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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168385; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168385;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. FTA6 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. FTA6
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. FTA6"
FT                   /host="Lupinus nootkatensis"
FT                   /strain="FTA6"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Kodiak Island, Alaska"
FT                   /db_xref="taxon:353509"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L9"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L9"
FT                   /protein_id="CAJ44644.1"
FT                   /translation="LASAWHYAKRTGRTLAIDWRGSCYLDQPFTNAFPVFFEPVDAIDG
FT                   VRVICDDQINQVSFPGPFFPHWWNKAPIDCVYRPDEQIFRERDELDQLFQRPEDVDANT
FT                   VVCDACLMWRCDQDAERQIFRSIKPQSEIQARIDAIYQEHFEGHSIIGVHV"
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SQ   Sequence 467 BP; 106 A; 115 C; 131 G; 115 T; 0 other;
     cttggcgtca gcttggcatt acgcaaagcg gacggggcgg acattggcca tcgattggcg        60
     tggctcgtgt tatctcgatc agccattcac caacgccttt ccagtgttct tcgagccagt       120
     tgatgccatc gatggcgtgc gagtcatttg cgatgaccag atcaatcagg tgtcatttcc       180
     agggccgttc ttcccgcact ggtggaataa agcaccgata gactgcgttt atcggccaga       240
     tgaacagata ttccgagagc gcgacgaact ggatcaactt ttccagaggc cggaagatgt       300
     tgacgctaac accgtggtgt gtgacgcttg cttgatgtgg cgctgcgatc aggatgccga       360
     acggcagata tttcgcagca tcaaaccgca atctgaaatt caggcgcgaa ttgatgccat       420
     ttaccaggag cattttgagg ggcatagcat aatcggcgtt catgttc                     467
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