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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168379; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168379;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. CH2310 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. CH2310
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. CH2310"
FT                   /host="Lupinus sp."
FT                   /strain="CH2310"
FT                   /mol_type="genomic DNA"
FT                   /country="Peru"
FT                   /db_xref="taxon:353501"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L3"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L3"
FT                   /protein_id="CAJ44638.1"
FT                   /translation="LASAWRYAKRTERTLAIDWRGSCYLDQPFTNAFQVFFEPVQAIDG
FT                   VRVICDDQINQVSFPGPFFPRWWNKAPIDCVYRPDEQILRESDELGRLFQSAEDVDAKT
FT                   VVCDACLMWRCDQDAERQIFRSIKPQSEIQTRIDGIYRECFEGHSIIGVHV"
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SQ   Sequence 467 BP; 106 A; 110 C; 136 G; 115 T; 0 other;
     gttggcgtca gcctggcgtt acgcaaagcg gactgagcgg acgttagcca tcgattggcg        60
     tggctcgtgt tatctcgatc agccattcac caacgccttt caagtgttct tcgaaccagt       120
     gcaagcgatc gatggcgtgc gagtcatttg tgatgaccag atcaatcagg tgtcatttcc       180
     ggggccgttc ttcccgcgct ggtggaataa agcaccgata gactgcgttt atcggccaga       240
     tgaacaaatt ctccgagaga gtgacgaact gggtcgactt ttccaaagtg ccgaagatgt       300
     cgatgcgaaa accgttgtgt gtgacgcctg cttgatgtgg cgctgcgatc aggacgccga       360
     acggcagata tttcggagca tcaagccgca atctgaaatt cagactcgaa ttgatggcat       420
     ttaccgggag tgctttgagg ggcacagtat aatcggggtt catgttc                     467
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