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EBI DbfetchID AL939104; SV 1; linear; genomic DNA; STD; PRO; 299050 BP. XX AC AL939104; AL109747; AL109949-AL109950; AL109962; AL109972-AL109973; AC AL109987; AL109989; AL110470; AL117322; AL117385; AL121854; AL590984; AC AL732393; XX DT 25-OCT-2002 (Rel. 73, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Streptomyces coelicolor A3(2) complete genome; segment 1/29 XX KW . XX OS Streptomyces coelicolor OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Streptomycineae; Streptomycetaceae; Streptomyces. XX RN [1] RP 1-299050 RA Bentley S.D.; RT ; RL Submitted (09-MAY-2002) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Streptomyces sequencing team, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA E-mail: RL sdb@sanger.ac.uk XX RN [2] RX DOI; 10.1038/417141a RX PUBMED; 12000953. RA Bentley S.D., Chater K.F., Cerdeno-Tarraga A.M., Challis G.L., RA Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D., RA Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A., RA Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S., Huang C.H., RA Kieser T., Larke L., Murphy L., Oliver K., O'Neil S., Rabbinowitsch E., RA Rajandream M.A., Rutherford K., Rutter S., Seeger K., Saunders D., RA Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A., RA Woodward J., Barrell B.G., Parkhill J., Hopwood D.A.; RT "Complete genome sequence of the model actinomycete Streptomyces coelicolor RT A3(2)"; RL Nature 417(6885):141-147(2002). XX DR EMBL-CON; AL645882. XX FH Key Location/Qualifiers FH FT source 1..299050 FT /organism="Streptomyces coelicolor" FT /strain="A3(2)" FT /mol_type="genomic DNA" FT /db_xref="taxon:1902" FT misc_feature 1..21653 FT /note="TIR-L. Left hand chromosome end terminal inveretd FT repeat." FT RBS 435..440 FT CDS 446..1123 FT /transl_table=11 FT /gene="SCO0001" FT /gene_synonym="SCEND.02c" FT /product="hypothetical protein" FT /note="SCEND.02c, unknown, doubtful CDS, len: 225aa;" FT /db_xref="UniProtKB/TrEMBL:Q9FBQ0" FT /protein_id="CAD30875.1" FT /translation="MTGHHESTGPGTALSSDSTCRVTQYQTAGVNARLRLFALLERRAC FT PRARRTTWWPGRSARWWSWTAWRRLLGVCCVRGRLGRRRDGGERGPGGHRGPGLATARR FT RSGGATELAVHCADVRQRERADLVRLEGFVRESVLPRAHPHTTARRRVLEVLGEAGSLC FT TARTVNSDEDYILCTLGVGHYDPDDQPPFKDGKPGWQRAGASIWNGSGAACIPHAAIEG FT PRK" FT RBS 1238..1243 FT CDS 1252..3813 FT /transl_table=11 FT /gene="SCO0002" FT /gene_synonym="SCEND.01c" FT /gene_synonym="SCJ24.01c" FT /gene_synonym="SC8E7.42c" FT /product="hypothetical protein" FT /note="SCEND.01c, unknown, partial CDS, len: >27aa; FT strongly similar to TR:AAF36550 (EMBL:AF194023) FT helicase-like protein from Streptomyces lividans (881 aa) FT fasta scores; opt: 114, z-score: 206.0, E(): 0.00052, 80.0% FT identity in 25 aa overlap." FT /note="SCJ24.01c, unknown, partial CDS, len: >457aa; FT strongly similar to TR:AAF36550 (EMBL:AF194023) FT helicase-like protein from Streptomyces lividans (881 aa) FT fasta scores; opt: 2191, z-score: 2490.1, E(): 0, 72.5% FT identity in 458 aa overlap." FT /note="SC8E7.42c, partial CDS, unknown, len:> 431 aa. FT Highly similar to Streptomyces lividans FT TR:AAF36550(EMBL:AF194023) helicase-like protein found in FT the chromosome terminal region (881 aa), fasta scores opt: FT 1940 z-score: 2170.3 E():0 66.9% identity in 438 aa FT overlap." FT /db_xref="GOA:Q8R6K2" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q8R6K2" FT /protein_id="CAD30876.1" FT /translation="MGVSATGSGKTITTAACALEYFPEGRILVMVPTLDLIVQSAQSWR FT RVGHRAPMVAVCSVDKDEVLEQLGVRTTTNPIQLALWAGTGPVVVFATYASLVDREDPA FT DVTGRRTVPGPLESALAGGERLYGQRMAPFDLAILDEGHMTAGDMGRPWAAIHDNSRIP FT VDFRLYLTATPRILAAPRPQRGRDGRELVIASMEDDSSTYGTRIFDLGLAEAVERSILA FT GFEIDVLEIRDPDPILGLSEDALRGRRMALLQAALLEHAAQQNLHTTMVFHQRVEEAAA FT FAEQMPRTAAELYTAEASAAALAEAAELPASSIDAELYELEEGRHVPPDRVWADWLCGD FT HPIAHRRAVIQRFANGIDAQNRRVHRAFLSSVRALGVGVDIAGLRGVEAVCIVGSRSSQ FT VDVVQNIGRALRPNPDGTTKTARIIIPVFLQPGEDPKDMVASASYQPLVDILQALRSHS FT ERMVDQLASRALTRGTERRRIHVRPAPAAGPENGDMPEETSQTQQEVDRVTSVVVNFAS FT PRDAADIAALTRCRVIRPQSLVWLEGYQALVRWRAENGITGLYAVPYDIETEVGTTKGY FT PLGRWVHQQRRAHRAGELDPHRKELLDDAGMVWEPGDEAWENKLAAFRSYRRAHGHLAP FT RQDAVWGEGEAMVPIGQHLANLRRKGAKNGLGKDPERAAERAAQLAAIDPDWNCPWPLD FT WQRHYRVLADLVDADGVLPAIDPGVLFEGDDIGRWLTRQREASTWTQLSAEQQERLTAL FT GVTPVERPAPAPAAPRSTKGPSKAKQSFQRGLAALAQWVEREGADRPVPRGHAEEIAVD FT GEADPVIIKLGVWVSNTRARRDKLTAEQLNALRGLGMEWAA" FT CDS 3869..6220 FT /transl_table=11 FT /gene="SCO0003" FT /gene_synonym="SC8E7.41c" FT /product="putative DNA-binding protein." FT /note="SC8E7.41c, possible DNA-binding protein, len: 783 FT aa. Contains a putative helix-turn-helix motif situated FT between residues 69..90 (+3.17 SD)." FT /db_xref="GOA:Q9FBV4" FT /db_xref="InterPro:IPR005114" FT /db_xref="UniProtKB/TrEMBL:Q9FBV4" FT /protein_id="CAD30877.1" FT /translation="MTDPFSPWPVAGVVRLAPLAGETTMSFVNRLAARYNVTVTGLLSA FT MAGPGVRGVWGRGCLVGEVFLASAVRHQLASLCQVSESHLSRALPSWDEGADAKANGEQ FT PNVRFASGSAVPAVMLGCRLCTAARTGAACSARLYSDLRSRICIRHQCWSLDSLALDRV FT TLVEGQVGLAGLPEVIRAHQSLLPLLRRKGSCENAFAVAQAVVASWWDVHWRDEVLWPA FT RLGRVCADLPEGEVAVLARDVVTYPEAVAVTTVLCDRLWRQRVLEDTHGQMPHTLAEVP FT RLLTELARRLGRPWLVEQLAASSAGALFAWVRACVRRERGAVPEEDVWAVPVAHRPRGL FT AAQVRELRLQHAGNAPVGGSLSRAEQAYRVGLAHAHSYAARHGHLAVPKYGRHEGFALG FT AWLANQRTGVAALPIERAQALHRIDPWWNGPWPISWRRTYHRALVHVRKHGLVDATAGF FT PGTSLALGEWLHEQCSRYDDLHVGQQRLLADLGIRPAHARSAHPRRKSLALAFAAGLDY FT ARAFAAVHGHLATSKSTRQDGFPLGQWLMSQRSRARMAEKETDRSRALSAIDPWWNPPW FT PLAWQRAYHHARKQCGSNQLLVPGDGFAGVGAAAASWLYAQCALFEELHPRQQGLLREI FT GITAEAAQARQTARYHRTGARIDFAVGLAHARDYINIHGHLALPHPVQHNGFPLGRWLA FT SKRGEAGAHARRTPAPWPGMQALAALDPWWFPPWAFAWQRDYHRLRLLLAAGLEPPPKL FT RSWISEQLTQRHTLLPGQQRLLQELKDLPV" FT CDS 6226..7173 FT /transl_table=11 FT /gene="SCO0004" FT /gene_synonym="SC8E7.40c" FT /gene_synonym="SC1C9.01" FT /product="hypothetical protein (fragment)" FT /note="SC8E7.40c, unknown, len: 315 aa." FT /note="SC1C9.01, hypothetical protein (fragment), len: >64 FT aa; identical to C-terminal part of TR:Q9FBV5 FT (EMBL:AL391338) Streptomyces coelicolor hypothetical 33.7 FT kDa protein SC8E7.40c, 315 aa, situated on the opposite end FT of the chromosome" FT /db_xref="UniProtKB/TrEMBL:Q93S15" FT /protein_id="CAD55410.1" FT /translation="MRHGIAAAVHPFGWRIRITAFSSPPWTWLLSVEGHEHSRRVQQAA FT AGGDGAGIEAAFVTAAGRLTQLQWDQAAASVQFEDVAPVSAFPVVPGRRWGPGWWWSAT FT TGRHVVHGLAAMRTQLMVLDRNPDVTGLAARPVRLLWRDTDGRVRSWVPQLFARYADGT FT GLLADCPSSPTAGGDGAQRARMVLEAACALVGWAYRRLEPPPPVVAANLRWLAGYRHPR FT NQGPPGLRAALAEAFAGLRPLADGAAAVGDPLQVLPAVYHALWCGHLTTPLDEPLHEET FT LVCADAERGGGGVEERLGAGGGRGRGERSGRHPR" FT CDS 7187..9307 FT /transl_table=11 FT /gene="SCO0005" FT /gene_synonym="SC1C9.02" FT /product="putative transposase" FT /note="SC1C9.02, possible transposase, len: 706 aa; FT identical to TR:Q9FBV6 (EMBL:AL391338) Streptomyces FT coelicolor putative transposase SC9E7.39c, 706 aa, situated FT on the opposite end of the chromosome. Contains Pfam match FT to entry PF00665 rve, Integrase core domain" FT /db_xref="GOA:Q9FBV6" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:Q9FBV6" FT /protein_id="CAD55411.1" FT /translation="MVEVGAHVAYRGQTWQVAALQGQQVYLLQEDGTETRLLLGRLFAD FT PGFEVVGARAPDTVPQWGLFETVPLAAQQRALAWLPHIREVETGWPHPEGSREGQAMRP FT EYDPERWTLAQRDAAKAKELAALGFARVTRTTVERMRHGYRKQGLWGLVDKRAVPARGR FT HPTGYADERVVAAVLEALRRQRGRSKGTVKGLQVLVGQILEDTHGRGVVEMPSRSTFYR FT LVSVLADPADRPGRPARTATAPARASSAPVVLRPGEQVQIDTTRLDIMAILEDGSLGRP FT ELTIAVDVATRSILAAVLRPYSTKAVDAALLLAEMAVPHPARPTWPSALHLSRAEVPYE FT RMLSLDERLEGAAARPVVVPETIVVDRGKIYLSQGFVAACEMLGVSVQPAPPRRPQAKA FT VVERTFGAINDLFCQHVAGHTGSNPQRRGLTTAAETRWTIPQLQDFLDEWITCGWQNRP FT HDGLRHPVLPKTALTPNQMWAALITVSGYVPVPLSGADYLELLPVRWQPITERGIRLDY FT RTYNHDILDPHRGQRSPVASKDGKWEVHHNPHDARQIFVRLTDGQLHEIPWIHRDHVHQ FT PFNEAIWRHVQAEVEQRGDRDQHEADLADALDQLLRRTRHLAETEQKTRRRRATRSGTA FT AQLPDLPGQRRPFDAETAPAPAPDWSESLDDLISVDTAAQTGTSEMEGASVPPAEAGGY FT GLWDAEAEAEQW" FT misc_feature 8231..8623 FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 47.20, E-value 1.8e-12" FT CDS 9304..10410 FT /transl_table=11 FT /gene="SCO0006" FT /gene_synonym="SC1C9.03" FT /gene_synonym="SCJ30.01" FT /product="putative ATP/GTP-binding protein" FT /note="SC1C9.03, possible ATP/GTP-binding protein FT (fragment), len: >223 aa; identical to N-terminal part of FT TR:Q9FBV7 (EMBL:AL391338) Streptomyces coelicolor putative FT ATP/GTP-binding protein, 368 aa; situated on the opposite FT end of the chromosome. Contains match to Prosite entry FT PS00017 ATP/GTP-binding site motif A (P-loop)" FT /note="SCJ30.01, partial CDS, unknown, len: >183 aa; weakly FT similar to the C-terminal half of suspected transposition FT related nucleotide binding proteins eg. TR:Q57461 FT (EMBL:U49101) TniB delta1 from plasmid pVS1 (286 aa) fasta FT scores; opt: 133, z-score: 170.1, E(): 0.041, (29.7% FT identity in 148 aa overlap)." FT /db_xref="GOA:Q9FBV7" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q9FBV7" FT /protein_id="CAD55412.1" FT /translation="MNASPGTSDTPAGGSPSTAHRPPSAAASTDGDAPDAQPQAVATWD FT GFQAFATTPAAAPPPPGTPHRSLEERLAYHSRFVTVRTPAIDALAKNVRTLMILGRHQA FT VTARPSLIVTGPAGAGKTTALLQVGRACHLAHTRRHGAAATAGQAPVAYVLVPPAASAK FT TLAIEFARYLGIPVTAGMSQAQITGAVCHTYTAARVQLVMIDEIHRLNPRTTTGAQSAD FT LIKDLTERIGATFVYAGIDVTTTPLFTGVRGAQLAGRASLIDCAAFPSRLGDQEPFRDL FT ITAMESALDLRHHRPGTLPRLAPYLHERTAGRIGSLARLIRQAAITALLDGTERITKTT FT LDAIRLDHLAEQHYQPRARPRSRNTSTP" FT misc_feature 9646..9669 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(10554..11000) FT /transl_table=11 FT /gene="SCO0007" FT /gene_synonym="SCJ30.02c" FT /product="hypothetical protein" FT /note="SCJ30.02c, unknown, len: 148 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1Y7" FT /protein_id="CAB53297.1" FT /translation="MCVVRGDKLRHGPGADGGSEPRVGGCLLVAWAHQPLWRRVGPGGV FT GGVVAAVAGAQGAGADGLLFGLEPLPVRGGLGAVGVARQGEVGQGARQVGEWESGEGGQ FT APGRVVIEVEFGCWQGAVAVEGDADAVKELGQRQLVGVGEPLPV" FT CDS complement(11010..11360) FT /transl_table=11 FT /gene="SCO0008" FT /gene_synonym="SCJ30.03c" FT /product="hypothetical protein" FT /note="SCJ30.03c, unknown, len: 116 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1Y6" FT /protein_id="CAB53298.1" FT /translation="MACVGEEDAEWVVRVACQAGQSEAVGDEGEGLAGVAVWPVREGGE FT CAGEGDGFRVDHQVAGHQGGGGAARGGQAGVGRAEPGQAGVPAVGEMLLVVVPAGGDSA FT RGGPGGEGAWVP" FT CDS complement(11617..11952) FT /transl_table=11 FT /gene="SCO0009" FT /gene_synonym="SCJ30.04c" FT /product="hypothetical protein" FT /note="SCJ30.04c, improbable CDS, function unknown, len: FT 111 aa; predicted by GC frameplot and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1Y5" FT /protein_id="CAB53299.1" FT /translation="MCGRRPFETQLSECCQLLLGELVPPRPGVRYPYTQFHDYRLHPAV FT DHDLFAVAARNRPMAFPFDPLCESRETSLESLLRLSRALRRATSCRTGQRCFGGLDTQC FT GQPLPLL" FT repeat_region 12078..12122 FT /note="Inverted and repeated at 3791-3835bp." FT CDS 12366..13457 FT /transl_table=11 FT /gene="SCO0010" FT /gene_synonym="SCJ30.05" FT /product="hypothetical protein (putative secreted protein)" FT /note="SCJ30.05, unknown (putative secreted protein), len: FT 362 aa; region of similarity to TR:CAB41280 (EMBL:AL049707) FT putative transferase from Streptomyces coelicolor (448 aa) FT fasta scores; opt: 411, z-score: 409.4, E(): 1.9e-15, FT (32.8% identity in 274 aa overlap). Contains leucine TTA FT codon, possible target for bldA regulation. Note large FT overlap with downstream CDS." FT /db_xref="UniProtKB/TrEMBL:Q9S1Y4" FT /protein_id="CAB53300.1" FT /translation="MTGRTLRFLGYALATGCGSLLLKHFVIAPGPPVGHIPWVLRLLIM FT LGILEGGWLVFRASRRVVVRGRRHRVRVLTGFEELRGERYILYLRPFALDIRMSLPPPE FT APGWWMRSPYELPGLTMEDFLVRQFTRHGRVVAVGEPGEELPLLGAQRGYLPLEGWERT FT VSELIQGAHSVLMSVAPGPGTVWEFTEALRTMPPERLVLMVCCGPEEYDAFRSAVVEKY FT AVRKSEEPGSTWAPLPRLPDCPARPPASKREWQSPLRAFVTFDQQWQPSLHWFVVTVPR FT IRHVWTMRRLVRERIDALVGAWAALPQRQASPGTIPPPAPVVTTPPPPPVLSPLPQQPL FT LGSTVVGLNVRPPERRTRRRGRQ" FT CDS complement(13214..14023) FT /transl_table=11 FT /gene="SCO0011" FT /gene_synonym="SCJ30.06c" FT /product="hypothetical protein" FT /note="SCJ30.06c, unknown, len: 269 aa; predicted amino FT acid usage. Note large overlap with downstream CDS." FT /db_xref="UniProtKB/TrEMBL:Q9S1Y3" FT /protein_id="CAB53301.1" FT /translation="MHRELTPRAARAEGEAPPSIPTLHRAIRRDLTPGERTGLAGGERE FT ACKHDEFLARTRGWPEPGVGDRPHADPGAGRCDGKPPRPSITWFTDCATNAITGVAVTP FT GHPSRKSVLAALRSADLRDGPHRRCGARFVMVRSNWQLNAAKFEAIGAFEQRLPAYAHS FT KAEWAALGEGRDLPPTHVEQWVPVNFHCRPRRRVLRSGGLTFSPTTVLPSRGCCGSGER FT TGGGGGVVTTGAGGGIVPGEACRCGRAAHAPTNASMRSRTSLRMVQT" FT misc_feature 13260..13262 FT /note="Leucine tta codon, possible target for bldA FT regulation." FT repeat_region 13648..13692 FT /note="Inverted and repeated at 2221-2265bp." FT CDS complement(14044..14454) FT /transl_table=11 FT /gene="SCO0012" FT /gene_synonym="SCJ30.07c" FT /product="hypothetical protein" FT /note="SCJ30.07c, unknown, len: 136 aa; predicted by GC FT Frameplot, Hidden Markov model and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1Y2" FT /protein_id="CAB53302.1" FT /translation="MEACAPWRPISAGEARERDAAGLPHVVVYREPGREAPLEVRLVSR FT QDHHVGLWAYDAQDRRSHDLDMRLLDDPSRLLRRYSVSWHCTGPETAEFDKAGPRITVD FT LMQEHQRLHGDVLTGLRAPPEPPPSLRPLPHR" FT CDS complement(14739..15029) FT /transl_table=11 FT /gene="SCO0013" FT /gene_synonym="SCJ30.09c" FT /product="conserved hypothetical protein" FT /note="SCJ30.09c, unknown, len: 96 aa; predicted by GC FT Frameplot, Hidden Markov model and amino acid usage; FT similar to the C-terminal region of the SCP1 plasmid borne FT TR:Q9ACW6 (EMBL:AL590464) Streptomyces coelicolor conserved FT hypothetical protein SCP1.185, 184 aa; fasta scores: opt: FT 442 Z-score: 592.9 E(): 2.1e-25; 84.615% identity in 78 aa FT overlap" FT /db_xref="UniProtKB/TrEMBL:Q9S1Y0" FT /protein_id="CAB53304.1" FT /translation="MRRLPRRHASNIALPGNDFWLLDDRLVQFHHFTGTGTGDRAPDGK FT ERTTDPAAVALCHAAFETVWERAVPHEKYPVQAHRVEHRERIPVVQCTGGP" FT CDS complement(15317..15595) FT /transl_table=11 FT /gene="SCO0014" FT /gene_synonym="SCJ30.10c" FT /product="conserved hypothetical protein" FT /note="SCJ30.10c, unknown, len: 92 aa; predicted by GC FT Frameplot, Hidden Markov model and amino acid usage; highly FT similar to the SCP1 plasmid borne TR:Q9ACW7 (EMBL:AL590464) FT Streptomyces coelicolor conserved hypothetical protein FT SCP1.184, 92 aa; fasta scores: opt: 499 Z-score: 653.4 E(): FT 9.2e-29; 81.522% identity in 92 aa overlap. Contains FT leucine TTA codon, possible target for bldA regulation" FT /db_xref="UniProtKB/TrEMBL:Q9S1X9" FT /protein_id="CAB53305.1" FT /translation="MALRFVGIAPRTGGEGSPTVWVEEESADLVLQGEEAGALLQALVG FT STEWVAGHRTGIPAYERVIRIPFRMVQILREACDAAERASADHRDVR" FT misc_feature complement(15587..15589) FT /note="Leucine tta codon, possible target for bldA FT regulation." FT CDS complement(16070..17302) FT /transl_table=11 FT /gene="SCO0015" FT /gene_synonym="SCJ30.11c" FT /product="putative Na+/H+ antiporter" FT /note="SCJ30.11c, possible Na+/H+ antiporter, len: 410 aa; FT similar to many eg. TR:Q56580 (EMBL:D25214) Na+/H+ FT antiporter from Vibrio alginolyticus (383 aa) fasta scores; FT opt: 536, z-score: 594.7, E(): 9.1e-26, (38.5% identity in FT 384 aa overlap). Also similar to TR:CAB38501 FT (EMBL:AL035636) putative Na+/H+ antiporter from FT Streptomyces coelicolor (474 aa) fasta scores; opt: 968, FT z-score: 1067.2, E(): 0, (52.2% identity in 404 aa FT overlap). Contains possible hydrophobic membrane spanning FT regions" FT /db_xref="GOA:Q9S1X8" FT /db_xref="InterPro:IPR004670" FT /db_xref="UniProtKB/Swiss-Prot:Q9S1X8" FT /protein_id="CAB53306.1" FT /translation="MSAPSRITAALRSDAVGGSLLIGAAVIALIWANSPLSHSYEALRS FT FTFGPSALHLNLSVETWAADGLLAVFFFIVGNELKQELVHGELRDPRRAALPIAAALGG FT VAVPALVFLAFTLGSGGEAAGGWGIPMATGIAFAVAVLAVVGRHLPTPLRTFLLTLATV FT DDMSAVLVIAVACTSGINFTALALAAVGLAVFGYLQNGSGRAVARVRAMVPAWLLFVPL FT AAVVWALMHACGVHATIAGVVMGLLMRTRPQGAERVSPSHRAEEVLRPFSAGIALPLFA FT LMSAGVSLAGAGGFVTSAITWNVLAGLLVGKVVGIFGGTWPTSRLTSAHLNPLLGWADI FT AGIAVLGGIGFTVSLPIAELSSTSQAHLTDAKGAILLASTTAALLAALLLGRRSRHHQR FT LARQAAQQATT" FT CDS 17715..17918 FT /transl_table=11 FT /gene="SCO0016" FT /gene_synonym="SCJ30.12" FT /product="hypothetical protein" FT /note="SCJ30.12, unknown, len: 67 aa; predicted by GC FT Frameplot, Hidden Markov model and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1X7" FT /protein_id="CAB53307.1" FT /translation="MTTPSDDTARPVPAVLPAGPVPGHPQQEAAARLWRRRQTHTGRVY FT LLGPPSHRGIEDGGVEAAEHRV" FT CDS 17919..18263 FT /transl_table=11 FT /gene="SCO0017" FT /gene_synonym="SCJ30.13" FT /product="hypothetical protein" FT /note="SCJ30.13, unknown, len: 114 aa; predicted by GC FT Frameplot, Hidden Markov model and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1X6" FT /protein_id="CAB53308.1" FT /translation="MRAPEHVRPVDGVDYNQVSTGPLPPAPPTPTGREGLWERRPSGWV FT LAKVRSGRGPARGVPHAPECAEAPEGVPLLDVRRALDVAEKPGTQLCTLCGCAQELTPL FT LSAFDHITDS" FT CDS complement(18485..19351) FT /transl_table=11 FT /gene="SCO0018" FT /gene_synonym="SCJ30.14c" FT /product="hypothetical protein" FT /note="SCJ30.14c, hypothetical protein, len: 228 aa; FT predicted by GC Frameplot, Hidden Markov model and amino FT acid usage. Has regions of similarity to SCJ4.39 FT hypothetical protein from the overlapping Streptomyces FT coelicolor cosmid J4 (EMBL:AL109950) fasta scores; opt: FT 334, z-score: 359.9, E(): 8.2e-15, (41.6% identity in 245 FT aa overlap)." FT /db_xref="InterPro:IPR005561" FT /db_xref="UniProtKB/TrEMBL:Q9S1X5" FT /protein_id="CAB53309.1" FT /translation="MGQSSCRPKEVTAQVTSQAPWPGTGGVYWSREELEARNRRLAHQG FT VAAAEDVLVKRYGLGVVGEGFELLRAVSQQFNVKLHTLADAVVRVPAPDAEVRVWFPGR FT RRYSPPRLPALALEPGSRGSQGAVLKAVLHRVLSITQTPMGNVQLKDGHRLHLTRHTGL FT NTYFTEFFAFVDNDTTSCAQAAAQHRQVTVRDVAGADVFDEASRYAILQSGSRAAHSVP FT LTSSRGAVMGMVSSHHERPLTAFSTAQLAALQQTGTDAGRWLSWHWNTVVLDALERLHT FT TAIRRLH" FT CDS complement(19517..19771) FT /transl_table=11 FT /gene="SCO0019" FT /gene_synonym="SCJ30.15c" FT /product="hypothetical protein" FT /note="SCJ30.15c, improbable CDS, function unknown, len: FT 115 aa; predicted by amino acid usage." FT /db_xref="GOA:Q9S1X4" FT /db_xref="UniProtKB/TrEMBL:Q9S1X4" FT /protein_id="CAB53310.1" FT /translation="MSQPEAAHYLGIALTRVGMLIANASPDTGRRPGRAGRSDNRQRRG FT REDLASGRVNPCESHPPPEGHNQLVLIDDPQVLTIAPGL" FT repeat_region 19911..19973 FT /note="possible inverted repeat bounding insertion FT sequence." FT misc_feature 19911..21168 FT /note="possible insertion sequence." FT CDS 19974..21620 FT /transl_table=11 FT /gene="SCO0020" FT /gene_synonym="SCJ4.01" FT /gene_synonym="SCJ30.16" FT /product="putative transposase" FT /note="SCJ4.01, partial CDS, possible transposase, len: FT >183 aa; similar to TR:Q9R2U8(EMBL:AL133236) putative FT transposase from Streptomyces coelicolor (501 aa) fasta FT scores, opt: 267 z-score: 317.3 E(): 3.4e-10 33.9% identity FT in 168 aa overlap and TR:O69919 (EMBL:AL023861) FT hypothetical protein from Streptomyces coelicolor (188 aa) FT fasta scores; opt: 419, z-score: 501.4, E(): 1.4e-20, FT (45.9% identity in 159 aa overlap). Overlaps and extends FT into CDS SCJ30.16 on the adjoining cosmid." FT /note="SCJ30.16, partial CDS, possible transposase, len: FT >397 aa; varying regions and lengths of similarity to many FT eg. SW:TRA1_BORPA transposase from IS1001 of Bordetella FT parapertussis (406 aa) fasta scores; opt: 203, z-score: FT 236.1, E(): 8.7e-06, (28.4% identity in 215 aa overlap). FT Also contains short region of similarity to TR:O69919 FT (EMBL:AL023861) hypothetical protein from Streptomyces FT coelicolor (188 aa) fasta scores; opt: 248, z-score: 292.3, FT E(): 6.4e-09, (68.1% identity in 47 aa overlap). Contains FT possible helix-turn-helix motif (+4.11 SD) 308-329 aa. Also FT contains TTA leucine, possible target for bldA regulation." FT /db_xref="GOA:Q8CK71" FT /db_xref="InterPro:IPR002560" FT /db_xref="UniProtKB/TrEMBL:Q8CK71" FT /protein_id="CAD55413.1" FT /translation="MGSLLLCSVELVSLLPQLSDVHVVSVEVSDAVVAVYARTRSGEPA FT GCTGCGRLSEWCHSRYARRLADVTLAGRPLRIDLSVRRLYCENTTCPKVTFTEQVPGLT FT VRYQRRTSRLQSLVEDVGVVLAGRGGSRMLRILGIKLSRVALLSQLMRVPLPPLVTPQV FT LGVDDFALDGGTYGTLLVDATTRLPLTLWEGRDAKQLGRWLREHPGIDIVCRDGSLTYR FT QGITAGAPEAVQVSDRFHLWQGLSRRVQDIASAHRGCLPAALPTVSEDDHPPVEETTQN FT AAADSRAGRHAQSLFEAIQALTCTGRSHSSVARELGLDRRTVRKYARARTWQEVMRRPP FT RKPSMLDPYLDYLRQRWDDGQHSAKILHEELQTKGYLGHYQRVKMAVAPLRRGLPIDEP FT CERPPSPRETARWITTHPHRRSPHVNERLPRLLDHCPELKLTHDLVRRFATMLDNRDAA FT PLPGWLGDLKKSGLGPLVGFAGALHEDRHAVAQGITTPYNSGVNEGRITDVKLQKRLMA FT GRAGVRLLRHRVVLIAHLRRRHADRPTVPPR" FT misc_feature 20016..20018 FT /note="tta leucine, possible target for bldA regulation." FT misc_feature <21068..21650 FT /note="possible insertion sequence." FT misc_feature 21588..21650 FT /note="possible inverted repeat bounding insertion FT sequence." FT CDS 21617..22210 FT /transl_table=11 FT /gene="SCO0021" FT /gene_synonym="SCJ4.02" FT /product="hypothetical protein" FT /note="SCJ4.02, unknown, len: 197 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1X1" FT /protein_id="CAB52936.1" FT /translation="MISAYENLARATFLPQLRTDERPQLWPQAAGQSISVEIDDPSRDT FT HAMSPSTSSEPIERGWDQPWYRVRTENFQASFLPSDGEDLNEVCNVDVFVTLKDGSCWT FT ATVFTVAEVERLMKLWADTDEALGGRYFWVSDGLIVKDPGIDGMTGVIAGLIENGEFSE FT IFQRVIRRSAAGSVVGGQATSFSRSMALRRFLSR" FT CDS complement(join(22156..22299,22290..22430,22624..