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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168384; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168384;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. CH2509 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. CH2509
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. CH2509"
FT                   /host="Lupinus albescens"
FT                   /strain="CH2509"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil:Rio Grande do Sul"
FT                   /db_xref="taxon:353534"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L8"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L8"
FT                   /protein_id="CAJ44643.1"
FT                   /translation="LAAAWQYAKRTGRTLVIDWRGSCYLDQPFTNAFRVFFEPVHDIAG
FT                   VRVICDDRVNSLSLPGPFFPTWWNRPSIDCVYRPDEQIFRERDELRQLFEAKDDTHANT
FT                   VVCDACLMWACDQDAERQIFRSIKLRSEIQARIDAIHREHFEGRSVIGVHV"
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SQ   Sequence 467 BP; 97 A; 125 C; 126 G; 119 T; 0 other;
     actcgcggca gcctggcagt acgccaagcg gacaggacgt acactggtta tcgattggcg        60
     cggctcttgc tatctcgatc aaccctttac caacgctttt cgagtgtttt tcgaaccggt       120
     tcatgacatc gccggcgtac gtgtgatctg cgatgatcgg gtcaactccc tttctcttcc       180
     cgggccgttt tttccaacct ggtggaatcg accatccatc gattgcgttt atcgaccgga       240
     cgaacagata ttccgagaac gcgacgagct gaggcagctc ttcgaggcca aagatgatac       300
     tcacgccaat accgtggtgt gtgatgcttg tttgatgtgg gcttgcgatc aggacgccga       360
     gcgacagata tttcgtagca tcaaactgcg gtctgaaatt caagctcgga tcgatgcgat       420
     acatcgcgag cactttgagg gtcgcagcgt catcggcgtt catgttc                     467
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