPASILDQVR FT VLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQDVTGFSQSSVSLILVLYGIAIAAGNI FT GGGKIANRNPVKALVGLFLAQAIVLLVFSFTAVSPVLTLITLAALGFLSFANVPGLQLY FT VVQLAKEHRPGAVDVASALNIAAFNLGIAIGAWLGGLVVESPLGLASTPWIGAILVAVA FT LLLTIWSGALDRRASPSLRVA" FT misc_feature complement(167515..168675) FT /note="Pfam match to entry PF00083.10 Sugar_tr, score FT -45.7, E-value 1.1e-05" FT /inference="protein motif:Pfam:PF00083.10" FT misc_feature complement(join(167527..167595,167623..167691, FT 167728..167796,167809..167868,167905..167973, FT 168001..168069,168127..168195,168223..168291, FT 168325..168393,168406..168465,168502..168570, FT 168598..168666)) FT /locus_tag="pRL120167" FT /note="12 probable transmembrane helices predicted at aa FT 56-78, 88-110, 123-142,147-169, 181-203, 213-235, 255-277, FT 287-309, 322-341,346-368, 381-403 and 413-435" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(167614..168651) FT /note="Pfam match to entry PF07690.1 MFS_1, score FT 201.1,E-value 2.1e-57" FT /inference="protein motif:Pfam:PF07690.1" FT CDS 168852..169754 FT /transl_table=11 FT /locus_tag="pRL120168" FT /product="putative LysR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q8U808 (EMBL:AE009357); FT Agrobacterium tumefaciens; transcriptional regulator, lysr FT family; length 302 aa; id=84.98; ungapped id=84.98; FT E()=5.6e-100; 293 aa overlap; query 1-293 aa; subject 8-300 FT aa" FT /db_xref="GOA:Q1M4U0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M4U0" FT /inference="similar to sequence:INSDC:AE009357" FT /protein_id="CAK11881.1" FT /translation="MEVFVMAAELQSFSAAGRRLKMSPSAVSKLVTRIEDRLGTRLLVR FT STRTMTLTPEGEVYLSRARRILTDITETEQIVAGGGKMIPRGLLRVNASVGFGERHLLA FT LIPAFLELYPEVQLDISLTDGIIGLIEERTDIAIRSGAMDDSSLKARKLLESRRVIVAS FT PAYLDAKGIPKTPQDLANHNCFSFNFRRSLNEWPFRNPGTSEVYRLPVTGNTAVNSGMV FT MRRLCLSGSGLGRVGQFHVQPDIDAGKLIPLLEEYNPHDMEQIHAVFAGHEHLAARIRA FT FIDFLAEHLSDEGKSEPLP" FT misc_feature 168852..169022 FT /note="Pfam match to entry PF00126.10 HTH_1, score FT 63.6,E-value 5.5e-16" FT /inference="protein motif:Pfam:PF00126.10" FT misc_feature 168882..168947 FT /note="Predicted helix-turn-helix motif with score FT 1521.000, SD 4.37 at aa 11-32, sequence FT QSFSAAGRRLKMSPSAVSKLVT" FT misc_feature 169095..169724 FT /note="Pfam match to entry PF03466.5 LysR_substrate, score FT 143.0, E-value 6.7e-40" FT /inference="protein motif:Pfam:PF03466.5" FT CDS complement(169881..170681) FT /transl_table=11 FT /locus_tag="pRL120169" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q89FQ2 (EMBL:AP005959); FT Bradyrhizobium japonicum; ABC transporter permease protein; FT length 251 aa; id=38.93; ungapped id=39.58; E()=3.8e-33; FT 244 aa overlap; query 19-262 aa; subject 1-240 aa" FT /db_xref="GOA:Q1M4T9" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4T9" FT /inference="similar to sequence:INSDC:AP005959" FT /protein_id="CAK11882.1" FT /translation="MEGIKDMSKPFLTVYCLVIYAFLLAPILVVVGASFNAGAFLTFPP FT QGLSFRWYLVFFNNEVFMRAIRTSLWIATLTTIISGIIGTMAAMFYVQYAGKFKDTVRI FT AMLAPLLLPEVLTAISLLFFVYSIGIGTQTIVGLLLGHVLITLPFVFINVSASMESYDP FT SWSLAAQSLGAGRFTRFRRIMLPLIKPGVIGGCLFAFIVSFDVFTISFMLKNVGTSTLP FT IQLFDYLRTNFTPEAAAVSTCSIILTLIVVVVCEKILGLRIHRF" FT misc_feature complement(169887..170498) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 48.0, E-value 2.6e-11" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(169917..169985,170043..170111, FT 170226..170294,170304..170372,170406..170474, FT 170577..170645)) FT /locus_tag="pRL120169" FT /note="6 probable transmembrane helices predicted at aa FT 13-35, 70-92, 104-126,130-152, 191-213 and 233-255" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(170669..171526) FT /transl_table=11 FT /locus_tag="pRL120170" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q89Q86 (EMBL:AP005946); FT Bradyrhizobium japonicum; ABC transporter permease protein; FT length 291 aa; id=41.42; ungapped id=42.49; E()=2.4e-35; FT 280 aa overlap; query 2-277 aa; subject 3-279 aa" FT /db_xref="GOA:Q1M4T8" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q1M4T8" FT /inference="similar to sequence:INSDC:AP005946" FT /protein_id="CAK11883.1" FT /translation="MNAGAKKRFGPLLLIAPAAILLGFFLVLPYLNIIVMSFRVPGQGT FT PYAPGFTTGNYSKFFSDIFYISQMVNTLWIGFVTTFACLILGYPVAWQLARGTSAIRSL FT GYGLVLSPLLVGIVIRSYGWTILLGNNGLINRALAGWGVIDGPLPLMYNALGIVIALVH FT VFLPFMILPIMSAIQGIDPSLESAARSLGASKFKAFRRITLPLSLPGIQAGCILVFVLS FT LSAYVTPSLIGGLRVKTMAVTVVDALIDTFQWPFGSALALMLSVTGAIVVVIFGRLTVM FT KWKA" FT misc_feature complement(170675..171322) FT /note="Pfam match to entry PF00528.10 BPD_transp_1, score FT 27.6, E-value 3.7e-05" FT /inference="protein motif:Pfam:PF00528.10" FT misc_feature complement(join(170699..170767,170849..170917, FT 171014..171082,171149..171217,171251..171319, FT 171425..171493)) FT /locus_tag="pRL120170" FT /note="6 probable transmembrane helices predicted at aa FT 12-34, 70-92, 104-126,149-171, 204-226 and 254-276" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(171523..172578) FT /transl_table=11 FT /locus_tag="pRL120171" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q89Q89 (EMBL:AP005946); FT Bradyrhizobium japonicum; ABC transporter ATP-binding FT protein; length 379 aa; id=47.86; ungapped id=49.7; FT E()=9.7e-52; 351 aa overlap; query 4-342 aa; subject 24-373 FT aa" FT /db_xref="GOA:Q1M4T7" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M4T7" FT /inference="similar to sequence:INSDC:AP005946" FT /protein_id="CAK11884.1" FT /translation="MTEVSIEKLTKDYGQGLAVNGISIKIAEGEFISLLGPSGCGKTTT FT LKMIAGFEDATHGAIRFDGRDVVHMPVEKRDIGMVFQNYALFPHMTVEKNLAFGLEMRR FT IPKGEIRTRISEVLDMVQLAGYADRYPRQLSGGQQQRVALARALVIEPKILLLDEPLAN FT LDAKLREEMRIFIRDLQRRVGITTVYVTHDQAEAMTMSDRVVVMFSGRIAQIGTPSDIY FT ERPANLEVAEFVGQVNIVHGKVGKAAGRTVVSTVFGEVEVADDYADDTELVLALRPEAV FT ELLPISSKGAGVPAKVLSSYYSGSLVDYRLQLADGAVVNVQTFPRIRFADGEEVLLRAP FT SDRFWPLGSAA" FT misc_feature complement(171949..172494) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 252.8, E-value 5.8e-73" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(172686..173786) FT /transl_table=11 FT /locus_tag="pRL120172" FT /product="putative substrate-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q89Q44 (EMBL:AP005947); FT Bradyrhizobium japonicum; ABC transporter substrate-binding FT protein; length 348 aa; id=32.47; ungapped id=34.54; FT E()=1.8e-29; 351 aa overlap; query 25-366 aa; subject 9-347 FT aa" FT /db_xref="GOA:Q1M4T6" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q1M4T6" FT /inference="similar to sequence:INSDC:AP005947" FT /protein_id="CAK11885.1" FT /translation="MRRSGKPPAQRSRIATKGNWKMMDLTRRQTLAGMGAFAAAGLMGL FT PARAQSKTLIVPTLGGVWEQYWRSTVAPEFTKQSGAAVTLDVGNGRVFGANLRAAGVAK FT PPYSIVMTNEVFASGLRKEGFFEKLDLTKLSNYADLYPLAKKTDGWGAIGAVSPIGIGY FT RTDLVKTPPKSWKDLWTNPEFKGKIGLYNFANSAGKMELLLFSRIFGKDQYDVDAGFAA FT LEKLGSVIQVDFNLSTGLASGEIVVAPFDFGEIARLKAQGLPVDCIVPEEGMFMFDQTI FT NILANGPEKELAYQYANFLLSPDVQTMMMRQFFISPTNSKVMVPADLKASVPVSGADMD FT KILTWDWNFVNEKQGELAERWAKTIK" FT misc_feature complement(172866..173690) FT /note="Pfam match to entry PF01547.11 SBP_bac_1, score FT 35.7, E-value 1.4e-07" FT /inference="protein motif:Pfam:PF01547.11" FT sig_peptide complement(173640..173786) FT /locus_tag="pRL120172" FT /note="Signal peptide predicted for pRL120172 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.975 between residues 49 and 50" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(173811..174785) FT /transl_table=11 FT /locus_tag="pRL120173" FT /product="putative Fe-containing oxidoreductase" FT /note="similarity:fasta; SWALL:Q9I6Y5 (EMBL:AE004452); FT Pseudomonas aeruginosa; probable oxidoreductase; length 320 FT aa; id=36.53; ungapped id=40.41; E()=5e-33; 323 aa overlap; FT query 18-322 aa; subject 4-313 aa" FT /note="similarity:fasta; SWALL:Q881B6 (EMBL:AE016866); FT Pseudomonas syringae; oxidoreductase, 2og-fe; length 337 FT aa; id=37.99; ungapped id=40.85; E()=1.5e-30; 329 aa FT overlap; query 18-324 aa; subject 6-333 aa" FT /db_xref="GOA:Q1M4T5" FT /db_xref="InterPro:IPR005123" FT /db_xref="UniProtKB/TrEMBL:Q1M4T5" FT /inference="similar to sequence:INSDC:AE004452" FT /inference="similar to sequence:INSDC:AE016866" FT /protein_id="CAK11886.1" FT /translation="MSVSNANTASSNGVGAGIPVIDVGPFIRNEVGSADVVKAIEAACR FT DTGFFLVTGHGVSLDVTSRLYQLARAFFDYPQDWKTTQGRGTGVMGGVAFSPLAEEALA FT ATLGIKTPGDYKESLNFGQNLPGDTWPNRPEGIERAFRDYFKEMEILAKHMRRIFCQAI FT GLDQDYFEPSFENHLSALRVINYPEQDEAPLPGQMRAGVHTDYGFMTILRSEASAGGLQ FT VRNRNGDWLDAPSIEGAYVINIADAFMRWSNDEWVSTPHRVANPPSGFKGTARRQSIPF FT FLNPSKDTVIECLPPFLKGGAKYEPITYGEYIDLKTKQAFSKG" FT misc_feature complement(173931..174257) FT /note="Pfam match to entry PF03171.7 2OG-FeII_Oxy, score FT 76.5, E-value 7e-20" FT /inference="protein motif:Pfam:PF03171.7" FT CDS 174836..175999 FT /transl_table=11 FT /locus_tag="pRL120174" FT /product="putative PfkB family kinase" FT /note="similarity:fasta; SWALL:O24767 (EMBL:AB005149); FT Exiguobacterium acetylicum; guanosine kinase; gsK; length FT 303 aa; id=25.81; ungapped