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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM231254; SV 1; linear; mRNA; STD; INV; 812 BP.
XX
AC   AM231254;
XX
DT   17-FEB-2006 (Rel. 86, Created)
DT   17-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE   Ciona intestinalis partial mRNA for beta1,4-galactosyltransferase 7
DE   (b4Gal-T7 gene)
XX
KW   b4Gal-T7 gene; beta1,4-galactosyltransferase 7.
XX
OS   Ciona intestinalis
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona;
OC   Phlebobranchia; Cionidae; Ciona.
XX
RN   [1]
RP   1-812
RA   Oriol R.;
RT   ;
RL   Submitted (16-FEB-2006) to the EMBL/GenBank/DDBJ databases.
RL   Oriol R., U602, Inserm, 16 Av. Paul Vaillant-Couturier, 94807, FRANCE.
XX
RN   [2]
RA   Ouzzine M., Bui C., Fournel-Gigleux S., Mollicone R., Oriol R.;
RT   "Phylogeny of beta1,4-galactosyltransferases";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..812
FT                   /organism="Ciona intestinalis"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7719"
FT   CDS             <1..790
FT                   /codon_start=2
FT                   /gene="b4Gal-T7"
FT                   /product="beta1,4-galactosyltransferase 7"
FT                   /function="transfers galactose to xylose in the linkage
FT                   region of GAG"
FT                   /EC_number="2.4.1.133"
FT                   /db_xref="GOA:Q2HPP5"
FT                   /db_xref="InterPro:IPR003859"
FT                   /db_xref="UniProtKB/TrEMBL:Q2HPP5"
FT                   /protein_id="CAJ77187.1"
FT                   /translation="LKGDDPAWGKHRLAVIVPYRGAFEELLLFVPHLHKFLCDRRIRHK
FT                   IFVIHQVDKFRFNRGFLINVGFLLSRDKFDYLAMHDIDLLPINPMLNYSYPEQGPYHLS
FT                   SPEYHPDYHGRRFIGGILLFTREDFTKVKGMTNGDWGWGGEDNELFTRIRLSKLKLTRA
FT                   SGLTTGRNTFKNTHDESKRPRDKERFDAIKGNQFELDGKYGFHNADYKLERVVNMKIDE
FT                   ADVTIYNVKLHCNILETPWCQTNYTVSDFKKQKNKNAIKN"
FT   5'UTR           791..>812
FT                   /gene="b4Gal-T7"
XX
SQ   Sequence 812 BP; 268 A; 153 C; 173 G; 218 T; 0 other;
     tctcaaggga gacgacccgg cgtggggaaa acatcggtta gcagtgattg ttccttacag        60
     aggagcattt gaggaactcc ttctgtttgt acctcatctg cataagtttt tgtgtgacag       120
     gcgcatcagg cacaaaatat tcgtaattca tcaagtggat aaattcagat ttaacagagg       180
     tttccttatt aacgtcggat ttcttttatc tcgagacaag tttgattatc ttgctatgca       240
     cgatattgac ctactgccca tcaacccaat gcttaattac tcatacccgg aacagggtcc       300
     gtaccatctg tcgtctcccg aatatcatcc tgattaccat ggtcgtcgtt ttatcggagg       360
     aattctgctt ttcaccagag aagacttcac taaggttaaa ggaatgacca atggtgactg       420
     gggttggggt ggagaagata acgaattgtt tacaagaata agattatcga aactgaagtt       480
     gactagagcc agtggactta ctactgggag aaacactttt aaaaacacac atgatgagtc       540
     gaagcgacca agagataaag agagattcga tgcaattaag ggtaatcagt ttgaattaga       600
     cggcaagtac ggctttcata atgctgacta caagctggaa agagtcgtaa acatgaagat       660
     tgacgaagct gatgtaacaa tatataatgt caagctacat tgcaacatat tggaaacacc       720
     ttggtgccaa acaaactata cagtgagcga cttcaaaaaa cagaagaaca aaaacgccat       780
     taaaaactaa atactgtatc tttagaacat tt                                     812
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