>22761)) FT /transl_table=11 FT /gene="SCO0022" FT /gene_synonym="SCJ4.03c" FT /gene_synonym="SCO0023" FT /gene_synonym="SCJ4.04c" FT /gene_synonym="SCO0024" FT /gene_synonym="SCJ4.05c" FT /product="putative IS element ATP-binding protein" FT /note="SCJ4.03c, partial CDS, possible IS element FT ATP-binding protein, len: 47 aa; similar to regions of many FT eg. SW:ISTB_ECOLI IS element ATP-binding protein from FT Escherichia coli (265 aa) fasta scores; opt: 132, z-score: FT 207.1, E(): 0.00035, (53.8% identity in 39 aa overlap). FT Also similar to TR:O69925 (EMBL:AL023861) putative IS FT element ATP-binding protein from Streptomyces coelicolor FT (256 aa) fasta scores; opt: 224, z-score: 343.7, E(): FT 8.7e-12, (72.3% identity in 47 aa overlap)" FT /note="SCJ4.04c, partial CDS, possible IS element FT ATP-binding protein, len: 47aa; similar to regions of many FT eg. SW:ISTB_ECOLI IS element ATP-binding protein from FT Escherichia coli (265 aa) fasta scores; opt: 193, z-score: FT 314.5, E(): 3.7e-10, (55.3% identity in 47 aa overlap). FT Also similar to TR:O69925 (EMBL:AL023861) putative IS FT element ATP-binding protein from Streptomyces coelicolor FT (256 aa) fasta scores; opt: 273, z-score: 440.0, E(): FT 3.8e-17, (91.5% identity in 47 aa overlap)." FT /note="SCJ4.05c, partial CDS, possible IS element FT ATP-binding protein, len: 46aa; similar to regions of many FT eg. SW:ISTB_ECOLI IS element ATP-binding protein from FT Escherichia coli (265 aa) fasta scores; opt: 150, z-score: FT 245.0, E(): 2.7e-06, (43.5% identity in 46 aa overlap). FT Also similar to TR:O69925 (EMBL:AL023861) putative IS FT element ATP-binding protein from Streptomyces coelicolor FT (256 aa) fasta scores; opt: 250, z-score: 400.5, E(): FT 6e-15, (78.3% identity in 46 aa overlap)." FT /db_xref="GOA:Q8R5N1" FT /db_xref="InterPro:IPR002611" FT /db_xref="UniProtKB/TrEMBL:Q8R5N1" FT /protein_id="CAD30890.1" FT /translation="RLSRSSHHKTLDEYDFSFQPDLDPRKVRDLATLSFVEGRANAALL FT GVLVADEVGYQPLERAEARLVFQVISKRYEKGSIILASNKTFSEWGQVGPGFGDEVLAT FT ALLGRLLDHCDVISINGPGYRLRNRLKAIERENDVA" FT CDS 22843..23061 FT /transl_table=11 FT /gene="SCO0025" FT /gene_synonym="SCJ4.06" FT /product="putative IS element ATP-binding protein" FT /note="SCJ4.06, partial CDS, possible IS element FT ATP-binding protein, len: 46aa; similar to regions of many FT eg. TR:BAA78797 (EMBL:AP000342) NTP-binding protein from IS FT element of plasmid R100 (261 aa) fasta scores; opt: 113, FT z-score: 154.6, E(): 0.3, (36.4% identity in 55 aa FT overlap). Contains PS00017 ATP/GTP-binding site motif A FT (P-loop)" FT /db_xref="GOA:Q9S1W7" FT /db_xref="UniProtKB/TrEMBL:Q9S1W7" FT /protein_id="CAB52940.1" FT /translation="MDPAVIHTPATCEWGKEGLPLCLIGDSGTGKSHLLSALGTEASMA FT GYRASGTFRTRGDRALPGLGFLEHVPV" FT misc_feature 22915..22938 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 23316..23831 FT /transl_table=11 FT /gene="SCO0026" FT /gene_synonym="SCJ4.07" FT /product="putative secreted protein" FT /note="SCJ4.07, possible secreted protein, len: 171 aa; FT Contains possible N-terminal signal sequence. Also contains FT PS00013 Prokaryotic membrane lipoprotein lipid attachment FT site." FT /db_xref="UniProtKB/TrEMBL:Q9S1W6" FT /protein_id="CAB52941.1" FT /translation="MRRLGLSAVMISILAVTGCGGSQDGDAAAAKPAKSKAASASPATQ FT KSKAPERNLQQVERDLRFAVAPHKPQMQPLQSGSCIVHGVAPTRRVLSKAEFEAIVGRL FT QKRGWSPLGPLRYSDDETYGKMSYLRLQSGEWEISLGSAPMPSEMREAYAPNEGSIIAA FT ISWKCTGA" FT misc_feature 23340..23372 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(23977..24345) FT /transl_table=11 FT /gene="SCO0027" FT /gene_synonym="SCJ4.08c" FT /product="hypothetical protein" FT /note="SCJ4.08c, doubtful CDS, function unknown, len: 122 FT aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1W5" FT /protein_id="CAB52942.1" FT /translation="MGRAHRKDVFSVASSSRRMTWSAWGAREFCGVPDLPRTPVVAAAG FT LHVQPAAPGCPDPSQPFGHGVLVVGTTIGGRGSWPTPPAPAKVRRRAAVYEMPSRAVRP FT RAARLACGAPHVVPPWRR" FT CDS complement(24378..24521) FT /transl_table=11 FT /gene="SCO0028" FT /gene_synonym="SCJ4.09c" FT /product="hypothetical protein" FT /note="SCJ4.09c, doubtful CDS, function unknown, len: 47 FT aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1W4" FT /protein_id="CAB52943.1" FT /translation="MRRCGRAVQWLPGRVDSRQGVRLDGGPQPCPVQQQLGCQFGRSVS FT IA" FT CDS 24644..24943 FT /transl_table=11 FT /gene="SCO0029" FT /gene_synonym="SCJ4.10" FT /product="hypothetical protein" FT /note="SCJ4.10, unknown, len: 99 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1W3" FT /protein_id="CAB52944.1" FT /translation="MDRLVGQWHRTWEPTVRNASGVLEPPGVLWVAVKGWLDALLVGRH FT GATHPAPGSASATASCRGVRRGVGRGRSAPRPPGAGAGARQARTNGPPGAGPDE" FT CDS 25251..25871 FT /transl_table=11 FT /gene="SCO0030" FT /gene_synonym="SCJ4.11" FT /product="hypothetical protein SCJ4.11" FT /note="SCJ4.11, unknown, len: 206 aa; similar in its FT N-terminal region to the SCP1 plasmid borne TR:Q9ACQ7 FT (EMBL:AL590464) Streptomyces coelicolor putative secreted FT protein SCP1.261c, 167 aa; fasta scores: opt: 478 Z-score: FT 480.3 E(): 4e-19; 74.766% identity in 107 aa overlap" FT /db_xref="InterPro:IPR018271" FT /db_xref="UniProtKB/TrEMBL:Q9S1W2" FT /protein_id="CAB52945.1" FT /translation="MRSLRWVARAVEGHAATPGAAAPGLAAAVPAQAAGYSSALKIKGM FT QYDAPGRGPNKYSGGNTKNKYLTIKNYSKTAAVNLKDYTVKDAAGNACTFKNSHALQHG FT DYASQESQRPRRQHHLPRLTNQPERMTGRRTDTQQPAPPPRPGPLQLEANAPGQHAMTA FT ARAPYAREQAILGGWPGERGCSPATAAVAGAHLPVSGWRRRWR" FT CDS complement(25843..26385) FT /transl_table=11 FT /gene="SCO0031" FT /gene_synonym="SCJ4.12c" FT /product="hypothetical protein" FT /note="SCJ4.12c, unknown, len: 180 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1W1" FT /protein_id="CAB52946.1" FT /translation="MSDAFTVLWTHDVCRALRRAGRVGERPPVAFIGVHSSLPAWTGAG FT AGDEVYALHVNRREVFVVSRMRVIDRERHGCCGTAPATWEDPAYPGHHDWSMLGAEGCG FT ADPVHVDATPVRFDTPISGDLLARLTWRNRRGQTRQLKYVVDGRLENSVSLQGFYRLTP FT ESSAELADVTASAVSSR" FT CDS complement(26393..26452) FT /transl_table=11 FT /gene="SCO0032" FT /gene_synonym="SCJ4.13c" FT /product="hypothetical protein SCJ4.13c" FT /note="SCJ4.13c, unknown, len: 19 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1W0" FT /protein_id="CAB52947.1" FT /translation="MLMSHGGEVEEGACQCSFI" FT CDS complement(26527..28773) FT /transl_table=11 FT /gene="SCO0033" FT /gene_synonym="SCJ4.14c" FT /product="putative secreted neuraminidase" FT /note="SCJ4.14c, possible secreted neuraminidase FT (sialidase), len: 748 aa; similar to many, both prokaryote FT and eukaryote, egs. SW:NANH_MICVI sialidase precusor from FT Micromonospora viridifaciens (647 aa) fasta scores; opt: FT 274, z-score: 299.9, E(): 2.4e-09, (28.6% identity in 587 FT aa overlap) and TR:O35657 (EMBL:Y11412) G9 sialidase FT precusor from Mus musculus (Mouse) (409 aa) fasta scores; FT opt: 325, z-score: 358.5, E(): 1.3e-12, (26.6% identity in FT 425 aa overlap). Also similar to TR:Q9ZBW1 (EMBL:AL034443) FT putative neuraminidase from Streptomyces coelicolor (648 FT aa) fasta scores; opt: 479, z-score: 524.0, E(): 7.9e-22, FT (33.5% identity in 638 aa overlap). Contains possible FT N-terminal signal sequence." FT /db_xref="HSSP:1EUR" FT /db_xref="InterPro:IPR007132" FT /db_xref="UniProtKB/TrEMBL:Q9S1V9" FT /protein_id="CAB52948.1" FT /translation="MGAVGMTARPGPPRRVRRSSGGRRAASLTTVVAAVWAVLSALLLP FT AGVAAAAPVTRSQTTVFTEGEREAGATASYVCFRAPAVVKAADGTLLAFAEGRIGSCSD FT TASIDIVVKRYVNGAWSALQVVARHSAGHIYHNVTPVVDAASGRVVVLYTENYDHIHRI FT ASEDDGLHWTAADDISADVWSTAWGALYAGQMATGPASAIQLTHGRHAGRLVAGMTVRV FT APGAAPANLGGALIYSDDGGLTWRLGASSLGAEPAVGAQELSLFERGDGSLFVTARNEE FT GDSGTRDRAVYAVSGDQGLSFTSDFALLPDMDLPGTGIQASTLALREKNRDGYDRALFA FT APVGPNREDLTIRSSFDGGLTWQDAADGALVKDGYSAYSSMTVLGGGTFGILYEAGTTK FT QYQDIRFATFTEADLDLPAGAGSLTLNQNTGALATTSPEQLHLFAPTPAGDLGHWFEED FT DGTLKRGTWGTGIAGKTVAFNDAVQQHVLARGTDGSLIHRFWSTTGLSSQTWLAAGTVA FT GAPTGFVASGQQHAWVRMTDGRLLHTWWDAGTASLKQQAWAAAGTLAGDPVAVRYGEQQ FT HVWATGTDGRLHHWWWTKGPGIRHELWPGSARGAATALVQKGQLHVYAADPENRLTHWW FT WDSTDQVVKGQVLSTPTALAGPPISFVHGGQQHVFARITGNTLAHWWWDPTTGNNYAVW FT PGPISSDPVAQVVGDTQHVYGAASDGTLSHWWWNSAEGTKRETWGGSIATTSAW" FT CDS 29040..29519 FT /transl_table=11 FT /gene="SCO0034" FT /gene_synonym="SCJ4.15" FT /product="hypothetical protein" FT /note="SCJ4.15, unknown, len: 159 aa" FT /db_xref="InterPro:IPR005114" FT /db_xref="UniProtKB/TrEMBL:Q9S1V8" FT /protein_id="CAB52949.1" FT /translation="MPDLAGDLAAVLPPRPDTPGGEALPTDSGDVLRQGDILGRRVQSV FT RLGWDQLTSVQLWMCEQVLGIESAAEDEKPRRTRADKWALNYQAAKQFYEREGHLQVAR FT KWVERIVIGGDGDGGDDKEEREHKLGARIGIQRSRAATPTPERMELLSAIGMRWS" FT CDS complement(29605..30054) FT /transl_table=11 FT /gene="SCO0035" FT /gene_synonym="SCJ4.16c" FT /product="hypothetical protein" FT /note="SCJ4.16c, unknown, len: 149 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1V7" FT /protein_id="CAB52950.1" FT /translation="MLDRTSAALRQLKHAYKQVETIAALITSKNPKFSHIAANRPVQGL FT VVTREPFHTANAPFQKEMQPNTDTPVTVCSVAELEHLVALRDPSVSQLLGERLADPLAS FT TYSLDIAFRGRNLARNAILDAGWDSYPWKWHADLCRGAAADPRVA" FT CDS complement(30116..30355) FT /transl_table=11 FT /gene="SCO0036" FT /gene_synonym="SCJ4.17c" FT /product="hypothetical protein" FT /note="SCJ4.17c, unknown, len: 79 aa; weak similarity to FT TR:Q48505 (EMBL:M63292;) beta-lactamase (fragment) from FT Lactococcus lactis subsp. lactis (87 aa) fasta scores; opt: FT 91, z-score: 133.7, E(): 4.4, (31.8% identity in 66 aa FT overlap)." FT /db_xref="GOA:Q9S1V6" FT /db_xref="InterPro:IPR003953" FT /db_xref="UniProtKB/TrEMBL:Q9S1V6" FT /protein_id="CAB52951.1" FT /translation="MSAHGVTSRPPRCHGPSKPVVLGEGPNDRNKHGNHRTRLSTAVLV FT IGTGGAGPRAAIELAEAGTDVLDRFESEMPLASR" FT CDS complement(30379..31131) FT /transl_table=11 FT /gene="SCO0037" FT /gene_synonym="SCJ4.18c" FT /product="putative sigma factor" FT /note="SCJ4.18c, possible sigma factor, len: 250 aa; FT similar to many proposed sigma factors e.g. TR:CAB44418 FT (EMBL:AL078610) putative sigma factor from Streptomyces FT coelicolor (223 aa) fasta scores; opt: 419, z-score: 506.3, FT E(): 7.7e-21, (44.3% identity in 183 aa overlap) and FT SW:SIGY_BACSU RNA polymerase sigma factor, SigY from FT Bacillus subtilis (178 aa) fasta scores; opt: 111, z-score: FT 142.5, E(): 1.4, (23.9% identity in 117 aa overlap). Note FT possible framshift from previous CDS as similar to all but FT the N-terminus of TR:CAB42013 (EMBL:AL049754) putative RNA FT polymerase sigma factor from Streptomyces coelicolor (294 FT aa) fasta scores; opt: 270, z-score: 327.8, E(): 6.7e-11, FT (26.9% identity in 238 aa overlap) while SCJ4.19c is FT similar to the N-terminus. Contains possible FT helix-turn-helix motif (+3.23 SD) 91-112 aa" FT /db_xref="GOA:Q9S1V5" FT /db_xref="InterPro:IPR013249" FT /db_xref="UniProtKB/TrEMBL:Q9S1V5" FT /protein_id="CAB52952.1" FT /translation="MAEGRPRGHPRTGAFLATVTTRLAISTARSARVRREAYVGPWLPE FT PVDTSADPQLGAERAEAVEMAVLLLLERLNPVERAAYVLREAFDYSYRQVAAILETSEG FT NARQLVSLARKHLATERREQVSRGEHQRLLEVFLTAAQTGDLRTLEEALAADVVSYADG FT GGIRGASRIPVVGRSYVSKYLTAFAPRFWPGAQVRWVEANDRPAVLVHSDGKAVALLSI FT DASTQGIDRLMWVTNPGKLASYAASSSC" FT CDS complement(31146..31274) FT /transl_table=11 FT /gene="SCO0038" FT /gene_synonym="SCJ4.19c" FT /product="putative sigma factor" FT /note="SCJ4.19c, partial CDS, possible sigma factor, len: FT 24 aa; similar to the N-terminus of TR:CAB42013 FT (EMBL:AL049754) putative RNA polymerase sigma factor from FT Streptomyces coelicolor (294 aa) fasta scores; opt: 105, FT z-score: 185.5, E(): 0.0056, (50.0% identity in 32 aa FT overlap) and may frameshift into the downstream CDS FT (SCJ4.18c) which is similar to the remainder." FT /db_xref="UniProtKB/TrEMBL:Q9S1V4" FT /protein_id="CAB52953.1" FT /translation="MHAGQDLGSIEEATRQFVDARPKLFGIAYRVLGSTVEAEDVL" FT CDS 31520..32137 FT /transl_table=11 FT /gene="SCO0039" FT /gene_synonym="SCJ4.20" FT /product="hypothetical protein SCJ4.20" FT /note="SCJ4.20, unknown, len: 205 aa; similar to the FT N-terminal region of TR:O53411 (EMBL:AL021897) hypothetical FT protein from Mycobacterium tuberculosis (360 aa) fasta FT scores; opt: 165, z-score: 190.9, E(): 0.0028, (34.1% FT identity in 135 aa overlap)." FT /db_xref="GOA:Q9S1V3" FT /db_xref="InterPro:IPR002641" FT /db_xref="UniProtKB/TrEMBL:Q9S1V3" FT /protein_id="CAB52954.1" FT /translation="MLTRRRDPSPCTDSGEGGPRSGTVALAALPRPVAVVVGAGGVRGA FT VHAGVGHALEQRGFRPDMTTGTSVGALNGAIAAARPDRAAPWLEHVWTQLCRRDVYQPG FT FPATRAGISTDRGLRRQIERDLAEVSGRLPTVALPAGTDVWPAPWDFRHSKRLIEAASA FT TASRFLDELSVDEPVLCRAGHDAVASVTTWWSPRPPFAGAGL" FT CDS 32134..33357 FT /transl_table=11 FT /gene="SCO0040" FT /gene_synonym="SCJ4.21" FT /product="putative glycosyl transferase" FT /note="SCJ4.21, possible glycosyl transferase, len: 407 aa; FT similar to many e.g. TR:O86304 (EMBL:AJ223970) macrolide FT glycosyl transferase from Streptomyces ambofaciens (417 aa) FT fasta scores; opt: 615, z-score: 696.4, E(): 2e-31, (34.3% FT identity in 405 aa overlap). Contains Pfam match to entry FT PF00201 UDPGT, UDP-glucoronosyl and UDP-glucosyl FT transferases." FT /db_xref="GOA:Q9S1V2" FT /db_xref="HSSP:1IIR" FT /db_xref="InterPro:IPR002213" FT /db_xref="UniProtKB/TrEMBL:Q9S1V2" FT /protein_id="CAB52955.1" FT /translation="MSTLAFLNIGMHGHINPTLPVAAELVRRGHTVTYHTFPAFREEIA FT ATGANVRLYPGGDQPLPDPPAPITLMEALARTSLDLLPAVLADLRDDRPDLIVHDSACP FT WGALAARVLGLPAVSSFTTFAYNRHVPSPTRASRELLAGAAARPRNLAGYVGARLALRR FT RFAATGVPLVDLADIRQPLNLVYTSRAFQPAVEEFDRSYRFVGPSIGARPDDPSFPVNR FT LRDPVLYASLGTVFNADPLLLRTFATALSPLAGTVVVSTGQTDPAALGELPGNVLARRS FT VPQLEVLDRAALFITHGGMNSVNEALFAGVPLLLVPQGADQPMVARRVVELGAGLSIRT FT ENITEDSVRAVARRLLEDSRYRAATSGLRATQHEAGGYRRAADELEGYLRPTGAVPVHP FT APVDPQGG" FT misc_feature 33013..33216 FT /note="Pfam match to entry PF00201 UDPGT, UDP-glucoronosyl FT and UDP-glucosyl transferases, score 37.10, E-value FT 1.3e-09." FT CDS 33360..33845 FT /transl_table=11 FT /gene="SCO0041" FT /gene_synonym="SCJ4.22" FT /product="putative integral membrane protein" FT /note="SCJ4.22, possible integral membrane protein, len: FT 161 aa; contains possible membrane spanning hydrophobic FT regions." FT /db_xref="UniProtKB/TrEMBL:Q9S1V1" FT /protein_id="CAB52956.1" FT /translation="MTPAVAALLMLAGLSEALGRVTPVAVRRRGVPRSRIVRLVLAGAV FT VEGAVFALWPLTAWTLAELLPASPSPGDGLDWTPGLVTPLVLSAVLAFPLLGPLLHLLL FT FVGVGAGLTGPLSAATGLGWWTAAGCVAVAGVALGVTVEGVRRLVVRISVTDTAETS" FT CDS 33842..34777 FT /transl_table=11 FT /gene="SCO0042" FT /gene_synonym="SCJ4.23" FT /product="hypothetical protein" FT /note="SCJ4.23, unknown, len: 311 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1V0" FT /protein_id="CAB52957.1" FT /translation="MNDFLLWAVALGPALLAEGLLARYEVLAYGAGWRAPVTELPEGVP FT YARGADPDRPPGAYLVYLDGIGKRRVRDSRDGGQLVRAVLAGAPELRVLGQVQPYSPLA FT DPLADRPVWSWLRRRVGLVLFLHNVMQIFVAADRRYRPLYNRAVGSQIATQLRLAGYRP FT GSGVPVVLLSYSGGAQVATGAVDELRERLDCPLLLIMFGGFHNGANDLTRAEHVHRLTS FT SADRIERVGTWMFPQRWPLFRGSGWNRAVRAGNVTVHRFDPATHVGPRSYISRSTLLPD FT GRTHLARTANTVVELIRAHCRSQAAERPLP" FT CDS complement(35179..35907) FT /transl_table=11 FT /gene="SCO0043" FT /gene_synonym="SCJ4.24c" FT /product="conserved hypothetical protein" FT /note="SCJ4.24c, unknown, len: 242 aa; weakly similar to FT several hypothetical proteins eg. TR:O86850 (EMBL:AJ007731) FT from Streptomyces coelicolor (284 aa) fasta scores; opt: FT 167, z-score: 198.4, E(): 0.0011, (31.7% identity in 224 aa FT overlap)." FT /db_xref="GOA:Q9S1U9" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S1U9" FT /protein_id="CAB52958.1" FT /translation="MKIAVIGGTGLIGSQVVENLNAAGHEAVPHSLSTGVDVVSGQGVD FT RAVEGADVVVNLRNSPTFDDASLAFFEASMGNLLAAAGDGGVGHFVILSIVGVDKVPGL FT DYYRAKVLQEELLRGGAVPYSIVRATQFMEFMDVVLTWTADKDSVRLPATPIQPIAAKD FT VAAAVAEVAVGAPLNGIRNIGGPEVFALDDLGRLILSRKGDSRTVVTDPTAGMFAAVKG FT DVLTDTDARLAQTRYTDWLS" FT CDS complement(36006..36674) FT /transl_table=11 FT /gene="SCO0044" FT /gene_synonym="SCJ4.25c" FT /product="putative oxidoreductase" FT /note="SCJ4.25c, probable oxidoreductase, len: 222 aa; FT similar to many e.g. SW:NOX_THETH NADH dehydrogenase from FT Thermus thermophilus (205 aa) fasta scores; opt: 169, FT z-score: 215.5, E(): 0.00012, (27.7% identity in 220 aa FT overlap). Contains Pfam match to entry PF00881 FT Nitroreductase, Nitroreductase family" FT /db_xref="GOA:Q9S1U8" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q9S1U8" FT /protein_id="CAB52959.1" FT /translation="MDVYEAVKSRRSVRRFSGRPVPREVLKRVLSAAAWAPSGSNLQPW FT HAFVLSDGPLAALKKRAGARLAAGDPFDEPEYEQYPQHLKSPYRERRAAFGEQRYGALG FT IAREDTEARQRAASGNWECFGAPAALFCYIDRDLGHPQWSDVGMFLQNVMLLLREEGLH FT SCTQMAWAKFHSTVAETVAPPPDLMLFCGMSIGYEEPAANSARTGRAALGETVTFVDGP FT " FT misc_feature complement(36123..36671) FT /note="Pfam match to entry PF00881 Nitroreductase, FT Nitroreductase family, score 37.00, E-value 4.2e-07" FT CDS complement(36689..36817) FT /transl_table=11 FT /gene="SCO0045" FT /gene_synonym="SCJ4.26c" FT /product="hypothetical protein" FT /note="SCJ4.26c, unknown, len: 42 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1U7" FT /protein_id="CAB52960.1" FT /translation="MGFSRQRYGARKRPGAGQAQHLVIHEMVANDTVTIATMILSD" FT CDS 36816..37478 FT /transl_table=11 FT /gene="SCO0046" FT /gene_synonym="SCJ4.27" FT /product="putative hydrolase" FT /note="SCJ4.27, possible hydrolase, len: 220 aa; similar to FT SW:ACPD_ECOLI acyl carrier protein phosphodiesterase (200 FT aa) fasta scores; opt: 272, z-score: 336.5, E(): 2.2e-11, FT (33.2% identity in 193 aa overlap)" FT /db_xref="GOA:Q9S1U6" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/Swiss-Prot:Q9S1U6" FT /protein_id="CAB52961.1" FT /translation="MATLLHIDSSVFPAEASASRSVTAAFRRTWEEQHPEGTVIYRDLA FT AVPVPHITADAWSAGYADPSERSTRQSAAFAARLELIEELERADVILIGAPMYNYTVPS FT TLKAWLDSVLLLGRTAGEAPSAQGTPTVVVASRGGSYAPGTPREDFEFVQNYLEAVLRS FT TLGLDLEFIVPELTMAPRNPAMSELLPLFESSRERAHSEAVTKAKELTERLTADNGR" FT CDS complement(37614..38768) FT /transl_table=11 FT /gene="SCO0047" FT /gene_synonym="SCJ4.28c" FT /product="putative transcriptional regulator" FT /note="SCJ4.28c, possible transcriptional regulator, len: FT 384 aa; C-terminal similar to many transcriptional FT regulator eg. SW:SLYA_ECOLI transcriptional regulator from FT Escherichia coli (146 aa) fasta scores; opt: 156, z-score: FT 184.9, E(): 0.0061, (24.6% identity in 122 aa overlap). FT Contains Pfam match to entry PF01047 MarR, MarR family" FT /db_xref="GOA:Q9S1U5" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q9S1U5" FT /protein_id="CAB52962.1" FT /translation="MTDDPHAPVPTALNPVPLGGGPTNVDLHLKPEKFGNVFLSDRLDP FT SRTQVPAAAQRPATAASGNEPTQSVAWKTIPSWFLVATDDRTMGTDNLRFMAKRAKATT FT VEVDAPHAVKETNPDDVTKLILRAAGDSRPSLAKTGTSGRTAFLGGAAVLSIAAGRHRD FT PRPPHLTDRSATVAQSLHGSIPTDSAVLVPGGGGRAARSGHRWLFQVKRYRVTWRRYDA FT VMAVHASSRDAASRASDRPGDVSPFALGLLLRRAHWRAAGVMSEALRPLGIELRHFAVL FT IVLVDRGPTVQRDLAAETGTDKAGIMRVVDDLERRNLAVRKPVPGDRRARAVEITPAGL FT ELFDAAHVAAEPLAEGLVADLGPDDTERLTRLLTRLAHPGGSDA" FT misc_feature complement(37641..37952) FT /note="Pfam match to entry PF01047 MarR, MarR family, score FT 48.90, E-value 1.1e-10" FT CDS complement(39107..39490) FT /transl_table=11 FT /gene="SCO0048" FT /gene_synonym="SCJ4.29c" FT /product="hypothetical protein" FT /note="SCJ4.29c, unknown, len: 127 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1U4" FT /protein_id="CAB52963.1" FT /translation="MSSPAGAEDDPDRAGKDMRVTACTVGTYRLPCPFHLATTPIPSLA FT ILGRQEHPGGVSRAPVVVHRPSISGSSRVSAHRYGRDEILGTVCSDHDPVVFLEGVGID FT EAVPDDRRWVKWRGGPAHEFRAA" FT CDS 39489..39812 FT /transl_table=11 FT /gene="SCO0049" FT /gene_synonym="SCJ4.30" FT /product="hypothetical protein" FT /note="SCJ4.30, unknown, len: 107 aa" FT /db_xref="InterPro:IPR005561" FT /db_xref="UniProtKB/TrEMBL:Q9S1U3" FT /protein_id="CAB52964.1" FT /translation="MSAELERLRAENRQLHEAVTSHAVVDQAIGVLVALGRISPTDGFA FT VLRQVSQHTNIKLSALAECILQHGRGADLPGPVQTELLTALKERFVPTGLFDKSGDAAA FT WIR" FT CDS 39877..40212 FT /transl_table=11 FT /gene="SCO0050" FT /gene_synonym="SCJ4.31" FT /product="hypothetical protein" FT /note="SCJ4.31, hypothetical protein, len: 111 aa; region FT of similarity to many respiratory electron transport chain FT proteins eg. TR:O49078 (EMBL:AF037456) cytochrome B6-F FT complex iron-sulphur subunit from Fritillaria agrestis (230 FT aa) fasta scores; opt: 104, z-score: 143.7, E(): 1.2, FT (32.8% identity in 67 aa overlap)." FT /db_xref="GOA:Q9S1U2" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/TrEMBL:Q9S1U2" FT /protein_id="CAB52965.1" FT /translation="MRQGGAPRMATGGTARLLISNGGDATLELTVEPWADTYQIFPKQT FT WVVVTHSPAADGSWAGTLRGDEPFQVDHQPESVAVWVNGNCFHLSDVEGNAIDSADWHC FT PVQGSSF" FT CDS complement(join(40223..40402,40478..40918)) FT /pseudo FT /transl_table=11 FT /gene="SCO0051" FT /gene_synonym="SCJ4.32c" FT /gene_synonym="SCJ4.33c" FT /product="putative transposase" FT /note="SCJ4.32c, partial CDS, possible transposase, len: FT 59aa; similar to N-terminal region of many eg. TR:CAB38475 FT (EMBL:AL035636) putative transposase (229 aa) fasta scores; FT opt: 249, z-score: 392.1, E(): 1.8e-14, (59.6% identity in FT 57 aa overlap)." FT /note="SCJ4.33c, partial CDS, possible transposase, len: FT 146aa; similar to N-terminal region of many eg. TR:CAB38475 FT (EMBL:AL035636) putative transposase (229 aa) fasta scores; FT opt: 532, z-score: 652.6, E(): 5.5e-29, (55.6% identity in FT 144 aa overlap)." FT CDS join(41354..41764,41800..42174) FT /pseudo FT /transl_table=11 FT /gene="SCO0053" FT /gene_synonym="SCJ4.34" FT /gene_synonym="SCJ4.35" FT /product="putative transposase" FT /note="SCJ4.34, partial CDS, possible transposase, len: 146 FT aa; similar to SW:YI22_BURCE insertion element hypothetical FT protein from Pseudomonas cepacia (147 aa) fasta scores; FT opt: 439, z-score: 578.9, E(): 7e-25, (57.6% identity in FT 118 aa overlap)." FT /note="SCJ4.35, partial CDS, possible transposase, len: 124 FT aa; similar to SW:YI21_BURCE insertion element hypothetical FT protein from Pseudomonas cepacia (147 aa) fasta scores; FT opt: 527, z-score: 683.1, E(): 1.1e-30, (65.3% identity in FT 118 aa overlap)." FT CDS complement(42171..43682) FT /transl_table=11 FT /gene="SCO0055" FT /gene_synonym="SCJ4.36c" FT /product="putative membrane-associated oxidoreductase" FT /note="SCJ4.36c, possible membrane-associated FT oxidoreductase, len: 503aa; N-terminal region similar to FT TR:Q53931 (EMBL:X64420) HisD L-histidinol:NAD FT oxidoreductase from Streptomyces coelicolor (203 aa) fasta FT scores; opt: 345, z-score: 401.6, E(): 5.2e-15, (35.6% FT identity in 177 aa overlap). Also similar to TR:O88013 FT (EMBL:AL031107) hypothetical protein from Streptomyces FT coelicolor (527 aa) fasta scores; opt: 684, z-score: 783.6, FT E(): 0, (37.0% identity in 525 aa overlap)" FT /db_xref="UniProtKB/TrEMBL:Q9S1T7" FT /protein_id="CAB52970.1" FT /translation="MLSYDELTSPERELWDAFPEGRRVDLRTGVPDTDAPPAGDRWGPD FT RTVRAAVVATLLLGANDDRSGTVAALRLTGARITGRLNLSGTEICHTFSLQGCRLDEAV FT QLHGATTRTIEITNSWVPGINAELARIEGDLDLRRSTFEGGFLILVNARMAGNLLISDA FT RILDPEEWAVRAGGLVLNGGVFGQRLTTQGGLRLPGAQLLSGLFLQGARLGNTAGVALA FT AGGMAASTVDCSQGFAAQGGVLLRRARIEGLLTFEGAQLNGDGVALDCVSMHVGDFDYR FT TATPLSGLVDLRSAQATWCQDSEQSWPREVLLEGFTYGSIRFWDAPSAAGDDGPPTRDG FT VARRLAWLRRNPGYVPQPYEQLAGWYRQIGHDDDARRVLLAKQRHRRLTLSPSARAWGH FT LLDVTVGYGYRPWLAGVWLLALTLLGTLAFSTHSPSPVKRDEGSPFQPLVYTLDLLIPL FT GGLGQRTGWYWPNSSLQWLSYLLIAFGWMLTTAIIAGITRTLQKN" FT CDS 43768..43857 FT /transl_table=11 FT /gene="SCO0056" FT /gene_synonym="SCJ4.37" FT /product="hypothetical protein" FT /note="SCJ4.37, unknown, len: 29 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1T6" FT /protein_id="CAB52971.1" FT /translation="MCRELLAKARLHPIESETDDTVLPTELTA" FT CDS 43950..44090 FT /transl_table=11 FT /gene="SCO0057" FT /gene_synonym="SCJ4.38" FT /product="hypothetical protein" FT /note="SCJ4.38, unknown, len: 46 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1T5" FT /protein_id="CAB52972.1" FT /translation="MLWPLPWYLTGPAALAWACLRAREKAAHGQAPEGDADSQSEWGEV FT A" FT CDS 44253..44975 FT /transl_table=11 FT /gene="SCO0058" FT /gene_synonym="SCJ4.39" FT /product="hypothetical protein" FT /note="SCJ4.39, unknown, len: 240 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1T4" FT /protein_id="CAB52973.1" FT /translation="MLGKQVLPAAGVEEAVAVFRCACRTASHWSFPWAICPRTRVERPP FT RRRTPDRSRPRRRARAGHRSSSIDATARWGHASVARAQDILARRYRLECADAAFELLKT FT SSQQSNVKLHTLADAVVRTPAPDLDARSWRRRPPPAGRSQCGTWAPRPYSTRHPVRPSC FT RRAAGPPTASPLITVKGHVLGMVSSHHGHPLHGFSRLQLAALQQTGTDVGRWLSWHWDT FT VVLDALERLHVQAVGACR" FT CDS 45267..46073 FT /transl_table=11 FT /gene="SCO0059" FT /gene_synonym="SCJ4.40" FT /product="putative zinc-binding oxidoreductase" FT /note="SCJ4.40, possible zinc-binding oxidoreductase, len: FT 268 aa; similar to many both prokaryote and eukaryote egs. FT TR:O85702 (EMBL:AF072709) putative oxidoreductase from FT Streptomyces lividans 66 (313 aa) fasta scores; opt: 494, FT z-score: 509.6, E(): 5e-21, (41.3% identity in 240 aa FT overlap) and SW:QOR_CAVPO quinone oxidoreductase from Cavia FT porcellus (guinea pig) (329 aa) fasta scores; opt: 397, FT z-score: 411.5, E(): 1.5e-15, (32.8% identity in 244 aa FT overlap). Contains Pfam match to entry PF00107 adh_zinc, FT Zinc-binding dehydrogenases" FT /db_xref="GOA:Q9S1T3" FT /db_xref="HSSP:1PQW" FT /db_xref="InterPro:IPR013154" FT /db_xref="UniProtKB/TrEMBL:Q9S1T3" FT /protein_id="CAB52974.1" FT /translation="MKAVRFHEYGAPDVLRYEDVEQPLPGAGEVRVRVAATSFNSVDGN FT IRGGFMRGPIPVVLPHTPGIDVAGTVDALGEGVDGVAVGDDAIGFLTMDGDGAAAEYVL FT APAEALAPAPRSVPLADVAAVPVVGLTAYQTLFNRGRLTAGQRVLINGAGGTVGGYAVQ FT LAKDAGAHVIATSSPRSREAVASAGDDEIIDHTTTDVTAAVTEPVDIALSLAPVAPAEL FT AALVTLVRPGGVVVNTTVWMPAPATRSAAYGASTCSSAATSTSWWR" FT misc_feature 45285..46058 FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score -75.50, E-value 1e-05" FT CDS 46064..46201 FT /transl_table=11 FT /gene="SCO0060" FT /gene_synonym="SCJ4.41" FT /product="hypothetical protein" FT /note="SCJ4.41, unknown, len: 45 aa; predicted by GC FT Frameplot and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1T2" FT /protein_id="CAB52975.1" FT /translation="MALIVGGELRVAVTERAALTELPALHSRAAEGAVHGKVVVVPSAA FT " FT CDS complement(46430..47734) FT /transl_table=11 FT /gene="SCO0061" FT /gene_synonym="SCJ4.42c" FT /product="conserved hypothetical protein" FT /note="SCJ4.42c, unknown, len: 434 aa; similar to FT SW:YDEG_SCHPO hypothetical protein from Schizosaccharomyces FT pombe (fission yeast) (509 aa) fasta scores; opt: 665, FT z-score: 791.0, E(): 0, (37.6% identity in 423 aa overlap) FT and to TR:Q9KEQ9 (EMBL:AP001509) Bacillus halodurans BH0790 FT protein, 454 aa; fasta scores: opt: 1262 Z-score: 1468.0 FT bits: 280.8 E(): 3.9e-74; 45.433% identity in 416 aa FT overlap" FT /db_xref="GOA:Q9S1T1" FT /db_xref="InterPro:IPR008313" FT /db_xref="UniProtKB/TrEMBL:Q9S1T1" FT /protein_id="CAB52976.1" FT /translation="MSFPTSITDHPIVQEAVHRLDDLGDPRAGQTLTRCLNDTLARTIR FT PMPDGTAFVVTGDIPAMWLRDSSTQMMPYLALLKDDTALQHLLLAVLRRQFQQIAHDPY FT ANAFNAEPSGRAHDPEDLCGDPWVWEQKYEVDSLAFPLLLAHRFWAATGRTDHVPGMLR FT TARTVISVWRTEQDHERLSTYRFRRENGPSSDTLPNAGRGTPVTRTGMTWSGFRPSDDA FT CAFGYNVPANLCAAAALDGAAELAHHTHDTELAEDAARLAAELRAATARHGTVRHPDFG FT SIYAYEVDGNGNAVLMDDANMPGLLSLPLVANIPTTDPVYLATRGFVLSPRNPTWYRGT FT AAEGIGSPHTPDEHIWPIAIAVQGLTSNDTTERRWALTTLLATDAGTGQMHESFHKDDP FT HRFTRPWFSWANAMYAELALDTVGLGTRPLWQAGT" FT CDS complement(47789..48892) FT /transl_table=11 FT /gene="SCO0062" FT /gene_synonym="SCJ4.43c" FT /product="putative LacI family transcriptional regulator" FT /note="SCJ4.43c, probable LacI family transcriptional FT regulator, len: 367 aa; similar to many transcriptional FT regulators e.g. SW:GALR_ECOLI galactose operon repressor FT (343 aa) fasta scores; opt: 549, z-score: 636.2, E(): FT 4.5e-28, (32.5% identity in 332 aa overlap). Contains Pfam FT matches to entry PF00532 Peripla_BP_like, Periplasmic FT binding proteins and LacI family and entry PF00356 lacI, FT Bacterial regulatory proteins, lacI family. Contains FT possible helix-turn-helix motif (+3.86 SD) 26-47." FT /db_xref="GOA:Q9S1T0" FT /db_xref="HSSP:1LCC" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q9S1T0" FT /protein_id="CAB52977.1" FT /translation="MRTGGPVQEGRGRDRSMTARRGSGPTMHDVGKLAQVSAMTVSRVL FT KDDPGVSEATRERVFAAVDRLGYRRNQTARSLRLGGSGMIGLVVTNLANPFYSRLALGV FT QEVATEYGLRVVLSNSGEQADREPGLIDGLVDHQVEGLIVVPAGSRQQHLARAMRHVPV FT VLAARPPAGLDTDCVLVEDFHGAREATGCLLADGHTRIAFLGNPPALYTGAERLRGFWA FT AHEEVGVEPDNALICQGLVDSATAERATLDLLGRAERPTALFCTNNRISQGAIRALYKS FT GTTLPVAGFDDFDLSDVLGLPLTLVSYDADEIGRQAARLLIDRLEQDDEAAPRASRRVT FT VPTRVVRHGAPSADGPGQRPPAPDTSV" FT misc_feature complement(47942..48652) FT /note="Pfam match to entry PF00532 Peripla_BP_like, FT Periplasmic binding proteins and LacI family., score 89.10, FT E-value 9.2e-23" FT misc_feature complement(48743..48826) FT /note="Pfam match to entry PF00356 lacI, Bacterial FT regulatory proteins, lacI family, score 30.90, E-value FT 3.3e-07" FT CDS complement(48889..49824) FT /transl_table=11 FT /gene="SCO0063" FT /gene_synonym="SCJ4.44c" FT /product="putative glucokinase" FT /note="SCJ4.44c, possible glucokinase, len: 311 aa; similar FT to many eg. SW:GLK_STRCO glucokinase from Streptomyces FT coelicolor (317 aa) fasta scores; opt: 175, z-score: 195.7, FT E(): 0.0015, (28.2% identity in 326 aa overlap). Contains FT Pfam match to entry PF00480 ROK, ROK family" FT /db_xref="GOA:Q9S1S9" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:Q9S1S9" FT /protein_id="CAB52978.1" FT /translation="MITATTRHASRPVPVLDIGGTHVTAALVDPTASRPVPSPVIRRPL FT RAHADADAVLDAIARAALALPAGHSPRWGVAMPGPFDYATGVGRFADVGKFESLNGVDV FT GAGLRERLADRCERLRFLNDADAFAVGEYGSGAAAGHDHVVCLTLGTGVGSSFLSGGRP FT VHSGPLVPPGGHAYRLTVHGRPLEDTVSRRGIRAHYARLTSATGDQHLPDVRDIAARAR FT KGDAAAQEAFRYAFDALGQALAPWIDRFEATAVVIGGSMARSWDLIHPALTTGRAPADG FT PDVPVLPARQPEEAPLLGAAHWAQGTPDAP" FT misc_feature complement(49336..49467) FT /note="Pfam match to entry PF00480 ROK, ROK family, score FT 30.40, E-value 5.8e-08" FT CDS complement(49821..51539) FT /transl_table=11 FT /gene="SCO0064" FT /gene_synonym="SCJ4.45c" FT /product="hypothetical protein" FT /note="SCJ4.45c, unknown, len: 572 aa" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q9S1S8" FT /protein_id="CAB52979.1" FT /translation="MPASRSYDPLPSYQPVDGRVTVGWPALAADLPPGPLVLAVDGPAA FT LDWTALADGLAGAVRAAGRDVEPIDVRGHYAAAADERITALPVPADDPFFTPLSQARVA FT DLFDSPPRPERPVRDGVALVYGPGASLCGPDLLWYADLPKRYAEAAVSKGELPVGVNLG FT RPAVPGDLVRLFYTDWPVLDRHRDAIAGRIDRWIDVQNADVPTALDGAALRSTLAHLAR FT GPVRTRPYFNSTPWGGQWAASELGFTPQSGNTALGYELIAPEAGVMIGDKDAAQVEVPF FT QLLCVAHPEDMLGVDVHRAFGTSFPIRFDYLDTMGGGNLSLHLHPRERYMREVFGWPYT FT QHETYYVTASEDGARVLLGLTGQADLDVMRRQVEDSIDNGTPMPVEQHIQSHPATVGQL FT FMIPAGTPHASGAGNLVLEVSATPYLYSLRLYDWLRKDAAGASRPLPYEHGFANLDTAR FT RGEDVTKDLIQQPRPLRSGEGWREEVLGALPDMFYAVHRLVVAQGCDILDDTAGRFHIL FT NVAAGEGAVIETRDGRSHTLAFAETITIPAAVGPYRVRALGGDEVRIVKALVVEP" FT CDS 51831..53144 FT /transl_table=11 FT /gene="SCO0065" FT /gene_synonym="SCJ4.46" FT /product="putative extracellular binding protein" FT /note="SCJ4.46, possible extracellular binding protein, FT part of a possible binding protein dependent transport FT system, len: 437 aa; similar to many egs. TR:Q9Z492 FT (EMBL:AF043654) BxlE, extracellular binding protein from FT Streptomyces lividans (434 aa) fasta scores; opt: 256, FT z-score: 290.5, E(): 8.1e-09, (23.3% identity in 446 aa FT overlap) and SW:YC14_PYRHO hypothetical ABC transporter FT extracellular binding protein from Pyrococcus horikoshii FT OT3 (441 aa) fasta scores; opt: 348, z-score: 393.3, E(): FT 1.5e-14, (25.4% identity in 343 aa overlap). Contains FT Prosite match to PS00013 Prokaryotic membrane lipoprotein FT lipid attachment site so may be anchored by lipid." FT /db_xref="GOA:Q9S1S7" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q9S1S7" FT /protein_id="CAB52980.1" FT /translation="MSASGRTSSAAVPLARRRFLTGVAAGAAALAAGGCARGASTSAQP FT GTTSISNDNATWDDGYRAAGRELEKITGYTLRPLSNPSVTSYQQVVQMTLQTSKSSDLV FT KWASGYQLKRLARAGGLTDLTPVWKGYAAKGWVRGTSRESVSYRGKVFGIPLYESYYVL FT FYSKPVFGKLGLSAPSSWDELLHCAEVLKRNRITPFLASQVGSWPAIEWFQELVSKVDP FT GFYQRLVAGEASYTDDRARRAMDIWHDFMRKGWMTSPDFDQARGPGALKEGTVGMFLHG FT TWQASGMSAAGMKPGTDYGAFILPTVRPATPKSVIAESGVFVVPSRASSHEAAMANVGA FT WLDPSVQRVWSDFLQDSSANPKVRAGNPVVAGLQRDVARNRRTALVRYWEAGPPSLIQG FT NTNDLGGFMAGQTSPATTLRRMQERALDEWAAWKRDEA" FT misc_feature 51903..51935 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS 53141..54100 FT /transl_table=11 FT /gene="SCO0066" FT /gene_synonym="SCJ4.47" FT /product="putative integral membrane permease" FT /note="SCJ4.47, possible integral membrane permease, part FT of a possible binding protein dependent transport system, FT len: 319 aa; similar to many eg. SW:LACF_AGRRD lactose FT transport system permease from Agrobacterium radiobacter FT (298 aa) fasta scores; opt: 460, z-score: 522.1, E(): FT 1e-21, (30.5% identity in 272 aa overlap). Contains Pfam FT match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component and Prosite match to PS00402 FT Binding-protein-dependent transport systems inner membrane FT comp sign." FT /db_xref="GOA:Q9S1S6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q9S1S6" FT /protein_id="CAB52981.1" FT /translation="MSTSVTDRRPPTPAGGPGPTRRPTRRPPLTQKWATARERVTAGGF FT MAPAVLLVALFLLAPFVWTIYRSFFSDTRTSPFSWFDNYSLFASDPALSRSIQNTLMWV FT VGTVALPFVLGLAIACMTNAGRFSRLARLCVVLPYALSGSAVAVVWNFMLTTDGAVNQV FT LTALGLDSLAQGWLLTWPGNTVVMILANAWQATGVAVILFLVGLQSIPPETLEAGALDG FT ASGWQQFRHIVLPQLRPVSIIVIGMSLVNGLKSFDLIWVLTQGGPGRATETLAVSMYNE FT TFLELRPGAGAAIAVVLTVIVLAASWLYLRRQLDVKGV" FT misc_feature 53756..53989 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 64.50, E-value 2.3e-15" FT misc_feature 53759..53845 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS 54097..54918 FT /transl_table=11 FT /gene="SCO0067" FT /gene_synonym="SCJ4.48" FT /product="putative integral membrane permease" FT /note="SCJ4.48, probable integral membrane permease, len: FT 273 aa; similar to many e.g. TR:Q9Z3R7 (EMBL:AF045609) FT putative inner membrane permease from the alpha-glucosides FT binding protein dependent transport system of Rhizobium FT (Sinorhizobium) meliloti (305 aa) fasta scores; opt: 393, FT z-score: 457.6, E(): 4e-18, (32.3% identity in 229 aa FT overlap). Contains Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component. Contains possible membrane spanning hydrophobic FT regions." FT /db_xref="GOA:Q9S1S5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q9S1S5" FT /protein_id="CAB52982.1" FT /translation="MTMSLGRVLRNTVIAVLALLWLVPTWLLVVNALVPAGSYSGSPHW FT LPRDFGLFGNMSQAWDKANLGPALGNSLLYSVVSAAAAAVIAGFAAFATIIMPVKRQAL FT WFWVIYSGTLLPLQVFIRPLFLSYAHTSLYDTQTGLVLIYTAIAVPFAFFVMRNYALTL FT PREVVEAARMDGASWWRVFWQIHVPLTRSAMIAVFVFQFVAVWNDLMFGITMVTSRNIR FT PVMAALADLQGNYSNVGPPIVLAGALLVSLPTVVLFFSAQRFFVSSLKIHR" FT misc_feature 54571..54807 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 61.00, E-value 2.5e-14" FT CDS 54968..56173 FT /transl_table=11 FT /gene="SCO0068" FT /gene_synonym="SCJ4.49" FT /product="putative hydrolase (putative secreted protein)" FT /note="SCJ4.49, possible hydrolase (putative secreted FT protein), len: 401aa; N-terminal region similar to that of FT TR:Q9Z4P9 (EMBL:AB024331) alpha-1,6-D-mannanase from FT Bacillus circulans (589 aa) fasta scores; opt: 218, FT z-score: 251.2, E(): 1.2e-06, (26.2% identity in 229 aa FT overlap)" FT /db_xref="GOA:Q9S1S4" FT /db_xref="InterPro:IPR014512" FT /db_xref="UniProtKB/TrEMBL:Q9S1S4" FT /protein_id="CAB52983.1" FT /translation="MLRSLLIRATAPAVCAGLLWTAAPAHAQSPAPTRPVSSDTWADRA FT TGTYRALQKHLYEGPGDHGLYLEHTPRQATDQEHSYLWPFREAAQAAVDMQRLPRTGPA FT YRQDAAERFDTAELYHTGGERPGYRSYLPAPLGTGGDVYYDDNAVVALSQLDQYEETGD FT ARYLRRAEQVVPVVSRAWDGDAAKACPGGMDWYDAPGNTIRATNVTALSAQLAARLYEH FT TRNRAYLDKAEQWYGWVYACMRKAPGLYVNDRGDDGSTNETLWTYNSGAMIGTATALYR FT GTGDARYLEKAVADARGSLAYWTGGTRLHDQPAVFNAFYFKDLLDLDAVRPDSAYLSAM FT SAYADNTYRSNRDASSGLFRFQPSNGGDYDPAAPAATLNQSAMVQIFATLADATRRDHR FT TS" FT CDS 56225..59383 FT /transl_table=11 FT /gene="SCO0069" FT /gene_synonym="SCJ4.50" FT /product="hypothetical protein" FT /note="SCJ4.50, unknown, len: 1052 aa" FT /db_xref="GOA:Q9S1S3" FT /db_xref="InterPro:IPR011682" FT /db_xref="UniProtKB/TrEMBL:Q9S1S3" FT /protein_id="CAB52984.1" FT /translation="MPKPPLTRPSWWDSDIARDLLKERVATTAGLGGRQVRLSGEPLLR FT HDGTGGLLQSIRVGVLHPGGAHPRPRITRARVSTAGGTPVRCETVPGPGDDARLLVPEV FT DAPTPLLIELPELEEGTQVAFEARPQRHWTLHLVQHSHLDIGYTDPQGRVMAESRAYLD FT SLLELCRDTDDWPEPARFRWAVEGFHSFQDWRANRPRRQVESFLDRVREGRVELTAMPF FT NLHTETCSTDELHELLRPMTELRDRHGIDITTAMQTDVPGQVVGLPDVLADNGIRYLSV FT AHNWAGRAVPHLVGGEHLPRLFRWQAPSGKSVLVWRTDTPHGLAYMEGSILGFDESYDH FT VDDLLPAYLGALASFPYPHQGRGIPGFPALDLPGTADPYPWDVLHLRVLGKFADNGPPR FT RVISDTVRRWNEQWAYPRLRASRNQDFFEDAEKRVGDRLETYRGDWTDWWVDGVGAGAV FT PLAATRRGQAALAEAQTVAGYAHLMGVPGSTAVTSAAPEVYRSASLFNEHTWGAGDPWT FT HGDHGHGSGEKQWHWKYSQAMRAHDDAETLLDAASALLGEAFAPSGDAAASFYVVNTCS FT WLRTETARLFLPESTVALSDAVRVLDGRTGEPLPFAEEAQSNDRHRAAGRFLHVPVADV FT PACGAVRLDVVTGADSPAPADGANPPADATVLENDHLRVTVDLREACIASVVDKSTGRE FT MVRQDATVGFNGYVYDEYATAGAFNHQSSKTVADDSMHLLASRSTAPPAALVDRTTDAT FT GQTLVYECAPAGTRRLRVRVHLPHHAARVDIENRIDKDATLTKESAFFAFPFALDGPVV FT HTESTGGVLGTDRETVPGSAAHMRAVRRWISLSDGTRLVALATADAPLVQLSGIAIPYV FT PYPQSLPQEEPATVFSWVHNNIWDTNFPAQQAFDHVFRYSVGFATTAENDTVGADGLAV FT RVAAVTGHPLVPVRARADAGAASPAQARFLALDNPRVRLVGVTVPDSGKLLVRLQSLAD FT VPVTCRLTTPFPVVRAALTTYLGLPLRDISPEPDGAIPVDVPVLATAAVVLDLSSVPTG FT GSAG" FT CDS 59558..60241 FT /transl_table=11 FT /gene="SCO0070" FT /gene_synonym="SCJ4.51" FT /product="hypothetical protein" FT /note="SCJ4.51, unknown, possibly involved in sugar FT metabolism, len: 22 aa; similar over region to many FT hypothetical sugar metabolism proteins e.g. SW:VIPB_SALTI FT polysaccharide biosynthesis protein from Salmonella FT enterica (348 aa) fasta scores; opt: 220, z-score: 251.9, FT E(): 1.1e-06, (31.8% identity in 170 aa overlap). Note FT overlap with downstream gene." FT /db_xref="GOA:Q9S1S2" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S1S2" FT /protein_id="CAB52985.1" FT /translation="MSGTQTVLSAAASSRRLKRLVFVSSASVYGYGNPDDWAGPEDEHR FT SVRELLSSVYGRMPPQFGEERRLRPLSVYANTKAFGEVQTDLILRPAGISYSVVRYFSV FT YGQPQVIKPGSHSWVVAWFADRAAAGLPLHLNGGGHQVRDFVRVDDIAEGTLRALTEPA FT ADRKTVNITGAGPRSRWRRPAPGPARSGRRRTAGRGCPAAGFRQPASAARARSGRAPWP FT TRPVP" FT CDS complement(60069..60275) FT /transl_table=11 FT /gene="SCO0071" FT /gene_synonym="SCJ4.52c" FT /product="hypothetical protein" FT /note="SCJ4.52c, unknown, len: 68 aa; predicted by GC FT Frameplot and amino acid usage. Note overlap with FT downstream gene." FT /db_xref="UniProtKB/TrEMBL:Q9S1S1" FT /protein_id="CAB52986.1" FT /translation="MQISLEAGSRRIKEQDAWAKELFPTVHERLKQAAETLPPDSPAQP FT FVDALTELVQAQADATGFVVLHR" FT CDS complement(60740..64093) FT /transl_table=11 FT /gene="SCO0072" FT /gene_synonym="SCJ4.53c" FT /gene_synonym="SCJ11.01c" FT /product="putative secreted protein" FT /note="SCJ4.53c, partial CDS, unknown, len: >356 aa; FT similar to many of undefined function e.g. SW:WAPA_BACSU FT wall associated protein from Bacillus subtilis (2334 aa) FT fasta scores; opt: 322, z-score: 315.0, E(): 3.5e-10, FT (27.5% identity in 320 aa overlap)." FT /note="SCJ11.01c, partial CDS, possible secreted protein, FT len: >793 aa" FT /db_xref="InterPro:IPR006530" FT /db_xref="UniProtKB/TrEMBL:Q8CK70" FT /protein_id="CAD55416.1" FT /translation="MHSRAARTPMWRARRTHRTALVSAITTAAVVIAAAPGLAATPKPK FT LPEPESPWTKPTKVEAPATPAGSIKAPESEAEAKPSTEVAAWRTAQKARATGEEPAKSP FT TSRSVAAAATDDYLPEDQGEVPWHQILDTRLDDALVARVNVSNGNLMLAATDFDIAGVG FT QKLQLPRTYNSLEAPWGKVSQRWWQAYERYLQINNGEVDVFDATGNLLRFTAASDGTYT FT TPAGYSKDLKKNADGSYTLTDRKSGAKDTYNEHGTLTKVTDKNKGTITVDQHDDGSEHK FT GFRLTETRSGRWIDLVKTYPSQWQAKDHTGRTAVLNLDGSGNLAKVTDTAGKATTYEYD FT SSRRVTKVTTPEGTVTLFTYDSHNRVTSMQRTTGTSGSGHTGPTWRYDYTAATPSDAGT FT TTVTDPHGDETIYTHNADGEVTKVTDPLGHSRHSTYKNHLTQTAIDAMGTGTDGTGGNT FT TTYGWDARNNAVSQKLPLGATASVSAYQTVAGTDLPNDFTTADGRKDSYKYDANGNTMS FT VTTTGTAGATREYTYNEATPECGGFEGQRCTAKDGNGKVTSFTYDDEGNLIKVKPPAPL FT GETTYTYDALGRVETVEDGRGITTVYGYDSRDRVREVSSTNFTVTYTYDGDGNVTTRSD FT ASGFTKWKYDELNRESVRTLQNGAQTALAYTPGGDVDFYTDPTGTTDYTWDKAGRLDYL FT VAPDGAKTDFDYNNNDKRTKTVYPGGTTQAVTIDDNGRPERIKTTSGTQTFVDLTYSYA FT SVGKDTTKIRTRTDHLTNLKTSYTYDSQDRLSYALEADSAGARKASWLYCWDKAGNLTS FT QNGSKSACPGGTTYTYNDASELTGKNGSTTGWSYDKLGNETDAASGTARTDESWTDYSQ FT LAGITTGGTNYDLVHAGTTNAERTKLASTWFHHTALGLASTTTNGVDTGFIREPSGTLN FT SMTTGGKSYYYLTDATGNVLGLVDDTGKRTHTYAYGPTGTPRGTTTEAAPQPYRYAGAY FT ADPTGLYKMGHRYYDPTLGRFTQPDPSGQETNPYLYAAGDPVNRTDPTGLFSFSDILDT FT GSKIFGGVSGCVSGIGAAASTGTIQYAAAVGGVVGAGVGSAVGAGAAVVGSCALGGVAG FT YYGADVITYG" FT CDS 64605..64925 FT /transl_table=11 FT /gene="SCO0073" FT /gene_synonym="SCJ11.02" FT /product="hypothetical protein" FT /note="SCJ11.02, unknown, len: 106 aa" FT /db_xref="UniProtKB/TrEMBL:Q9RIA2" FT /protein_id="CAB52887.1" FT /translation="MSTPGRRTPCSHPTRHHRVPAQRLTRSVQQAGRLLSWNLAAGMTT FT AATDLLLAPQADWWHMLWPLPWYITSASIPLWTTLRAREKAAHQQSPGEDDDIHDKWDQ FT AA" FT CDS 64994..65092 FT /transl_table=11 FT /gene="SCO0074" FT /gene_synonym="SCJ11.03" FT /product="hypothetical protein" FT /note="SCJ11.03, unknown, len: 32 aa" FT /db_xref="UniProtKB/TrEMBL:Q9RIA1" FT /protein_id="CAB52888.1" FT /translation="MGGTAAPLHPLRLVQDGFRGGDADVLAWFWSG" FT CDS 65092..65679 FT /transl_table=11 FT /gene="SCO0075" FT /gene_synonym="SCJ11.04" FT /product="hypothetical protein" FT /note="SCJ11.04, unknown, len: 195 aa; weakly similar to FT SW:KILB_STRLI KilB protein from Streptomyces lividans FT plasmid pIJ101 thought to be involved in plasmid transfer FT (147 aa) fasta scores; opt: 126, z-score: 152.9, E(): 0.37, FT (27.5% identity in 142 aa overlap). Contains probable FT coiled-coil region approx. 