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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM168375; SV 1; linear; genomic DNA; STD; PRO; 467 BP.
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AC   AM168375;
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DT   15-MAY-2007 (Rel. 91, Created)
DT   15-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Bradyrhizobium sp. BLUH1 partial nodZ gene for fucosyltransferase
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KW   fucosyltransferase; nodZ gene.
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OS   Bradyrhizobium sp. BLUH1
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
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RN   [1]
RP   1-467
RA   Moulin L.;
RT   ;
RL   Submitted (05-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Moulin L., LSTM (IRD/CIRAD/INRA/AGROM/UMII), Institut de Recherche et
RL   Developpement, TA10/J Campus de Baillarguet, 34398 Montpellier cedex 5,
RL   FRANCE.
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RN   [2]
RA   Stepkowski T., Hughes C.E., Markiewicz L., Gurda D., Chlebicka A.,
RA   Moulin L.;
RT   "Phylogenetic analyses of nodulation genes reveal biogeographic pattern
RT   reflecting the origin of lupin nodulating Bradyrhizobium strains";
RL   Unpublished.
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RN   [3]
RX   DOI; 10.1128/AEM.02125-06
RX   PUBMED; 17400786.
RA   Stepkowski T., Hughes C.E., Law I.J., Markiewicz L., Gurda D.,
RA   Chlebicka A., Moulin L.;
RT   "Diversification of lupine Bradyrhizobium strains: evidence from nodulation
RT   gene trees";
RL   Appl. Environ. Microbiol. 73(10):3254-3264(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..467
FT                   /organism="Bradyrhizobium sp. BLUH1"
FT                   /host="Lupinus angustifolius"
FT                   /strain="BLUH1"
FT                   /mol_type="genomic DNA"
FT                   /country="Spain:Canary Islands"
FT                   /db_xref="taxon:230097"
FT   CDS             <1..>467
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="nodZ"
FT                   /product="fucosyltransferase"
FT                   /db_xref="GOA:A5A9K9"
FT                   /db_xref="InterPro:IPR008716"
FT                   /db_xref="UniProtKB/TrEMBL:A5A9K9"
FT                   /protein_id="CAJ44634.1"
FT                   /translation="LASAWSYAQRTGRTLVIDWRGSCYVDQPFSNAFPVFFEPVEEIAG
FT                   VPVICDDRLNQLSFPGPFFPPWWNRPSIDCINRPDEQIFRERDELTELFQAGDDNEANT
FT                   IVCDACLMWRCGEEAERLIFRNIKLRSEIRARIEDLYEQHFNGHSIIGVHV"
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SQ   Sequence 467 BP; 97 A; 124 C; 135 G; 111 T; 0 other;
     gttggcatca gcctggtcgt acgcgcagcg gaccgggcga acgctcgtta ttgactggcg        60
     cggttcctgt tatgtcgacc aaccgttcag caatgccttt ccggtgttct tcgagccggt       120
     tgaagagatc gctggcgtgc cggtgatttg cgatgacagg ctcaaccagc tctcgtttcc       180
     cggcccgttc ttcccgccgt ggtggaatag gccatcgatc gactgtatca atcgtccgga       240
     cgagcagatc ttccgagaac gtgacgaact gactgagctg ttccaagcag gagacgataa       300
     cgaggccaac accattgtct gtgacgcttg cctgatgtgg cgttgtggtg aggaagccga       360
     acgactgatc ttccgaaaca tcaaactcag gtctgagatt cgagcgcgga tcgaggactt       420
     gtatgagcaa cactttaacg gccatagtat catcggcgtt catgttc                     467
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