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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168389; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168389;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium yuanmingense partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium yuanmingense
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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DR   StrainInfo; 302123; CCBAU 10071.
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium yuanmingense"
FT                   /host="Lespedeza cuneata"
FT                   /strain="type strain: CCBAU10071"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /db_xref="taxon:108015"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M3"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M3"
FT                   /protein_id="CAJ44648.1"
FT                   /translation="LAAAWRFAKQTGRMLAIDWRGSCYLDEPFTNAFPVFFEPVEDIAG
FT                   VPVICDDDINKRSFPGPFFPAWWNKPSIDCVYRPDEQIFRERDQLDQLFQSQRDSDANT
FT                   VVCDACLMWRCDQEAEREIFRSIKPRAAIQARIDAIYRKHFEPYSVIGIHV"
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SQ   Sequence 467 BP; 101 A; 124 C; 134 G; 108 T; 0 other;
     cctggcggca gcttggcgtt ttgcaaagca gacagggcgc atgctagcca tcgattggcg        60
     ggggtcttgc tatcttgatg aaccattcac caatgccttt ccggtcttct tcgaaccggt       120
     cgaagacatt gccggcgtgc cggtgatttg cgacgacgac atcaacaaac gttcgtttcc       180
     gggaccattc tttccggcat ggtggaacaa gccatctatc gattgcgtct accgcccgga       240
     cgagcagatc ttccgggaac gcgaccaact cgatcaattg ttccaaagtc agagagatag       300
     tgacgctaac acggttgtgt gtgatgcctg cctgatgtgg cgctgcgatc aggaggcgga       360
     gcgagagatc tttcggagta tcaagccgcg agcggcaatt caggctcgga ttgatgccat       420
     ctaccgcaag cactttgagc cgtacagcgt gatcggcatt catgtca                     467
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