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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168395; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168395;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium elkanii partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium elkanii
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium elkanii"
FT                   /host="Glycine max"
FT                   /strain="USDA76 = LMG6134"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:California"
FT                   /db_xref="taxon:29448"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M9"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M9"
FT                   /protein_id="CAJ44654.1"
FT                   /translation="LAAAWRFAERTGRKLVIDWRGSCYLDQPFTNAFPVFFEPVQDIAG
FT                   VQVICDDRINQHSFPGPFFPAWWNRPAIDCAYRPDEQIFRERDELDQLFQSGQDSDANT
FT                   VVCDACLMWRCDEEAEREIFRSIKPRSEVQARIDAIFREHLASFSVIGIHV"
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SQ   Sequence 467 BP; 95 A; 124 C; 137 G; 111 T; 0 other;
     gctggctgca gcgtggcgtt ttgccgagcg gaccggacgg aagctggtca tcgattggcg        60
     ggggtcctgt tatctcgatc aaccattcac caacgccttt cccgtcttct tcgaaccggt       120
     tcaagatatt gccggcgtac aggtgatctg cgacgaccgg atcaaccagc actcatttcc       180
     tggaccattt ttcccggcat ggtggaatag gccagctatt gattgcgcct atcgcccgga       240
     tgagcagatt ttccgggaac gcgatgaact cgatcagctg ttccaaagcg ggcaagatag       300
     cgatgcaaat acagttgtgt gtgacgcctg cctgatgtgg cgctgcgatg aggaggctga       360
     acgagagatc tttcggagca tcaagccgcg atccgaagtg caggcacgga ttgatgccat       420
     cttccgtgag caccttgcgt cgttcagcgt gatcggcatt catgttc                     467
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