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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168387; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168387;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. Lcamp1 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. Lcamp1
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. Lcamp1"
FT                   /host="Lupinus campestris"
FT                   /strain="Lcamp1"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /db_xref="taxon:353516"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9M1"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9M1"
FT                   /protein_id="CAJ44646.1"
FT                   /translation="LASAWRFAKRSGRTLAIDWRGSCYLDQPFTNAFPVFFEPVEAIDG
FT                   VPVICDDQINQVSFPGPFFPSWWNKAPIDCVYRPDEQIFKERDELDRLFQSPEDVDANT
FT                   VVCDACLMWRCDQDAERQIFRTVKPQRGIRARIDAIYQEHFQGHSIIGVHV"
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SQ   Sequence 467 BP; 109 A; 113 C; 131 G; 114 T; 0 other;
     gttggcatca gcttggcgtt tcgcaaagcg gagcgggcga acgttggcaa ttgattggcg        60
     tggctcctgt tatctcgatc agccattcac caacgccttt ccagtgtttt tcgagccagt       120
     tgaagccatc gacggagtac cagtcatttg cgatgatcag atcaatcagg tgtcatttcc       180
     ggggccgttc ttcccaagct ggtggaataa agcgccgata gattgcgttt atcggccaga       240
     tgaacagatt ttcaaagagc gtgacgaact ggatcgactc ttccaaagcc cggaagacgt       300
     tgacgctaac actgtggttt gtgacgcctg cttaatgtgg cgctgcgatc aggatgcgga       360
     acggcagata tttcggacgg tcaaacccca acggggcata cgggctcgaa ttgatgccat       420
     ttaccaagag cactttcagg ggcacagcat aatcggagtg catgttc                     467
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