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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168380; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168380;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. CH2438 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. CH2438
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. CH2438"
FT                   /host="Lupinus sp."
FT                   /strain="CH2438"
FT                   /mol_type="genomic DNA"
FT                   /country="Bolivia"
FT                   /db_xref="taxon:353508"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L4"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L4"
FT                   /protein_id="CAJ44639.1"
FT                   /translation="LASAWSYAQRTGRTLVVDWRGSCYIDRPFSNAFPVFFEPVEDIAG
FT                   VPVICDDRINQLSFPGPFFPRWWNRPSVDCINRPDEQIFRERDELTELFQSREDNEANT
FT                   IVCDACLMWRCGEEAERLIFRNIKLRSEIQARIDDLYEKHFSGHSIIGVHV"
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SQ   Sequence 467 BP; 97 A; 126 C; 138 G; 106 T; 0 other;
     gctggcgtca gcctggtcgt acgcgcagcg gaccgggcgg acgctcgtcg ttgactggcg        60
     cggttcctgc tacatcgacc gaccgttcag caacgccttt ccggtgttct tcgagccggt       120
     tgaggacatc gctggggtac cggtgatttg cgatgaccgg atcaaccagc tctcgtttcc       180
     cggaccgttc ttcccgcggt ggtggaatag gccatcggtc gactgcatca atcgtccgga       240
     tgagcagatc ttccgagaac gtgacgaact gaccgagctg tttcaatcaa gagaagataa       300
     cgaagccaac accattgtct gtgacgcctg cctgatgtgg cgttgtggcg aggaagccga       360
     acgactgatc tttcggaaca tcaagctcag gtctgagata caagcgcgga tcgacgactt       420
     gtatgagaaa cattttagcg gccatagcat cattggcgtt catgttc                     467
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