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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168393; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168393;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. USDA3259 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. USDA3259
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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DR   StrainInfo; 374045; USDA 3259.
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. USDA3259"
FT                   /host="Phaseolus lunatus"
FT                   /strain="USDA3259"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Illinois"
FT                   /db_xref="taxon:353535"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M7"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M7"
FT                   /protein_id="CAJ44652.1"
FT                   /translation="LAAAWRFAQRTRRNLVIDWRGSCYLDQPFANAFPVFFEPLQAIAG
FT                   VPVICDDQINQRSFPGPFFPAWWNRPTIDCAYRPDEQIFRERDELDQLFQSEQDSDANT
FT                   VVCDACLMWRCDEEAEREIFRSIKPRPEVQARIDAIFGEHFEPYSVIGIHI"
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SQ   Sequence 467 BP; 97 A; 129 C; 134 G; 107 T; 0 other;
     gctggcggca gcttggcgtt ttgcgcagcg gaccagacgg aacctggtca tcgattggcg        60
     cgggtcctgt tatctcgatc aaccattcgc caacgccttt ccggtctttt tcgaaccact       120
     tcaagccatt gctggcgtac cggtgatctg cgacgaccag atcaatcagc gttcatttcc       180
     gggaccattc ttcccggcat ggtggaatag gcctaccatt gattgcgcct atcggcccga       240
     cgagcagatt ttccgggaac gcgacgagct cgatcaactg ttccaaagcg agcaagatag       300
     cgatgcaaac acggttgtgt gtgacgcctg cctgatgtgg cgctgcgatg aggaggctga       360
     acgtgagatc tttcggagca tcaagccgcg acccgaagtg caggcacgga ttgatgccat       420
     cttcggggag cactttgaac cgtacagcgt gatcggcatt catattc                     467
//
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