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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168382; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168382;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. CH2493 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. CH2493
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. CH2493"
FT                   /host="Lupinus paraguariensis"
FT                   /strain="CH2493"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:353538"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L6"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L6"
FT                   /protein_id="CAJ44641.1"
FT                   /translation="LAAAWSYAKRTNRTLAIDWRGSCYLDQPFVNAFSVFFEPIQDIAG
FT                   VRVICDDQINQFSFPGPFFPRWWNKPSIDSIFRPDEQIFRERDELRQLFESQADCEANT
FT                   VVCDACLMWGCDEDAERQIFRSVRPRSEIQRRIDAIYRDQFAGHSIIGVHV"
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SQ   Sequence 467 BP; 100 A; 118 C; 133 G; 116 T; 0 other;
     actggcggcg gcttggagtt atgcgaagcg aaccaatcgg acgctcgcta tcgactggcg        60
     gggctcctgt tatctcgatc agccattcgt gaatgccttt tcggtgttct ttgaaccgat       120
     tcaagacatc gctggcgtac gggtcatctg cgatgatcag atcaatcaat tctcgttccc       180
     cggcccattc ttcccacggt ggtggaataa gccatcgatc gacagcattt tccgtccaga       240
     tgaacaaatt ttccgagagc gtgacgaact gcgtcagctg tttgaaagcc aagctgattg       300
     cgaggccaac acggtggtgt gtgacgcctg cttgatgtgg ggttgcgatg aagatgccga       360
     acgacagatc tttcggagcg tccggcctcg gtctgaaatc cagaggcgga tcgatgccat       420
     ctatcgagat cagtttgcgg gacatagcat aatcggcgtt catgtgc                     467
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