id=26.78; E()=1.7e-07; 306 aa FT overlap; query 79-380 aa; subject 3-301 aa" FT /note="similarity:fasta; SWALL:Q9RS15 (EMBL:AE002063); FT Deinococcus radiodurans; carbohydrate kinase, pfkb family; FT length 383 aa; id=38.48; ungapped id=39.33; E()=1.2e-35; FT 369 aa overlap; query 20-382 aa; subject 14-380 aa" FT /db_xref="GOA:Q1M4T4" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q1M4T4" FT /inference="similar to sequence:INSDC:AB005149" FT /inference="similar to sequence:INSDC:AE002063" FT /protein_id="CAK11887.1" FT /translation="MLSISKITKLQPSELDKMDDLAPQEAAVLAIIKDNPFAGQQEIAS FT MLGLARSTVAAHIVQLMQKGYILGRGYVMPARTRAVCIGGAVLDHKYRAKEALVFETSN FT PVDGIRSLGGVARNVAENLALLGTSTSFVSIVGDDEGGRAILKHMRDRGIDVSQVVTTS FT ERPTAEYAAILDPQGELVLGIADMGIFDLLLPNHIERIWPHLAAASWVFSDCNPPAEML FT AALIAKRQGGARFKLAIDAVSTPKAARLPKNLTGIDLLFMNIDEANSILKRQGHETIED FT AREAALALQAAGAREAIVTMAARGIAVAGIEGAKTFPAVTARPIDITGAGDAMIAGTLH FT SILNGENTYAAARTGALLATLTTESTASVHTELSERFLEANMHRLVG" FT misc_feature 175070..175963 FT /note="Pfam match to entry PF00294.10 PfkB, score FT 141.8,E-value 1.5e-39" FT /inference="protein motif:Pfam:PF00294.10" FT CDS 176030..176959 FT /transl_table=11 FT /locus_tag="pRL120175" FT /product="putative uncharacterised enzyme involved in FT pigment biosynthesis" FT /note="similarity:fasta; SWALL:Q9L393 (EMBL:AJ277403); FT Erwinia chrysanthemi; IndA protein; length 316 aa; FT id=45.87; ungapped id=45.87; E()=3e-46; 303 aa overlap; FT query 7-309 aa; subject 12-314 aa" FT /note="similarity:fasta; SWALL:Q8RCT3 (EMBL:AE013005); FT Thermoanaerobacter tengcongensis; uncharacterized enzyme FT involved in pigment biosynthesis; indA; length 307 aa; FT id=59.53; ungapped id=59.53; E()=2.5e-57; 299 aa overlap; FT query 8-306 aa; subject 7-305 aa" FT /db_xref="InterPro:IPR007342" FT /db_xref="UniProtKB/TrEMBL:Q1M4T3" FT /inference="similar to sequence:INSDC:AJ277403" FT /inference="similar to sequence:INSDC:AE013005" FT /protein_id="CAK11888.1" FT /translation="MTLMKPRLSREMAEAIAAGSPVVALESTIITHGMPYPANLETALG FT VETVIRENGAIPATIAVVKGELRVGLEHDELEELAQSKGIVKASGRDLAVAMIRGQSAG FT TTVSATMLMADLAGIDVFATGGVGGVHRGAEQTFDISADLTELGRTKTAVVCAGVKSIL FT DIAKTLEYLETQRVPVIAYGTEDFPAFFTRRSGFKADHRLDTPEEIAKAMWLHHQLGTG FT TGLLIANPIPEASALAPDFIDGTIADAVRDADERGIDRKELTPFLLARINELTKGESLK FT ANIELVKNNARLAARIAVAYAPLKKARN" FT misc_feature 176057..176932 FT /note="Pfam match to entry PF04227.2 Indigoidine_A, score FT 593.2, E-value 2e-175" FT /inference="protein motif:Pfam:PF04227.2" FT CDS 176981..177790 FT /transl_table=11 FT /locus_tag="pRL120176" FT /product="putative enoyl-CoA hydratase" FT /note="similarity:fasta; SWALL:Q9AHX8 (EMBL:AF290950); FT Pseudomonas putida; Fadb1X; fadb1X; length 257 aa; FT id=33.33; ungapped id=36.69; E()=7.3e-19; 273 aa overlap; FT query 1-266 aa; subject 1-255 aa" FT /note="similarity:fasta; SWALL:Q891F2 (EMBL:AE015944); FT Clostridium tetani; putative crotonase; length 260 aa; FT id=37.78; ungapped id=38.86; E()=4.3e-23; 217 aa overlap; FT query 1-214 aa; subject 1-214 aa" FT /db_xref="GOA:Q1M4T2" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q1M4T2" FT /inference="similar to sequence:INSDC:AF290950" FT /inference="similar to sequence:INSDC:AE015944" FT /protein_id="CAK11889.1" FT /translation="MSYETILYEKDASDKFATITINRPDKMNAMNKVVIREIDAAVAAA FT VADPDINALVITGAGRAFSSGYDLQGGDFDVDIDFWREDMSENAEALLNIWRAPIPVIA FT SVNGYALAGALELMMCCDLAIAADNAKFGEPEVRHNSGPPALMMPWLLATRDVRWLMFT FT GDMVDAQEALRMHLINKIVPADQLKEKTENLARKLARMPLPALRYTKASINNQQMVAGL FT MPSFQYNIEAIAALHVTKAGRDWMANLAKMSLKEYLAFRDNPFKGLD" FT misc_feature 177029..177529 FT /note="Pfam match to entry PF00378.8 ECH, score FT 122.8,E-value 8.3e-34" FT /inference="protein motif:Pfam:PF00378.8" FT CDS 177801..179906 FT /transl_table=11 FT /gene="pauA" FT /locus_tag="pRL120177" FT /product="putative pimeloyl-CoA synthetase" FT /note="similarity:fasta; SWALL:Q9I4V6 (EMBL:AE004534); FT Pseudomonas aeruginosa; pimeloyl-coa synthetase; pauA; FT length 715 aa; id=33.94; ungapped id=34.84; E()=9.5e-60; FT 704 aa overlap; query 1-695 aa; subject 10-704 aa" FT /note="similarity:fasta; SWALL:Q89PN4 (EMBL:AP005947); FT Bradyrhizobium japonicum; blr3446 protein; length 707 aa; FT id=34.89; ungapped id=35.96; E()=2.3e-64; 705 aa overlap; FT query 7-698 aa; subject 5-701 aa" FT /db_xref="GOA:Q1M4T1" FT /db_xref="InterPro:IPR003781" FT /db_xref="UniProtKB/TrEMBL:Q1M4T1" FT /inference="similar to sequence:INSDC:AE004534" FT /inference="similar to sequence:INSDC:AP005947" FT /protein_id="CAK11890.1" FT /translation="MPANTIDAMRALMAPRSVAVVGATERADASSSYVMKNLMRFGYQG FT KIIPVHPKAEAVFGYRAAPSLRALDAAPDVAVIGIAADKVIAALEEAGSTGVKAAVVLA FT SGFAELDEAGRERQRQLVEIAGRYGMAICGPNCLGLFNLTSGAALYSSSLSANLQKGRF FT AILSHSGASAIALGNTARFGLSHIVSSGNSAATDIPAYLEFLASDEDTGTVGIVIEAIR FT APEELAAAMEKMHAANKPVIALRAGRSSRGAQATAAHTGSLAGSNDAYRAFFRRTGIIE FT VPDMDGFMETATLCLTLKTRPVKPGVAIVGVSGGGVAHVSDVADEAGLSMPDLRPETVA FT KMKTLLPSFATPQNPLDTTGIVFADGQIYRDVLTAVSEDPSIGLIVASQDAPVGLDDFC FT ACEYLGIAQAVSDYAEAGKAPIVFMSNLSSGHHPAVEGKLSNVPVLRGTKSALTAIKSL FT IDQNRLVSWPGAAASDRKSLPAGALTERQAKNLLAAEGLPVPQQYLVTSADKAASAAAK FT LSFPVVMKIESPDIQHKTEAGGVKLGVASEPEVRQAFDAIMASARAYAPDADLRGVSVQ FT EMVTGGVEALVGLVRHEPFGFGLVVGIGGVLVELVNDSAFDLLPIDLARADAMIGKTKL FT ASLLEGYRGSPRADRQALAKLLVKLSDFAARYGDDIEAVDLNPVAVLPDGEGVRILDAL FT IIARAKT" FT misc_feature 177834..178160 FT /note="Pfam match to entry PF02629.7 CoA_binding, score FT 59.4, E-value 9.5e-15" FT /inference="protein motif:Pfam:PF02629.7" FT CDS complement(179884..180882) FT /transl_table=11 FT /locus_tag="pRL120178" FT /product="putative nucleoside hydrolase" FT /note="similarity:fasta; SWALL:IUNH_CRIFA (SWALL:Q27546); FT Crithidia fasciculata; inosine-uridine preferring FT nucleoside hydrolase; iunH; length 314 aa; id=35.36; FT ungapped id=35.59; E()=1.5e-32; 311 aa overlap; query 3-312 FT aa; subject 2-311 aa" FT /note="similarity:fasta; SWALL:Q8FXQ9 (EMBL:AE014505); FT Brucella suis; inosine-uridine preferring nucleoside FT hydrolase; iunH; length 332 aa; id=68.48; ungapped FT id=68.48; E()=4.5e-83; 311 aa overlap; query 1-311 aa; FT subject 22-332 aa" FT /db_xref="GOA:Q1M4T0" FT /db_xref="InterPro:IPR001910" FT /db_xref="UniProtKB/TrEMBL:Q1M4T0" FT /inference="similar to sequence:UniProtKB:Q27546" FT /inference="similar to sequence:INSDC:AE014505" FT /protein_id="CAK11891.1" FT /translation="MAQKIIIDTDPGQDDALAILLALASPEIEVLGIVGAAGNVPLLLT FT SKNIRKICELAGRPDIKVFAGCDRPMTGPLVTAEHVHGATGMDGADLPEPSMPMQEQHG FT VDFIIDTLQSEPAGAVTVCTLGPLTNLGKALTRAPEIAGRIKQLVLMGGGLFEGGNITP FT AAEFNIYVDPPAAAVVFGSGVPIVMMPLDVTHKTLTTRVRVAAIQALGTPLSDAVVGWL FT HYFERFDVAKYGSDGGPLHDPNVIAYLLKPELYSGRFCNVEIETESELTKGMTVADWWD FT VSGRPKNALFMRDVDADGFYALLTERLSWLGRADTAAEAAPGLLVTSSRAR" FT misc_feature complement(179947..180879) FT /note="Pfam match to entry PF01156.8 IU_nuc_hydro, score FT 355.9, E-value 5.5e-104" FT /inference="protein motif:Pfam:PF01156.8" FT CDS complement(180909..184379) FT /transl_table=11 FT /locus_tag="pRL120179" FT /product="putative pyruvate ferredoxin oxidoreductase" FT /note="similarity:fasta; SWALL:IORA_PYRKO (SWALL:O07835); FT Pyrococcus kodakaraensis; indolepyruvate oxidoreductase FT subunit IorA; iorA; length 647 aa; id=23.91; ungapped FT id=28.39; E()=5.4e-06; 665 aa overlap; query 58-683 aa; FT subject 38-636 aa" FT /note="similarity:fasta; SWALL:Q880K1 (EMBL:AE016867); FT Pseudomonas syringae; pyruvate ferredoxin/flavodoxin FT oxidoreductase family protein; length 1160 aa; id=51.36; FT ungapped id=52.24; E()=1.5e-216; 1133 aa overlap; query FT 14-1133 aa; subject 6-1132 aa" FT /db_xref="GOA:Q1M4S9" FT /db_xref="InterPro:IPR019752" FT /db_xref="UniProtKB/TrEMBL:Q1M4S9" FT /inference="similar to sequence:UniProtKB:O07835" FT /inference="similar to sequence:INSDC:AE016867" FT /protein_id="CAK11892.1" FT /translation="MSIHTQPDIPEPKISLDDRYTLERGRILVSGTQALVRLPMIQRQR FT DLARGLNTAGYVSGYRGSPLAGFDREMARAKKFLDAAHVKFQPGLNEDMAATAVWGTQQ FT TGMFQGLRYDGVFAMWYGKGPGVDRSMDVIRHANAIGTNANGGVLLLVGDDHGAVSSTL FT PHQSEHNLISAMVPMLSPAGIGEYIDYGLIGWAMSRYSGAWVGFKCQTEIVECSATVDL FT DPDRPLIVMPDDVFAPDGLSLRWPDGPHAMELRLERKMLAVQAFARANHLDRAVWGATG FT RAKLGIVSTGKSWLDLLGALALLGIDQARAADLGLALYKVGMVWPLEPQGIAEFAARVD FT ELLVVEEKRSILEDQIKAQLFNLPADRRPSVFGKAGENGAPLLQAIGEIGTLSVAKAIL FT SRLGDFDAALQAKARFVDEMALAMEIEATALKREAYFCSGCPHSVSTRLPEGSRASTGI FT GCHMMIIGNEDRNTSTFTQMGGEGGSWIGLSPFTDEKHIFVNMGDGTYFHSGVLAIRAA FT IAAKVNATYKILYNDAVAMTGGQKHDGDVTVPGIVSQMLAEGATRVVVVAERPDVWQGN FT LPRAVSVHHRDELDAVQRELRDIPGITVLIYDQVCAAEKRRRRKRGAYPVSDKRAFINE FT LVCEGCGDCSAVSNCISIEPQETEFGRKRRINQSSCNTDLSCIKGFCPSFVTVEGGSIR FT KPAAKSKSVKTDDLPLPVFTATFETPYSMLLAGIGGTGVITVSAILAQAALLDGLALTT FT LDQTGLAQKNGSVVSHIRLANNPAQIHAARVGPGESDLVLGFDIVVAAQKNSLTSFAKN FT KTRAVIDDHFAPTASFVKDTTIDFRQEATLKSLRRAAGDNAVETVAATDLATALMGDAV FT AANMFLLGHAWQRGLVPINLAAIDKAIELNGTGIAMNRAAFGWGRRAAVDIEAVAREAR FT FVKAEPKAETLDEIVAKRVAFLTDYQSAAYAKRYTDLVGVAASAEARLGGQTGFTEAVA FT KNAFRLMAYKDEYEVARLHRDRSFERKLSEQFEGDFKIKHHLAPPMISKIDRRTGHPAK FT IAFGAWIRPAFAVLEKLKFLRGTWLDPFGRTAERRLERQLIGDYVTLVIELSQSLDAGN FT