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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168376; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168376;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. BLUT1 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. BLUT1
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. BLUT1"
FT                   /host="Lupinus albus"
FT                   /strain="BLUT1"
FT                   /mol_type="genomic DNA"
FT                   /country="Spain:Canary Islands"
FT                   /db_xref="taxon:353511"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9L0"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9L0"
FT                   /protein_id="CAJ44635.1"
FT                   /translation="LASAWSYAQRTGRTLVIDWRGSCYVDQPFSNAFPVFFEPVEDIAG
FT                   VPVICDDRVNQLSFPGPFFPRWWNRPSIDCINRPDEQIFRERDELTELFQAREDNEANT
FT                   IVCDACLMWRCGEEAERLIFRNIKLRSEIQARIDALYEEHFSGHSIIGVHV"
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SQ   Sequence 467 BP; 94 A; 128 C; 140 G; 105 T; 0 other;
     gctggcgtcg gcctggtcgt acgcgcagcg gaccgggcgg acgctcgtca ttgactggcg        60
     cggttcctgt tacgtcgacc aaccgttcag caacgccttt ccggtgttct tcgagccggt       120
     tgaggacatc gctggagtgc cggtgatttg cgatgaccgg gtcaaccagc tctcgtttcc       180
     cggaccgttc ttcccgcggt ggtggaatag gccatcgatc gactgcatca atcgcccgga       240
     tgagcaaatc ttccgagaac gtgacgaact aaccgagctg ttccaggcaa gagaagataa       300
     cgaagccaat accattgtct gtgacgcttg cctgatgtgg cgttgcggcg aggaagccga       360
     acgactgatc tttcggaaca tcaagctcag gtctgagatt caagcgcgga tcgacgcctt       420
     gtatgaggag cactttagcg gccatagcat cattggcgtt catgttc                     467
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