25-45aa. Contains TTA encode FT leucine, possible site for bldA regulation." FT /db_xref="UniProtKB/TrEMBL:Q9RIA0" FT /protein_id="CAB52889.1" FT /translation="MEASGILFPIVRRGCAMASMLGLLEAREASARERVEVLREEAARA FT VAALEAGEIELDRRVIAREELVEALAVSAAETTGVTEAEGEGETALVPAPASAAEPGAI FT VPHWQEGLSVSVLSPNNQRILNVLQDRPGLEPVRAKDIAAALGIEAAAAKVEGVRPKGK FT RLAERGWLLQEASGAFSAGRRLVASPGGDPSA" FT misc_feature 65158..65160 FT /note="Leucine encoding tta codon, possible target for bldA FT regulation." FT CDS complement(join(65627..65941,65883..66173,66104..66535)) FT /pseudo FT /transl_table=11 FT /gene="SCO0076" FT /gene_synonym="SCJ11.05c" FT /gene_synonym="SCJ11.06c" FT /gene_synonym="SCJ11.07c" FT /product="putative transposase" FT /note="SCJ11.05c, partial CDS, possible transposase, len: FT 104 aa; appears to form the C-terminal region of a FT transposase with the remainder encoded by the two upstream FT CDSs, SCJ11.06c and SCJ11.07c. Similar to many egs. FT TR:P73414 (EMBL:D90906) proposed transposase from FT Synechocystis sp. strain PCC6803 (261 aa) fasta scores; FT opt: 246, z-score: 334.1, E(): 3e-11, (44.7% identity in 85 FT aa overlap) and TR:CAB38475 (EMBL:AL035636) proposed FT transposase from Streptomyces coelicolor (229 aa) fasta FT scores; opt: 234, z-score: 319.2, E(): 2e-10, (51.5% FT identity in 66 aa overlap)." FT /note="SCJ11.06c, partial CDS, possible transposase, len: FT 104 aa; appears to form the middle region of a transposase FT with the remainder encoded by the downstream and upstream FT CDSs, SCJ11.05c and SCJ11.07c. Similar to many egs. FT TR:O67989 (EMBL:AF003948) proposed transposase from FT Rhodococcus opacus (242 aa) fasta scores; opt: 286, FT z-score: 379.4, E(): 9e-14, (49.4% identity in 89 aa FT overlap) and TR:CAB38475 (EMBL:AL035636) proposed FT transposase from Streptomyces coelicolor (229 aa) fasta FT scores; opt: 227, z-score: 303.9, E(): 1.4e-09, (41.6% FT identity in 89 aa overlap)." FT /note="SCJ11.07c, partial CDS, possible transposase, len: FT 143 aa; appears to form the N-terminal region of a FT transposase with the remainder encoded by the two FT downstream CDSs, SCJ11.06c and SCJ11.05c. Similar to many FT eg. TR:Q44579 (EMBL:M98777) transposase from IS elements of FT Acetobacter xylinum (278 aa) fasta scores; opt: 258, FT z-score: 326.7, E(): 7.8e-11, (38.5% identity in 109 aa FT overlap). Also similar to TR:Q54404 (EMBL:Z11519) from FT Tn4811, in Streptomyces lividans 66 (320 aa) fasta scores; FT opt: 362, z-score: 453.5, E(): 6.7e-18, (50.5% identity in FT 103 aa overlap)." FT repeat_region 66404..66680 FT /note="Degenerate direct repeat unit; repeated at FT 6294-6566bp." FT CDS complement(66688..67911) FT /transl_table=11 FT /gene="SCO0079" FT /gene_synonym="SCJ11.08c" FT /product="putative integral membrane transport protein" FT /note="SCJ11.08c, possible integral membrane transport FT protein, len: 407 aa; similar to many e.g. TR:P72472 FT (EMBL:U63848) sensor protein homolog from Streptomyces FT lividans (410 aa) fasta scores; opt: 2533, z-score: 2742.9, FT E(): 0, (98.5% identity in 407 aa overlap) and TR:Q56147 FT (EMBL:U09991) chloramphenicol resistance protein from FT Streptomyces venezuelae (436 aa) fasta scores; opt: 559, FT z-score: 610.6, E(): 1.2e-26, (28.2% identity in 411 aa FT overlap). Contains Pfam match to entry PF00083 sugar_tr, FT Sugar (and other) transporter." FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q9RI96" FT /protein_id="CAB52893.1" FT /translation="MPTATTTSIDSPSLPARSPLVSWLAVISVMLGIFSIITTEILPIG FT LLTSIGSSFTISDGMAGLMMTMPGFLAAVSAPVVTVATGRIDRRLMLGTFILLLALANF FT LAAVAPSYWLVLVSRVLVGVTIGGFWSIGAGLASRLVPAESVGRATAVIFSAVPLGSVL FT GVPLGTLIGDVAGWRTAFLVMGILTLCVFAMLLLVVPPLPTDEPTRLSALTGMLRSVNT FT RFALVMTFLVVLAHFGAYTYVTPFLEQVTHVSAGLITVYLLVYGVAGIAGNFLGGSAVA FT RYPIGTFAAAALMIAGATVLLPVLGKEDLGAVALLVLWGVAYGAVPVCSQTWFAKASPD FT SPEASSVLFTASFQATISIGALVGGVVVDHSSPSMVMTLAGTAAALVVLVAWSHGARKN FT PLPDPAKP" FT misc_feature complement(66694..67842) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -103.00, E-value 0.0034." FT repeat_region 68006..68278 FT /note="Degenerate direct repeat unit; repeated at FT 4692-4968bp." FT repeat_region 68283..68306 FT /note="Part of inverted repeat bounding possible disrupted FT insertion element." FT misc_feature 68283..69767 FT /note="Possible disrupted transposon. Bounded by an FT inverted repeat (Score 51: 21/24 ( 87%) matches, 0 gaps). FT Contains 2 partial CDSs (SCJ11.10c and SCJ11.11c) which are FT similar to many transposases and linked by a possible FT ribosomal frameshifting site but the upstream CDS lacks a FT start codon so is probably not translated. Also contains a FT hypothetical CDS (SCJ11.09)." FT CDS 68372..68887 FT /transl_table=11 FT /gene="SCO0080" FT /gene_synonym="SCJ11.09" FT /product="hypothetical protein" FT /note="SCJ11.09, unknown, len: 171 aa" FT /db_xref="InterPro:IPR015068" FT /db_xref="UniProtKB/TrEMBL:Q9RI95" FT /protein_id="CAB52894.1" FT /translation="MGIHCEYVRLSLAKLQRSLSDPSWAQDHIDELGDAWAEEDSLPPE FT KAPYFSIEKSWHKLHHLIAAHGGMPVDVIHGGAELPLEDDMDYGPARYLTPEDVARASG FT CLATTPFDELARHYDLAAMRSAEIYLLPESETGVPSDLDTLRHRYEELARFFSTVATAG FT DGVVLVLA" FT repeat_region 68914..69647 FT /note="Inverted and repeated degenerately at FT 20998-21806bp." FT CDS complement(join(68914..69411,69363..69647)) FT /pseudo FT /transl_table=11 FT /gene="SCO0081" FT /gene_synonym="SCJ11.10c" FT /gene_synonym="SCJ11.11c" FT /product="putative insertion element transposase" FT /note="SCJ11.10c, partial CDS, possible transposon FT transposase, len: 165aa; similar to many egs. TR:O69847 FT (EMBL:AL023702) putative insertion element IS1647 FT transposase from Streptomyces coelicolor (150 aa) fasta FT scores; opt: 868, z-score: 1024.9, E(): 0, (81.8% identity FT in 148 aa overlap) and SW:YI21_BURCE insertion element FT IS402 hypothetical protein from Pseudomonas cepacia (211 FT aa) fasta scores; opt: 472, z-score: 561.6, E(): 6.4e-24, FT (46.7% identity in 167 aa overlap)." FT /note="SCJ11.11c, partial CDS, possible transposon FT transposase, len: 94aa; similar to many egs. TR:O69846 FT (EMBL:AL023702) putative insertion element IS1647 FT transposase from Streptomyces coelicolor (119 aa) fasta FT scores; opt: 460, z-score: 639.1, E(): 3.1e-28, (77.3% FT identity in 88 aa overlap) and SW:YI22_BURCE insertion FT element IS402 hypothetical protein from Pseudomonas cepacia FT (147 aa) fasta scores; opt: 202, z-score: 287.7, E(): FT 1.1e-08, (39.8% identity in 88 aa overlap)" FT misc_feature complement(69370..69376) FT /note="possible ribosomal frameshifting site" FT repeat_region 69744..69767 FT /note="Part of inverted repeat bounding possible disrupted FT insertion element." FT CDS 69799..70647 FT /transl_table=11 FT /gene="SCO0083" FT /gene_synonym="SCJ11.12" FT /product="putative transposase" FT /note="SCJ11.12, possible transposase, len: 282aa; FT N-terminal similar to SW:YI22_BURCE (147 aa) fasta scores; FT opt: 431, z-score: 529.9, E(): 3.7e-22, (54.6% identity in FT 119 aa overlap), C-terminal similar to SW:YI21_BURCE (211 FT aa) fasta scores; opt: 700, z-score: 852.1, E(): 0, (61.4% FT identity in 166 aa overlap). SW:YI22_BURCE and FT SW:YI21_BURCE encode insertion element IS402 hypothetical FT protein from Pseudomonas cepacia. C-terminal also similar FT to TR:O69847 (EMBL:AL023702) putative insertion element FT IS1647 transposase from Streptomyces coelicolor (150 aa) FT fasta scores; opt: 440, z-score: 540.6, E(): 9.4e-23, FT (44.2% identity in 147 aa overlap)." FT /db_xref="GOA:Q9RI92" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:Q9RI92" FT /protein_id="CAB52897.1" FT /translation="MPCPARELSVRFGVGTSPWIVSDELWDRVEPLLPQRERRFRHPGR FT KPLPDRDVLCGILYVLHTGIPWEYLPRGLGFGSGMPCWRRLRDWNEAGVRQRLHEILLA FT ELNAAARLDRSRCVVDSPRQGAKGGQHTGPSPVDRGRAGSKHHLITDGHGTPLAVLLTG FT GNRNDVTQLLPLLDAIPPVRGPVGRPRRKPDSLFADRGYDHDIYRDQARTRGIVPAIAR FT RGTLHGAALGTYRWVVERSLAWLHGFRRLRIRWERRADIHEALLRLACCLITHRQLRAL FT R" FT repeat_region 69799..70647 FT /note="Inverted and repeated degenerately at FT 31881-32405bp." FT CDS 70777..71235 FT /transl_table=11 FT /gene="SCO0084" FT /gene_synonym="SCJ11.13" FT /product="conserved hypothetical protein" FT /note="SCJ11.13, hypothetical protein, len: 152 aa; similar FT to TR:Q9S1Q3 (EMBL:AL109972) Streptomyces coelicolor FT hypothetical protein SCJ9A.17, 175 aa; fasta scores: opt: FT 683 Z-score: 803.5 E(): 4e-37; 68.421% identity in 152 aa FT overlap" FT /db_xref="UniProtKB/TrEMBL:Q9RI91" FT /protein_id="CAB52898.1" FT /translation="MTGEFEHRHGLTPGTNQVRPADHDDQAAARTLAQVTPTPADLATF FT YESIGDVTWEDVGNGYFLNPAGDLLLRLQEYGVVDFGTDEKSRGLVIGSNGGGLIYVAG FT PDGAVYRTRTASLDEAELDKVADGLRQFLELLERSLTRFNADGDPGYL" FT CDS complement(71648..72139) FT /transl_table=11 FT /gene="SCO0085" FT /gene_synonym="SCJ11.14c" FT /product="hypothetical protein" FT /note="SCJ11.14c, unknown, len: 163 aa; weak similarity to FT a region from many proposed DNA ligases eg. TR:CAB45581 FT (EMBL:AL079355) putative DNA ligase from Streptomyces FT coelicolor (355 aa) fasta scores; opt: 182, z-score: 228.5, FT E(): 2.3e-05, (32.6% identity in 132 aa overlap)." FT /db_xref="UniProtKB/TrEMBL:Q9RI90" FT /protein_id="CAB52899.1" FT /translation="MNGELVVWESGRLAFERLQQRLARRRGAGALAAARACPAHLVVFG FT LMRQGSTDLPPWPCSRRRTALEELFAETRMTAPLTLCPSTADPDTARQWLTWTSTGQEG FT LVFKPLRAPYRAGARARGKYKICITEDRRRRSRHRPRHRGGGAGQSGVRLVYRSRSAVS FT " FT CDS complement(72159..73097) FT /transl_table=11 FT /gene="SCO0086" FT /gene_synonym="SCJ11.15c" FT /product="putative ribosylglycohydrolase (putative secreted FT protein)" FT /note="SCJ11.15c, possible ribosylglycohydrolase (putative FT secreted protein), len: 312 aa; similar to SW:DRAG_RHORU FT (EMBL:X16187) ADP-ribosylglycohydrolase DraG from FT Rhodospirillum rubrum (294 aa) fasta scores; opt: 267, FT z-score: 299.5, E(): 2.5e-09, (31.1% identity in 283 aa FT overlap)" FT /db_xref="GOA:Q9RI89" FT /db_xref="InterPro:IPR005502" FT /db_xref="UniProtKB/TrEMBL:Q9RI89" FT /protein_id="CAB52900.1" FT /translation="MKWIQRAAGAVVGSAVGDALGAPFEFGPQGAFSARFPAPGSGGEM FT CGGGGWDPGEATDDTQMAVLVAESLLERGGLDLPDIFARFQRWAASEPKDIGLQTEDVL FT TNGMPWDLAAAIHFQVNQRAAGNGSLMRASTSAVHFAAAGQEATMEAARRIAALTHGDR FT AAWEGTAIFHELIRVAFEDIDPLAALPDVLALVHPDHRGRYATVLAPDWHPEQATEFNG FT AVWPCLGSAVWALRTTTGFEHAVRAAIDLGGDTDTVAAVTGGLAGAYYGLDAIPARWTQ FT PLHVPLPGFDGRVLHLTDLLHLAHRLAEEPR" FT CDS complement(73784..74833) FT /transl_table=11 FT /gene="SCO0087" FT /gene_synonym="SCJ11.16c" FT /product="putative secreted protein" FT /note="SCJ11.16c, putative secreted protein, len: 349 aa; FT similar to TR:P97061 (EMBL:Z81324) hypothetical protein FT downstream of a beta-lactam regulatory protein in FT Streptomyces clavuligerus (338 aa) fasta scores; opt: 548, FT z-score: 613.6, E(): 8.1e-27, (40.6% identity in 330 aa FT overlap)" FT /db_xref="GOA:Q9RI88" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q9RI88" FT /protein_id="CAB52901.1" FT /translation="MSDDTDAPRPKRRIQDLGRRTVLRGAAFGAAAPLLASPAHAIASD FT TATTRRASLAGSPSFRWLGTSGWRIDVKERTVLFDPYITRFKTGLFDGNFKPGTKLRSD FT PELVRERIGRPEIVLVSHSHWDHIADVPYIAKTTGARIVGTETTFHLLVAFGVDPGQIS FT VVKGGEVLDFDGITVEVVSSLHSRNKRHTYFAPGTLNAPPPTAPRIISDLPEGDTLAYQ FT VTTGSAGPSAFLMGASDFSERAVQGLSPDLAMIAVPSSASTSRYVPRLLRALGQPGVVV FT PVHWDNFEEPLSETPRRDPAMDLDAFVALVHQETPMSRIVVPDYHTTYGADMRPKPRPV FT PKNGDHRLP" FT CDS complement(74917..75876) FT /transl_table=11 FT /gene="SCO0088" FT /gene_synonym="SCJ11.17c" FT /product="putative secreted beta-lactamase" FT /note="SCJ11.17c, possible secreted beta-lactamase, len: FT 319 aa; some similarity to many e.g. SW:BLAB_STRCI FT partially defined beta-lactamase regulatory protein from FT Streptomyces cacaoi (312 aa) fasta scores; opt: 196, FT z-score: 231.8, E(): 1.5e-05, (28.4% identity in 278 aa FT overlap) and SW:BLAC_BACLI beta-lactamase from Bacillus FT licheniformis (307 aa) fasta scores; opt: 123, z-score: FT 148.2, E(): 0.68, (24.3% identity in 267 aa overlap). FT Contains possible N-terminal signal sequence." FT /db_xref="InterPro:IPR001466" FT /db_xref="UniProtKB/TrEMBL:Q9RI87" FT /protein_id="CAB52902.1" FT /translation="MVEDRIHEAFAGAGAEGLLHAVPIGGKPGCDEVTVGRCSAGDTAA FT VGERAAVDEVAVGADEPVVIASIFKVLLVLEFARQVAAGQLDPRARVRVTAGDRLGGWG FT TAGCADDVELSLRDLALFAISVSDNSAADLLLAQVGLDTVRLLVEELRLERTRIVGGPR FT DVLQSMLSEVGARDESEFALRYPALPEARKRRMSVLDPSRTNASTPREITRLLRLIWCD FT EAGPPQACAWVRELMSRQVFRHRLVSGFPDEVTVAAKTGTLPGLHMEAGVVRYPDGSRY FT AVSVFARTRELASSRTAVDAAIGTAARIAVDFLHRRGS" FT CDS 75856..76893 FT /transl_table=11 FT /gene="SCO0089" FT /gene_synonym="SCJ11.18" FT /product="putative transcriptional regulator" FT /note="SCJ11.18, probable LysR-family transcriptional FT regulator, len: 345 aa; similar to many e.g. SW:ALSR_BACSU FT ALS operon regulator from Bacillus subtilis (302 aa) fasta FT scores; opt: 507, z-score: 564.5, E(): 4.4e-24, (31.0% FT identity in 290 aa overlap). Note possible alternative FT start codons downstream. Contains Pfam match to entry FT PF00126 HTH_1, Bacterial regulatory helix-turn-helix FT protein, lysR family and Prosite match to PS00044 Bacterial FT regulatory proteins, lysR family signature." FT /db_xref="GOA:Q9RI86" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q9RI86" FT /protein_id="CAB52903.1" FT /translation="MYPVLDHRFAPHVSSLAVDLLRHLRIFVAVAEELHFSRAADQLGM FT AQPPLSQAVRRLETELGAELFDRSRRQVKLTPAGAVLLDEARSLLTGEKRLRTLARRAG FT DGELGTLRAGIPPGTMVATLSLLLGACAEHYPGMSVDLQEITTGEQLRLIASGGLDVGL FT VHQPVDITELRIGPEASVELGVVLPRISPLAQLPEVPLAHLAGQDLVLLPREQAPGWYD FT RILDTCRAGGFVPTGLRHASRPELLLALVSAGHGIAFGQGAVAGKEPRVVWRPLSGRPL FT IQRTSAVWSAVRSSHPAAPHFAELAADVLARDRTATLHGDDGAPAETGSPRPWAVVYDE FT ATWRW" FT misc_feature 75916..76344 FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 165.40, E-value 9.3e-46" FT misc_feature 75958..76050 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT CDS complement(<76895..>77314) FT /transl_table=11 FT /gene="SCO0090" FT /gene_synonym="SCJ11.19c" FT /product="putative transposase" FT /note="SCJ11.19c, partial CDS, possible transposase, len: FT 140 aa; similar to SW:IS12_STRAL IS112 28,4 kD protein from FT Streptomyces albus (256 aa) fasta scores; opt: 349, FT z-score: 447.9, E(): 1.4e-17, (53.9% identity in 128 aa FT overlap)." FT /db_xref="UniProtKB/TrEMBL:Q9RI85" FT /protein_id="CAB52904.1" FT /translation="EGLLNSVEMSQSTPNLEALTHFKNPARVSPTSRDNTPSDYAIAEH FT SKNYRYFTNHQVLVDADTRLVVVTGRPMPGNRNDCKAWEEAGANAAVGRTLTIADDWKK FT AHNKSHPFRAKCSQGDRLDRSKSPGKHPRSSTESRT" FT repeat_region 77202..77244 FT /note="Part of inverted repeat bounding insertion element FT IS1652." FT misc_feature 77202..78271 FT /note="Insertion element IS1652." FT CDS 77315..78271 FT /transl_table=11 FT /gene="SCO0091" FT /gene_synonym="SCJ11.20" FT /product="putative insertion element IS1652 transposase" FT /note="SCJ11.20, probable insertion element IS1652 FT transposase, len: 318 aa; similar to many e.g. TR:O86758 FT (EMBL:AL031035) transposase from Streptomyces coelicolor FT (318 aa) fasta scores; opt: 2217, z-score: 2566.4, E(): 0, FT (99.7% identity in 318 aa overlap)." FT /db_xref="GOA:O86758" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:O86758" FT /protein_id="CAB52905.1" FT /translation="MVHRNAPLTETGRLRLARCVVEDGWPVRRAAERFQVSHTTASRWA FT RRYRQLGVTGMSDRSSRPHHQPRRTAAAVEEHVLRLRREHRIGPLRLAVRCGIAASTAH FT RILVRHGLPPLAALDRATGEPVRRYERARPGELVHIDVKKLGRIPDGGGHKTLGRAEGH FT RSRTNGAGWAYLHTALDDHSRIAYTEDLPDETAPTCAAFLVRATAYFASLGIRIERVLT FT DNAWAYSKNTWRNTCRDLDISPRWTRPWRPQTNGKVERFHRTLLDEWAYQKPYTSDHER FT REAFTHWLHWYNYHRPHTGIGGHTPASRGTNLSEQHS" FT repeat_region 78229..78271 FT /note="Part of inverted repeat bounding insertion element FT IS1652." FT CDS complement(join(78489..78614,78613..78732,78708..78815)) FT /pseudo FT /transl_table=11 FT /gene="SCO0092" FT /gene_synonym="SCJ11.21c" FT /gene_synonym="SCJ11.22c" FT /gene_synonym="SCJ11.23c" FT /product="putative transposase" FT /note="SCJ11.21c, partial CDS, possible transposase, FT associated with the two upstream CDSs, len: 42aa; similar FT to a region of SW:IS12_STRAL insertion element IS112 28.4kD FT protein from Streptomyces albus (256 aa) fasta scores; opt: FT 239, z-score: 404.1, E(): 3.8e-15, (88.1% identity in 42 aa FT overlap)." FT /note="SCJ11.22c, partial CDS, possible transposase, FT associated with upstream and downstream CDSs, len: 42aa; FT similar to a region of SW:IS12_STRAL insertion element FT IS112 28.4kD protein from Streptomyces albus (256 aa) fasta FT scores; opt: 191, z-score: 306.6, E(): 1e-09, (77.5% FT identity in 40 aa overlap)." FT /note="SCJ11.23c, partial CDS, possible transposase, FT associated with the two downstream CDSs, lacks start codon, FT len: 35aa; similar to a region of SW:IS12_STRAL insertion FT element IS112 28.4kD protein from Streptomyces albus (256 FT aa) fasta scores; opt: 163, z-score: 274.2, E(): 6.5e-08, FT (69.4% identity in 36 aa overlap)." FT misc_feature complement(78709..78714) FT /note="Possible site for ribosomal frameshifting." FT repeat_region 78830..78875 FT /note="Inverted repeat bounding noncomposite transposon." FT misc_feature 78830..80793 FT /note="Noncomposite transposon (awaiting designation)." FT CDS complement(78983..79702) FT /transl_table=11 FT /gene="SCO0095" FT /gene_synonym="SCJ11.24c" FT /product="hypothetical protein SCJ11.24c" FT /note="SCJ11.24c, hypothetical protein, part of FT noncomposite transposon, len: 239 aa; weakly similar to FT SW:YAFD_ECOLI hypothetical protein from Escherichia coli FT (259 aa) fasta scores; opt: 112, z-score: 130.4, E(): 6.7, FT (25.0% identity in 208 aa overlap)." FT /db_xref="UniProtKB/TrEMBL:Q9RI81" FT /protein_id="CAB52909.1" FT /translation="MSIEVVEPPALPPQGTAVEFKVRVPPSGEITLVTGRQRVGIHQAL FT AGRTLTVWANHRSVHFLLDGHPVTTVPSRLRPEDLAYLTMRYGARPAGPEPAPAALPRA FT RSGTAILAAGEPVEVDRKVHRDGLVRLASGRYQVGFALASRTITLRLDGHLMHAIADDA FT LTGTWPCPVPADRLGQIEGPRTATSPLPPPPLPAGAFRAQRKVHASGRFMINGQSIELG FT PRHAGKLVTVVIEDTHY" FT CDS complement(79839..80690) FT /transl_table=11 FT /gene="SCO0096" FT /gene_synonym="SCJ11.25c" FT /product="putative noncomposite transposon transposase" FT /note="SCJ11.25c, possible noncomposite transposon FT transposase, len: 283 aa; similar to many e.g. TR:O86758 FT (EMBL:AL031035) proposed transposase from Streptomyces FT coelicolor (318 aa) fasta scores; opt: 275, z-score: 330.3, FT E(): 4.9e-11, (32.7% identity in 278 aa overlap)." FT /db_xref="GOA:Q9RI80" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:Q9RI80" FT /protein_id="CAB52910.1" FT /translation="MLRSEVVDVQQLAEYRYRTVREVLGGSPIGEVAARYGTSRQTLHT FT WRRRFVLEGMPGLLDRSRRPRNSPAGLSAEMEAEICELRRRHLRWGARRIAHELSVRGL FT ESAPSRATVHRVLSRNGLVRAQEQQHPRKYRRWQREAPMHLWQMDLVGGVPLADGRECK FT MVTGIDDHSRFVVIASVVAVPSARAVCSAFAAAMRRYGVPFEVLTDNGKQFTGRHQRPQ FT PVEVLFERICRENGITQRLTKPRSPTTTGKIERSHRTLREEFLDHVVPFESLAAAQQAI FT DG" FT repeat_region 80748..80793 FT /note="Inverted repeat bounding noncomposite transposon." FT CDS complement(80845..81165) FT /transl_table=11 FT /gene="SCO0097" FT /gene_synonym="SCJ11.26c" FT /product="putative integral membrane protein" FT /note="SCJ11.26c, possible integral membrane protein, len: FT 106 aa; contains possible membrane spanning hydrophobic FT regions." FT /db_xref="UniProtKB/TrEMBL:Q9RI79" FT /protein_id="CAB52911.1" FT /translation="MPARADRIITALSWWWASAPLLLFIPAIAYAVGLPDVRREVGWAF FT GLLALLTAAFAPTAGLVAAQIGDRREARGRFLIMAAVSSVPILFFLLFGVLFPECPDGH FT HC" FT repeat_region 81565..81576 FT /note="Parted of the inverted repeat which bounds insertion FT element IS1653." FT misc_feature complement(81565..82665) FT /note="Insertion element IS1653. Previously sequenced as FT EMBL:AB024596 Streptomyces coelicolor insertion sequence FT DNA." FT CDS complement(81602..82441) FT /transl_table=11 FT /gene="SCO0098" FT /gene_synonym="SCJ11.27c" FT /product="putative transposase" FT /note="SCJ11.27c, possible transposase, len: 279 aa; FT previously sequenced therefore identical to TR:Q9Z9H3 FT (EMBL:AB024596) putative transposase from Streptomyces FT coelicolor (279 aa) fasta scores; opt: 1839, z-score: FT 2190.6, E(): 0, (99.6% identity in 279 aa overlap). Also FT similar to many others eg. TR:Q48339 (EMBL:M80805) from FT IS1031 of Acetobacter xylinum (278 aa) fasta scores; opt: FT 611, z-score: 732.8, E(): 0, (38.9% identity in 262 aa FT overlap)." FT /db_xref="GOA:Q9Z9H3" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:Q9Z9H3" FT /protein_id="CAB52912.1" FT /translation="MSERKPYPSDLSDARWALIEPTLTAWRNARLERRPTGKPAQVDLR FT DVFNAILYLNRTGIPWKYLPHDFPGHGTVYFYYAAWRDEGIFTQLNYDLTALARVKEGR FT KPEPTASVIDTQSVKTSTNVPLTSQGTDAAKKIVGRKRGILTDTIGLILAVTVTGAGLS FT ENAVGIRLLDQAKRTYPTIVKSWVDTGFKNAVIEHGATLGIDVEVVNRNPEKRGFHVVK FT RRWVVERSIGWIMMHRRLARDYETLTTSSEAMIHIASIDNLAKRITDETTPTWRGTY" FT repeat_region complement(82656..82665) FT /note="Part of the inverted repeat which bounds the FT insertion element IS1653." FT repeat_region complement(82710..83518) FT /note="Inverted and repeated degenerately at 7202-7935bp." FT CDS join(82710..83060,83039..83518) FT /pseudo FT /transl_table=11 FT /gene="SCO0099" FT /gene_synonym="SCJ11.28" FT /gene_synonym="SCJ11.29" FT /product="putative transposase" FT /note="SCJ11.28, partial CDS, possible transposase, len: FT 116aa; similar to many egs. TR:O69846 (EMBL:AL023702) FT putative insertion element IS1647 transposase from FT Streptomyces coelicolor (119 aa) fasta scores; opt: 623, FT z-score: 791.1, E(): 0, (77.4% identity in 115 aa overlap) FT and SW:YI22_BURCE insertion element IS402 hypothetical FT protein (147 aa) fasta scores; opt: 272, z-score: 352.9, FT E(): 2.7e-12, (39.7% identity in 116 aa overlap)." FT /note="SCJ11.29, partial CDS, possible transposase, len: FT 153aa; similar to many egs. TR:O69847 (EMBL:AL023702) FT putative insertion element IS1647 transposase (150 aa) FT fasta scores; opt: 810, z-score: 999.4, E(): 0, (76.9% FT identity in 147 aa overlap) and SW:YI21_BURCE insertion FT element IS402 hypothetical protein from Pseudomonas cepacia FT (211 aa) fasta scores; opt: 434, z-score: 539.8, E(): FT 1e-22, (45.1% identity in 153 aa overlap). Contains tta FT leucine codon, possible target for bldA regulation." FT misc_feature 83047..83053 FT /note="Possible site for ribosomal frameshifting." FT misc_feature 83189..83191 FT /note="tta leucine codon, possible target for bldA FT regulation." FT CDS complement(83516..84259) FT /transl_table=11 FT /gene="SCO0101" FT /gene_synonym="SCJ11.30c" FT /product="conserved hypothetical protein" FT /note="SCJ11.30c, unknown, len: 247 aa; similar to FT SW:YBFG_HAEIN hypothetical protein from Haemophilus FT influenzae (228 aa) fasta scores; opt: 374, z-score: 437.3, FT E(): 5.3e-17, (32.8% identity in 195 aa overlap). Contains FT TTA leucine codon, possible target for bldA regulation." FT /db_xref="UniProtKB/TrEMBL:Q9RI76" FT /protein_id="CAB52915.1" FT /translation="MRGCDDAGMRELNQLIDVEEPAWPELRETLGGGSVPVEVLPADTD FT VARTSLLQLQVTARSYLGAVVLHCGGLVVDNGWVRVFGSPLEGAVPSLAQVNQFPGAFD FT SAWQPDAGLVVAHDVLGGVFALNGGAPARAGRPGAPGEIVYFAPDSLRWEALGAGHSAW FT LAWLVSGALAELYTDLRWTGWQDEVRALNSDQGLSLFPPLWSAEARQDISATSRRAVPM FT AELLGVARDSCREFDGADPGLLGAV" FT misc_feature complement(83735..83737) FT /note="tta leucine codon, possible target for bldA FT regulation." FT CDS 84893..85339 FT /transl_table=11 FT /gene="SCO0102" FT /gene_synonym="SCJ11.31" FT /product="hypothetical protein" FT /note="SCJ11.31, unknown, len: 148 aa" FT /db_xref="UniProtKB/TrEMBL:Q9RI75" FT /protein_id="CAB52916.1" FT /translation="MSDNVAPLVPRSADVERRRYVSSLHSAPQRTGVSHVGSISHGCDV FT DPVGPDVKPAGKRSAVLRFVLAATPAPTGTSPTRTRVRTSSGRLRLAPGSARRARRDSH FT APRLLVGVRERAADDGGEGVRALPEASGLRVCALSAIEQGWSGR" FT CDS 85336..86643 FT /transl_table=11 FT /gene="SCO0103" FT /gene_synonym="SCJ11.32" FT /product="putative flavohemoprotein" FT /note="SCJ11.32, probable flavohemoprotein, len: 435aa; FT C-terminal region similar to many with reductase and FT dioxygenase activities, typical of flavohemoproteins e.g. FT TR:Q9ZI75 (EMBL:AF039533) naphthalene dioxygenase reductase FT from Pseudomonas stutzeri (328 aa) fasta scores; opt: 369, FT z-score: 419.0, E(): 5.6e-16, (28.6% identity in 241 aa FT overlap). Also typical of flavohemoprotein, C-terminal FT region contains Pfam match to entry PF00175 oxidored_fad, FT Oxidoreductase FAD/NAD-binding domain and N-terminal region FT contains Pfam match to entry PF00042 globin, Globin." FT /db_xref="GOA:Q9RI74" FT /db_xref="InterPro:IPR001221" FT /db_xref="UniProtKB/TrEMBL:Q9RI74" FT /protein_id="CAB52917.1" FT /translation="MTGRFEFMHQSSHPDRPTTPADDWSGANAAHLAAPARIAAAPASV FT TDEDVALVRASLTVVTPHVSELAAHFYSILFSRYPQVRDLFPAELDVQRERLVRALLRI FT VELVDDPDNLVAFCSRLGRGHRKFGTQSGHYPAVGECLLQALSHFAGPAWHPALATAWQ FT RAYTAAADVMVRAAEEDARSRPAVWDAHIVGHVHRGHGIAEITVRPHQPYPFVAGQYVS FT IETPWAPRQWRQYSPANAPRPNSELTFHVRAVREGKVSNALVHHARPGDPVRLGPPEGD FT MVLRPTRQRDLLFVAGGTGLAPIRALIEEVAQGSISDAREVSLFIGARTANELYGLDDM FT LRMSQRYHWLRVRAAVSDERIPGLEGTLPEVLAEFGPWYRHEAYLCGPPQMLSGAVHAL FT RRHGVPPRHIHYDPWDTPVLTAPLGPPPPDEEDDQL" FT misc_feature 85462..85869 FT /note="Pfam match to entry PF00042 globin, Globin, score FT 42.10, E-value 1.3e-08" FT misc_feature 86200..86529 FT /note="Pfam match to entry PF00175 oxidored_fad, FT Oxidoreductase FAD/NAD-binding domain, score 59.40, E-value FT 7.7e-14" FT CDS 86640..87311 FT /transl_table=11 FT /gene="SCO0104" FT /gene_synonym="SCJ11.33" FT /product="putative hydrolase" FT /note="SCJ11.33, possible hydrolase, len: 223aa; similar to FT TR:O54126 (EMBL:AL021529) putative NTP pyrophosphohydrolase FT from Streptomyces coelicolor (359 aa) fasta scores; opt: FT 223, z-score: 267.6, E(): 1.5e-07, (29.4% identity in 194 FT aa overlap)." FT /db_xref="GOA:Q9RI73" FT /db_xref="InterPro:IPR011576" FT /db_xref="UniProtKB/TrEMBL:Q9RI73" FT /protein_id="CAB52918.1" FT /translation="MNGPETPGSSGEHLLQQQLGTTDRAAVFYDRQVHPYLTPAMREFI FT ARQNMVFLSTADSRGACDASFRAGPPGFCVSLDDRSLTYPEYRGNGVLASAGNMTENPQ FT LGMLFMDFTHDHIGLHVNGTVRLYTDHEIRAWYPLLPTETAPGRQPHLWVHLTVEEAYV FT HCSKHIPHLEPAPRPRSATQRSRPKDSAYFPEPLPVHQASEPAGAEAGRPSWRDRLRIR FT P" FT CDS complement(87907..88632) FT /transl_table=11 FT /gene="SCO0105" FT /gene_synonym="SCJ11.34c" FT /gene_synonym="xlnC" FT /product="endo-1,4-beta-xylanase (putative secreted FT protein)" FT /note="SCJ11.34c, xlnC, endo-1,4-beta-xylanase (putative FT secreted protein), len: 241 aa; highly similar to many FT endo-1,4-beta-xylanases e.g. SW:XYNC_STRLI from FT Streptomyces lividans (240 aa) fasta scores; opt: 1605, FT z-score: 1785.1, E(): 0, (97.9% identity in 241 aa overlap) FT and SW:XYNA_BACSU from Bacillus subtilis (213 aa) fasta FT scores; opt: 813, z-score: 910.7, E(): 0, (58.8% identity FT in 221 aa overlap). Contains Pfam match to entry PF00457 FT Glyco_hydro_11, Glycosyl hydrolases family 11 and Prosite FT matches to PS00777 Glycosyl hydrolases family 11 active FT site signature 2 and PS00776 Glycosyl hydrolases family 11 FT active site signature 1" FT /db_xref="GOA:Q9RI72" FT /db_xref="HSSP:1HIX" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/Swiss-Prot:Q9RI72" FT /protein_id="CAB52919.1" FT /translation="MQQDGTQQDRIKQSPAPLNGMSRRGFLGGAGTLALATASGLLLPG FT TAHAATTITTNQTGTDGMYYSFWTDGGGSVSMTLNGGGSYSTQWTNCGNFVAGKGWSTG FT GRRTVRYNGYFNPSGNGYGCLYGWTSNPLVEYYIVDNWGSYRPTGTYKGTVSSDGGTYD FT IYQTTRYNAPSVEGTKTFQQYWSVRQSKVTSGSGTITTGNHFDAWARAGMNMGQFRYYM FT IMATEGYQSSGSSNITVSG" FT misc_feature complement(87916..88458) FT /note="Pfam match to entry PF00457 Glyco_hydro_11, Glycosyl FT hydrolases family 11, score 418.50, E-value 6.2e-122" FT misc_feature complement(87928..87963) FT /note="PS00777 Glycosyl hydrolases family 11 active site FT signature 2." FT misc_feature complement(88207..88239) FT /note="PS00776 Glycosyl hydrolases family 11 active site FT signature 1." FT repeat_region 89033..89161 FT /note="Part of inverted repeat bounding possible FT noncomposite drug resistance transposon." FT misc_feature 89033..90239 FT /note="Possible noncomposite drug resistance transposon." FT CDS 89073..89465 FT /transl_table=11 FT /gene="SCO0106" FT /gene_synonym="SCJ11.35" FT /product="putative insertion element transposase" FT /note="SCJ11.35, possible noncomposite drug resistance FT transposon transposase, len: 185 aa; similar to many e.g. FT TR:O69927 (EMBL:AL023861) putative IS1648 transposase from FT Streptomyces coelicolor (141 aa) fasta scores; opt: 432, FT z-score: 565.7 E(): 3.8e-24, (47.8% identity in 136 aa FT overlap)." FT /db_xref="UniProtKB/TrEMBL:Q9RI71" FT /protein_id="CAB52920.1" FT /translation="MSLTDAQWARIEPLLPDRTPRRAGQWRDHRQVIDAIVFKYRTGTP FT WMELPERFGSWKGAHNRLRMWAVDGTWEKVFTALLAQADAEGDLDWVIPVDSAVVRAHQ FT HAAGARQKGLRPASRTTMPSDGPAAD" FT CDS complement(89486..90043) FT /transl_table=11 FT /gene="SCO0107" FT /gene_synonym="SCJ11.36c" FT /product="putative aminoglycoside nucleotidyltransferase" FT /note="SCJ11.36c, possible noncomposite drug resistance FT transposon aminoglycoside nucleotidyltransferase, len: 185 FT aa; some similarity to many involved in antibiotic FT resistance e.g. TR:Q53702 (EMBL:J03947) lincosaminide FT nucleotidyltransferase from Staphylococcus aureus (161 aa) FT fasta scores; opt: 176, z-score: 229.0, E(): 2.1e-05, FT (28.4% identity in 148 aa overlap)" FT /db_xref="GOA:Q9RI70" FT /db_xref="InterPro:IPR000669" FT /db_xref="UniProtKB/TrEMBL:Q9RI70" FT /protein_id="CAB52921.1" FT /translation="MRCRSDLYLRTVSHYAMSAEDALALLERLHAHGVDACVGGGWSVD FT ALLGKQTRDHSDLDLWVPAVHLDPLFVAFGEAGVDRIFPWPGDRPWNFVLHDGVGLRVD FT LHLYEALADGSLHYGSVVDGAAFPAEALAGHGFIAGTAVRCESAEWAVRSHTGYPARDV FT DRHDVPLLCRKFEIPLPESFEP" FT repeat_region 90111..90239 FT /note="Part of inverted repeat bounding possible FT noncomposite drug resistance transposon." FT CDS 90242..90391 FT /transl_table=11 FT /gene="SCO0108" FT /gene_synonym="SCJ11.37" FT /product="hypothetical protein" FT /note="SCJ11.37, unknown, len: 49 aa" FT /db_xref="UniProtKB/TrEMBL:Q9RI69" FT /protein_id="CAB52922.1" FT /translation="MLRKTIKVQWLGDEEFGMVGRPRAITHDPESCEKTVSLKALRDPC FT GLAG" FT CDS complement(90395..90865) FT /transl_table=11 FT /gene="SCO0109" FT /gene_synonym="SCJ11.38c" FT /product="hypothetical protein" FT /note="SCJ11.38c, unknown, len: 156aa; shows similarity to FT human proteins involved in the expression of GAGE genes eg. FT TR:AAC33676 (EMBL:AF055473) GAGE-7 from Homo sapiens FT (Human) (116 aa) fasta scores; opt: 114, z-score: 144.7, FT E(): 1.1, (31.9% identity in 119 aa overlap)." FT /db_xref="UniProtKB/TrEMBL:Q9RI68" FT /protein_id="CAB52923.1" FT /translation="MVRDRLRQRPDPQREVNADVSAADHHTPWQYCRAVPSPPARQTFS FT QATAQPGEQAAIDHGGTVRRGQGYSLRASTIQVIHRQMLARCQPLDGGHGTPTVPAQRK FT ARREYENASARSSRPAPRLGINPSRPATTSCTSRPACTAEDCFALPPIVNVF" FT CDS complement(90951..91790) FT /transl_table=11 FT /gene="SCO0110" FT /gene_synonym="SCJ11.39c" FT /product="putative DNA-binding protein" FT /note="SCJ11.39c, possible DNA-binding protein, len: 279 FT aa; similar to TR:O86721 (EMBL:AL031515) hypothetical FT protein from Streptomyces coelicolor (272 aa) fasta scores; FT opt: 123, z-score: 148.4, E(): 0.66, (26.6% identity in 278 FT aa overlap). Contains possible helix-turn-helix motif 40-61 FT aa (+3.21 SD)" FT /db_xref="GOA:Q9RI67" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q9RI67" FT /protein_id="CAB52924.1" FT /translation="MPTNTNRAELRDFLRSRRARVSPEDVGIPATVRRRTPGLRREEVA FT QLAGVGITWYTWLEQGRPINVSSQVLDAVARTLILDAAERDHLYRLAEVPQPPVISDPP FT TELPGHLDTVLEALDPLPAMLVDARTDVLRWNRAYAALHPALVSAPPGKRNTLWQLFAA FT PEGQPRIVNRDEQAPEAVAGFRYRYSQNAGDPRWQDFVARLRTASPLFSRLWTTHDVAP FT PHLCDKRYDITGIGEVSLRATSMELTDHPGVRLVVQTPADRRSRENIDRLLRQATHL" FT CDS 91977..92729 FT /transl_table=11 FT /gene="SCO0111" FT /gene_synonym="SCJ11.40" FT /product="putative oxidoreductase" FT /note="SCJ11.40, probable oxidoreductase, len: 753 aa; FT similar to many egs. TR:O32457 (EMBL:D87924) ORF7 from the FT putative polyketide synthase cluster of Actinomadura FT hibisca (246 aa) fasta scores; opt: 480, z-score: 498.5, FT E(): 2.1e-20, (38.3% identity in 248 aa overlap) and FT TR:Q54810 (EMBL:L35560) reductase from the doxorubicin FT polyketide synthase cluster of Streptomyces peucetius (251 FT aa) fasta scores; opt: 408, z-score: 425.7, E(): 2.4e-16, FT (33.7% identity in 243 aa overlap). Contains Pfam matches FT to entry PF00106 adh_short, short chain dehydrogenase and FT to entry PF00678 adh_short_C2, Short chain FT dehydrogenase/reductase C-terminus and Prosite match to FT PS00061 Short-chain dehydrogenases/reductases family FT signature" FT /db_xref="GOA:Q9RI66" FT /db_xref="HSSP:1FJH" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9RI66" FT /protein_id="CAB52925.1" FT /translation="MSNAFHNKVAVVTGGSAGIGHATARKIAEGGGTVYITGRDQDAAT FT AAAADIPGDVIGVRADSRSTDDLGRLFAQVKRRSGRLDVLVVNAAAIATAPLGTITEDV FT IRTVFDVNITGTIMAVQKALPLLADGGVIVLTGSMAAHKASRGRSLYAASKAGVRALAR FT TWALELTPRGIRVNVVSPGPTDTPGIAQLAATAEEREALIATMGTGTPMTRAGTAEEVA FT AVISFVASDAASHVNGADYQVDGGYGQV" FT misc_feature 91998..92537 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 199.10, E-value 6.7e-56" FT misc_feature 92388..92474 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT misc_feature 92613..92705 FT /note="Pfam match to entry PF00678 adh_short_C2, Short FT chain dehydrogenase/reductase C-terminus, score 32.90, FT E-value 7.4e-06" FT misc_feature 92696..92698 FT /gene="none" FT /note="tta" FT CDS complement(92773..92928) FT /transl_table=11 FT /gene="SCO0112" FT /gene_synonym="SCJ11.41c" FT /product="hypothetical protein" FT /note="SCJ11.41c, improbable CDS, function unknown, len: FT 51aa; predicted by GC Frameplot." FT /db_xref="UniProtKB/TrEMBL:Q9RI65" FT /protein_id="CAB52926.1" FT /translation="MTAETITALVARAAFSCSSKIHAPMLARGRVWGSSPSPGSHQLSQ FT EVVPAR" FT CDS 92961..93257 FT /pseudo FT /transl_table=11 FT /gene="SCO0113" FT /gene_synonym="SCJ11.42" FT /note="SCJ11.42, possible pseudogene, len: 98 aa; predicted FT from codon and amino acid usage but lacking a start codon" FT CDS complement(join(93292..93549,93593..94117)) FT /pseudo FT /transl_table=11 FT /gene="SCO0114" FT /gene_synonym="SCJ11.43c" FT /gene_synonym="SCJ11.44c" FT /product="putative transposase" FT /note="SCJ11.43c, possible transposase, len: 86 aa; similar FT to many eg. TR:O69847 (EMBL:AL023702) insertion element FT IS1647 transposase (150 aa) from Streptomyces coelicolor FT (150 aa) fasta scores; opt: 197, z-score: 294.5, E(): FT 4.8e-09, (42.1% identity in 76 aa overlap). Lacks a stop FT codon and start codon is probably fortuitous." FT /note="SCJ11.44c, possible transposase, len: 174 aa; FT similar to but longer than many eg. TR:O69846 FT (EMBL:AL023702) putative insertion element IS1647 FT transposase from Streptomyces coelicolor (119 aa) fasta FT scores; opt: 276, z-score: 344.8, E(): 7.6e-12, (40.4% FT identity in 114 aa overlap)." FT repeat_region complement(93593..94117) FT /note="Inverted and repeated degenerately at 8087-8935bp." FT CDS complement(94306..94872) FT /transl_table=11 FT /gene="SCO0116" FT /gene_synonym="SCJ11.45c" FT /product="putative tetR-family transcriptional regulator" FT /note="SCJ11.45c, possible tetR-family transcriptional FT regulator, len: 188 aa; N-terminal region similar to that FT of others e.g. SW:ACRR_ECOLI potential AcrAB operon FT repressor (215 aa) fasta scores; opt: 148, z-score: 188.9, FT E(): 0.0037, (39.3% identity in 61 aa overlap). Contains FT Pfam match to entry PF00440 tetR, Bacterial regulatory FT proteins, tetR family. Also contains possible FT helix-turn-helix motif 32-53aa (+3.34 SD)." FT /db_xref="GOA:Q9RI62" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q9RI62" FT /protein_id="CAB52930.1" FT /translation="MSRVSQAQAEENRRRVVDTASRLFREHGTHVSVTDLMKAAGLTHG FT AFYKQFASKEALVDEATAHAFAELAQRYSTGLERHDGQRVAAQRALIDAYLSVEHRDAP FT ADGCPVAALATDIAREGGGEGREARRVYAEGVADFAQFLARDDHDGLVRLCTLFGALVL FT SRATKGLPISGEILAAAHTAVTEEG" FT misc_feature complement(94690..94827) FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 24.20, E-value FT 5.4e-05" FT CDS 94989..95681 FT /transl_table=11 FT /gene="SCO0117" FT /gene_synonym="SCJ11.46" FT /product="putative oxidoreductase" FT /note="SCJ11.46, possible oxidoreductase, len: 230 aa; FT similar to many proposed oxidoreductases eg. TR:O53324 FT (EMBL:AL021646) oxidoreductase from Mycobacterium FT tuberculosis (235 aa) fasta scores; opt: 626, z-score: FT 717.5, E(): 1.3e-32, (50.9% identity in 224 aa overlap). FT Contains Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase and Prosite match to PS00061 Short-chain FT dehydrogenases/reductases family signature" FT /db_xref="GOA:Q9RI61" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9RI61" FT /protein_id="CAB52931.1" FT /translation="MELKNAVAVVTGANRGFGRHLAAQLVERGAKVYGAARRPETVDVP FT GVIPLLLDVTDEASIREATRVASDTTLLINNAGISTGATLLGGDMTEVRRDMETNYFGP FT LATTRSFAPVIEANGGGAVLNVLSALSWFHPAGLGSYAASKAAAWALTGATRDELAPRG FT IAVSALHVGYMDTDMAADVPADQKVDAGEVAAQALYGIETGLPEVLADETSRHVKQSLA FT AAPQPNAD" FT misc_feature 95004..95519 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 121.40, E-value 1.7e-32" FT misc_feature 95370..95456 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 95989..97518 FT /transl_table=11 FT /gene="SCO0118" FT /gene_synonym="SCJ11.47" FT /product="putative xylosidase/arabinosidase" FT /note="SCJ11.47, possible xylosidase/arabinosidase, len: FT 509aa; similar to many xylosidase/arabinosidases especially FT in the N-terminal xylosidase region e.g. SW:XYLB_BUTFI FT xylosidase/arabinosidase from Butyrivibrio fibrisolvens FT (517 aa) fasta scores; opt: 582, z-score: 640.5, E(): FT 2.6e-28, (35.2% identity in 526 aa overlap)" FT /db_xref="GOA:Q9RI60" FT /db_xref="InterPro:IPR006710" FT /db_xref="UniProtKB/TrEMBL:Q9RI60" FT /protein_id="CAB52932.1" FT /translation="MRMYDNPVISGFHPDPSVCRVGDDYYLVCSSFEYFPGLPLFHSKD FT LVHWEQIGNVLDRPGQLPLPVPGAKASGGLYAPTIRHHDGRYWVINTNIDGGGNFVVSA FT RRPEGPWRDPVWIDLPGIDPDLAWEEDGTCWCAFSGPEGGINMARIDPVEGTVLEQPFV FT TWSGSGLKYPEAPHLYRIGDWWYLLIAEGGTERGHSVSVARSRSPRGPWQGAPSNPLLS FT HSGTPRPIQNTGHADLVEAPDGSWWMVLLGVRPRGFTPDVHVLGRETFLTPVEWDADGW FT PLLAPVPVSHAAPGGAWHPVPAPPTRDDFDKHSLAPHWISPFTRHEGSWSLTERPGWLL FT LGATGPTLDRPGYTFVGRRQQHHDCRVTALIDPGTGRGGLCVRLDEAHHYEVEAGDGEV