PSVATELAGLPDMIRGFGHVKLASIQRFEKRKNDLLAKWRASEPLTHVA" FT misc_feature complement(181629..182195) FT /note="Pfam match to entry PF01558.6 POR, score FT -12.9,E-value 0.0001" FT /inference="protein motif:Pfam:PF01558.6" FT misc_feature complement(182538..183077) FT /note="Pfam match to entry PF02775.6 TPP_enzyme_C, score FT 86.1, E-value 8.7e-23" FT /inference="protein motif:Pfam:PF02775.6" FT CDS complement(184380..185792) FT /transl_table=11 FT /locus_tag="pRL120180" FT /product="putative oxidoreductase" FT /note="similarity:fasta; SWALL:Q986W2 (EMBL:AP003011); FT Rhizobium loti; mlr7184 protein; length 467 aa; id=56.67; FT ungapped id=56.79; E()=1.5e-85; 457 aa overlap; query 3-458 FT aa; subject 2-458 aa" FT /db_xref="GOA:Q1M4S8" FT /db_xref="InterPro:IPR006094" FT /db_xref="UniProtKB/TrEMBL:Q1M4S8" FT /inference="similar to sequence:INSDC:AP003011" FT /protein_id="CAK11893.1" FT /translation="MPSDRLSRLLARLENRLDAAAILSGDAVPDAYCADAAAQGQRPLA FT VLRPRNCADVSAILSAANDLGQPLVVQGGRTGLSGGSRPVADEVSLSLERMSSIESIDT FT VAQTLIAGAGTPMQVVQQGASDAGLFFGVDIGARGSATVGGNIGTNAGGIRVLRYGMYR FT AQVMGLEAVLADGTVLTSLKGLPKDNSGYDLNQLFIGSEGTLGIITRACLKLHPKPKIE FT RNAFLALPSLAAAQDLLSKLRVELAGLLSAFEVIFPNVYEGTVAHMGIRPPVAPRAGMY FT AMVEIQGQAPDQDNERFETVLAAALEDGLASDVVLSNSVREFQTLWAIRDGINGFLTAC FT GQNAGYDISVPLGRMQEFLDATAQSISMVDPGAVSFIFGHLGDGNLHYCMVTSREKDVA FT KAVFSGIEQVGGGVSAEHGIGTDKVGYLNYARSEAEIATMRRLKAAFDPNAILNRGRVF FT AAPVSVAQMERA" FT misc_feature complement(184422..185141) FT /note="Pfam match to entry PF02913.7 FAD-oxidase_C, score FT 185.3, E-value 1.2e-52" FT /inference="protein motif:Pfam:PF02913.7" FT misc_feature complement(185181..185666) FT /note="Pfam match to entry PF01565.10 FAD_binding_4, score FT 211.3, E-value 1.8e-60" FT /inference="protein motif:Pfam:PF01565.10" FT CDS 185994..186749 FT /transl_table=11 FT /locus_tag="pRL120181" FT /product="putative GntR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q92WG1 (EMBL:AL591985); FT Rhizobium meliloti; putative transcriptional regulator FT protein; length 235 aa; id=25.53; ungapped id=26.2; FT E()=1.6e-11; 235 aa overlap; query 3-235 aa; subject 1-231 FT aa" FT /db_xref="GOA:Q1M4S7" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M4S7" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11894.1" FT /translation="MILKYDEVVRTGIAKQVADNIRSAIMDGRLKIDERLPTEEDLAKS FT FGISRPTVREALKRLAAQNLIRSKRGPAGGNFVKRPDPEGLSKAITGAATLLVGIGAFD FT IEEIITARLETETVCCRLAAANRDESHLAAMEAEIAVQLDPTISDEGFCASDVRFHRAL FT VESTGNGPLKLMMYTVIEAFIPITNMIVFRVRERHHVASLHQEIIHAVRARDDAKATDA FT LARLLAYVRESYAAVLNARAGRDAAQVSA" FT misc_feature 186030..186227 FT /note="Pfam match to entry PF00392.9 GntR, score FT 76.9,E-value 5.3e-20" FT /inference="protein motif:Pfam:PF00392.9" FT misc_feature 186102..186167 FT /note="Predicted helix-turn-helix motif with score FT 1699.000, SD 4.97 at aa 37-58, sequence FT PTEEDLAKSFGISRPTVREALK" FT CDS 186783..187778 FT /transl_table=11 FT /locus_tag="pRL120182" FT /product="putative alcohol dehydrogenase" FT /note="similarity:fasta; SWALL:ADH3_BACST (SWALL:P42328); FT Bacillus stearothermophilus; alcohol dehydrogenase; length FT 339 aa; id=25.69; ungapped id=29.64; E()=3.9e-08; 323 aa FT overlap; query 33-327 aa; subject 27-334 aa" FT /note="similarity:fasta; SWALL:Q6N0V2 (EMBL:BX572608); FT Rhodopseudomonas palustris; zinc-binding dehydrogenases; FT length 328 aa; id=55.04; ungapped id=55.21; E()=1.6e-61; FT 327 aa overlap; query 4-330 aa; subject 3-328 aa" FT /db_xref="GOA:Q1M4S6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1M4S6" FT /inference="similar to sequence:UniProtKB:P42328" FT /inference="similar to sequence:INSDC:BX572608" FT /protein_id="CAK11895.1" FT /translation="MTETFTAMVIDTVDGKPKGAFRQLSIADLPDNDVLVEIAYSTLNY FT KDGLAISGKGRIARRMPMVGGIDLSGTVIESRSLEWKPGDKVVLNGWGLSETEWGAYGR FT YQRVKSEWLIPLPEAFSLQQAMAIGTAGYTAALCVDALEKWGSIKPGEGEVLVTGAAGG FT VGSVAIALLAARGYNVTASTGRPETHDYLAFLGATTFIDRATLAEKGGPLQRERWTGGI FT DSVGSTTLANALSQTVHGCAIACCGLAGGADLPATVLPHILRAVTLIGIDSVIATRQQR FT LSAWARLARDMDKGKLDSMTTVEPMSKLPQLAEDIVAGKIRGRAVIDVNG" FT misc_feature 186828..187769 FT /note="Pfam match to entry PF00107.11 ADH_zinc_N, score FT 128.0, E-value 2.2e-35" FT /inference="protein motif:Pfam:PF00107.11" FT CDS complement(187936..189693) FT /transl_table=11 FT /locus_tag="pRL120183" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q9I485 (EMBL:AE004555); FT Pseudomonas aeruginosa; hypothetical protein; length 580 FT aa; id=52.98; ungapped id=53.83; E()=3.9e-120; 570 aa FT overlap; query 16-582 aa; subject 13-576 aa" FT /db_xref="InterPro:IPR007506" FT /db_xref="UniProtKB/TrEMBL:Q1M4S5" FT /inference="similar to sequence:INSDC:AE004555" FT /protein_id="CAK11896.1" FT /translation="MVNLLDGWIFSGTPYVRGKASGDVVASDLELSFWGGVDPWTGEVI FT DRHHPLSGRSLKDHILAIPGGRGSCSGSGVMLELLLNGKGPKAMLFEREEDILTLGVVI FT AEEVFGQSIPVVTLTPENFRKVVRSAFVEIDGNVVFCSADGLATDAIPAHSQHSGHLFG FT DVELSELDRAYLAGDHGKAAQSAIRIILRMAKLQGAAQLMDVSQVHVDGCIYTGPGSLS FT FAERLRDLGGRVVVPTTLNSISVDHRRWRSQGIDPVLGEPASKLGDVYVEMGARPTFTC FT APYLLETAPRIGEQVAWAESNAVVYANSVLGARTMKYPDFLDICIALTGRAPLAGPHID FT INRKAGLVISVGNIEGIDDSFYPLLGYHIGTLASNLIPVVTGLDQADPTNDDLKAFGAA FT FATVSSAPMFHIVGVTPEAKTLDAVAPAGISIPSIDLRLEELASSWEELNSADEERVDL FT VSLGNPHFSLSEIERLASMCTGRKKHVDVAVVVTCGRATYDKANEAGLIPALEHFGVQF FT VTDTCWCMITDPIIPTLAKTILTNSGKYAHYGPGITGRRFYFGGMAACVAAACSGVHSK FT AAPRWLRPA" FT misc_feature complement(187990..189201) FT /note="Pfam match to entry PF04412.2 DUF521, score 557.1, FT E-value 1.5e-164" FT /inference="protein motif:Pfam:PF04412.2" FT misc_feature complement(189274..189666) FT /note="Pfam match to entry PF01989.6 DUF126, score FT 70.4,E-value 4.8e-18" FT /inference="protein motif:Pfam:PF01989.6" FT CDS complement(189876..190223) FT /transl_table=11 FT /locus_tag="pRL120184" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q92YE5 (EMBL:AE007280); FT Rhizobium meliloti; hypothetical protein; length 140 aa; FT id=82.17; ungapped id=82.17; E()=1.9e-26; 101 aa overlap; FT query 15-115 aa; subject 40-140 aa" FT /db_xref="UniProtKB/TrEMBL:Q1M4S4" FT /inference="similar to sequence:INSDC:AE007280" FT /protein_id="CAK11897.1" FT /translation="MPSRSTKSIFRSTQENLMGTQPPTAAESEAKVALARNKLVLEQAK FT AVGLLGTAKNTRLSGRVPSELIEAAKKRARVTSDTELLELALSRLALEDDFGPRLVGRK FT GRIPTDIDLGI" FT CDS 190618..191802 FT /transl_table=11 FT /locus_tag="pRL120185" FT /product="putative transmembrane transporter" FT /note="similarity:fasta; SWALL:Q7CWE3 (EMBL:AE008185); FT Agrobacterium tumefaciens; agr_c_4938p; length 398 aa; FT id=29.13; ungapped id=30.32; E()=5.8e-27; 381 aa overlap; FT query 9-384 aa; subject 26-396 aa" FT /db_xref="GOA:Q1M4S3" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1M4S3" FT /inference="similar to sequence:INSDC:AE008185" FT /protein_id="CAK11898.1" FT /translation="MKIAPQQRIYVCFFLFAVSLGALLSRMPDLQVALGVNKSELGLTL FT IGAAIGALISLTFSSPLIARLGARTTAFITVLGTSALLSLVPWIGAAPVVFCVLFIEGL FT LAGALEINLNVEIDRIEAQLGRGVMNRAHGFWSLGFFVTALVSSVVRQAGISMELHLAA FT TFVTVLVIGIWAISGMRNAPARIALHEGKAPLVALPTWGLMPLCVIGIAAFLVEGAGID FT WSAIYMRDVFSVEPFIGGLGLTLFTFCMALARLFVDPLVDRFGARAVTTMLLVLSAIGV FT CAVSGAPHPYVALAGFALMGAGCSAVYPLAVSAAAQRTDRAAYLNVAALGQMSFVVFFL FT APPLLGFIAEHAGIRTSYLVCLPLIIYALFSAKALATRRAAGGGSAATARSVNG" FT misc_feature 190642..191667 FT /note="Pfam match to entry PF07690.1 MFS_1, score FT 66.7,E-value 6.3e-17" FT /inference="protein motif:Pfam:PF07690.1" FT misc_feature order(190642..190695,190738..190806,190825..190878, FT 190888..190956,191014..191082,191092..191160, FT 191197..191265,191308..191376,191410..191478, FT 191491..191559,191596..191664,191677..191730) FT /locus_tag="pRL120185" FT /note="12 probable transmembrane helices predicted at aa FT 9-26, 41-63, 70-87, 91-113,133-155, 159-181, 194-216, FT 231-253, 265-287, 292-314,327-349 and 354-371" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(191960..192499) FT /transl_table=11 FT /locus_tag="pRL120186" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q8A858 (EMBL:AE016931); FT Bacteroides thetaiotaomicron; putative NADH FT dehydrogenase/NAD; length 178 aa; id=29.28; ungapped FT id=31.54; E()=2.2e-08; 181 aa overlap; query 1-174 aa; FT subject 1-175 aa" FT /db_xref="GOA:Q1M4S2" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q1M4S2" FT /inference="similar to sequence:INSDC:AE016931" FT /protein_id="CAK11899.1" FT /translation="MDFVSFMEARHSVRQYDSNRTVAFEKIERAIRAAQQSPSSCNRQT FT CRVYAFTEKPSIARVLAHHDGNRGFGELLGGVFVVTVDLSHWNTVGERNQGWVDGGMFA FT MTLALGLHAEGLGACMLNWSAAREQDIKMRTCVGIPDNEIIITLIGFGHMRDEFRVPVS FT ARKPIDMVLTHEPSLR" FT misc_feature complement(192041..192481) FT /note="Pfam match to entry PF00881.10 Nitroreductase, score FT 14.3, E-value 4.3e-07" FT /inference="protein motif:Pfam:PF00881.10" FT CDS complement(192710..193939) FT /transl_table=11 FT /locus_tag="pRL120187" FT /product="putative amine oxidase family protein" FT /note="similarity:fasta; SWALL:PUO_MICRU (SWALL:P40974); FT Micrococcus rubens; putrescine oxidase; puO; length 478 aa; FT id=23.32; ungapped id=27.83; E()=0.00029; 463 aa