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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168390; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168390;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. F3b partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. F3b
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. F3b"
FT                   /host="Lespedeza cuneata"
FT                   /strain="F3b"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan"
FT                   /db_xref="taxon:224322"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M4"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M4"
FT                   /protein_id="CAJ44649.1"
FT                   /translation="LAAAWRFAQRTGRTLAIDWRGSCYLDQPFTNAFPVFFEPIQDIAG
FT                   VPVICDDRINQRSFPGPFFPAWWNKPSIDCVYRPDEQIFRERDELDQLFESQEDSDANT
FT                   VVCDACLMWRCDQDAEREIFRSIKPRSEIQARMMAIYRGHFEPYSMIGIHV"
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SQ   Sequence 467 BP; 98 A; 133 C; 131 G; 105 T; 0 other;
     gctcgctgcg gcctggcgtt ttgcacagcg gaccggacgg acgcttgcca tcgactggcg        60
     gggatcttgt tatctcgatc agccattcac caatgccttt ccggtcttct tcgaaccaat       120
     tcaagacatt gctggcgtac cggtgatctg cgacgaccgg atcaaccagc gctcatttcc       180
     gggaccattc ttcccggcat ggtggaacaa gccgtccata gactgcgtct atcggccgga       240
     cgagcagatt ttccgggagc gcgatgaact cgaccaactg ttcgaaagcc aggaagatag       300
     tgacgctaac accgttgtgt gcgacgcctg cttgatgtgg cgctgcgatc aggatgccga       360
     acgggaaatc tttcggagca tcaaaccgcg atctgaaatt caggctcgga tgatggccat       420
     ctaccgcggg cactttgagc cgtacagcat gatcggcatt catgttc                     467
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