spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168381; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
XX
AC   AM168381;
XX
DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Bradyrhizobium sp. CH2490 partial nodZ gene for fucosyltransferase
XX
KW   fucosyltransferase; nodZ gene.
XX
OS   Bradyrhizobium sp. CH2490
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
XX
RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
XX
RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
XX
RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. CH2490"
FT                   /host="Lupinus paranensis"
FT                   /strain="CH2490"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:353514"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L5"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L5"
FT                   /protein_id="CAJ44640.1"
FT                   /translation="LASAWRYAKRTERTLAIDWRGSCYLDQPFTNAFQVFFEPVQAIDG
FT                   VRVICDDEINQVSFPGPFFPRWWNKAPIDCVYRPDEQIFRERDELGRLFQSAEDVDAKT
FT                   VVCDACFMWRCDQDAERQIFRTIKPQSEIQARIDGIYRECFEGHSIIGVHV"
XX
SQ   Sequence 467 BP; 104 A; 109 C; 136 G; 118 T; 0 other;
     gttggcgtca gcctggcgtt acgcaaagcg gactgagcgg acgttagcca tcgattggcg        60
     tggctcgtgt tatctcgatc agccattcac caacgccttt caagtgttct tcgaaccagt       120
     gcaagcgatc gatggcgtgc gagtcatttg tgatgacgag attaatcagg tgtcatttcc       180
     ggggccgttc ttcccgcgct ggtggaataa agcaccgata gactgcgttt atcggccaga       240
     tgaacaaatt ttccgagagc gtgacgaact gggtcgactt ttccaaagtg ccgaagatgt       300
     cgatgcgaaa accgttgtgt gtgacgcctg ctttatgtgg cgctgcgatc aggacgccga       360
     acggcagata tttcggacca tcaagccgca atctgaaatt caggctcgaa ttgatggcat       420
     ttaccgggag tgctttgagg ggcacagtat aatcggggtt catgttc                     467
//
spacer
spacer