overlap; FT query 1-399 aa; subject 13-464 aa" FT /note="similarity:fasta; SWALL:Q6NCR0 (EMBL:BX572594); FT Rhodopseudomonas palustris; NAD binding site:amine oxidase; FT length 422 aa; id=44.8; ungapped id=45.82; E()=3e-55; 404 FT aa overlap; query 4-402 aa; subject 11-410 aa" FT /db_xref="GOA:Q1M4S1" FT /db_xref="InterPro:IPR002937" FT /db_xref="UniProtKB/TrEMBL:Q1M4S1" FT /inference="similar to sequence:UniProtKB:P40974" FT /inference="similar to sequence:INSDC:BX572594" FT /protein_id="CAK11900.1" FT /translation="MDYEVAIVGAGAAGIAAAKGLADAGRSVIILEASNRVGGRAWTIE FT LAGMPLDMGCGWLHSAERNPLVAIGRGAGFNIERGPTAWQSQWRDLGFTQDERAAAAAA FT WTALEERMRTNPPASDRASDALEPGGKWNAYCQSLSGYMNGAPLDRLSVADFLAYDNAA FT TDANWRVQEGYGSLISATVPNVALRLSTPVRRVTLTANGVQLETDRGPVTSGAAIITAS FT TTVLARGTIIFASEADDHLHAASQLPLGLADKLFLELHGNHGLEPETHLLGDPQNAETG FT SYYIRPLGRPIIEGFFGGNGAVVIERAGLLDAFAFALDQLSSLLGNNIRRHLRPLAASS FT WCRTDWIGGSYSHALPGHASARAVLARPVGDRLFFAGEATHQSDFSTAHGAWESGLRAA FT DQAAAVLTRS" FT misc_feature complement(192731..193906) FT /note="Pfam match to entry PF01593.9 Amino_oxidase, score FT 125.8, E-value 1e-34" FT /inference="protein motif:Pfam:PF01593.9" FT CDS 194028..195569 FT /transl_table=11 FT /locus_tag="pRL120188" FT /product="putative transmembrane Na+/H+ antiporter" FT /note="similarity:fasta; SWALL:Q98H22 (EMBL:AP003001); FT Rhizobium loti; na+/h+ antiporter; length 517 aa; id=41.76; FT ungapped id=43.03; E()=4e-63; 510 aa overlap; query 1-501 FT aa; subject 1-504 aa" FT /db_xref="GOA:Q1M4S0" FT /db_xref="InterPro:IPR018422" FT /db_xref="UniProtKB/TrEMBL:Q1M4S0" FT /inference="similar to sequence:INSDC:AP003001" FT /protein_id="CAK11901.1" FT /translation="MTFFETLVALLAVAILLLQVTRRMRLPYPGILAAAGVAVAMLPGA FT PTIPIDPPTALALFIAPVLVDSAYDFPVGAARRMLLPLFFYAVVAVLVTTGVVVSISML FT TVGLPIAVAVTLGAIVSPPDAAAATAVLSNLPVARRVDALLKGESLFNDATALLLFGAA FT LTVQARGGLDAGTALQVGFAAPGGILFGIAFGFFVSRLRPITENTVGGTLLQFVYAFST FT WLIAEHLHLSAVLATVASAMTLATLSSVKDSPRMRVHSFAVWTTVVFLLNVVAFLLMGL FT QARRILEAMSAEELQRAMGFAAIVVVGVILARMAMAFLLHAVVASRHRRGGELAPFTSG FT ETLLVGWAGMRGLVTLATAFALPADFPERDLVVLTAFTVVLATLVIQGATLAPMIHFLK FT LGRQAEVRDELKAARRSLAEAAFLRLEKEDGTEAEAIRTICKDHWTASTDANETSPLDR FT RRHLTIAAVLAQRQRLEELRDADQIGATQYLELQEDLDWKQLSVDSDEDRRITES" FT sig_peptide 194028..194102 FT /locus_tag="pRL120188" FT /note="Signal peptide predicted for pRL120188 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.750) with cleavage FT site probability 0.237 between residues 25 and 26" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature 194034..195218 FT /note="Pfam match to entry PF00999.9 Na_H_Exchanger, score FT 144.4, E-value 2.5e-40" FT /inference="protein motif:Pfam:PF00999.9" FT misc_feature order(194037..194090,194109..194177,194187..194255, FT 194274..194342,194355..194423,194457..194525, FT 194553..194621,194682..194750,194808..194867, FT 194925..194993,195051..195119,195138..195206) FT /locus_tag="pRL120188" FT /note="12 probable transmembrane helices predicted at aa FT 4-21, 28-50, 54-76, 83-105,110-132, 144-166, 176-198, FT 219-241, 261-280, 300-322,342-364 and 371-393" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(195660..196718) FT /transl_table=11 FT /locus_tag="pRL120189" FT /product="putative transcriptional regulator" FT /note="similarity:fasta; SWALL:RBTR_KLEAE (SWALL:P07760); FT Klebsiella aerogenes; ribitol operon repressor; rbtR; FT length 270 aa; id=46.66; ungapped id=47.39; E()=1.2e-30; FT 195 aa overlap; query 7-200 aa; subject 2-194 aa" FT /note="similarity:fasta; SWALL:Q92W80 (EMBL:AL591985); FT Rhizobium meliloti; putative catabolite repressor protein; FT length 356 aa; id=73.29; ungapped id=73.29; E()=1.4e-102; FT 352 aa overlap; query 1-352 aa; subject 1-352 aa" FT /db_xref="GOA:Q1M4R9" FT /db_xref="InterPro:IPR000843" FT /db_xref="UniProtKB/TrEMBL:Q1M4R9" FT /inference="similar to sequence:UniProtKB:P07760" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11902.1" FT /translation="MTDIGKKKATIYDLSMLSGASPSTVSAVLNGSWRKRRIKEATAQL FT IQKLANEHGYTANLQARGLRSSRSGLVGLLLPVHDNRYFSSMAQSFEAQVRSRGQCPLV FT VSACRDPEEERKVVATLISYSIDELFIAGATDPDGVHKVCEKAGLKHVNIDLPGTLAPS FT IISDNHEGARMLTQAIIERAQEDGPLSPDDLYLFGGRNDHASHERIRGFRDVKRALLGA FT DPDVCIQPTGYSPAMTARAFEAFYEGHGKLPRAFFVNSSINLEGLMRFLALHPHETFAD FT IIVGCYDYDPFGSFLPFPVFMIRQDSETMITKGFAILDADRRPPITHLVRPTLVPPRTA FT LTGPLDALKDIE" FT misc_feature complement(195690..196514) FT /note="Pfam match to entry PF00532.8 Peripla_BP_1, score FT -39.0, E-value 0.033" FT /inference="protein motif:Pfam:PF00532.8" FT misc_feature complement(196629..196694) FT /note="Predicted helix-turn-helix motif with score FT 1369.000, SD 3.85 at aa 34-55, sequence FT ATIYDLSMLSGASPSTVSAVLN" FT CDS 196964..197947 FT /transl_table=11 FT /locus_tag="pRL120191" FT /product="putative substrate binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q92W79 (EMBL:AL591985); FT Rhizobium meliloti; putative ABC transporter periplasmic FT sugar-binding protein; length 330 aa; id=84.49; ungapped FT id=85.01; E()=1.7e-97; 329 aa overlap; query 1-327 aa; FT subject 2-330 aa" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q1M4R8" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11903.1" FT /translation="MRSLIVAAFAASLSLAGAVVAFAQDAPKVGVVVKIGGIPWFNAME FT AGIKEQGKKLGVDAFMIGPTSADPALQVRAIEDLIAQGVKVIGVVPNDAKVLEPVLTKA FT QAAGIKVITHESPSQKGADWNFELASATGFGEAHGKLLAEKMGGKGEYAVFVGSLTVPL FT HNAWADAAIAYIKANYPDMKLVGERYGVAEDVDKSRSTALDLIAAHPDLTGFLAFGSQG FT PIGAGRAIEERRKTGKIFVLGPFSPGQGQKLIKSDAISGGFMWNPKQAGEVFVTLADRL FT IKGESVKEGDDIPGLGVIKPVGNDIIVDQLLPINKDTVDDLAAMGL" FT sig_peptide 196964..197032 FT /locus_tag="pRL120191" FT /note="Signal peptide predicted for pRL120191 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.995 between residues 23 and 24" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS 198074..199588 FT /transl_table=11 FT /locus_tag="pRL120192" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q92W78 (EMBL:AL591985); FT Rhizobium meliloti; putative sugar ABC transporter FT ATP-binding protein; length 509 aa; id=77.33; ungapped FT id=77.95; E()=1.1e-135; 503 aa overlap; query 2-504 aa; FT subject 11-509 aa" FT /db_xref="GOA:Q1M4R7" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M4R7" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11904.1" FT /translation="MSTATDDGVKAQPLLSLRGINMTFGGVKALKNVSFEVLPGEVHCL FT AGENGSGKSTLIKVISGVYRPADGAEIVFDGETISHMTPAMAQSRGIQIIWQDLALFPE FT MSVAENIAFQTLSGSRPRFVNYAAIRAIAEEALVRLGVTLDVDRPLKDFAIAQRQIVAI FT ARALVGEARIVFMDEPTASLTQSETDHLLAIVRTLSASGVAVVFVSHRLAEVLDISSRI FT TVLRDGALVGVYPVEGMTQSDITELMTGRTFDQNVRARNVSQNPVLLSVGKLSRPGEFE FT DISFDLRRGETLGVTGLLGSGRTELALTLFGMRRPATGTIVLEGRAMRFASNREAIASG FT VAYLSEDRLSLGLNQPQSIADNLVMASLNRILGGRLISPEKKRSLVARWIADLGIRIGK FT QDDAISTLSGGNQQRVAIAKWLATDPKVLILDAPTVGVDVGARAGIFEIVARLAEAGLA FT IILISDEVPEVYFNADRIIHMEKGRIAGWHDPRATTLKDLEAAVYA" FT misc_feature 198191..198757 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 170.1, E-value 4.8e-48" FT /inference="protein motif:Pfam:PF00005.11" FT misc_feature 198941..199519 FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 103.9, E-value 4e-28" FT /inference="protein motif:Pfam:PF00005.11" FT CDS 199581..200609 FT /transl_table=11 FT /locus_tag="pRL120193" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q92W77 (EMBL:AL591985); FT Rhizobium meliloti; putative sugar ABC transporter permease FT protein; length 333 aa; id=82.28; ungapped id=82.53; FT E()=1.5e-100; 333 aa overlap; query 1-333 aa; subject 1-332 FT aa" FT /db_xref="GOA:Q1M4R6" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q1M4R6" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11905.1" FT /translation="MRKLFLSHTTEFVLFAVIIAMSIVLAFATDRFFTLGNGFDLLNIS FT AVNIIFAVGLLVVLISGGIDISFAVAASIVQYVTALALERIGGGGWLSGLLIAGGIGIV FT LGVINAFLIHRFRIISIVATIATFNVYFGLLMFFTKGVSIYDLPDWLTSRVIIYEREMA FT DGSWAEITLPVVVMVVCTLATWLFITRTTTGRQLYAFGDNPEGARRFGINIGAMQFIAF FT GWLGLMAGIAGLMQAHYAQEVVPNALYGRELDVLAAVVLGGARLGGGKGSVLGCVLGVL FT LVSITQNGLNLMGVSPFAFKMIVGAIILVAITLSSARIGNLVPVFATRKSTGGRPADRG FT ES" FT sig_peptide 199581..199664 FT /locus_tag="pRL120193" FT /note="Signal peptide predicted for pRL120193 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.995) with cleavage FT site probability 0.625 between residues 28 and 29" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature order(199614..199667,199695..199763,199776..199829, FT 199839..199907,199926..199994,200079..200147, FT 200208..200276,200367..200435,200454..200522) FT /locus_tag="pRL120193" FT /note="9 probable transmembrane helices predicted at aa FT 12-29, 39-61, 66-83, 87-109,116-138, 167-189, 210-232, FT 263-285 and 292-314" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 199689..200516 FT /note="Pfam match to entry PF02653.5 BPD_transp_2, score FT 159.9, E-value 5.5e-45" FT /inference="protein motif:Pfam:PF02653.5" FT CDS 200609..201595 FT /transl_table=11 FT /locus_tag="pRL120194" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q92W76 (EMBL:AL591985); FT Rhizobium meliloti; putative