spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168392; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
XX
AC   AM168392;
XX
DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Bradyrhizobium sp. Q4A partial nodZ gene for fucosyltransferase
XX
KW   fucosyltransferase; nodZ gene.
XX
OS   Bradyrhizobium sp. Q4A
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
XX
RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
XX
RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
XX
RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. Q4A"
FT                   /host="Lespedeza sp."
FT                   /strain="Q4A"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan"
FT                   /db_xref="taxon:361297"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M6"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M6"
FT                   /protein_id="CAJ44651.1"
FT                   /translation="LAAAWRFAKQTGRTLAIDWRGSCYLDEPFTNAFPVFFEPVDDIAG
FT                   VRVICDDDINKRSFPGPFFPAWWNKPSIDCVYRPDEQIFRERDQLDQLFQRQRDSDAST
FT                   VVCDACLMWRCDQEAEREIFRSIKPRAAIQARIDAIYREHFEPYSVIGIHV"
XX
SQ   Sequence 467 BP; 99 A; 125 C; 135 G; 108 T; 0 other;
     actggcagca gcttggcgct ttgcaaagca gacagggcgg acgctagcca tcgattggcg        60
     ggggtcttgc tatcttgatg aaccattcac caatgccttt ccggtcttct tcgaaccggt       120
     tgacgacatt gccggcgtgc gggtgatttg cgacgacgac atcaataagc gctcgtttcc       180
     gggaccattc tttccggcat ggtggaataa gccatctatc gattgcgtct atcgcccgga       240
     cgagcagatc ttccgggaac gcgaccaact cgaccaactg ttccaacgtc agagagatag       300
     tgacgctagc acggttgtgt gtgatgcctg cctgatgtgg cgctgcgatc aagaggcaga       360
     gcgagagatc tttcggagca tcaagccgcg agccgcaatt caggctcgca ttgatgcgat       420
     ctaccgcgag cactttgagc cgtacagcgt gatcggtatt catgttc                     467
//
spacer
spacer