FT RVVARIGPLRQTVARRPVPAGPQHLTVTIRTSDLVPASPELTDGGTTGPDTIAFGLGDP FT DTPDARPLAELDGRYLSTEVACGFTGRVIGMYATEGTVAFDWFEYVPTPSV" FT CDS complement(97760..98281) FT /transl_table=11 FT /gene="SCO0119" FT /gene_synonym="SCJ11.48c" FT /product="putative small secreted protein" FT /note="SCJ11.48c, possible small secreted protein, len: FT 173aa; contains possible N-terminal signal sequence." FT /db_xref="UniProtKB/TrEMBL:Q9RI59" FT /protein_id="CAB52933.1" FT /translation="MSVSRTARRAVLTAAVVCVSTLAVPSTAQAAPLPPACQEALLETL FT DKFPVVDFTVPDKVKNTMTAQVLGMSEADQAVFTEVACAAWNTWATQNGQAVATDLDSR FT YRNAAGPVCNKFARSALATIKKHSPNVPAETREMERVAKTVWRDSMEKLAADATNADCR FT TAYNAVKAGW" FT CDS complement(98463..99338) FT /transl_table=11 FT /gene="SCO0120" FT /gene_synonym="SCJ21.01c" FT /gene_synonym="SCJ11.49c" FT /product="putative integral membrane protein" FT /note="SCJ21.01c, probable integral membrane protein, FT partial CDS, len: >114 aa" FT /note="SCJ11.49c, probable integral membrane protein, len: FT >222aa; contains probable membrane spanning hydrophobic FT regions." FT /db_xref="UniProtKB/TrEMBL:Q8CK69" FT /protein_id="CAD55423.1" FT /translation="MRRHLSLFVTASRYALIGHARNRFAMLLVVVYIPVWIALAYVTIP FT DQPAPFRLRATGEVLSPPGNHLTQITGALNAVTLIAGFMMFAATFTGGAFDRRLAMAGY FT PRFHLVLAKLSALTLVCVAISVYATAVAGFAWTPRQPLLLTAALFGAALTYGALGVVFG FT SVLRREVEGMFAILMISVLDVALQNPLSSSGSDSAVVRFLPTYGAVQASMSAAFSDASG FT GRALLTQCLWLTGASAAAFLVFRRRTRNALVRHRKPPFPAPRGAGGTEGPGVHRPPAES FT GPAPERVGPA" FT CDS complement(99335..99949) FT /transl_table=11 FT /gene="SCO0121" FT /gene_synonym="SCJ21.02c" FT /product="ABC transport system ATP-binding protein" FT /note="SCJ21.02c, probable ABC transport system ATP-binding FT protein, len: 204 aa; similar to many e.g. NUC_ECOLI FT high-affinity zinc uptake system ATP-binding protein (251 FT aa), fasta scores; opt: 327 z-score: 404.3 E(): 3.6e-15, FT 35.2% identity in 179 aa overlap. Contains PS00017 FT ATP/GTP-binding site motif A (P-loop) and Pfam match to FT entry PF00005 ABC_tran, ABC transporter" FT /db_xref="GOA:Q9S205" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q9S205" FT /protein_id="CAB52348.1" FT /translation="MDVHDVHHSYRQHAVLRGVGLRLKPGTLAGIVGENGAGKTTLLKI FT LSGELRPDRGTVHHSGRFGYCPQTVVLDDSFTVRQHLDFFRSAFGLTGLERAEEVMETL FT AFTEYLDQRAGRLSGGSRQKLNLTLALMHDPDVLLLDEPYQGFDWETYLRFWELATRLR FT DAGRSVLVVSHLAYDIDRLDQLWRLEGGRLHIQERPMEAAA" FT RBS complement(99346..99350) FT misc_feature complement(99377..99874) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 147.80, E-value 1.9e-40" FT misc_feature complement(99830..99853) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS complement(99957..99960) FT RBS 100176..100179 FT misc_feature 100190..101563 FT /note="Pfam match to entry PF00743 FMO-like, Flavin-binding FT monooxygenase-like, score 47.90, E-value 7.5e-25" FT CDS 100190..101566 FT /transl_table=11 FT /gene="SCO0122" FT /gene_synonym="SCJ21.03" FT /product="putative flavin-containing monooxygenase FT (putative secreted protein)" FT /note="SCJ21.03, probable flavin-containing monooxygenase FT (putative secreted protein), len: 458 aa; similar to many FT eukaryotic monooxygenases, e.g. FMO5_RABIT dimethylaniline FT monooxygenase [N-oxide forming] (532 aa), fasta scores; FT opt: 938 z-score: 1016.9 E(): 0, 38.7% identity in 432 aa FT overlap. Also similar to S. coelicolor putative FT oxidoreductase SCH35.27 E(): 3.4e-07, 34.8% identity in 282 FT aa overlap. Contains Pfam match to entry PF00743 FMO-like, FT Flavin-binding monooxygenase-like" FT /db_xref="GOA:Q9S204" FT /db_xref="InterPro:IPR002257" FT /db_xref="UniProtKB/TrEMBL:Q9S204" FT /protein_id="CAB52349.1" FT /translation="MRRTCVIGAGPSGLAASRVLASRGIPFDCYEAGSGIGGLWRYGND FT NGMSGVYASLHANISKESMSFSSLPMPDSYPVFPHHTQVLAYLESYAETFGLHGHIGLR FT TEVTSVRPVEGGGWEVTRRSRGGAEAETDRYTEVVVANGHHWDPRLPDPAVPGAGVFEG FT SAVHAHAYRSPEPYAGQRVLVVGMGNSGCEIAAEISRSAARTFLSARAVAHVFPKMLLG FT RPADHWAVSRAAVLPRFLKDPGMALLLRLARGAPALYGLPEPVRRPLAAHPSTSDELLV FT QLARGAVTAKPGIRSFGRDSVSFTDGSRETVDAVVYATGYSLSFPFLAPAVFAAPDGRT FT ELYLRTVPPRLPGLFFMGLAQPAGAAFPLLEPQAEWIADLIEGEVLLPTPAEMTRSIAR FT ARERHDKVYAPSYRHGIEIDICAYRRALRRELRAGRRRARRADARRPDAPRPAPVSDTV FT " FT CDS complement(101656..103002) FT /transl_table=11 FT /gene="SCO0123" FT /gene_synonym="SCJ21.04c" FT /product="conserved hypothetical protein SCJ2.04c" FT /note="SCJ21.04c, unknown, len: 448 aa; some similarity to FT M. tuberculosis hypothetical protein TR:P71694 FT (EMBL:Z95844) Rv1425 (459 aa), fasta scores; opt: 150 FT z-score: 166.6 E(): 0.063, 23.9% identity in 464 aa FT overlap" FT /db_xref="UniProtKB/TrEMBL:Q9S203" FT /protein_id="CAB52350.1" FT /translation="MSAPPTAPADPSTGSDRPKRSVPPPRHPTHAVDRAFLDLERRRPE FT VRWDAGGVAYLSGPPPSLADLRAYVAFRLGELPLLTSRVTGGRRPGWQPSEDFPVDRHV FT YEVVADGPADWDTALHSALNAPFAPGAYWGVWLIHGHEPDAYALCYRFLHACQDGSAAA FT MTFRAMLGDGEPSARPLPGGSGVFGVPRRFGAAVALATRFLARTFTVRRHRPDPAFAPA FT GERRLWRGRVPVDTLRLIGAGRGGSAHDAHLAALAGALSVWAARSGVPLPRVTAVLPVD FT ARRADEEQTWGNRCFALPVDLPVGPAPGRPDGSPDEEAPLRRLDQIMAVTRKLRGDTWR FT QAVQDLVRYMPDRPTAWYLRRMLSPRVTNVMATSMPLAEKGSLGETRVTGTALLPLLVP FT GHLCGVGLSFFGDWAEVSFVADRALPLGELLPELWEQAVRELAESVQRG" FT CDS 103628..104989 FT /transl_table=11 FT /gene="SCO0124" FT /gene_synonym="SCJ21.05" FT /product="hypothetical protein" FT /note="SCJ21.05, unknown, len: 453 aa; similar in part to FT several polyketide synthases, e.g. HETM_ANASP polyketide FT synthase HETM (506 aa), fasta scores; opt: 252 z-score: FT 267.0 E(): 1.6e-07, 33.7% identity in 199 aa overlap, and FT TR:Q50858 (EMBL:U24657) saframycin MX1 synthetase A (2605 FT aa), fasta scores; opt: 244 z-score: 248.0 E(): 1.9e-06, FT 28.5% identity in 372 aa overlap. Contains TTA Leu codon; FT possible target for regulation by bldA" FT /db_xref="GOA:Q9S202" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S202" FT /protein_id="CAB52351.1" FT /translation="MRGAIADDDPRGTVDAVPLVSASGPPHRRCSASARPARRGTAPLT FT ALGATLVHVALTGATGFLGLRLLRRLLDTHAWVTVLAHAGSGDALHRITRSLELMGAPS FT AFLARLPERLRVVETDLALPRLGLSARAFRELADSLGAIWHSAGSIHLEGDLPELRRTN FT VEGTRHVLELAAAGRAEPVVRHVSTAFVAGARRTGVAYEDELDDGAGFENAYEQSKYEA FT ELLVHAWSREHGRPALVLRPSILVTDVPSHPELPSHPLQVVERILRDARRATVAAPPTA FT TSSPNGAPDGSSRGAHGLPGPRARPRVRTVGHPHGRLNLLPVEHAADVMVRLSELPSSH FT GVDTYHVVHDRDVPVPTVVALLERLVPLSIDLVDAKPEDPSALETMIDFYPGITAYLTH FT RRRFDDTRVRTLLGPAAVCAPVGLDGLWSGLAPRSGALPRPPDSPPAPAPTPCA" FT misc_feature 103829..103831 FT /note="TTA Leu codon; possible target for regulation by FT bldA" FT RBS 105048..105051 FT CDS 105057..106640 FT /transl_table=11 FT /gene="SCO0125" FT /gene_synonym="SCJ21.06" FT /product="possible oxidoreductase" FT /note="SCJ21.06, possible oxidoreductase, len: 527 aa; FT similar to hypothetical proteins associated with fatty acid FT or polyketide biosynthesis e.g. TR:O33907 (EMBL:U73935) FT hypothetical protein in eicosapentaenoic acid synthesis FT gene cluster from Shewanella sp. (543 aa), fasta scores; FT opt: 1474 z-score: 1595.4 E(): 0, 48.1% identity in 472 aa FT overlap; and TR:Q44210 (EMBL:U04436) ORF in region required FT for nitrogen fixation in Anabaena 7120 (442 aa), fasta FT scores; opt: 1395 z-score: 1511.4 E(): 0, 47.7% identity in FT 440 aa overlap. Also shows some similarity to predicted FT oxidoreductase from M. tuberculosis TR:O33323 FT oxidoreductase RV2781c (344 aa), fasta scores; opt: 161 FT z-score: 179.6 E(): 0.012, 26.7% identity in 277 aa FT overlap" FT /db_xref="GOA:Q9S201" FT /db_xref="InterPro:IPR014179" FT /db_xref="UniProtKB/TrEMBL:Q9S201" FT /protein_id="CAB52352.1" FT /translation="MSVLAAPRALAARPPVFSPEGIAEIVRLIREPVHVVSGPGGRELG FT LATGAPPAGPVLGTLPPLYPEWLGGRTFCEAHGVRFPYVAGEMANGIATTGMVAAMARA FT EMIGFFGAGGLPLPEVERAVHSLAQELESRTNWGVNLIHSPAEPELEWRVAELLLRCGV FT PRISVSAFMELTPAVVLCSAQGLRRGADGGVVRRTRLLAKLSRPEVAERFLSPAPPALL FT DLLVARGSLTREEAALAALVPVAEDITVEADSGGHTDNRPLSVLLPRIAALRDTVCRRF FT GYRRPVRLGAAGGLGTPDAVAAAFALGASYVVTGSVNQTAVEAGLSDEAKAMLCDADVA FT DVAMAPSADMFELGVKLQVLSRGTMFARRAGRLYSAYRDHGSLEEIPPALRAAIERDVL FT GAPFEEVWQRTRAFWEERDPAEAVRAEADPRHRMALVFRWYLGSSSRWAITGESTRRAD FT YQIWCGPAMGAFNRWAAGTFLAEPPHRSVTQIALNLLEGAATLTRAHQLRTYGVPLPSE FT AFTYTPRELA" FT CDS 106637..112885 FT /transl_table=11 FT /gene="SCO0126" FT /gene_synonym="SCJ21.07" FT /product="putative multi-domain beta keto-acyl synthase" FT /note="SCJ21.07, probable multi-domain beta keto-acyl FT synthase, len: 2082 aa; similar to proteins involved in FT fatty acid or polyketide biosynthesis e.g. TR:O30776 FT (EMBL:) heterocyst glycolipid synthase HglE (1053 aa), FT fasta scores; opt: 2382 z-score: 1897.1 E(): 0, 41.6% FT identity in 1013 aa overlap, and TR:O54142 (EMBL:AL021530) FT S. coelicolor polyketide synthase RedX (982 aa), fasta FT scores; opt: 910 z-score: 728.5 E(): 0, 37.4% identity in FT 494 aa overlap. Contains 2x Pfam matches to entry PF00109 FT ketoacyl-synt, Beta-ketoacyl synthase, and Pfam match to FT entry PF00550 pp-binding, Phosphopantetheine attachment FT site" FT /db_xref="GOA:Q9S200" FT /db_xref="HSSP:1MLA" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S200" FT /protein_id="CAB52353.1" FT /translation="MSGPAAAAPSAAARPRGETMSGSTPRQVPVAVVGVGALVPGATDA FT AGYWRVVTGGRDLITEVPASRWRVEDHYDPDPAAPDKTYARRGAFLPEVDFDPMAYGVP FT PANLPATDTSQLLALMVADQVLRDAGGTSGIDRDRTGVVLGAAALELLPHMYGRSQRPA FT WLAGLRESGLDEAKAQAVCDRIAARFEPWRESTFPGLLGNVVAGRIANRFDLHGVNHTT FT DAACASSLAALSTAVGELSLHRADLVISGGVDTGNDIGMFLCFSKTPALSPSGDCRPFA FT EAADGTMLGEAVVMYALKRLSDAERDGDRIHAVIRGIGTSSDGRSTAIYAPLPEGQERA FT LRRAYEEAGYPPETVELVEAHGTGTKAGDTAELAALNAVFGASGRPDGQWCAIGSVKSQ FT IGHTKCAAGAAGLLKAVMALHHKVLPPTVKVERPNPAAAAPHGPFYVNTQARPWVRPAG FT HPRRAAVSSFGFGGSNFHVTLEEYAPPTVPTPSSGTHAGTPARPAPKNTGRPALRHRTA FT SSELVLFAAASPSALEERLPEDGRPLAALARESHAAFSPTARVRLAVVAADTDDLRGKY FT AQALAHIRRRPEASFSAPSGIRYAYGEPAPGRIGFLFPGQGSQYVGMGAELAMLAPTAQ FT AVWDRLGSIRFDGRPLHRAVFPPPAFTEEERAARAALLNATEWAQPALAVHALALLAVV FT RELGLRPDCVAGHSFGELVALHCAGALDAESLVGLARRRGELMREAAATPGAMLAVAAD FT RVRVAEVLAGGGFEDIWPANHNSPRQTVLSGSAAAVERARSAFSAAGIASRGLSASTAF FT HSPLVAPAVEPLAAHLRTVTFSEPRIEVYGNTDAAPYPSCPDAVRRRVAGHLASPVLFQ FT DQIEAMYAAGVRTFVEVGAGATLTGLVGQILGGREHAAVPLDRPAGAGADTFHAALGEL FT AVRGVPLDLNPLWTPYASPVTPAKEREPRMTVKISGANYGQLPPSGTPHVEPTPAPDHG FT PRPDAVPAVAAPVPAVALPSQAPGDVPLPPVYEPAAASSPQEFGPSHPAEAPADARPVI FT GDDRQLAVESIHRQTAETHLACQRLLTDSHMAFLRMTETTLAALLGAPVPGAVPGMTAP FT AALPLPRSVGPLDVPAAVAPPVAAPAPAAVVGAATPYPVPEASAPPASAAMRPSVSEPA FT PPAQAPARDASAPDRSAPEPTPSELSSSELEELLLSVVADLTGYPTAMLHVDMDLEADL FT GVDSIKRVEILSAVRRRVGDVAVGDAGRLGKLRTLREITAALASGARTAGPAPEPDVPV FT VPAPRADAFEPSPAKARAAAPFSTTVDVPAVRGDGSEPSADEAGVDGWTPLTRLVPRMV FT ESPVCGLATAGLLDGPVVVSGEDVAGCPVVGLVARKLAERGVDATAVAEVPEGARGVVH FT LGGLSASGTPDEAREVHRSALRAARALAPRAAGGGGLFVTVQDTGGDFGLGGHAPGRAW FT LGGTAGLARTAAKEWPDVRVRVLDCERGGRDDEEVADAIVSELLEGGADTEVGLRADGT FT RALLRMVPGPLTPGGAPRIGENSVIVATGGARGVTAAALLDLARTHRPRIVLLGRTEAA FT AEPAGLASATDERALTRLLAQRAGDAEESSPARIAEEARRILAAREVRATLAGLEAAGS FT PARYVRVDVRDADALTAALREVRATWGPVTGIVHGAGVLADKRIADKTDEQAEPVMATK FT VDGLRALLSATADDPLDTILLFSSVAAVFGNAGQSDYAMANEVLQQVASAEQARRPDCL FT VRCVAWGPWQGGMVTPALAAHFGRAGVPLIPPAQGAAACTAELNGAAGQARVVLTAGDG FT PTAADERLRAQVLVSSDTLPQLADHAPAGVPVLPVALVLNWFAGAAAAWLPAEGQLVLR FT DLRVYRKYDLPELEGVGHRLTVLGNRGAPGSPAGVEAELRGEEGPAHFRAVVDTGDGAP FT DPSRWDTPADLKPLDVSAPYDGGVLFHGPRFHALREVRGVSEHGAEATVAGLRSLGWPG FT GRGPLDPAAVDGALQLALLWGEKVLGAATLPMAVAECRVYRRGPVDDAVRCVVRERKVH FT DTGARCDAALIGPGGSVLLELTGVELVSRPS" FT misc_feature 106724..108088 FT /note="Pfam match to entry PF00109 ketoacyl-synt, FT Beta-ketoacyl synthase, score 370.70, E-value 1.6e-107" FT misc_feature 108461..109447 FT /note="Pfam match to entry PF00698 Acyl_transf, Acyl FT transferase domain, score 210.50, E-value 2.5e-59" FT misc_feature 110228..110437 FT /note="Pfam match to entry PF00550 pp-binding, FT Phosphopantetheine attachment site, score 20.50, E-value FT 0.00048" FT CDS 112932..119654 FT /transl_table=11 FT /gene="SCO0127" FT /gene_synonym="SCJ21.08" FT /product="putative multi-domain beta keto-acyl synthase" FT /note="SCJ21.08, probable multi-domain beta keto-acyl FT synthase, len: 2240 aa; similar to proteins involved in FT fatty acid or polyketide biosynthesis e.g. TR:Q44221 FT Anabaena sp. type 4 polyketide synthases HglD (fragment) FT (448 aa), fasta scores; opt: 760 z-score: 639.3 E(): FT 2.9e-28, 38.0% identity in 392 aa overlap; MCAS_MYCBO FT mycocerosic acid synthase (2110 aa), fasta scores opt: 707 FT z-score: 586.8 E(): 2.5e-25, 35.4% identity in 560 aa FT overlap; and TR:O54142 (EMBL:AL021530) S. coelicolor FT polyketide synthase RedX (982 aa), opt: 658 z-score: 550.3 FT E(): 2.7e-23, 36.4% identity in 470 aa overlap. Contains FT Pfam match to entry PF00109 ketoacyl-synt, Beta-ketoacyl FT synthase, Pfam match to entry PF00698 Acyl_transf, Acyl FT transferase domain, and 2x Pfam matches to entry PF01377 FT Thioester_dehyd, Thioester dehydrase" FT /db_xref="GOA:Q9S1Z9" FT /db_xref="HSSP:1MKA" FT /db_xref="InterPro:IPR014030" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z9" FT /protein_id="CAB52354.1" FT /translation="MRFEPIAIVGRGCVLPGALDPDGFWENVAAGRTSLTAAPEGRWRL FT PRHRVMGTVDDHLDRTWTDIGGYVEGFESVFDPEGFLLPPERIATLDPLFHWVLYGVRQ FT ALTEAGRTTPLRRGGLILGNLSYPTPTGAAFAEHVWLSAQRPQLREALLTGGRHPRPDA FT RNRFSSGLPALLAARALGLGAGAWSLDAACASSLYAIKLACDRLHDGTADLMVAGAASR FT PDPLYLHVGFCGLSATSRTGRSRPFDRDADGLVHGEGAGFVALTRLSDARAAGLPVFGV FT IRGVGLSNDGRGSGLISPSEEGQVRAMRLAYEVAGVAPESVSLVECHATGTPVGDAVEA FT RGMARVFGASDDVPIGSAKSNIGHLLASAGVAGLLKVLGAMRAGVRPATLGARRPLDAL FT SGTPLRVLDTAEQWAGPRRAAVSAFGFGGTNAHLLLDDPDDAPPPSVPRPAYGPRPTAR FT RAAPADRAPQDPVPGPDAPDTPAAAADSGAPGDRTPGACAVPVAIVAIGARVGEGTSVE FT DLRQAVLGGERRGPVAEIAVQLTGLCFPPLALERTVRHQLLVLEAAREAARTVNLPRER FT TMVVIGTGVDPEVARAGARWRIPHWLEESGVPVTAASADLARDAFTPPMTAEGVVGSMP FT NLAANRISTQLDLAGPSFTVSAEEASGLVALEAAARALRSGEVDAALVGATDLSCEAVH FT RAAVRESAPGVEPGDAAVVLVLKLLDAARRDGDTVVAVLDEEAGGEPDMVIGDGPDAGF FT DPASAFGRAHAASGLVSVAVAALSLQHRVVPRPDASADTTAVTHTARAVAVPVEGPAMS FT VRLRAGDPRPWLPGPAPRLRVFSGADRAQVLAALEAGTESSAGPARLALVADGGTAWAE FT RREAARRWLAEGGARPADVLYRDAPVGGETAFVYTNGSAAYPGMGHALTLACPSLGESV FT RAGHRAIGTRLRSGRGPGVLDQIWSVAELAVFHTVFSREVLGLRPDAAIGYSSGESTAL FT VALGAWPDASGLYEATRESGLFTTELTGELRAVRRYWRQRGIGGDRWSSYLVAAPLEAV FT RAELAGERAVHLMAVNAPGVCVVGGESKACAAVVARLGVDRAIELDYDMAAHAPELAEV FT REVWREAHRRPTVEVPGVRFYSGATGRAYRPTTERAAEALTAQGLGTIDFAATIERAWA FT DGVRVFVEHGPRKLCTGWIKRVLGDREFVAVALDAPDDTGLRNLCLAVGELVVAGVPVR FT ADALTARLEEAATGLPAPGPAVTVAVPLTPCLPPLEPAVTVLPRAPELAPVPAERPAPG FT ERPGAPVAAGPAAAVGPVARLSDPASPAPGSPGVAGTVARQSRRAALVHEEIMAAHAEA FT HRRFLHVSALAVTALTAGGRADAGRAAVSLPPGGVASVPASAALPVRPPCAPPVPVRPR FT GPVPAPRPGTAPAAVPVPGAKPVFDRAQLEHLASGEISTLFGPRFAEQDRYAVQTRMPG FT PPMLFADRVTAIDAVPAALVLPGPVRTDGRIWTETDVLTDSWYLDATGRMPAGVLIEAG FT QADLLLLSWLGADLLNRGERAYRLLGCEVTFHGGPPRPGDTLCFEIHVDGHAEAGGVRL FT AFFHYDCYVDGELRLSVREGQAGFFTPAELATSGGVRWDPAEHAPGDDLPFDPPAVRCE FT RSHFGTDRVRALAQGSPAECFGQGWEATAAHVRTPLLDGERLRLLDEVTVFDPVGGPWG FT RGYLRAETAVSPDDWFFTGHFKNDPCMPGTLMLQGGLQAMAFYLTASGHTVDRDGWRFE FT PVDTQPSRTKCRGQATPESRRIVYELFVRGVSAGPVPTLHADVLGSVDGRKAFLGRGMA FT LRLVPDWPLSQWRDSGPPAVQEDGAPVPPPRLGGLSGHREAKAVAVAADGFRFDYASLL FT ACAWGRPSEAFGTMYEPFDGTRRVARLPGPPYHFMSRIVSVDGVQGGMREGSVVVAEYD FT VPERAWYFEQNPSRCMPLAVLMEVALQPCGWLASYAGSATTSEQDLLFRNLDGVKTVTG FT EVTAGTRTIRTRAELTRVSRSGDMIIESFRVVCTADDAPLAELTTVFGYFPRSAFDDQQ FT GLPVPAEERARLDEPCNRVVDLTARPARYCAGEPRLPGRMLLMLDRVTGSWPEGGTAGL FT GRLRSEKDVHPDAWFFRAHFFQDPVQPGSLGVEAMCQLLQYHLIEGGAADGIAHPRFEP FT VLPGRETVWTYRGQITPANRLIRVDMDIVETGTDARGPYAVADATLWGDDTCIYRVRGL FT GMRVVSGPPPVR" FT misc_feature 112947..114248 FT /note="Pfam match to entry PF00109 ketoacyl-synt, FT Beta-ketoacyl synthase, score 255.20, E-value 9.1e-73" FT misc_feature 115632..116603 FT /note="Pfam match to entry PF00698 Acyl_transf, Acyl FT transferase domain, score -20.20, E-value 9.5e-09" FT misc_feature 117936..118361 FT /note="Pfam match to entry PF01377 Thioester_dehyd, FT Thioester dehydrase, score 50.00, E-value 5.2e-11" FT misc_feature 119151..119531 FT /note="Pfam match to entry PF01377 Thioester_dehyd, FT Thioester dehydrase, score 30.60, E-value 1.8e-07" FT CDS 119651..119833 FT /transl_table=11 FT /gene="SCO0128" FT /gene_synonym="SCJ21.09" FT /product="hypothetical protein SCJ21.09" FT /note="SCJ21.09, unknown, len: 60 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z8" FT /protein_id="CAB52355.1" FT /translation="MICSALQREVGRQARTTAVLAAAVPVRAGQVAFPCPGGDAFWVRL FT VDRRLAAMQAAGAEG" FT CDS 119841..120215 FT /transl_table=11 FT /gene="SCO0129" FT /gene_synonym="SCJ21.10" FT /product="hypothetical protein SCJ21.10" FT /note="SCJ21.10, unknown, len: 124 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z7" FT /protein_id="CAB52356.1" FT /translation="MAVQLSASDGGGRQECAGAPGCSVGCVEAAADGDRLGGGGEVDVG FT FRQTYPRQSTGGCLPTVHMPGWERSRRPCSRWDGVSCHSWPQSGFRHRMSLGEPVWVDL FT VPRSVSRDVLLYAEAVLPTV" FT RBS 120446..120449 FT CDS 120457..121371 FT /transl_table=11 FT /gene="SCO0130" FT /gene_synonym="SCJ21.11" FT /product="putative beta-lactamase" FT /note="SCJ21.11, possible beta-lactamase, len; 304 aa; some FT similarity to S. coelicolor TR:CAB39710 (EMBL:AL049485) FT putative beta-lactamase SC6A5.26C (310 aa), fasta scores; FT opt: 197 z-score: 236.5 E(): 8e-06, 28.1% identity in 295 FT aa overlap, and TR:O34760 (EMBL:AF008220) Bacillus subtilis FT YtnP (256 aa), fasta scores; opt: 189 z-score: 228.5 E(): FT 2.2e-05, 25.1% identity in 191 aa overlap and similar to FT TR:Q9ALW1 (EMBL:AF338729) Plesiomonas sp. M6 methyl FT parathion hydrolase Mpd, 331 aa; fasta scores: opt: 511 FT Z-score: 578.8 bits: 115.3 E(): 1.3e-24; 31.61% identity FT in 310 aa overlap" FT /db_xref="GOA:Q9S1Z6" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z6" FT /protein_id="CAB52357.1" FT /translation="MNQINAARPDAPARDEAVPSRYALKVGDIDVTVISDGVLAINPAT FT LATNADKAELSAWLRDNFLPPEVIDYPLNVSVVRSGDRTILIDSGLGTEFPGFPRAGQL FT AMRLDAAGIDPASVTDVVLTHLHMDHIGGLLVEGLRGRLRKDLRVHLAAAEAEFWQAPD FT FSRTAMPAPVPETLVTTAARFLDVYRGQLRPFETEFEVAPGVRIERTGGHTPGHSIVRL FT ESGGERLTFAGDAVFQCGFDQPGWYNGFEHDPEESARVRMALLKEMAASGEHLMASHLP FT FPSVCHVATAGNAFRFVPTVWDY" FT CDS complement(121617..122456) FT /transl_table=11 FT /gene="SCO0131" FT /gene_synonym="SCJ21.12c" FT /product="putative secreted protein" FT /note="SCJ21.12c, probable secreted protein, len: 279 aa; FT similar to hypothetical proteins e.g. YBHP_ECOLI (253 aa), FT fasta scores; opt: 244 z-score: 290.0 E(): 8.4e-09, 29.5% FT identity in 251 aa overlap. Also similar to S. coelicolor FT TR:Q9ZBN3 (EMBL:AL034492) SC6C5.12C (276 aa), fasta scores; FT opt: 474 z-score: 555.0 E(): 1.5e-23, 41.0% identity in 278 FT aa overlap" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z5" FT /protein_id="CAB52358.1" FT /translation="MFRRTLPVLAAAVGLAAAAAGPATADDVPADRLPGHRVLDVMTFN FT IHHAQGTDDVLDLRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLGYHVV FT FGANIDNSPPAPGGHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDVHGKK FT VEFYNTHLAAGSQADRLQQTAQVVDLIGTRKPGILVGDFNALPAAPESRPLQNAYTDAW FT AKSLHARGDGATYPAQSPTERIDLIYATRRVTPLVAQVLKDDPAASDHRPLLGKVLV" FT RBS complement(122463..122468) FT CDS 122743..125502 FT /transl_table=11 FT /gene="SCO0132" FT /gene_synonym="SCJ21.13" FT /product="probable transcriptional regulator" FT /note="SCJ21.13, probable transcriptional regulator, len: FT 919 aa; similar to many e.g. TR:AAD28307 (EMBL:U95170) FT Rhodococcus erythropolis ThcG (927 aa), fasta scores; opt: FT 1176 z-score: 1258.4 E(): 0, 34.2% identity in 933 aa FT overlap, and TR:AAA53487 (EMBL:U03114) Streptomyces albus FT LipR (890 aa), fasta scores; opt: 740 z-score: 791.4 E(): FT 0, 31.1% identity in 952 aa overlap. Contains PS00017 FT ATP/GTP-binding site motif A (P-loop), Pfam match to entry FT PF00196 GerE, Bacterial regulatory proteins, luxR family, FT and probable helix-turn-helix motif at aa 871-892 (Score FT 1389, +3.92 SD)" FT /db_xref="GOA:Q9S1Z4" FT /db_xref="HSSP:1FSE" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z4" FT /protein_id="CAB52359.1" FT /translation="MVRKLRLRGRLGECDALDRLTGTVMSERSAVLVVRGEPGIGKSAL FT LDHYAERISRHRVVRVAGVESEMELPFAGLHQLCAPFLGHLDRLPDPQSEALATAFGLS FT SGPPPDRFLVGLAVLSLLSDAANEDPLFCLVDDAQWFDEVSAQTLGFVARRLLAEPVAL FT VLATREPPGQAPLAGLPELVLKGLEDAEARALLDGALRGELDDRIRDRILDEARGNPLA FT LLELPRGLTATETAESFGPPAPAPTADRIEQSFLRQVSSLPVATRRLLLVAAAEPIGDA