sugar ABC transporter permease FT protein; length 332 aa; id=76.29; ungapped id=76.52; FT E()=1.2e-86; 329 aa overlap; query 1-328 aa; subject 1-329 FT aa" FT /db_xref="GOA:Q1M4R5" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q1M4R5" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11906.1" FT /translation="MNALAARFNAIFGADMAGPLAALAAVLVVFGFASPHFLTGATFGS FT VAFQLPELGVLTLAMLMPILTGGLNLAITFTANIAGLTLAWTLQANGGIEAGPGAFLLG FT SALALAVGAASGLVMGLVIAFTRAHPILVSLSMMIFLRGLGEFLTRGGDISGFPAFIAP FT IGHGSILGIPVPLLILIACVIASHILLSRSKLGFSTYMIGSNIESARYSGINTRKVLVL FT VYMLSGVMAAVAGIIMLARFNSVRVGHGESYLLITVLACFLGGINPFGGFGRVLPVFVA FT LIVLQLLSSGLNLLGANQHLTTAVWGILLIVVMVLRWLSAKFIKIVK" FT sig_peptide 200609..200680 FT /locus_tag="pRL120194" FT /note="Signal peptide predicted for pRL120194 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.935) with cleavage FT site probability 0.729 between residues 24 and 25" FT /inference="protein motif:SignalP-HMM:2.0" FT misc_feature order(200639..200707,200717..200785,200804..200872, FT 200915..200983,201002..201070,201113..201181, FT 201266..201334,201362..201418,201431..201499, FT 201512..201571) FT /locus_tag="pRL120194" FT /note="10 probable transmembrane helices predicted at aa FT 11-33, 37-59, 66-88, 103-125,132-154, 169-191, 220-242, FT 252-270, 275-297 and 302-321" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 200732..201550 FT /note="Pfam match to entry PF02653.5 BPD_transp_2, score FT 159.4, E-value 7.7e-45" FT /inference="protein motif:Pfam:PF02653.5" FT CDS 201607..202455 FT /transl_table=11 FT /locus_tag="pRL120195" FT /product="putative-epimerase" FT /note="similarity:fasta; SWALL:DT3E_PSECI (SWALL:O50580); FT Pseudomonas cichorii; D-tagatose 3-epimerase; length 290 FT aa; id=29.39; ungapped id=32.58; E()=8.2e-18; 296 aa FT overlap; query 1-275 aa; subject 1-288 aa" FT /note="similarity:fasta; SWALL:Q92W75 (EMBL:AL591985); FT Rhizobium meliloti; hypothetical protein smb20488; length FT 282 aa; id=79.43; ungapped id=79.43; E()=7e-87; 282 aa FT overlap; query 1-282 aa; subject 1-282 aa" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:Q1M4R4" FT /inference="similar to sequence:UniProtKB:O50580" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11907.1" FT /translation="MEGFGVHTSMWTMNWDRAGAEKAIAGAVHYKMDFIEIALLNAPAV FT DAKHTCDLLEKNKLRAVCSLGLPEHAWASVRPDAAIEHLRVAIEKTAEMNAEALSGVIF FT GGIGERTGVPPTQGEYDNIAKVLDVAAKHAKKYGIQLGVEAVNRYENHLINSAQQAVDM FT VERVGADNIFVHLDTYHMNIEEKGAANGILIARDHLKYIHLSESDRGTPGYGNIPWDAI FT YAALAAIGFKGGLAMESFINMPPEVAYGLAVWRPVARDMEEVMDKGLPFLRNKAEQYGL FT I" FT CDS 202765..203829 FT /transl_table=11 FT /locus_tag="pRL120196" FT /product="putative fructose-bisphosphate aldolase" FT /note="similarity:fasta; SWALL:ALF2_RHOSH (SWALL:P29271); FT Rhodobacter sphaeroides; fructose-bisphosphate aldolase ii; FT cfxB; length 354 aa; id=74.92; ungapped id=74.92; FT E()=3.5e-97; 351 aa overlap; query 1-351 aa; subject 1-351 FT aa" FT /note="similarity:fasta; SWALL:Q8FVH0 (EMBL:AE014581); FT Brucella suis; fructose-bisphosphate aldolase, class ii; FT fbaA; length 354 aa; id=87.85; ungapped id=87.85; FT E()=5.5e-118; 354 aa overlap; query 1-354 aa; subject 1-354 FT aa" FT /db_xref="GOA:Q1M4R3" FT /db_xref="InterPro:IPR006412" FT /db_xref="UniProtKB/TrEMBL:Q1M4R3" FT /inference="similar to sequence:UniProtKB:P29271" FT /inference="similar to sequence:INSDC:AE014581" FT /protein_id="CAK11908.1" FT /translation="MARITLRQLLDHAAEEGYGVPAFNINNMEQALAIMEAADACHAPV FT IMQASRGARAYAHDIMLKHMMDAVVEIYPHIPVCVHLDHGNDPSNCMTAIQAGFTSVMM FT DGSLKADAKTPADWAYNVGVTKMVTDMAHFGGISVEGELGVLGSLETGMGEAEDGHGAE FT GKLSHDQLLTDPDEAVKFVRETKVDALAIAMGTSHGAYKFTRKPDGSVLAMNVIEEIHR FT KLPNTHLVMHGSSSVPIELQEIINKYGGQMKPTWGVPVEEIQRGIKNGVRKVNIDTDGR FT MAMTGQIRRVLQEDPSEFDPRKYLKPAMTALTKLCKERFEQFGTAGMAGRITPLPVSEM FT AKRYKSGSLDPAFS" FT misc_feature 202771..203751 FT /note="Pfam match to entry PF01116.8 F_bP_aldolase, score FT 583.7, E-value 1.4e-172" FT /inference="protein motif:Pfam:PF01116.8" FT CDS complement(203836..205587) FT /transl_table=11 FT /locus_tag="pRL120197" FT /product="putative glycerol-3-phosphate dehydrogenase" FT /note="similarity:fasta; SWALL:GLPD_SYNY3 (SWALL:P74257); FT Synechocystis sp.; glycerol-3-phosphate dehydrogenase; FT glpD; length 553 aa; id=31.51; ungapped id=35.37; FT E()=1.2e-28; 568 aa overlap; query 11-551 aa; subject 4-536 FT aa" FT /note="similarity:fasta; SWALL:Q8U953 (EMBL:AE009318); FT Agrobacterium tumefaciens; glycerol-3-phosphate FT dehydrogenase; glpD; length 574 aa; id=43.03; ungapped FT id=44.2; E()=2.7e-83; 567 aa overlap; query 2-562 aa; FT subject 3-560 aa" FT /db_xref="GOA:Q1M4R2" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q1M4R2" FT /inference="similar to sequence:UniProtKB:P74257" FT /inference="similar to sequence:INSDC:AE009318" FT /protein_id="CAK11909.1" FT /translation="MSMTPDLQQRFSNLGENDIDVLIIGAGINGAGLFRDLSLQGVNCL FT IVDKADFGSGTSAAPSRLIHGGLKYLETGEFGLVAQSTLERNLLLKNAPHCVEPLPTFI FT PVFSWTRGIWAAIRTLFGSKTAPRSRGAVLIKIGLRLYDFFGSRDQVMPRHRLILKKQA FT RREMPHITPAIVAGGIYYDAKISRPERLVYELVNDGLDTNAGSLAANFATLAAVSEGRL FT TFRQPDGREFSVAPKLVVNAAGPWIDQVNTLLGAPSRLIGGTKGSHILLDHPELVRSLN FT GHMIYFEADDGRICLVYDYLGLALVGSTDIPAGDPDNVSCEEPETEYFLESIRSLLPTL FT RFDRDQIVYSYSGIRPLPASDATAPGLISRDHSAPVKEPEDGRPFPVVSLVGGKWTTFR FT GFAEEVADTVLSRLQRSRSQSTRYLAIGGGKAFPADAEQRNAWISDTAARGGVAAERAG FT ELLGRYGTTAVALLSSPSGYSDEQRLTGAPRYSLREIDWVARNELVIHLSDIVMRRTTL FT AIEGRLTLEGLREIAGVAEAALGWDGERTASEIQDVVSQLSRFHGQALTGKPAAAEPEK FT APRPALG" FT misc_feature complement(204370..205533) FT /note="Pfam match to entry PF01266.8 DAO, score FT 127.0,E-value 4.4e-35" FT /inference="protein motif:Pfam:PF01266.8" FT CDS complement(205625..207154) FT /transl_table=11 FT /locus_tag="pRL120198" FT /product="putative L-xylulose kinase" FT /note="similarity:fasta; SWALL:LYXK_ECOLI (SWALL:P37677); FT Escherichia coli; cryptic L-xylulose kinase; lyX; length FT 498 aa; id=32.93; ungapped id=34.65; E()=1e-47; 504 aa FT overlap; query 5-499 aa; subject 6-493 aa" FT /note="similarity:fasta; SWALL:Q92W66 (EMBL:AL591985); FT Rhizobium meliloti; putative L-xylulose kinase protein; FT lyX; length 509 aa; id=40.07; ungapped id=41.14; FT E()=3.9e-64; 504 aa overlap; query 4-502 aa; subject 5-500 FT aa" FT /db_xref="GOA:Q1M4R1" FT /db_xref="InterPro:IPR018485" FT /db_xref="UniProtKB/TrEMBL:Q1M4R1" FT /inference="similar to sequence:UniProtKB:P37677" FT /inference="similar to sequence:INSDC:AL591985" FT /protein_id="CAK11910.1" FT /translation="MPTLLGIDSGLTVTKAVIFDIDGTPLAAARRRVTQFIPKARHIER FT DMDELWSATADAIREAISLSGRPASDIEGIAATAHGDGIYLLDHAQQPLGRAILSLDSR FT AGAIVDRWTQSDVADLAIELTGQIPHVSAPSALLAWIREMEPERYKRIGHFCSCKDWLR FT FCLTGIIGTDRTEASTSFTNVKTQNYSEDALQLFGLQDLVHALPPASRSDQIVGRVTRE FT AAQLTGLAEGTPVVAGLHDVTASALGAGGYAKGVVAVIAGTYSINETLSSEPRVDRRWF FT CRNGIAPGIWNSMSISPASTANYDWFLATLCAAERTNGEVRGNSIHALLAPEIDAAFER FT PSTALFHPYLFGSPYGAAASAGFFGLGGWHDRGDMLRAVLEGIAFNHRIHVDALRDGFA FT FDQARLAGGVSRNPAVVQMFADVLGMPVTVTETDEAAAWGAALCAGSGAGIFADPQSDP FT RDTASIAKTCRPDAARSADYEKRYQVFRDIADAMISLWPRIAALAPEQSAN" FT misc_feature complement(205718..206398) FT /note="Pfam match to entry PF02782.4 FGGY_C, score FT 61.8,E-value 1.9e-15" FT /inference="protein motif:Pfam:PF02782.4" FT misc_feature complement(206411..207148) FT /note="Pfam match to entry PF00370.9 FGGY_N, score 220.6, FT E-value 2.9e-63" FT /inference="protein motif:Pfam:PF00370.9" FT CDS complement(207191..208033) FT /transl_table=11 FT /locus_tag="pRL120199" FT /product="putative DeoR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q8YCU2 (EMBL:AE009680); FT Brucella melitensis; transcriptional regulator, deor FT family; length 282 aa; id=73.38; ungapped id=73.38; FT E()=1.3e-71; 263 aa overlap; query 14-276 aa; subject 9-271 FT aa" FT /db_xref="GOA:Q1M4R0" FT /db_xref="InterPro:IPR001034" FT /db_xref="UniProtKB/TrEMBL:Q1M4R0" FT /inference="similar to sequence:INSDC:AE009680" FT /protein_id="CAK11911.1" FT /translation="MTQKTSRDDDLLDQLTSDSRQTRQIARRRMIAEAVMGEGSMRIED FT LTDRFGISLMTAHRDVDELVSRGLFRKTRGIVTAAATNLIESSDVYRSNRQSAEKKLIA FT EAAMQFVEPGQAIFFDDSTTVLQMAAHLPSKAPVTAITNSLTLMNALTGLHDVTLLALG FT GQYYNWCNAFMGRMTINEINALRADVAFISMSAISDGTVLHQSPETVDTKRAMFDCSVK FT RILLADHTKFERRALHSFAALDEFDVVIVDDKTQPVHIDRMRSRDINVVIARGAGGRS" FT misc_feature complement(207278..207955) FT /note="Pfam match to entry PF00455.10 DeoR, score FT 205.2,E-value 1.3e-58" FT /inference="protein motif:Pfam:PF00455.10" FT misc_feature complement(207848..207913) FT /note="Predicted helix-turn-helix motif with score FT 1053.000, SD 2.77 at aa 41-62, sequence FT MRIEDLTDRFGISLMTAHRDVD" FT CDS complement(208183..209130) FT /transl_table=11 FT /locus_tag="pRL120200" FT /product="putative substrate binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q8FVI3 (EMBL:AE014580); FT Brucella suis; ribose ABC transporter, periplasmic FT D-ribose-binding protein; rbsb-2; length 315 aa; id=84.44; FT ungapped id=84.44; E()=6.1e-90; 315 aa overlap; query 1-315 FT aa; subject 1-315 