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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168388; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168388;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. C10-2 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. C10-2
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. C10-2"
FT                   /host="Inga oerstediana"
FT                   /strain="C10-2"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /db_xref="taxon:353539"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M2"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M2"
FT                   /protein_id="CAJ44647.1"
FT                   /translation="LASAWQHAKRTGRTLIIDWRGSCYLDDPFTNAFGVFFEPIQDIAG
FT                   VPVICDDRINQLSFPRPFFPTWWNRPSIDCVHRPDEQIFRERDELRQLFEARDDTHANT
FT                   VVCDACLMWGCDQDAEREIFRAVKLRSEVQARIDAIYQEHFKGRSVIGVHV"
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SQ   Sequence 467 BP; 94 A; 119 C; 134 G; 120 T; 0 other;
     gctcgcgtcg gcttggcaac acgccaagcg gaccgggcgt acgctgatta tcgattggcg        60
     cggatcctgt tatctcgatg accccttcac caacgccttt ggggtgttct tcgagccaat       120
     tcaggacatc gccggtgtac ccgtgatttg cgatgatcgg atcaatcaac tctcttttcc       180
     gagaccgttt tttccaactt ggtggaatcg gccatccatc gactgcgttc atcgaccgga       240
     cgaacagatt ttccgcgaac gcgatgagct gaggcagctc ttcgaggctc gggatgatac       300
     tcacgcgaat accgtggtgt gtgatgcttg tttgatgtgg ggttgtgatc aggatgccga       360
     gcgagaaata tttcgggccg tcaaactgcg gtctgaagtt caagctcgga ttgacgcgat       420
     ctatcaggag cacttcaagg gtcgcagcgt aataggcgtt catgttc                     467
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