FT VLLRRAARQLGIEPGATAPAEEAGMIDIGALVRFRHPLLRSAVYRSAGLLERQETHRAL FT ADVTDRALDPDRRAWHLAWATLAPDEAVAAELQTSAVRAQSRGGVAAAATLLAYAATLT FT PEPRVRAARAVAAASAKLRAGAPDAARKLLTMAEGGPLSEFDQARAHLLRAQIAFASSR FT VSQTAPLLSAARGLVPLDAALARETFLDAISAAMFAGRLSADADVGAVARAAREALPET FT EGPRTADLLLRTLAVRFGTGYRDALPLAKRAVGRLLVEPDAGEVLRWSWLTSAVAADMW FT DDEGWAALAARHVRTARATGALSELPLALNSQVLVDLFAGALDAASLLTAEIPTVLEAA FT GGDLAPYGALTLAALKGDGPHAEQLIRSSLEDSAARGEGIGVGIAQWARAVLCNGAGKY FT ERARQAADQAAAHTKDLAAVNWGLCELVEAAVRSGDRDTAVDALDRLDEATGGAGTDWA FT LGVQARARALLGTGTAAETLYREAIERLARTRVRTELARAHLVYGEWLRRENRREDARA FT QLRTAHAMFTGFGAGAFAQRSGRELHALGERTVGRPAAAPTALTAQETQIAHLARDGLT FT NAEIGAELFISPHTVEWHLRKVFAKLGITSRRQLRSSLGDRPLAPAPA" FT misc_feature 122848..122871 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 125296..125493 FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 59.20, E-value FT 8.8e-14" FT CDS complement(125625..126005) FT /transl_table=11 FT /gene="SCO0133" FT /gene_synonym="SCJ21.14c" FT /product="hypothetical protein SCJ21.20c" FT /note="SCJ21.14c, unknown, len: 126 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z3" FT /protein_id="CAB52360.1" FT /translation="MLLEMDPPGLETIPGAELADRTRPMDDGARQTVNGPSTGSRADGA FT QSVTWLIGVPFRAQGSRLVWMYYVVDGAGDDLHAVQTAMERAYTAEERRARGDAGAATE FT PLKIQRILRDAIGRVTLNACQS" FT RBS complement(126014..126017) FT CDS complement(126989..127294) FT /transl_table=11 FT /gene="SCO0134" FT /gene_synonym="SCJ21.15c" FT /product="hypothetical protein SCJ21.21c" FT /note="SCJ21.15c, unknown, len: 101 aa" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z2" FT /protein_id="CAB52361.1" FT /translation="MALRATVRGRAPRPEARGGSITPGPGWQHVGGPFLSRAHCLTALA FT AYRAHDPGREYRYGTDGAGSWNVYLEALPTYGPDGTGTSSAGRGRPALRIVRPDEH" FT CDS 127571..128290 FT /transl_table=11 FT /gene="SCO0135" FT /gene_synonym="SCJ21.16" FT /product="conserved hypothetical protein SCJ21.22" FT /note="SCJ21.16, unknown, len: 239 aa; similar to two FT hypothetical proteins from S. coelicolor TR:O86620 FT (EMBL:AL031155) SC3A7.19 (232 aa), fasta scores; opt: 188 FT z-score: 222.0 E(): 5.1e-05, 33.6% identity in 238 aa FT overlap, and TR:Q9ZBN4 (EMBL:AL034492) SC6C5.11 (327 aa), FT fasta scores; opt: 149 z-score: 176.2 E(): 0.018, 30.0% FT identity in 203 aa overlapand to TR:Q988L9 (EMBL:AP003009) FT Rhizobium loti MLR6684 protein, 259 aa; fasta scores: opt: FT 764 Z-score: 831.4 E(): 1.1e-38; 51.883% identity in 239 aa FT overlap" FT /db_xref="InterPro:IPR019793" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z1" FT /protein_id="CAB52362.1" FT /translation="MTSGKPTVVLVHGAFADSSSWNGVVERLQSHDYRVVSASNPLRGL FT TSDAAHVRELVAAIDGPVVLAGHSYGGSVMSVAAKGLGNVRALVFAAAFLPEVGESAIA FT LSGKFPGSTLADVLRPVPVTLLDGSQAADLYIEQSAFHQQFAADVPAETTAVMAAIQRP FT VTDAALGEGASAAAWKDIPSWVLVATEDRNIPAQTQLFMAERADATVMSLTSSHAVSVS FT RPGDVARLVNEAAQATA" FT CDS complement(128634..130184) FT /transl_table=11 FT /gene="SCO0136" FT /gene_synonym="SCJ21.17c" FT /product="putative integral membrane protein" FT /note="SCJ21.17c, probable integral membrane protein, len: FT 516 aa; similar to SGAT_ECOLI putative transport protein FT SGAT (484 aa), fasta scores; opt: 339 z-score: 341.6 E(): FT 1.1e-11, 28.5% identity in 414 aa overlap. Contains FT probable membrane spanning hydrophobic domains" FT /db_xref="GOA:Q9S1Z0" FT /db_xref="InterPro:IPR007333" FT /db_xref="UniProtKB/TrEMBL:Q9S1Z0" FT /protein_id="CAB52363.1" FT /translation="MDWVIDTAKFLVNEILSQPAYLIGIITAVGLAALKKSVGQTVGGA FT IKATLGLLLVGAGAGLVSSSLDPLGRMIQGTTGTHGVIPTNEAIVGIAQSEFGARVAWL FT MILGFLVSLALARFTPLRYVFLTGHHMLFMATLLTIVMATAGQGSVAVVLGGGVLVGIL FT LVALPAFAHPWTKKVTGNDTLAIGHFGTAGYIVSGATGQLVGKNSRSTEEMKLPEGLRF FT LRDSMVATALSMVLIYLVMSLLFLAKVGQDAAFKAFAGSGGDPAADVGNYLMQSVMQGL FT QFGIGVAVILFGVRTILGELVPAFQGIAGRVVPGAKPALDAPIVFPYAQNAVLIGFIFS FT FLGGLTGLAALIWVFNPAFGLALVLPGLVPHFFTGGAAGVYGNATGGRRGAAVGSFLNG FT LLITFLPAILLKALGSFGEANTTFGDADFGWFGAVLGSIGKLDGTAGLIGMLIFGLLIL FT AGAWIMQTKVVDRGWIPGGGITAAPAEAAAVVPAQAAGTATYAKIAPPRGAPAPPPAP" FT RBS complement(130196..130199) FT CDS complement(130201..131001) FT /transl_table=11 FT /gene="SCO0137" FT /gene_synonym="SCJ21.18c" FT /gene_synonym="SCJ33.01c" FT /product=" possible sugar-transport protein" FT /note="SCJ21.18c, unknown, partial CDS, len >170 aa" FT /note="SCJ33.01c, putative sugar-transport protein, partial FT CDS, len: > 138 aa. Similar to many e.g. Escherichia coli FT SW: PTXA_ECOLI (EMBL; U14003) unknown pentitol FT phosphotransferase enzyme II, A component (EC 2.7.1.69) FT (154 aa), fasta scores opt: 313 z-score: 403.6 E(): FT 4.1e-15 38.3% identity in 133 aa overlap. Overlaps with and FT extends into CDS SCJ21.18c. Contains a Pfam match to entry FT PF00359 PTS_EIIA_2, phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 2." FT /db_xref="GOA:Q8CK68" FT /db_xref="InterPro:IPR003501" FT /db_xref="UniProtKB/TrEMBL:Q8CK68" FT /protein_id="CAD55424.1" FT /translation="MSALTDLLSVDGIRLDVEVEDWRSAVRASGQVLVDEGISTAEYTE FT AMIRNVEENGPYIVIAPGFALAHTRPFDAVLKTGMSWVRLASPVVFGHETNDPVQLVVA FT LAAVDSKAHTAALAALAKVLADGDNVRALQQATSPEEVLRVLKGEPTGTGGPGGSRATS FT AKDAAPALSEQKILTVCGNGVGTSLFLKNTLEQVLDRWGWSRQVSVEATDTISAKGKAS FT EAVAILTSQEIARTLGDVGIPVKVVRDFSSTTEVDAVLRDTYDV" FT misc_feature complement(130738..130929) FT /note="Pfam match to entry PF00359 PTS_EIIA_2, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 2, score 37.60, E-value 4.9e-09" FT RBS complement(131011..131018) FT CDS 131523..132296 FT /transl_table=11 FT /gene="SCO0138" FT /gene_synonym="SCJ33.02" FT /product="putative oxidoreductase" FT /note="SCJ33.02, possible oxidoreductase, len: 257 aa. FT Similar to many other putative oxidoreductases including: FT Streptomyces cinnamonensis SW:DHKR_STRCM (EMBL; Z11511) FT monensin polyketide synthase putative ketoacyl reductase FT (EC 1.3.1.-) (261 aa), fasta scores opt: 386 z-score: FT 426.3 E(): 2.2e-16 35.8% identity in 260 aa overlap. FT Contains a Prosite hit to PS00061 Short-chain FT dehydrogenases/reductases family signature and a Pfam match FT to entry PF00106 adh_short, short chain dehydrogenase." FT /db_xref="GOA:Q9RIX5" FT /db_xref="HSSP:1FJH" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9RIX5" FT /protein_id="CAB58301.1" FT /translation="MNSNDLDERVAVVAGGSKGAGLATARLLREAGARVVSIARTAPAT FT ADVVFVPAGLSTPEGVKASSEAVAELVGVPDILVHVVGGSRSPAGGYAALDDERWAQEL FT SLNLLPAVRLDRAIVPGMVARGSGAIVHVTSIQRRMPLHDSTLAYAAAKSALTTYSKGL FT ANEVAPAGVRVNSVAPGFIRTDGAEALLARRMSESRITREAALGELMRVLGGIPLGRPA FT EPEEVAETIAFLVSDRASGITGSEHVVDGGTIRTV" FT misc_feature 131547..132077 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 85.20, E-value 1.4e-21" FT misc_feature 131928..132014 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature" FT misc_feature 132177..132269 FT /note="Pfam match to entry PF00678 adh_short_C2, Short FT chain dehydrogenase/reductase C-terminus, score 50.60, FT E-value 3.6e-11" FT RBS 132317..132320 FT CDS 132327..132647 FT /transl_table=11 FT /gene="SCO0139" FT /gene_synonym="SCJ33.03" FT /product="hypothetical protein SCJ33.03" FT /note="SCJ33.03, unknown, len: 106 aa." FT /db_xref="UniProtKB/TrEMBL:Q9RIX4" FT /protein_id="CAB58302.1" FT /translation="MQDIRAFVEEYVAAATGPDRERYLGLFRDDAAVHDDGRSLRGLAQ FT VRRWREETPNVDYDLLEVTGTPAACRAVAQISGDFPGSPVTLRFAFERDARGKITVLTI FT TP" FT RBS 132679..132684 FT CDS 132693..133520 FT /transl_table=11 FT /gene="SCO0140" FT /gene_synonym="SCJ33.04" FT /product="putative merR-family transcriptional regulator" FT /note="SCJ33.04, possible merR-family transcriptional FT regulator, len: 275 aa. Similar to several e.g. FT Streptomyces coelicolor TR:CAB56383 (EMBL; AL118515) FT putative merR family transcriptional regulator SCD17.06C FT (319 aa), fasta scores opt: 164 z-score: 194.6 E(): 0.0018 FT 28.9% identity in 298 aa overlap and Bacillus subtilis FT SW:BLTR_BACSU (EMBL; L32599) multidrug-efflux transporter FT 2 regulator (273 aa), fasta scores opt: 154 z-score: 184.2 FT E(): 0.0069 21.3% identity in 253 aa overlap. Contains a FT Pfam match to entry PF00376 merR, Bacterial regulatory FT proteins, merR family. Contains a possible helix-turn-helix FT motif located between residues 6..27 (+3.26 SD)." FT /db_xref="GOA:Q9RIX3" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q9RIX3" FT /protein_id="CAB58303.1" FT /translation="MADRLTIGEFSRITHLSIRMLRRYHEQDLLVPAEVDPDTGYRYYS FT PAQIRPALTVRRFRDLDLPLADLRRFLAAESADGPDDGTAQQVVAAHLRRLEDRLGRTQ FT RAVEVLRELLDPEAERAVTLEELPARRVLAVTLDVPEGAGLDWYDEAMCDVDSAAGERS FT VLPPGGRYEHTLFTEGHGRATVYVPFEAPLPPEMPGRVRELHLPRRTAAVATHQGRHDD FT LDLTYGAVGSFAARNDLRSQDLVEEVYLVGPRDTDRPELWRTLVAWLIAPENG" FT misc_feature 132714..132824 FT /note="Pfam match to entry PF00376 merR, Bacterial FT regulatory proteins, merR family, score 25.10, E-value FT 0.00069" FT CDS complement(133570..134121) FT /transl_table=11 FT /gene="SCO0141" FT /gene_synonym="SCJ33.05c" FT /product="putative calcium-binding protein" FT /note="SCJ33.05c, possible calcium-binding protein, len: FT 183 aa. Weakly similar to many Eukaryotic calcium-binding FT proteins e.g. Drosophila melanogaster (Fruit fly) TR:O16158 FT (EMBL:AF014952) calcium-binding protein (184 aa), fasta FT scores opt: 265 z-score: 323.1 E(): 1.2e-10 28.1% identity FT in 178 aa overlap. Contains a 4xPfam match to entry PF00036 FT efhand, EF hand." FT /db_xref="GOA:Q9RIX2" FT /db_xref="HSSP:1TNX" FT /db_xref="InterPro:IPR018249" FT /db_xref="UniProtKB/TrEMBL:Q9RIX2" FT /protein_id="CAB58304.1" FT /translation="MASEFQRTKLQDMFNAFDVNGDGCLEEEDFAALASRWGRLPRVRA FT DGELAARVEEVLLGWWQHLSQTVDTDNDGRIDMDDLLAMVDRLPTMQDAVAATADTVFD FT AVDENGDGRISRNEHQRLIDLWHGQGITTGDVFDRLDQDADGHLSRSEFAALWIQFWIS FT DDPDEPGNYVCGPVAGHSLR" FT misc_feature complement(133642..133728) FT /note="Pfam match to entry PF00036 efhand, EF hand, score FT 7.10, E-value 2.3" FT misc_feature complement(133744..133830) FT /note="Pfam match to entry PF00036 efhand, EF hand, score FT 2.60, E-value 8" FT misc_feature complement(133858..133926) FT /note="Pfam match to entry PF00036 efhand, EF hand, score FT 6.30, E-value 2.9" FT misc_feature complement(134011..134097) FT /note="Pfam match to entry PF00036 efhand, EF hand, score FT 21.90, E-value 0.015" FT CDS complement(134295..136100) FT /transl_table=11 FT /gene="SCO0142" FT /gene_synonym="SCJ33.06c" FT /product="conserved hypothetical protein SCJ33.06c" FT /note="SCJ33.06c, unknown, len: 601 aa. Similar to the FT C-terminus of Mycobacterium tuberculosis hypothetical FT proteins SW:YS74_MYCTU (EMBL; Z74024) (695 aa), fasta FT scores opt: 331 z-score: 375.0 E(): 1.6e-13 30.3% identity FT in 185 aa overlap and SW:YX05_MYCTU (EMBL; Z74024) (695 FT aa), fasta scores opt: 331 z-score: 375.0 E(): 1.6e-13 FT 30.3% identity in 185 aa overlap. Contains 5x Pfam match to FT entry PF01436 NHL, NHL repeat and possible membrane FT spanning hydrophobic domains" FT /db_xref="GOA:Q9RIX1" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q9RIX1" FT /protein_id="CAB58305.1" FT /translation="MVKHARVRAPELVGRGGWINTGDRELSLAALRGRIVVLDFWTFCC FT VNCLHALDELRELEERHRDTVVIVGVHSPKFTHEAEHRAVLDAVERYSVEHPVLDDPER FT VTWRQYAVRAWPTLAVIDPEGYVVAQYTGEGHAHAIQRLVEELEARHAAKGTLRRGDAP FT YVAPEPEPTTLRFPGKAVSLPSGTFLVSDTTRHQLVELAEDGESPVRRIGSGRRGFTDG FT PADRAEFSEPQGLALLGDGSVVVADTVNHALRRYEPVTGEVTTLAGTGRQHRPGEPSRG FT AARAVSLSSPWDVALWNDRVWIAMAGVHQLWAYDPRDGSVTVTAGTGNEGLVDGPGPEA FT WFAQPSGLSATDDRLWVADSETSALRWVELDGTVRTAVGTGLFDFGHRDGPAARALLQH FT PLGVAALPDGSVVVADTYNHALRRYAPPTGEVSTLATDLREPSDAVVVGGDVLVVESAR FT HRLTRLRLPHDALGTGSGEAVLRGTTEAAPGTLRLEVAFRALAGQKLDQRYGPATRLLV FT SATPPELLRAGEGAGTELSRSLDLDPSVPEGMLHVSATAASCDDDLDVPYPACHVHQKD FT WKIPVRLVEGASDRLPLVLTGVDTA" FT misc_feature complement(134709..134789) FT /note="Pfam match to entry PF01436 NHL, NHL repeat, score FT 5.30, E-value 11" FT misc_feature complement(134829..134912) FT /note="Pfam match to entry PF01436 NHL, NHL repeat, score FT 30.00, E-value 5.5e-05" FT misc_feature complement(134997..135077) FT /note="Pfam match to entry PF01436 NHL, NHL repeat, score FT 2.10, E-value 27" FT misc_feature complement(135159..135239) FT /note="Pfam match to entry PF01436 NHL, NHL repeat, score FT 4.40, E-value 14" FT misc_feature complement(135333..135416) FT /note="Pfam match to entry PF01436 NHL, NHL repeat, score FT 22.70, E-value 0.0084" FT RBS 136631..136636 FT CDS 136647..137183 FT /transl_table=11 FT /gene="SCO0143" FT /gene_synonym="SCJ33.07" FT /product="putative membrane protein" FT /note="SCJ33.07, possible membrane protein, len: 162 aa. FT Similar to the N-terminus of an E. coli SW:YJGJ_ECOLI FT (EMBL; U14003) hypothetical 21.5 KD protein in PYRL-ARGI FT intergenic region (197 aa), fasta scores opt: 199 z-score: FT 239.3 E(): 5.8e-06 41.3% identity in 75 aa overlap. FT Contains possible membrane spanning hydrophobic domains." FT /db_xref="GOA:Q9RIX0" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q9RIX0" FT /protein_id="CAB58306.1" FT /translation="MTDRSSSAWLAAMGRPRAFDEDEAVRAAVTLFGGRAYDGVSVDDL FT VSHLGVHRNSLYKTFGSKRGLYLTALRRHLADDVGPLLDALADAPDAAAALRLVTSADL FT GLLLLAITERAPVDDEVAAEVNAALAAVDRAVADALGVSADLATAVTAAALGIVLRGNP FT DNAATALAQRLSPRT" FT RBS 137185..137188 FT CDS 137197..137556 FT /transl_table=11 FT /gene="SCO0144" FT /gene_synonym="SCJ33.08" FT /product="hypothetical protein SCJ33.08" FT /note="SCJ33.08, unknown, len: 119 aa." FT /db_xref="UniProtKB/TrEMBL:Q9RIW9" FT /protein_id="CAB58307.1" FT /translation="MALIRIEGDDLVVVIEGLDKLWAFKGSLTIPLAHVRGATVDPGIA FT AEPKGVRAPGSHLPGVIIAGTFHQEGEKVFWDVKDRSKAVVIELSDEQYARLVLQVDDP FT RATVALIEGTLAGRR" FT RBS 137547..137554 FT CDS 137561..138589 FT /transl_table=11 FT /gene="SCO0145" FT /gene_synonym="SCJ33.09" FT /product="putative secreted protein" FT /note="SCJ33.09, possible secreted protein, len: 342 aa. FT Similar to Streptomyces coelicolor TR:CAB45466 (EMBL; FT AL079348) hypothetical 33.9 KD protein SC66T3.10C (318 aa), FT fasta scores opt: 272 z-score: 301.5 E(): 2e-09 34.0% FT identity in 300 aa overlap. Contains a TTA /leucine codon, FT possible target for bldA regulation. Contains a possible FT N-terminal signal sequence." FT /db_xref="UniProtKB/TrEMBL:Q9RIW8" FT /protein_id="CAB58308.1" FT /translation="MFRHLAAVATALAVVTVTPVEATPALVPAVDRDVAFTADGTTAYG FT TLHVPEHRAGQRLRAALLLPGSGPTDRDGNQPPASLPDTLAQLADTLGKDGVATLRFDK FT YGTGRTGLGTYQDRPEELDYPAFVRQARAGYESLRDQPETDPHALLVVGHSEGAMTGLL FT LGGTVSPRPAGLALLQPQAIRMLDLVALQLRAQIAEATRQGQFTPEQQRTVNAAVDAAV FT TALRERRPVDTADLPSPIARLFEAFQGPNARFVRSDDAVYPPDTAFALRPGTKVLLTCG FT THDVQVPCDTTNVLTTALRHAHAHGPGRVVLPGVDHLMHDTDHPATLTPPVLDSLHWLA FT QH" FT misc_feature 137801..137803 FT /note="TTA/leucine codon, possible target for bldA FT regulation" FT CDS complement(138618..138761) FT /pseudo FT /transl_table=11 FT /gene="SCO0146" FT /gene_synonym="SCJ33.10c" FT /product="transposase, pseudogene" FT /note="SCJ33.10c, transposase, pseudogene fragment, len: 48 FT aa. Gene fragment which is highly similar to Streptomyces FT coelicolor SW:YM3_STRCO (EMBL; X15942) mini-circle putative FT transposase for IS117 (414 aa)" FT RBS 138965..138970 FT CDS 138976..139467 FT /transl_table=11 FT /gene="SCO0147" FT /gene_synonym="SCJ33.11" FT /product="putative transmembrane transport protein" FT /note="SCJ33.11, possible transmembrane transport protein, FT len: 163 aa. Weakly similar to several including: Aquifex FT aeolicus TR:O66755 (EMBL; AE000690) MG(2+) transport ATPase FT (225 aa), fasta scores opt: 110 z-score: 142.5 E(): 1.4 FT 26.7% identity in 146 aa overlap and Bacillus subtilis FT TR:O31833 (EMBL; Z99114) YoaS protein (160 aa), fasta FT scores opt:109 z-score: 143.2 E(): 1.3 25.0% identity in FT 148 aa overlap. Contains a Prosite hit to PS00211 ABC FT transporters family signature and Contains possible FT membrane spanning hydrophobic domains." FT /db_xref="GOA:Q9RIW7" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q9RIW7" FT /protein_id="CAB58310.1" FT /translation="MGKITMVALRTVLVALLAGSLFVQTVMVALLAGDMEGGVLADRRV FT PILLIVVLGIGTAQTVLVCVWRLVSMVRRGSVFSDGAFRYVHIVIGAFTAAAVLVFALG FT VVLAPGEAVAPGVVLLLGGVSLAVFAVALIVLVLRMLLAQAVAREVEATRMQTELAGVI FT " FT misc_feature 139294..139338 FT /note="PS00211 ABC transporters family signature" FT CDS 139467..139712 FT /transl_table=11 FT /gene="SCO0148" FT /gene_synonym="SCJ33.12" FT /product="putative transcriptional regulatory protein" FT /note="SCJ33.12, possible transcriptional regulatory FT protein, len: 81 aa. Highly similar to Bacillus subtilis FT TR:O31834 (EMBL:Z99114) YozG protein (84 aa), fasta scores FT opt: 307 z-score: 443.1 E(): 2.6e-17 61.8% identity in 68 FT aa overlap. Contains a Pfam match to entry PF01381 HTH_3, FT Helix-turn-helix which lies between residues 17..38 (+3.45 FT SD)." FT /db_xref="GOA:Q9RIW6" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q9RIW6" FT /protein_id="CAB58311.1" FT /translation="MPIVVDIDVMLARRKMSVGELAERIGITPANLAVLKNGRAKAVRF FT TTLAALCEVLDCQPGDLLRWEAERLADEATPAERHL" FT misc_feature 139485..139652 FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 34.50, E-value 2.4e-06" FT CDS complement(139703..140299) FT /transl_table=11 FT /gene="SCO0149" FT /gene_synonym="SCJ33.13c" FT /product="hypothetical protein SCJ33.13c" FT /note="SCJ33.13c, unknown, len: 198 aa." FT /db_xref="UniProtKB/TrEMBL:Q9RIW5" FT /protein_id="CAB58312.1" FT /translation="MEGRWFLGSGQLEDLLGSDQQVVVAVKAEVAGDAGAGSVGTDDEP FT RPDSRRPVATEQVERVAPASGVARAQDDAHAGGRSGGRRRGVERRHVSYAVLVAAADQG FT DGAAQVGRVEDDPSNRWAEVLGRQREVVECLPHEDPRGADRADKTGSPVDQEDAVALPC FT EERGGVEAGQSGADDEDIRTGRGPEEVGAGRSAHR" FT CDS 140368..140862 FT /transl_table=11 FT /gene="SCO0150" FT /gene_synonym="SCJ33.14" FT /product="hypothetical protein SCJ33.14" FT /note="SCJ33.14, unknown, len: 164 aa" FT /db_xref="UniProtKB/TrEMBL:Q9RIW4" FT /protein_id="CAB58313.1" FT /translation="MGVAGYAERFPGGLRQALQRFSASAPGLAGVDRPEAVERRGGPIP FT VGGVLRRIGCADGILVGDAAGAVSPLTAGGLDPCLRLSEFAAEVLDHALRTRRPDALSA FT YDGAALRAAFRGRLTLRRALAQVRTPTVAQAAFTLLRTPIGRAAAGRVLFGDKSFPTPA FT R" FT RBS 141360..141363 FT CDS 141370..141708 FT /transl_table=11 FT /gene="SCO0151" FT /gene_synonym="SCJ33.15" FT /product="putative integral membrane protein" FT /note="SCJ33.15, possible integral membrane protein, len: FT 112 aa. Contains Contains possible membrane spanning FT hydrophobic domains." FT /db_xref="UniProtKB/TrEMBL:Q9RIW3" FT /protein_id="CAB58314.1" FT /translation="MSLGPQPWYEPPKRDDPAAGERPPPEPGQDVGSEAARLAVGLRLG FT LRIAAVWLLYALSAALVPAAYGTRVAGPVSLGVILAAVPLAVGVHALVVYGRRLDRLGS FT GPDARRWS" FT RBS 141695..141701 FT CDS 141705..143315 FT /transl_table=11 FT /gene="SCO0152" FT /gene_synonym="SCJ1.01" FT /gene_synonym="SCJ33.16" FT /product="putative transmembrane transport protein" FT /note="SCJ1.01, possible transmembrane transport protein, FT partial CDS, len: >284 aa; similar to S. coelicolor FT putative transmembrane transport protein SC5B8.17 TR:O70003 FT (EMBL: AL022374) (530 aa), fasta scores; opt: 513 z-score: FT 549.9 E(): 2.9e-23 38.1% identity in 270 aa overlap, FT Rhodobacter capsulatus transmembrane protein FT TR:O68042(EMBL: AF010496)(578 aa), fasta scores opt: 243 FT z-score: 263.6 E(): 2.5e-07 26.3% identity in 281 aa FT overlap and Pseudomonas putida TR:O50471 (EMBL; Z71176) FT phenylacetic acid permease (520 aa), fasta scores opt: 233 FT z-score: 253.6 E(): 9.1e-07 31.1% identity in 293 aa FT overlap. Contains probable membrane spanning hydrophobic FT domains." FT /note="SCJ33.16, possible transmembrane transport protein, FT partial CDS, len: >288 aa. Similar to several including: FT Pseudomonas putida TR:O50471 (EMBL; Z71176) phenylacetic FT acid permease (520 aa), fasta scores opt: 337 z-score: FT 380.9 E(): 7.5e-14 29.4% identity in 269 aa overlap and FT Streptomyces coelicolor TR:O70003 (EMBL; AL022374) putative FT transmembrane transport SC5B8.17 (530 aa), fasta scores FT opt: 462 z-score: 520.1 E(): 1.3e-21 31.9% identity in 279 FT aa overlap. Overlaps with and extends into CDS SCJ1.01. FT Contains possible membrane spanning hydrophobic domains." FT /db_xref="GOA:Q8CK67" FT /db_xref="InterPro:IPR001734" FT /db_xref="UniProtKB/TrEMBL:Q8CK67" FT /protein_id="CAD55426.1" FT /translation="MTTLLDPSSRSLVLAVFSVFVVICLMLCIVTGADDDDRALVRSGS FT RRLRSWQQGIAMGGDTTTVATVTVLVGMVATSGFDGLGVMLGSLMGVMLLLVLIVEPLR