aa" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q9" FT /inference="similar to sequence:INSDC:AE014580" FT /protein_id="CAK11912.1" FT /translation="MFKKGMRILLAAAAVAPLLASSAWAAGMMTIIVNDPSNPYWLTEG FT NVAKATAEKLGYTASVNAHKGDTNTESNLIDTAITNKSVAIILDPANADGSVGAVKKAV FT AAGIPVILVNAEINQEGLAKAQLVSNNAQGAALGAQQWVEAIGDKGNYAELFGAPSDNN FT AATRSNGYETVLSQYPDLKKVAKEVANWDRTQGHNKMQSMLQANPDIVGVISGNDEMAL FT GAIAALKEAGKLANVKVGGFDGSPDAVAAIKAGELQYTVLQPVAVFSEEAVKQADNLIK FT TGNTGAKSEKQLFDCLLITKDNIDKYTGPFVLAQ" FT misc_feature complement(208210..209055) FT /note="Pfam match to entry PF00532.8 Peripla_BP_1, score FT 1.1, E-value 0.0002" FT /inference="protein motif:Pfam:PF00532.8" FT misc_feature complement(209044..209112) FT /locus_tag="pRL120200" FT /note="1 probable transmembrane helix predicted at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(209056..209130) FT /locus_tag="pRL120200" FT /note="Signal peptide predicted for pRL120200 by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.997 between residues 25 and 26" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(209242..210294) FT /transl_table=11 FT /locus_tag="pRL120201" FT /product="putative permease component of ABC transporter" FT /note="similarity:fasta; SWALL:Q8YCU5 (EMBL:AE009680); FT Brucella melitensis; ribose transport system permease FT protein rbsc; length 346 aa; id=85.26; ungapped id=85.26; FT E()=6e-106; 346 aa overlap; query 1-346 aa; subject 1-346 FT aa" FT /db_xref="GOA:Q1M4Q8" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q8" FT /inference="similar to sequence:INSDC:AE009680" FT /protein_id="CAK11913.1" FT /translation="MSVTNVTEKKSVSSGPKRNTNIVRLILEGRAFFALIVIIAVFSFL FT SPYYFTLNNFLIMASHVAIFGILAIGMLLVILNGGIDLSVGSTLGLAGCIAGFLMQGVT FT LTYFGVILYPPVWAVVVITCALGALVGAVNGVLIAYLKVPAFVASLGVLYVARGIALLM FT TNGLTYNNLGGRPELGNTGFDWLGFNRLAGIPIGVIVLAVLAIICGIVLSRTAFGRWLY FT ASGGNERAADLSGVPVKRVKIIVYVLSGVCAAIAGLVLSSQLTSAGPTAGTTYELTAIA FT AVVIGGAALTGGRGTVRGTMLGAFVIGFLSDGLVIIGVSAYWQTVFTGAVIVLAVLMNS FT IQYGRRVKSS" FT misc_feature complement(join(209266..209319,209332..209400, FT 209419..209487,209500..209568,209656..209724, FT 209794..209862,209881..209949,209962..210030, FT 210064..210132,210160..210219)) FT /locus_tag="pRL120201" FT /note="10 probable transmembrane helices predicted at aa FT 26-45, 55-77, 89-111, 116-138,145-167, 191-213, 243-265, FT 270-292, 299-321 and 326-343" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(209287..210135) FT /note="Pfam match to entry PF02653.5 BPD_transp_2, score FT 252.1, E-value 9.3e-73" FT /inference="protein motif:Pfam:PF02653.5" FT CDS complement(210316..211860) FT /transl_table=11 FT /locus_tag="pRL120202" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="similarity:fasta; SWALL:Q8FVI1 (EMBL:AE014580); FT Brucella suis; ribose ABC transporter, ATP-binding protein; FT rbsa-3; length 514 aa; id=79.57; ungapped id=79.57; FT E()=5.1e-144; 514 aa overlap; query 1-514 aa; subject 1-514 FT aa" FT /db_xref="GOA:Q1M4Q7" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q7" FT /inference="similar to sequence:INSDC:AE014580" FT /protein_id="CAK11914.1" FT /translation="MNRPQRSNGAKGEVVLAARNIAKSYGNVHALKGVNFDIHRGQVTT FT LFGENGAGKSTLMKILSGVVQPSSGEIILDGSPISFSSSTHARECGISIIHQELSLAPN FT LSVRDNIFMGREIIKGGVVDFAEEARQTRALMEELEEDIDPLTRVEDLRLGQQQIVEIA FT RALSVNSRILIMDEPTSALSATEVEVLFKVIHDLTSRGVSIVYISHHLEEALQITNHAV FT VLRDGNMTAYAERKDIDLEWIVRNMVGENFDLGSPPEGHPFGNVSLSIENLSVPGPSGA FT AYNAVDRLSLKVRAGEIVCIYGLMGAGRTELLECVAGRLRASGGQVLLEGQDVSGLSIA FT GRIASGLVLVPEDRQRDGLVQTMTVGSNLSLASIRAFTKGFFTSGHRERDLVNDAIRRV FT HVKTDGGAASIGSLSGGNQQKVVIGKMLATQPKVILLDEPSRGIDIGAKAEVFKLLAER FT AKQGLAVIYSTSEVNECLSIAHRIIVMHRGRISAEFGSDVTKEKIMAASGEAVVAH" FT misc_feature complement(210397..210975) FT /note="Pfam match to entry PF00005.11 ABC_tran, score 94.9, FT E-value 2e-25" FT /inference="protein motif:Pfam:PF00005.11" FT misc_feature complement(211180..211740) FT /note="Pfam match to entry PF00005.11 ABC_tran, score FT 191.5, E-value 1.7e-54" FT /inference="protein motif:Pfam:PF00005.11" FT CDS complement(211857..212513) FT /transl_table=11 FT /locus_tag="pRL120203" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q8FVI0 (EMBL:AE014580); FT Brucella suis; hypothetical protein bra0861; length 218 aa; FT id=57.07; ungapped id=57.6; E()=4.2e-43; 219 aa overlap; FT query 1-218 aa; subject 1-218 aa" FT /db_xref="InterPro:IPR014582" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q6" FT /inference="similar to sequence:INSDC:AE014580" FT /protein_id="CAK11915.1" FT /translation="MSTSPDYPASKPSSGNRGLLVSAALAVIVVAAIAFDTTVVRIGSE FT NDVRQQAFSPETFGAEQFPKIKANVEERAIAAADLAAAIAADKKAAAEKYGTATSTGPV FT IPVTLTGVFGARKSNTNEMKIDGLPPETVVRVQTGPAVNGTDLRDATGTIEFGQFTNQI FT QYQDAGSAINNEMKKAVFAGLDADALDGKQATVVGVFKLINPKNWLVTPVKVELK" FT misc_feature complement(212394..212462) FT /locus_tag="pRL120203" FT /note="1 probable transmembrane helix predicted at aa FT 56-78" FT /inference="protein motif:TMHMM:2.0" FT CDS 213245..214846 FT /transl_table=11 FT /gene="eryA" FT /locus_tag="pRL120204" FT /product="putative eryithritol kinase" FT /note="similarity:fasta; SWALL:Q9ZB32 (EMBL:U57100); FT Brucella abortus; erythritol kinase; eryA; length 520 aa; FT id=75.92; ungapped id=75.92; E()=5.9e-152; 515 aa overlap; FT query 9-523 aa; subject 3-517 aa" FT /db_xref="GOA:Q1M4Q5" FT /db_xref="InterPro:IPR018485" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q5" FT /inference="similar to sequence:INSDC:U57100" FT /protein_id="CAK11916.1" FT /translation="MLGWRDRPAMTSTQKIIIGIDAGTSVIKAVAFDLSGRQIATASVR FT NRYATGDDGSATQSLDQTWLDCASALRGLGEKVPDLASRTAAIAVTGQGDGTWLVGRAN FT RPVADAWLWLDARAAPTVTSLAGGTQNRARFETTGTGLNTCQQGAQLAHMDRFTPDLLD FT RAETALHCKDWLYLNLTGVRATDPSEASFTFGNFRTRQYDAVVIDALGLEHRRGLLPEI FT IDGSEISHPLTSEAAKACGLLAGTPVCLGYVDMVMTALGAGVRSGARNAACSTIGSTGV FT HLRAKAVADVQLNREGTGYVIALPIPGIVTQVQTNMGATINIDWILNVAAYLMAEAGKP FT ASHADLIARIDGWFAESRPGSVLYHPYISEAGERGPFVNANARAGFTGLSMRHGFPDLL FT RSVIEGLGLATRDCYAAMGAMPEELRVTGGATRSVALRRSLSAAVNAPIRQSRREETGA FT AGVAMMAAVAVGIYSSMDDCIADWVTPLLGDPETPDASEAHRFDRLFSAYTDVRQAMTP FT AWDKLAVAATTSPLGA" FT misc_feature 213290..214027 FT /note="Pfam match to entry PF00370.9 FGGY_N, score 115.0, FT E-value 1.8e-31" FT /inference="protein motif:Pfam:PF00370.9" FT misc_feature 214046..214735 FT /note="Pfam match to entry PF02782.4 FGGY_C, score FT 19.0,E-value 2e-09" FT /inference="protein motif:Pfam:PF02782.4" FT CDS 214879..216390 FT /transl_table=11 FT /gene="eryB" FT /locus_tag="pRL120205" FT /product="putative erythritol phosphate dehydrogenase" FT /note="similarity:fasta; SWALL:Q9ZB31 (EMBL:U57100); FT Brucella abortus; erythritol phosphate dehydrogenase; eryB; FT length 502 aa; id=85.85; ungapped id=85.85; E()=6.3e-179; FT 502 aa overlap; query 1-502 aa; subject 1-502 aa" FT /note="similarity:fasta; SWALL:Q8FVH6 (EMBL:AE014580); FT Brucella suis; erythritol phosphate dehydrogenase; eryB; FT length 502 aa; id=86.85; ungapped id=86.85; E()=3.4e-181; FT 502 aa overlap; query 1-502 aa; subject 1-502 aa" FT /db_xref="GOA:Q1M4Q4" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q4" FT /inference="similar to sequence:INSDC:U57100" FT /inference="similar to sequence:INSDC:AE014580" FT /protein_id="CAK11917.1" FT /translation="MTEPELLDLFVIGGGINGAGIARDAAGRGLKVVLCEKDDLAQGTS FT SRSGKLVHGGLRYLEYYEFRLVREALIEREVLLNAAPHIIWPMRFVLPHSPEDRPAWLV FT RLGLFLYDHLGGRKKLPGTRTLNLLRDPEGTPILDQYTRGFEYSDCWVDDARLVTLNAV FT SAAENGALVLTRSPAVSARRENGGWTVVTKSNATGETRTFRAKCLVNCAGPWVMDIINR FT VAGSNSGRNVRLVKGSHIIVPKFWAGANAYLVQNHDKRVIFINPYEGDKALIGTTDIAY FT EGRAEDVAADETEIEYLLKAVNRYFKEKLRRHDVLHSFSGVRPLFDDGKGNPSAVTRDY FT VFDLDETGGAPLLNVFGGKITTFRELAERGMQRLKHIFPNMGGDWTEKAPLPGGEIPNA FT DYESFANSLRDIYPWMPRKLVHHYGRLYGARARNVVAGATGIEGLGRHFGGQLYEAEAR FT YLVATEWAETADDILYRRTKHYLHLNEAERAAFGEWFASTRLAAA" FT misc_feature 214897..215991 FT /note="Pfam match to entry PF01266.8 DAO, score FT 354.7,E-value 1.2e-103" FT /inference="protein motif:Pfam:PF01266.8" FT CDS 216402..217334 FT /transl_table=11 FT /gene="eryC" FT /locus_tag="pRL120206" FT /product="putative erythrulose 4-phosphate dehydrogenase" FT /note="similarity:fasta; SWALL:Q9ZB30 (EMBL:U57100); FT Brucella abortus; hypothetical protein EryC; eryC; length FT 309 aa; id=86.12; ungapped id=86.4; E()=5.9e-110; 310 aa FT overlap; query 1-310 aa; subject 1-309 aa" FT /note="similarity:fasta; SWALL:Q8YCV0 (EMBL:AE009679); FT Brucella melitensis; D-erythrulose 4-phosphate FT dehydrogenase; length 310 aa; id=86.45; ungapped id=86.45; FT E()=3.7e-111; 310 aa overlap; query 1-310 aa; subject 1-310 FT aa" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q3" FT /inference="similar to sequence:INSDC:U57100" FT /inference="similar to sequence:INSDC:AE009679" FT /protein_id="CAK11918.1" FT /translation="MPLTLSLNTNPLVNRFADPDDLIDTVARDLRIRDLQLTHEFINPS FT WQAPVISRLTRTMSAALKRTGVRVTSGMTGPYGRLNHFGHPDADVRRYYVDWFKTFADI FT TADLGGHSVGTQFAIFTYKDFDDPVRREELIKIAIDCWADVAEHARAAGLSYMFWEPMS FT IGREFGETIGACLSLQQRLTSAGMAIPMWMMADIDHGDITSADPDDYDPYAWARAVPPI FT