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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168391; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168391;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. Mm1-3 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. Mm1-3
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. Mm1-3"
FT                   /host="Machaerium milleflorum"
FT                   /strain="Mm1-3"
FT                   /mol_type="genomic DNA"
FT                   /country="Panama"
FT                   /db_xref="taxon:98365"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M5"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M5"
FT                   /protein_id="CAJ44650.1"
FT                   /translation="LASAWQYAKRTGRTLVIDWRGSCYLDDPFTNAFGVFFEPIQDIAG
FT                   VPVICDDRINQLSFPGPFFPTWWNRPSFDCVYRPDEQIFRERDELRQLFEARDDTHANT
FT                   VVCDACLMWGCDQDAERQVFRAVKLRSEVQARIDAIYQEHFKGRSVIGVHV"
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SQ   Sequence 467 BP; 93 A; 119 C; 133 G; 122 T; 0 other;
     gctcgcgtca gcttggcaat acgccaagcg gacagggcgt acgctggtta tcgattggcg        60
     cggatcttgt tatctcgatg accccttcac caacgccttt ggggtgttct tcgagccaat       120
     tcaggacatc gccggtgtac ccgtgatttg cgatgatcgg atcaatcaac tctcttttcc       180
     cggaccgttt tttccaacct ggtggaatcg gccatccttc gactgcgttt atcgaccaga       240
     cgaacagatt ttccgcgaac gcgatgagct gaggcagctc ttcgaagccc gggatgacac       300
     tcacgcgaat actgtggtgt gtgatgcttg tttgatgtgg ggttgtgatc aggatgccga       360
     gcgacaagta tttcgggccg tcaaactgcg gtccgaagtt caagctcgga ttgacgcgat       420
     ctatcaggag cacttcaagg gtcgcagcgt aattggggtt catgttc                     467
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