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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168378; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168378;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. C8 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. C8
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. C8"
FT                   /host="Lupinus mutabilis"
FT                   /strain="C8"
FT                   /mol_type="genomic DNA"
FT                   /country="Ecuador"
FT                   /db_xref="taxon:353500"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L2"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L2"
FT                   /protein_id="CAJ44637.1"
FT                   /translation="LASAWQYARRTGRTLAIDWRGSCYLDQPFTNAFPVFFEPVQAING
FT                   VRVICDDQINQMSFPGPFFPPWWNKAPIDSVYRPDEQIFQERDELDQLFQSPEDVDANT
FT                   VVCDACLMWRCDEDAERQIFRTIKPQPAIRARIDAIYQEHFEGHSIIGVHV"
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SQ   Sequence 467 BP; 108 A; 120 C; 128 G; 111 T; 0 other;
     gttggcatca gcgtggcaat acgcaaggcg gaccgggcgt acgttggcaa tcgattggcg        60
     tggctcgtgt tatctcgatc agccattcac caacgccttt ccagtgttct tcgagcctgt       120
     tcaagccatc aacggggtac gcgtcatttg cgatgaccag atcaatcaaa tgtcatttcc       180
     tgggccgttc ttcccaccct ggtggaataa ggcgccgata gatagcgttt atcggccaga       240
     tgaacagatc ttccaggagc gtgacgagct ggatcaactg ttccaaagtc cggaagacgt       300
     cgacgctaac actgtagtgt gtgacgcctg cttaatgtgg cgctgcgatg aggatgctga       360
     acggcagatt ttccggacga tcaaacccca gccggcaatt cgggctcgaa ttgatgccat       420
     ttaccaagag cactttgagg gacacagcat aatcggagtt catgttc                     467
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