SPIIHIKQSLMDKGGHRPFTAEFNAKGRIQPAPLLQALAEGGAKDNEICLELSFKEREP FT NDRQVIPQIAESVAFWAPHIDTGVADLNI" FT CDS 217405..218340 FT /transl_table=11 FT /gene="eryD" FT /locus_tag="pRL120207" FT /product="putative erythritol operon transcriptional FT regulator" FT /note="similarity:fasta; SWALL:Q9ZB29 (EMBL:U57100); FT Brucella abortus; ery operon repressor; eryD; length 316 FT aa; id=72.58; ungapped id=72.58; E()=7.6e-79; 310 aa FT overlap; query 1-310 aa; subject 1-310 aa" FT /note="similarity:fasta; SWALL:Q8FVH4 (EMBL:AE014580); FT Brucella suis; erythritol transcriptional regulator; eryD; FT length 316 aa; id=72.58; ungapped id=72.58; E()=7.6e-79; FT 310 aa overlap; query 1-310 aa; subject 1-310 aa" FT /db_xref="GOA:Q1M4Q2" FT /db_xref="InterPro:IPR007324" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q2" FT /inference="similar to sequence:INSDC:U57100" FT /inference="similar to sequence:INSDC:AE014580" FT /protein_id="CAK11919.1" FT /translation="MTDADDTLAVRAAWLHYAGGLTQSDVARRLGVPSVKAHRLIARAV FT ADGVVKVTIDGDIVECVELEMRLSERFGLQYCEVAPDLGEEGLPLRALGHAGAGYLKRE FT IERGDNRVIGLGHGRTLSAAVQYMPRVSAKNLRFVSLLGGLTRNYGANPYDVMHRIAEK FT TGAHAYVMPVPFFANTGEDREVLKAQRAVKEVFDLANNADLKLVGLGTVDAEAQLVLSG FT MVEPGEIDDIANAGGVGEILGHFFDADGHILDTALTARTLSASFPKTKKERLVALAGGQ FT SKVAAIRAILNSRRLFGLITDERTAQALLK" FT misc_feature 217465..217530 FT /note="Predicted helix-turn-helix motif with score FT 1289.000, SD 3.58 at aa 21-42, sequence FT LTQSDVARRLGVPSVKAHRLIA" FT misc_feature 217570..218337 FT /note="Pfam match to entry PF04198.2 Sugar-bind, score FT 360.8, E-value 1.8e-105" FT /inference="protein motif:Pfam:PF04198.2" FT CDS 218441..219217 FT /transl_table=11 FT /locus_tag="pRL120208" FT /product="putative deoR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q9ZB28 (EMBL:U57100); FT Brucella abortus; hypothetical protein; length 254 aa; FT id=73.91; ungapped id=73.91; E()=7.6e-68; 253 aa overlap; FT query 1-253 aa; subject 1-253 aa" FT /db_xref="GOA:Q1M4Q1" FT /db_xref="InterPro:IPR001034" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q1" FT /inference="similar to sequence:INSDC:U57100" FT /protein_id="CAK11920.1" FT /translation="MRREERQQLIVNLLVENKTVDLDDLADRFTVSKMTIHRDLDDLEQ FT AGVLRKVRGGATIDAGTQFESDFRIRERQGNEAKLAMAETALELVEPGMTVMVNDGSMA FT AVLGEMLLQKRPLTLITNNAAIMERLKGETGITLIALGGIYSAKFNAYLGVVTEEALSR FT LRADIAFISTPAVSGGLAYHMDDNVVRAKRAMIASSTRTCLLVNHQRIGHTALHVMADL FT ADFDTVITDSAPDAAVLEEFEQAGITLTIASTQDPT" FT misc_feature 218456..219133 FT /note="Pfam match to entry PF00455.10 DeoR, score FT 160.1,E-value 4.8e-45" FT /inference="protein motif:Pfam:PF00455.10" FT misc_feature 218498..218563 FT /note="Predicted helix-turn-helix motif with score FT 1058.000, SD 2.79 at aa 20-41, sequence FT VDLDDLADRFTVSKMTIHRDLD" FT CDS 219214..219984 FT /transl_table=11 FT /locus_tag="pRL120209" FT /product="putative triosephosphate isomerase" FT /note="similarity:fasta; SWALL:TPIS_BRUAB (SWALL:Q9ZB27); FT Brucella abortus; triosephosphate isomerase; tpiA; length FT 256 aa; id=82.47; ungapped id=82.47; E()=5e-83; 251 aa FT overlap; query 6-256 aa; subject 3-253 aa" FT /db_xref="GOA:Q1M4Q0" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q1M4Q0" FT /inference="similar to sequence:UniProtKB:Q9ZB27" FT /protein_id="CAK11921.1" FT /translation="MTEKPRFWIGTSWKMNKTLTEAEQFARGLEAADGARDPRIHRFVI FT PPFTAVREVKAMLAKTSVKVGAQNMHWADQGAWTGEVSPVMLKDCNLDLVELGHSERRE FT HFGETDETVGLKTEAAVRHGLIPLICIGETLSDRESGKAADILATQVRGALSKLSGAQK FT SAEILLAYEPVWAIGEKGIPATADYADARQSEIIAVAEAVLGRKIPCLYGGSVNPQNCE FT ELISSPHIDGLFIGRSAWNVEGYLDILARCAAKL" FT misc_feature 219226..219975 FT /note="Pfam match to entry PF00121.7 TIM, score FT 200.4,E-value 3.6e-57" FT /inference="protein motif:Pfam:PF00121.7" FT CDS 219996..220451 FT /transl_table=11 FT /locus_tag="pRL120210" FT /product="putative ribose-5-phosphate isomerase" FT /note="similarity:fasta; SWALL:RPIB_ECOLI (SWALL:P37351); FT Escherichia coli; ribose-5-phosphate isomerase b; rpiB; FT length 149 aa; id=37.58; ungapped id=39.43; E()=7.9e-11; FT 149 aa overlap; query 2-147 aa; subject 3-147 aa" FT /note="similarity:fasta; SWALL:Q8FVH1 (EMBL:AE014581); FT Brucella suis; sugar-phosphate isomerases, rpib/laca/lacb FT family; length 151 aa; id=85.9; ungapped id=85.9; FT E()=7.9e-45; 149 aa overlap; query 1-149 aa; subject 1-149 FT aa" FT /db_xref="GOA:Q1M4P9" FT /db_xref="InterPro:IPR003500" FT /db_xref="UniProtKB/TrEMBL:Q1M4P9" FT /inference="similar to sequence:UniProtKB:P37351" FT /inference="similar to sequence:INSDC:AE014581" FT /protein_id="CAK11922.1" FT /translation="MKLAIAGDSAGEGLAKVLADHLKERFDVYEVSRTSAGADPFYANL FT SDRVASGVIDGTYDKAILVCGTGIGVCISANKVPGIRAALTHDTYSAERAALSNNAQII FT TMGARVIGTELAKSIADAFLAQTFDENGRSAGNVKAMDDLDAKYSAR" FT misc_feature 220176..220421 FT /note="Pfam match to entry PF02502.6 LacAB_rpiB, score FT 165.3, E-value 1.3e-46" FT /inference="protein motif:Pfam:PF02502.6" FT CDS <220511..220720 FT /transl_table=11 FT /locus_tag="pRL120211" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q1M4P8" FT /protein_id="CAK11923.1" FT /translation="DSFRLGTIRRVIQLSRVVAIDAKKKQMKPSRAKSKTREKQGPAPG FT NVVRIMSAGRKPVEVENGSGRRRT" FT CDS 220723..221769 FT /transl_table=11 FT /locus_tag="pRL120212" FT /product="putative DNA ligase" FT /note="Similar to codons 215 to the C-terminus of FT Pyrococcus furiosus thermostable DNA Ligase Lig FT SWALL:DNLI_PYRFU (SWALL:P56709) (561 aa), and to entire FT protein of Agrobacterium tumefaciens agr_pat_68p FT SWALL:Q7D413 (EMBL:AE007877) (345 aa)" FT /note="similarity:fasta; SWALL:DNLI_PYRFU (SWALL:P56709); FT Pyrococcus furiosus; thermostable DNA LiGase; liG; length FT 561 aa; id=28.09; ungapped id=30.76; E()=5.4e-12; 299 aa FT overlap; query 34-317 aa; subject 221-508 aa" FT /note="similarity:fasta; SWALL:Q7D413 (EMBL:AE007877); FT Agrobacterium tumefaciens; agr_pat_68p; length 345 aa; FT id=75.5; ungapped id=76.16; E()=2e-99; 347 aa overlap; FT query 1-347 aa; subject 1-344 aa" FT /db_xref="GOA:Q1M4P7" FT /db_xref="InterPro:IPR014146" FT /db_xref="UniProtKB/TrEMBL:Q1M4P7" FT /inference="similar to sequence:UniProtKB:P56709" FT /inference="similar to sequence:INSDC:AE007877" FT /protein_id="CAK11924.1" FT /translation="MKRPRRPLPLLDESHSTLQSRPIRKRDPDQPSLPFDPMPSRVEPC FT LALLKPTVPVGPDWLYEVKLDGYRLAIHVEPKGVRVITRGGHDWTHRFPTIAAAAKELG FT VATAILDGEAVVLDDHGRSDFGALQRSLGGRGGKRVSTESILVAFDLLYLDGHDLTGTE FT LEVRRHLLEDLIPEGDDRAIRLSEEIELPAEELLEHACHHHLEGIIAKHRDRPYGSGRT FT GDWLKIKCVQSESFMVVGYEQSASARGGIGRLLLAGRRGLDWIYVGSVGTGFGASDAEY FT LKKTLDRLKTSRPVVPLKGNRLVLVQPTLIAEIEFRGWTDDGNLRHASYKGLREVQDNA FT AVFEMTYI" FT misc_feature 220822..221409 FT /note="Pfam match to entry PF01068.9 DNA_ligase_A_M, score FT 102.8, E-value 8.7e-28" FT /inference="protein motif:Pfam:PF01068.9" FT misc_feature 221461..221670 FT /note="Pfam match to entry PF04679.4 DNA_ligase_A_C, score FT 13.1, E-value 0.0051" FT /inference="protein motif:Pfam:PF04679.4" FT CDS complement(221796..222092) FT /transl_table=11 FT /locus_tag="pRL120213" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q8UCG1 (EMBL:AE009199); FT Agrobacterium tumefaciens; hypothetical protein atu2526; FT length 112 aa; id=38.83; ungapped id=42.1; E()=7.6e-08; 103 FT aa overlap; query 2-97 aa; subject 10-111 aa" FT /db_xref="InterPro:IPR005545" FT /db_xref="UniProtKB/TrEMBL:Q1M4P6" FT /inference="similar to sequence:INSDC:AE009199" FT /protein_id="CAK11925.1" FT /translation="MIVARYAVSDPGKAAERSRLIEEHKAYLHGAAIRILLSGPSAPPA FT EGKGSTAIVMAQVETLAEFEAFSAGDPFVRSGVYASVDIFEWRPSLGLLLESL" FT misc_feature complement(221820..222068) FT /note="Pfam match to entry PF03795.3 YCII, score FT 51.4,E-value 2.4e-12" FT /inference="protein motif:Pfam:PF03795.3" FT CDS complement(222089..222937) FT /transl_table=11 FT /locus_tag="pRL120214" FT /product="putative dioxygenase" FT /note="similarity:fasta; SWALL:Q8KTD6 (EMBL:AF498371); FT Alcaligenes eutrophus; FT 6-chlorohydroxyquinol-1,2-dioxygenase; tcpC; length 276 aa; FT id=49.81; ungapped id=50.36; E()=6.8e-52; 277 aa overlap; FT query 1-277 aa; subject 1-274 aa" FT /note="similarity:fasta; SWALL:Q7CWU7 (EMBL:AE008165); FT Agrobacterium tumefaciens; agr_c_4592p; length 295 aa; FT id=56.53; ungapped id=58.82; E()=2.5e-60; 283 aa overlap; FT query 4-275 aa; subject 11-293 aa" FT /db_xref="GOA:Q1M4P5" FT /db_xref="InterPro:IPR007535" FT /db_xref="UniProtKB/TrEMBL:Q1M4P5" FT /inference="similar to sequence:INSDC:AF498371" FT /inference="similar to sequence:INSDC:AE008165" FT /protein_id="CAK11926.1" FT /translation="MPEYFSEERSVEAVNSRMGQDINPRLAEVMASLVRHLHAFAKDVS FT LTQEEWELAIGFLTRSGHLCHDERQEFILLSDTLGLSMLVDAINNRRPPGATENTVLGP FT FHVEGAPVRQMGENISLDGKGESCLFIGRVLDLDGNPIEGARIDIWSDNSDGFYDVQQP FT DIQPKWNNRGIFVTGADGAYSFVGIKPVSYPIPDDGPVGQMLTSLGRHPYRPAHTHYLI FT TASGYQKLVTHTFVGDDPYLESDTVFGVKNSLVAPFERVDHPTVWRSDFDFVLTPVENR FT Q" FT misc_feature complement(222104..222637) FT /note="Pfam match to entry PF00775.10 Dioxygenase_C, score FT 242.2, E-value 9.3e-70" FT /inference="protein motif:Pfam:PF00775.10" FT misc_feature complement(222647..222871) FT /note="Pfam match to entry PF04444.3 Dioxygenase_N, score FT 103.4, E-value 5.7e-28" FT /inference="protein motif:Pfam:PF04444.3" FT CDS complement(222958..224016) FT /transl_table=11 FT /gene="tftE" FT /locus_tag="pRL120215" FT /product="putative maleylacetate reductase" FT /EC_number="1.3.1.32" FT /note="similarity:fasta; SWALL:TFTE_BURCE (SWALL:Q45072); FT Burkholderia cepacia; maleylacetate reductase; tftE; length FT 352 aa; id=53.73; ungapped id=53.89; E()=4.9e-63; 348 aa FT overlap; query 5-351 aa; subject 4-351 aa" FT /note="similarity:fasta; SWALL:Q7CWU6 (EMBL:AE008165); FT Agrobacterium tumefaciens; agr_c_4594p; length 351 aa; FT id=67.81; ungapped id=67.81; E()=7.1e-81; 348 aa overlap; FT query 4-351 aa; subject 3-350 aa" FT /db_xref="GOA:Q1M4P4" FT /db_xref="InterPro:IPR001670" FT /db_xref="UniProtKB/TrEMBL:Q1M4P4" FT /inference="similar to sequence:UniProtKB:Q45072" FT /inference="similar to sequence:INSDC:AE008165" FT /protein_id="CAK11927.1" FT /translation="MVAPFRYTVSAAQVIFGSGSLSRLADAMTEQGGKRALILSTPHQK FT AEAERIAASLGPLAAGLFHDATMHTPVDVTERAMAAYNAAGADCVIAIGGGSTIGLGKA FT IAYRNDALQIVVATTYAGSEVTPILGQTENGQKTTVRGAGILPEVVIYDPELTLGLPVA FT ISVSSGLNAMAHAVEGLYAQDRNPISSMMAVEGLRALKQALPQIVNAPGDIEPRSEALY FT GSWLCGTVLGAVGMALHHKLCHTLGGSFDLPHAETHAVILPHSAAYNAEAAADALKPAA FT DLFGGSLGSGLYDFAASIGAPLALRDLGMKEADLDHAAELAAQNPYWNPRPIEREAIRA FT LLQSAWEGARPR" FT misc_feature complement(223003..223986) FT /note="Pfam match to entry PF00465.7 Fe-ADH, score FT 58.2,E-value 1.1e-18" FT /inference="protein motif:Pfam:PF00465.7" FT sig_peptide complement(223942..224016) FT /gene="tftE" FT /locus_tag="pRL120215" FT /note="Signal peptide predicted for pRL120215 by SignalP FT 2.0 HMM (Signal peptide probabilty 0.652) with cleavage FT site probability 0.576 between residues 25 and 26" FT /inference="protein motif:SignalP-HMM:2.0" FT CDS complement(224018..224998) FT /transl_table=11 FT /locus_tag="pRL120216" FT /product="putative amidohydrolase" FT /note="similarity:fasta; SWALL:Q8RJ47 (EMBL:AB033664); FT Pseudomonas paucimobilis; 5-carboxyvanillate decarboxylase; FT ligW; length 334 aa; id=31.61; ungapped id=32.62; FT E()=7.6e-29; 291 aa overlap; query 35-324 aa; subject FT 51-333 aa" FT /note="similarity:fasta; SWALL:Q8UCF8 (EMBL:AE009199); FT Agrobacterium tumefaciens; hypothetical protein atu2529; FT length 327 aa; id=82.76; ungapped id=82.76; E()=1.6e-111; FT 325 aa overlap; query 1-325 aa; subject 1-325 aa" FT /db_xref="GOA:Q1M4P3" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q1M4P3" FT /inference="similar to sequence:INSDC:AB033664" FT /inference="similar to sequence:INSDC:AE009199" FT /protein_id="CAK11928.1" FT /translation="MQGKIALEEHFAIPETLQDSAGFVPGDYWKELSARLLDIQEKRLR FT LMDAHGIEKMILSLNAPAVQAIPDRAKALEISRRANDFLAEQCVKNPNRFLGFAALPLQ FT DPDAATQELQRCVTTMGFVGALVNGFSQEGDGTTPLYYDLPQYRSFWAEVEKLNVPFYL FT HPRNPLPQDSRIYAGHSWLMGPTWAFAQETAVHALRLMGSGLFDEHPALRIIVGHMGEG FT LPYMMWRIDNRNAWVKVEKSYPAKRPIADYFNENFYITTSGNFRTQSLIDAMLEIGADR FT ILFSADWPFENIDHAANWFDSATISEADRLKIGRTNAVSLFKLDR" FT misc_feature complement(224027..224992) FT /note="Pfam match to entry PF04909.2 Amidohydro_2, score FT 152.9, E-value 6.9e-43" FT /inference="protein motif:Pfam:PF04909.2" FT CDS complement(225046..226278) FT /transl_table=11 FT /locus_tag="pRL120217" FT /product="putative dehydrogenase/hydroxylase" FT /note="similarity:fasta; SWALL:PIGM_RHOER (SWALL:O69349); FT Rhodococcus erythropolis; pigment production hydroxylase; FT length 393 aa; id=32.14; ungapped id=33.42; E()=1.3e-36; FT 392 aa overlap; query 21-408 aa; subject 7-387 aa" FT /note="similarity:fasta; SWALL:Q8UCF7 (EMBL:AE009199); FT Agrobacterium tumefaciens; oxidoreductase; length 409 aa; FT id=72.95; ungapped id=73.14; E()=6.8e-112; 392 aa overlap; FT query 19-410 aa; subject 19-409 aa" FT /db_xref="GOA:Q1M4P2" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:Q1M4P2" FT /inference="similar to sequence:UniProtKB:O69349" FT /inference="similar to sequence:INSDC:AE009199" FT /protein_id="CAK11929.1" FT /translation="MNNTAALFPASARVKTACLADRIAPLLDEIRAGARDTEKSGRVPA FT RSIDLLRSAGYFDIVKPARFGGDEGSFAELVDANIELSSACASTGWVAGLLSAHQWLLA FT MFDERVQQEVWGSDPDALLCGSYAPVRMAERTEGGFRLSGDWAFASGCENAQWALCAAI FT IPPNGEGERPVPAFLLVPASDYTIAETWDVVGLAGTGSKSLILKDVFVPEYRILSFPDA FT TSGRTPGGRGYKGIGLFNIPLLMGVPFCLGSAAVGAAKGALDSYIDQIGTRVTRGAVAG FT GNNKIAEFPTIQLRVAEASASVDAAREIILRDIARAQQLAQAREDGTGEITEEDRILAR FT RSQSFAVSLALRAVEALNASTGGLGLQMSNPVQRAWRDANAVGRHISMNWDAVGTMAGQ FT QLLGLPPKGQF" FT misc_feature complement(225118..225591) FT /note="Pfam match to entry PF00441.11 Acyl-CoA_dh, score FT -14.6, E-value 0.00053" FT /inference="protein motif:Pfam:PF00441.11" FT CDS complement(226289..226828) FT /transl_table=11 FT /locus_tag="pRL120218" FT /product="putative flavin reductase" FT /note="similarity:fasta; SWALL:Q8KL32 (EMBL:U80928); FT Rhizobium etli; probable FT 4-hydroxyphenylacetate-3-monooxygenase.; yp049; length 208 FT aa; id=37.16; ungapped id=37.41; E()=1.5e-16; 148 aa FT overlap; query 19-166 aa; subject 50-196 aa" FT /note="similarity:fasta; SWALL:Q7CWU3 (EMBL:AE008165); FT Agrobacterium tumefaciens; agr_c_4599p; length 179 aa; FT id=58.04; ungapped id=59.76; E()=3.7e-38; 174 aa overlap; FT query 4-172 aa; subject 3-176 aa" FT /db_xref="GOA:Q1M4P1" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:Q1M4P1" FT /inference="similar to sequence:INSDC:U80928" FT /inference="similar to sequence:INSDC:AE008165" FT /protein_id="CAK11930.1" FT /translation="MSATAALGIAPAPAPISDAFRSTMRRFPATVTVISACRNGADHGM FT TATAVTSLSMDPPSLIICLNNRTYLHDMLLEVPEFAVSILTDRQAAVSEGFSGKIAPER FT RFDAADWVRHERGMMVLDTAHASVVCRRMGAVPYGTHTIFIGQVVDTRHSDDTIALMYE FT NSKYCAPQHALPASQN" FT misc_feature complement(226316..226759) FT /note="Pfam match to entry PF01613.6 Flavin_Reduct, score FT 131.4, E-value 2e-36" FT /inference="protein motif:Pfam:PF01613.6" FT CDS 227029..227481 FT /transl_table=11 FT /locus_tag="pRL120219" FT /product="putative marR family transcriptional regulator" FT /note="similarity:fasta; SWALL:Q8UCF5 (EMBL:AE009200); FT Agrobacterium tumefaciens; transcriptional regulator, marr FT family; length 143 aa; id=50.35; ungapped id=50.35; FT E()=2.6e-21; 141 aa overlap; query 2-142 aa; subject 3-143 FT aa" FT /db_xref="GOA:Q1M4P0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1M4P0" FT /inference="similar to sequence:INSDC:AE009200" FT /protein_id="CAK11931.1" FT /translation="MYKLTDSVPYLLNRAGVRIAEVFAQRIAEDNLSVAMYRVLAMLKE FT RRESTLGDLADVVSVEISTLSRLVGTLAKRKLVSRTRPEDNGRIVIVRLTPQGEALTER FT LMPLAVELERTAVQDMSDEEVAALKKALRRMHSNLPGMSGKGKVAN" FT misc_feature 227122..227433 FT /note="Pfam match to entry PF01047.8 MarR, score FT 78.3,E-value 2.1e-20" FT /inference="protein motif:Pfam:PF01047.8" FT misc_feature 227173..227238 FT /note="Predicted helix-turn-helix motif with score FT 1290.000, SD 3.58 at aa 112-133, sequence FT STLGDLADVVSVEISTLSRLVG" FT CDS 227554..228966 FT /transl_table=11 FT /locus_tag="pRL120220" FT /product="putative MFS family permease" FT /note="similarity:fasta; SWALL:Q8UCG2 (EMBL:AE009199); FT Agrobacterium tumefaciens; mfs permease; length 449 aa; FT id=65.7; ungapped id=66.89; E()=2e-106; 449 aa overlap; FT query 24-470 aa; subject 4-446 aa" FT /db_xref="GOA:Q1M4N9" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1M4N9" FT /inference="similar to sequence:INSDC:AE009199" FT /protein_id="CAK11932.1" FT /translation="MRVSLALGGTTPATIQEDLYTDRRGPAAWQERTSCTQMYGEGKLA FT IQDLAIINERVRSPNIIIALCGLLILFDGYDLIVYGAVAPALLGEASWGLTPGMVGRAA FT SITLFGMLLGALVAGTLADRIGRRKVIIGSLLSFSVMMIGSGLAPNFLAFEGTRFLAGL FT GLGALFPTVTALIIEFSPPKRKAMAYSIALLGYLAGGIISGILGMLLIQKYGWRPLMII FT GGAPILLLPFFIRLIPESPEWLATKNRQTEANQIANQYGLPNPVARPAASRQVGIRSLF FT SEGRLLPTLNAWGIHFCSLLLTFGMVNWLPTIMNKMGYDLGSALLFSVTLNLGAAVGLL FT IGARIADRGNVKIVVAGMFLLGACSIWLLTQVDQGLQVYGLVALAGTGTIGTQILANVL FT VGNLYPVEIRGTGLGFSLGIGRIGGMIGPAIGGAVLGAGLAPQWNFYIFASVGVLGCVL FT ALMTLLYRKKAD" FT misc_feature order(227734..227802,227845..227913,227947..228015, FT 228028..228096,228115..228183,228196..228264, FT 228427..228495,228523..228591,228610..228669, FT 228697..228765,228802..228870,228880..228948) FT /locus_tag="pRL120220" FT /note="12 probable transmembrane helices predicted at aa FT 61-83, 98-120, 132-154,159-181, 188-210, 215-237, 292-314, FT 324-346, 353-372,382-404, 417-439 and 443-465" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 227740..228960 FT /note="Pfam match to entry PF00083.10 Sugar_tr, score 62.1, FT E-value 1.5e-15" FT /inference="protein motif:Pfam:PF00083.10" FT misc_feature 227749..228861 FT /note="Pfam match to entry PF07690.1 MFS_1, score FT 161.3,E-value 2.1e-45" FT /inference="protein motif:Pfam:PF07690.1" FT CDS 229236..229469 FT /transl_table=11 FT /locus_tag="pRL120221" FT /product="conserved hypothetical protein" FT /note="similarity:fasta; SWALL:Q8UJN6 (EMBL:AE008964); FT Agrobacterium tumefaciens; hypothetical protein atu5440; FT length 78 aa; id=82.85; ungapped id=82.85; E()=7.6e-19; 70 FT aa ove |