FT RHASLTVADLLDARGSGGPTVRASWGVVTLLVCFPLLVVQLVVVGNVAAALIGQPGART FT GCIVVIGCVMTALAVIGGIRGTGVVMIAKSAVTLPVLVVAAVLVLHRFGGDPGRLLDAA FT AHGSGLGGAYLRPGGYTGEGWVGAVNRIGQIFGMSMATLAMPAVLMRAISTKSPRGART FT VGRWMLGELTLLYAALAVVGIGAAALVGGALREAGPSAQVFTPLLLGRALDSGGVLVAA FT LACVLFLTALAAVVDVTLAAGIALGRDVLDASGRRASGAPGDSHASGGHAAGGVDGAAS FT RWSAALTGSAAALVAVFTADWNLVVVSTLWLAVCGAALAPVLLYALYWPGFTARGALWC FT LWGATVVSVAALAVSPYVSGAPAAIFPDYDFNVWDVKFPGLVTVPAGFLLGWLGSVTDP FT RRGTRRLSAPERHRELDAA" FT CDS complement(143776..144363) FT /transl_table=11 FT /gene="SCO0153" FT /gene_synonym="SCJ1.02c" FT /product="putative secreted protein" FT /note="SCJ1.02c, probable secreted protein, len: 195 aa, FT similar to Actinosynnema pretiosum auranticum hypothetical FT 20.0 KD protein TR:O69206 (EMBL:U33059) (190 aa), fasta FT scores, opt: 524 z-score: 529.6 E(): 3.9e-22; 43.2% FT identity in 192 aa overlap. Contains a possible N-terminal FT signal peptide sequence" FT /db_xref="InterPro:IPR019545" FT /db_xref="UniProtKB/TrEMBL:Q9RJ12" FT /protein_id="CAB53120.1" FT /translation="MRRGRKAAGRPLLIGALALAVVGGTLGLYWFQPWKLWQDETVDEA FT LPGAVTTASPPGAVTTSPPPAAAPAPSPTRDAGPRTVAGGELVSHEHSTSGTAQLVRLT FT DGSHVVRLENLDTSNGPDVHVWLTDAPVKEGKAGWHLFDDGEYVDLGKLKGNKGSQNYD FT VPADVDPSRYTSVSVWCDRFNVSFGAAELARA" FT RBS complement(144374..144379) FT CDS complement(144704..145366) FT /transl_table=11 FT /gene="SCO0154" FT /gene_synonym="SCJ1.03c" FT /product="hypothetical protein SCJ1.03c" FT /note="SCJ1.03c, unknown,len:220 aa, similarity to FT Synechocystis sp. (strain PCC 6803) hypothetical 24.8 KD FT protein TR:P73776 (EMBL: D90909)(218 aa), fasta scores opt: FT 291 z-score: 344.1 E(): 8.3e-12 31.2% identity in 170 aa FT overlap and a weakly similar to Pseudomonas fluorescens FT SW:TIPB_PSEFL (EMBL; U44827) thiol:disulfide interchange FT protein TipB precursor (cytochrome C biogenesis protein FT TipB) (178 aa), fasta scores opt: 148 z-score: 181.8 E(): FT 0.0091 28.7% identity in 122 aa overlap." FT /db_xref="GOA:Q9RJ11" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q9RJ11" FT /protein_id="CAB53121.1" FT /translation="MTTTPIADQAAVLAEGMADQTPSEALEAFGAEQAELDAAGVPSGI FT ATAGSLMPDASLLDVHGNATTLQQVREGRPAVVVFYRGAWCPYCNLALRTYERELAPRL FT AERGVSMIAVSPQRPDGSLTMAQTNDLSYDVLSDPGNHIGRALGIVTRPTDRVQHAQAS FT LGLDLTEVNADGTPDILMPTVAIVDAEGVLRWIDVHPNYVTRSEPARILEALARAVR" FT RBS complement(145374..145377) FT CDS 145499..146122 FT /transl_table=11 FT /gene="SCO0155" FT /gene_synonym="SCJ1.04" FT /product="putative transcriptional regulatory protein" FT /note="SCJ1.04, possible tetR family transcriptional FT regulatory protein, len: 204 aa, similarity to several FT E.coli proteins including uid operon repressor (gus operon FT repressor) SW:UIDR_ECOLI (EMBL:M14641)( 196 aa), fasta FT scores opt: 170 z-score: 212.8 E(): 0.00017 25.5%identity FT in 184 aa overlap and the hypothetical transcriptional FT regulator SW:YDHM_ECOLI (EMBL: AE000260)(199 aa), fasta FT scores opt: 176 z-score: 219.8 E(): 7e-05 27.6% identity in FT 185 aa overlap. In addition to Lactococcus lactis (subsp. FT lactis) hypothetical protein SW:YPB3_LACLA (EMBL: X60456) FT (196 aa), fasta scores opt: 245 z-score: 301.6 E(): 1.9e-09 FT 31.9% identity in 188 aa overlap. Contains a Pfam match to FT entry PF00440 tetR, Bacterial regulatory proteins, tetR FT family," FT /db_xref="GOA:Q9RJ10" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q9RJ10" FT /protein_id="CAB53122.1" FT /translation="MTSSTGTRRLTAKGRATRDRIVAAAAQLMYERGVTGTSTEDILKA FT ARVASPSQLYHYFGDKRGLVQAVIEHQTEQVLGFQKPLLSRLDSIEALEAWRDAVVEAQ FT HARDCQGGCPLGSLASELSDLDPQARARLVAGYEQWGNAIREGLRSMRERGELDGGADP FT DRLALALLTALQGGLLMTQTRRDTIALEAVLNTMIDHIRFRTTP" FT misc_feature 145559..145702 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 28.80, E-value FT 3e-06" FT CDS complement(146034..146351) FT /transl_table=11 FT /gene="SCO0156" FT /gene_synonym="SCJ1.05c" FT /product="hypothetical protein SCJ1.05c" FT /note="SCJ1.05c, doubtful CDS, len: 125 aa" FT /db_xref="UniProtKB/TrEMBL:Q9RJ09" FT /protein_id="CAB53123.1" FT /translation="MPDVVLDALAPYVDVLSVQTFPSPGARSAERALDVIGRWHERTGL FT PVLVADTGNWCPTVMNPGRTGSARDQRERGAARASYGSGCGRSSCSGRPPGRWCRVGSA FT S" FT CDS 146603..146980 FT /transl_table=11 FT /gene="SCO0157" FT /gene_synonym="SCJ1.06" FT /product="hypothetical protein SCJ1.06" FT /note="SCJ1.06, doubtful CDS, len: 125 aa" FT /db_xref="UniProtKB/TrEMBL:Q9RJ08" FT /protein_id="CAB53124.1" FT /translation="MTSTPDLSKTQSSPGLPSKEVPTSAAPYSHLLLRFAEDGPCRRTG FT IRPHPRLTKCTVTRLRSTPAGTNQSALDRPQPSPAPKGALPLRAANLVRICDPRHTQFL FT SGIGALFRSSHREQRTDRSDT" FT RBS 146966..146970 FT CDS 146977..148206 FT /transl_table=11 FT /gene="SCO0158" FT /gene_synonym="SCJ1.07" FT /product="putative oxidoreductase" FT /note="SCJ1.07, probable oxidoreductase, len: 409 aa; FT similar to e.g. Synechocystis sp. (strain PCC 6803) FT TR:P73735 (EMBL:D90909) NADH dehydrogenase (404 aa), fasta FT scores opt: 358 z-score: 399.1 E(): 7.1e-15 28.9% identity FT in 353 aa overlap and Rhodococcus globerulus FT TR:Q57031(EMBL:X80041) ferredoxin reductase BPH (412 aa), FT fasta scores opt:294 z-score: 328.8 E(): 5.9e-11 31.3% FT identity in 358 aa overlap" FT /db_xref="GOA:Q9RJ07" FT /db_xref="InterPro:IPR013027" FT /db_xref="UniProtKB/TrEMBL:Q9RJ07" FT /protein_id="CAB53125.1" FT /translation="MKHRIVVLGAGYAGAYVAGTLARRLSRQDTEITVVNAEPDFVQRL FT RLHQLSAGQAIEAPQLTEVFAGTGIRLRLARVTAVDPERQVVAVADADGGDGHGELGYD FT TLLYALGSHVTTHGVPGVAEHAFDVAGRPSALRLRKRLDVLSRRDEGGSVLIVGVGLTG FT IETATEIAESRPGLSVTLIARGELGAQLSAGARRHLRQACDRLGITVLEHTEVEAVEAA FT RVLCADGTALASDATVWTAGFAVSPIAAAGGLEVTETGRIVVDRTMQSVSHPNVYAAGD FT SAYVVGDNGRPLPMSCASAGYTGMQATAAIVGRLTGRTIPNTKLEYLGNHISLGRRDAI FT LQMVDDEAQAKQNYVGGRKAARIKAGILKMSLWTTSHPTFGLPRRRHHLAPVPNGSADK FT AIAHSEKTAA" FT CDS 148216..149184 FT /transl_table=11 FT /gene="SCO0159" FT /gene_synonym="SCJ1.08" FT /product="putative ECF sigma factor" FT /note="SCJ1.08 putative ECF sigma factor, len: 322 aa, FT similar to many e.g. S. coelicolor TR:CAB44418 FT (EMBL:AL078610) putative ECF sigma factor SCH35.09 (223 aa) FT fasta scores, opt: 656 z-score: 777.0 E(): 0 64.6% identity FT in 175 aa overlap and Mycobacterium tuberculosis SIGI FT protein TR:O50445 (EMBL; AL010186)(290 aa), fasta scores FT opt: 385 z-score: 458.0 E(): 3.7e-18 30.0% identity in 290 FT aa overlap. Contains a Pfam match to entry PF00776 FT Sigma70_ECF, Sigma-70 factor (ECF subfamily). Possible FT helix-turn-helix motif between 142-163 aa, score +4.11 SD" FT /db_xref="GOA:Q9RJ06" FT /db_xref="InterPro:IPR013249" FT /db_xref="UniProtKB/TrEMBL:Q9RJ06" FT /protein_id="CAB53126.1" FT /translation="MIRVDSTATDRFDTSRFEASRNRLASLAYRLLGSATDAEDAVQDA FT FLHWQSADRQQIKVPEAWLTKVVTNLCLDRLRSAQARRERAAGVWLPEPLLAGDPMLGP FT ADTFEQRESVSLAMLTLMERLSPLERAVYLLREAFSYSHTEIAEILDVTESASQQHLHR FT ARHRITATRRRGAEVDPASARAIVEEFLAAATSGRMERLVALLTDDAIAIADSNGAGLA FT KTLLRYDTPERVAAVARTGFKPTPAKRRLAGGPPAIHYALVNRTPALLFLLGDQVTGTV FT TFDVTDGKIATVRGIAAPARLVRLTGTWRRHGPNFPLIAQW" FT misc_feature 148291..148488 FT /note="Pfam match to entry PF00776 Sigma70_ECF, Sigma-70 FT factor (ECF subfamily), score 27.40, E-value 6.5e-05" FT CDS complement(149508..150209) FT /transl_table=11 FT /gene="SCO0160" FT /gene_synonym="SCJ1.09c" FT /product="possible DNA-binding protein" FT /note="SCJ1.09c, possible DNA-binding protein, len: 195 aa, FT similarity to Mycobacterium tuberculosis TR:O53625 (EMBL; FT AL021428) hypothetical 16.6 KD protein (152 aa), fasta FT scores opt: 182 z-score: 220.8 E(): 6.1e-05 34.2% identity FT in 155 aa overlap and Mycobacterium tuberculosis TR:O05803 FT (EMBL; Z95150) hypothetical 12.3 KD protein (110 aa), fasta FT scores opt: 142 z-score: 177.2 E(): 0.016 34.8% identity in FT 89 aa overlap. Contains a Pfam match to entry PF01381 FT HTH_3, Helix-turn-helix and a possible helix-turn-helix FT motif at residues 34..55 (+3.91 SD)" FT /db_xref="GOA:Q9RJ05" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q9RJ05" FT /protein_id="CAB53127.1" FT /translation="MHAEPERSDDGAQPSSEAGRMADRMAVRRRQLGMSRDELARRAGM FT STTYLREVESRARDFDPGALARLAVVLEMPYEELTAGRTDAPPGRGGPAAHPVLVRLSE FT QECWQRLGTHGIGRISYVAGPGKEAPVVVPVNFLVDGRSVVYRTDPAGVAGIRAGEPVA FT FEADHVDEMTGLGWSVLLAGTAEHPVEREALEALARRRGAVPWAGGRRDLWVRVLPHQV FT SGRVIQPLREA" FT misc_feature complement(149973..150137) FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 36.00, E-value 8.3e-07" FT CDS complement(150181..150525) FT /transl_table=11 FT /gene="SCO0161" FT /gene_synonym="SCJ1.10c" FT /product="hypothetical protein SCJ1.10c" FT /note="SCJ1.10c, doubtful CDS, len:124 aa." FT /db_xref="UniProtKB/TrEMBL:Q9RJ04" FT /protein_id="CAB53128.1" FT /translation="MLRRSSVASVLYARRSGDPVTVLSARDFIRHLHCSSSVRSAGRAG FT QAAHRYRLAQPCGTFGAHEPRAGYECGPTACGGLRSGSLRWRTDGASAPLEEGARNGVD FT SRARRARTVR" FT RBS complement(150219..150225) FT RBS complement(150530..150535) FT RBS 150568..150573 FT CDS 150579..151571 FT /transl_table=11 FT /gene="SCO0162" FT /gene_synonym="SCJ1.11" FT /product="conserved hypothetical protein SCJ1.11" FT /note="SCJ1.11, unknown, similar to several including: FT Mycobacterium tuberculosis TR:O53476(EMBL; AL021899) FT hypothetical 36.6 KD protein (331 aa), fasta scores opt: FT 394 z-score: 468.4 E(): 1e-18 32.2% identity in 332 aa FT overlap and Mycobacterium tuberculosis TR:O05800 (EMBL; FT Z95150) hypothetical 38.5 KD protein (344 aa), fasta scores FT opt: 345 z-score: 410.5 E(): 1.7e-15 30.2% identity in 324 FT aa overlap." FT /db_xref="UniProtKB/TrEMBL:Q9RJ03" FT /protein_id="CAB53129.1" FT /translation="MAQLRLDQRTVTTLVAEATTAPSMHNAQPWRFRFLAAERLVLLRA FT DPARAMPRSDPGNRALHIGCGAALFNLRVAAVHASLVPRIRLLPDPRDPLLLASVQLAD FT LSEAPQEKDLWRLHPAIRQRRTSRHPFSERDIPENVRATLQAAAAREGATLLFPGLWHV FT DTLLELVRDAESRDLVRAEEDEDLVRWTRLGGEVDTAVDGVPAYAFGPRKSDGKAPVRD FT FSGRRPVPDRGSAAFERTPHLALLGTRGDGPRDWLAAGQALERVLLEGTLRGLSTSLTS FT HPLEDRELRLLTRDPGSGVGHVQMVLRLGYGPKGPATPRRPVPDVLSVV" FT RBS 151738..151742 FT CDS 151749..153275 FT /transl_table=11 FT /gene="SCO0163" FT /gene_synonym="SCJ1.12" FT /product="conserved hypothetical protein SCJ1.12" FT /note="SCJ1.12 unkown, len: 508 aa, similar to FT Mycobacterium tuberculosis SW:YW13_MYCTU (EMBL; Z74025) FT hypothetical 54.4 KD protein CY39.13 (498 aa),fasta scores FT opt: 1192 z-score: 1332.4 E(): 0 43.8% identity in 470 aa FT overlap and Aquifex aeolicus TR:O66641 (EMBL: AE000682) FT hypothetical 38.3 KD protein (322 aa), fasta scores opt: FT 550 z-score: 618.7 E(): 4.2e-27 35.5% identity in 279 aa FT overlap. Contains a PS00017 ATP/GTP-binding site motif A FT (P-loop)." FT /db_xref="UniProtKB/TrEMBL:Q9RJ02" FT /protein_id="CAB53130.1" FT /translation="MAEPGGHEGPASTQRAKVCETHTAMVFFVEDRVYKRKKPVDLGFL FT DYTTRSSRRAVCEREIELNRRFAPDVYLGLGELRTPGEQEAEPLVVMRRMPDDRRLSHL FT VRTGAPVADDLRAVARHLAAWHSAAPRGPAIAEQGTRDALAARWEASFTQVDVLAAKGP FT TRDEAGEVERLVRRYLAGRKPLFGLRIEQGRVLDGHGDLLADDVFCLGDGPRILDCLEF FT DDALRYVDGLDDAAFLAMDLESLGAPESAAFFLAQYGEYSGDPAPPSLWHHYVAYRAFV FT RAKVSLIQARQGAPGAHATARRLVRMALRHLRASAVGLTLVAGLPGTGKSTLSGALADR FT LGAVLLSSDRLRKEMAGLSPQQTASADYGEGLYTPEWTARTYAELLDRAAALLALGESV FT VLDATWIDSAQREAARHTAESAGADLVALHCHVPDDVTAARLSTRAPGASDADLGVAEA FT MAAEEQPWSGAVGVDTGGSLEAAVGQALAAVRPWGSDQAKVFRRPYMEPD" FT misc_feature 152718..152741 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS 153389..153393 FT CDS 153398..155728 FT /transl_table=11 FT /gene="SCO0164" FT /gene_synonym="SCJ1.13" FT /product="putative cation-transporting ATPase" FT /note="SCJ1.13, putative cation-transporting ATPase, len: FT 776 aa, similar to many including: Mycobacterium FT tuberculosis SW:CTPG_MYCTU (EMBL:Z74025) probable FT cation-transporting ATPase G (771 aa), fasta scores opt: FT 1050 z-score: 1095.0 E(): 0 37.6% identity in 588 aa FT overlap, Mycobacterium tuberculosis TR:O66027 FT (EMBL:U82820)(EMBL metal-transporting ATPase MTA72 (680 FT aa), fasta scores opt: 1036 z-score: 1081.2 E(): 0 33.8% FT identity in 577 aa overlap and Helicobacter felis FT SW:COPA_HELFE (EMBL: AJ001932) copper-transporting ATPase FT (EC 3.6.1.36) (732 aa), fasta scores opt: 904 z-score: FT 943.3 E(): 0, 33.1% identity in 547 aa overlap.Contains FT possible membrane spanning hydrophobic domains, a Pfam FT match to entry PF00122 E1-E2_ATPase, E1-E2 ATPases and a FT PS00154 E1-E2 ATPases phosphorylation site." FT /db_xref="GOA:Q9RJ01" FT /db_xref="InterPro:IPR008250" FT /db_xref="UniProtKB/TrEMBL:Q9RJ01" FT /protein_id="CAB53131.1" FT /translation="MDRFLLVARLRRSTAVLASPLLERGLLAVTTAALTGGGVAHFLDA FT DGIAELFWGLGTVAAVIPAVGWVLVALRRGHAGVDLIAVLALGGTLAVGEYLAGVLIAL FT MLATGRTLEGAAQRRASHDLHALLAHAPRSARRRTGDGVVRVPLSEITAGDALVVGPGE FT VVPVDGRVESTEAVLDESVLTGEPLQVTRQRGEGARSGAVNAGGAFDLRATAIEQDSTY FT AGIVRLAQQAGAESAPVVRLADRYAAWFLPLALATAALAWLVSGSAVRAVAVLVVATPC FT PLLLAAPVAVVSGLSRASRRGVVVRDGGALENLGRARTLLLDKTGTLTVGRPCVLDVVA FT APGHVPAEVLRVAASLDQLSPHVLAQAIVDAARTRRLELSAPTEVTEEPGRGASGVVEG FT HRVFIGRDDPTRARPNWAKAVGNRALLDGASVAWLTVDERLTGAVLLRDALRRDAPHAV FT RRLRSAGIERLVMLTGDRAATAQEVAAVLGLDGVRAELGPADKVAAVRGEREHAVTVMV FT GDGVNDAPALAAADIGVAMGARGTTASSEAADIVLTTDRVDRLADAVVIAQRSRRIAVQ FT SALGGMLLSLGAMAAAALGLIQPAAGALLQEGIDVAVILNALRALRADHAGQGVLAPAT FT EALIHRFAAEHEDLQDVLQAVRDAADRLSGVPGPTALASVEEAHRLLTERLLPHEYAEE FT HQLYPALAPALGGPESTVTMSRAHTEIGRLSRRIATHLQLARTNGGLAPEQLDDLRSCL FT YGLNTVLRLHFTQEEESYFSLAP" FT misc_feature 153698..155089 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPases, score 294.10, E-value 1.7e-84" FT misc_feature 154364..154384 FT /note="PS00154 E1-E2 ATPases phosphorylation site" FT CDS complement(155707..156120) FT /transl_table=11 FT /gene="SCO0165" FT /gene_synonym="SCJ1.14c" FT /product="hypothetical protein SCJ1.14c" FT /note="SCJ1.14c, unknown, len:137 aa, shares a low level of FT similarity with Aquifex aeolicus TR:O66857 (EMBL:AE000697) FT hypothetical 14.5 KD protein (130 aa), fasta scores opt:144 FT z-score: 190.2 E(): 0.003127.2% identity in 103 aa overlap. FT Contains a PS00216 Sugar transport proteins signature 1." FT /db_xref="InterPro:IPR005180" FT /db_xref="UniProtKB/TrEMBL:Q9RJ00" FT /protein_id="CAB53132.1" FT /translation="MRYGRTITLDGPFEHVQRDVRQALADQGFGVLTEIDVQATLKAKL FT DQDIEPYLILGACNPPLAHRALGVDRSVGLLLPCNVVVRGDGDRVIVEVIDPDTMVTLT FT GLDAMAPVAEEAGRRLDAALGSLVGPRHGAREK" FT misc_feature complement(155743..155796) FT /note="PS00216 Sugar transport proteins signature 1" FT RBS 156328..156333 FT CDS 156338..157141 FT /transl_table=11 FT /gene="SCO0166" FT /gene_synonym="SCJ1.15" FT /product="putative regulator" FT /note="SCJ1.15, possible regulator, len: 267 aa, highly FT similar to Pseudomonas aeruginosa substrain OT684 TR:P72119 FT (EMBL:U12891) pyoverdine gene transcriptional regulator FT PvdS (237 aa), fasta scores opt: 1040 z-score: 1209.8 E(): FT 0 60.4% identity in 235 aa overlap and Mycobacterium FT tuberculosis TR:O05877 (EMBL; Z95121) hypothetical 34.1 KD FT protein MTCY20B11.07C (295 aa) fasta scores opt: 1189 FT z-score: 1380.2 E(): 0 65.6% identity in 262 aa overlap." FT /db_xref="InterPro:IPR005660" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ9" FT /protein_id="CAB53133.1" FT /translation="MAGTELRKISGKVYEKELRRLQIELVNLQEWVLTEKKRVAVVFEG FT RDAAGKGGTIKRLTEHLNPRVTRIVALPRPTERERTQWYFQRYVEQLPAGGEIVLFDRS FT WYNRAGVEHVMGFCTDDEYRRFLRHCPVFERMLVEDGLLLRKYWFSVSDVEQQERFRRR FT LQDPLKRWKLSTMDLESITRWEAYSRAKDEMMAATDTPESPWYVVESDDKRRARLNMIA FT HLLDSLPHHRVPPPSLRLPERPPPTGYTRSPRDRQTYVPDHAARL" FT CDS complement(157189..158073) FT /transl_table=11 FT /gene="SCO0167" FT /gene_synonym="SCJ1.16c" FT /product="conserved hypothetical protein SCJ1.16c" FT /note="SCJ1.16c, unknown, len: 294 aa, similar to many FT including: Mycobacterium tuberculosis TR:O06189 (EMBL; FT Z95387)hypothetical 31.7 KD protein MTCY1A10.09C (297 aa), FT fasta scores opt: 407 z-score: 484.5 E(): 1.3e-19 32.7% FT identity in 303 aa overlap and Mycobacterium tuberculosis FT SW:YW12_MYCTU (EMBL; Z74025) hypothetical 30.9 KD protein FT MTCY39.12 (295 aa), fasta scores opt: 401 z-score: 477.5 FT E(): 3.1e-19 34.7% identity in 294 aa overlap. Also similar FT to S. coelicolor SCJ1.29c (283 aa), fasta scores opt: 806 FT z-score: 761.9 E(): 0 46.4% identity in 295 aa overlap. FT Contains a Pfam match to entry PF00582 Usp, Universal FT stress protein family." FT /db_xref="GOA:Q9RIZ8" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ8" FT /protein_id="CAB53134.1" FT /translation="MGMMALPLVVGVDGSDGSLLAIDWAVDEAQRQGLPLRLVYASLWE FT RYEGALPAMGRERPSEQVMAENIVGTAAERVRRYDPGLTVDTDTVPAEAVSALLAEGRH FT ATAVVTGSRGRGELKGALLGSVSLAVASRADCPVVVVRGEKSALSGSHERVLLGAGDPD FT TSGAAVRFAFREADVRGCELDVVRAWRCPAYENADEGAPSDDSEDQPERRASALIDTLV FT AEAAAEHPSVRLRKTTIEGPARKVLVHRTAAADLVVVGARHRSGHFGLQLGRVTHTLLQ FT HAACPVAVVPQAT" FT misc_feature complement(157204..157524) FT /note="Pfam match to entry PF00582 Usp, Universal stress FT protein family, score 26.40, E-value 0.00012" FT CDS 158732..159304 FT /transl_table=11 FT /gene="SCO0168" FT /gene_synonym="SCJ1.17" FT /product="possible regulator protein" FT /note="SCJ1.17, possible regulator, len: 190 aa, similar to FT Mycobacterium tuberculosis TR:O69644 (EMBL; AL022121) FT putative transcriptional regulator MTV025.024 (224 aa), FT fasta scores opt: 199 z-score: 254.8 E(): 7.8e-07 31.5% FT identity in 124 aa overlap. Contains a Pfam match to entry FT PF00027 cNMP_binding, Cyclic nucleotide-binding domain." FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ7" FT /protein_id="CAB53135.1" FT /translation="MVPAAHKRQADTGEEQSHLAAARATAPDGPREVEGKETMTSTTTL FT PIAMPAQHRERLLRLAREVSFPPGARLFEEDRPADRFWIVRTGTVVLDIRVPDGRNAAV FT ESLGHGELLGWSWHFPPYRWHQGAEALSPVRAWEFDAKTVLTTCAEHPEFGRAIASWVG FT QVVADRLQKTRIRLLDLYAPHGSGILP" FT misc_feature 158909..159190 FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 27.50, E-value 0.0003" FT repeat_region 159366..159977 FT /note="This repeat unit encodes SCJ1.18 and is 67% FT identical to the repeated region complement(17965..18576)." FT misc_feature 159372..159527 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 18.40, E-value 0.17" FT CDS 159372..160025 FT /transl_table=11 FT /gene="SCO0169" FT /gene_synonym="SCJ1.18" FT /product="conserved hypothetical protein SCJ1.18" FT /note="SCJ1.18, conserved hypothetical protein, len: 217 FT aa. Duplication of DNA region complement(17965..18576). FT Similar to many hypothetical proteins including: Thermotoga FT maritima TR:AAD36216 (EMBL; AE001771) conserved FT hypothetical protein (215 aa), fasta scores opt: 239 FT z-score: 287.3 E(): 1.2e-08 29.1% identity in 175 aa FT overlap and S. coelicolor SCJ1.19c (223 aa), fasta scores FT opt: 711 z-score: 702.0 E(): 7.1e-34 56.7% identity in 215 FT aa overlap.Contains 2xPfam match to entry PF00571 CBS, CBS FT domains." FT /db_xref="InterPro:IPR014004" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ6" FT /protein_id="CAB53136.1" FT /translation="MTHTAVAVGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEA FT DLLPKEEFRDSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAARIMAQ FT RKVKRLPVVNAEGLLEGVVSRADLLKVFLRTDDAIAEEVGQEVVTPLFPSPAETVRVEV FT SDGLVTLGGRVRDTSLVPVAARLARAVEGVVDVRWDPTDVKTSGEGDQALRSNA" FT misc_feature 159609..159770 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 53.50, E-value 4.8e-12" FT CDS complement(160356..161027) FT /transl_table=11 FT /gene="SCO0170" FT /gene_synonym="SCJ1.19c" FT /product="conserved hypothetical protein SCJ1.19c" FT /note="SCJ1.19c, conserved hypothetical protein, len: 223 FT aa. Duplication of DNA region 16907..17518. Similar to many FT hypothetical proteins including: Thermotoga maritima FT TR:AAD36216 (EMBL; AE001771) conserved hypothetical protein FT (215 aa), fasta scores opt: 204 z-score: 245.5 E(): FT 2.6e-06 29.3% identity in 133 aa overlap and S. coelicolor FT SCJ1.18 (217 aa), fasta scores opt: 711 z-score: 712.7 E(): FT 1.8e-34 56.7% identity in 215 aa overlap. Contains 2x Pfam FT match to entry PF00571 CBS, CBS domains" FT /db_xref="InterPro:IPR007055" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ5" FT /protein_id="CAB53137.1" FT /translation="MTRRVIALAGGATFKDIVRTMETQLISALPVIDSGSHVIGVVSEA FT DVLRKEEFRDSDQLRGPRSRPPGALVKARAVTAEDLMTAPAVTVHPKAPVARAARLMAR FT RRVKRLPVVDDEGVLQGIVSRADLLRVFLRSDPDIAEEVRREIVGGRFPEGLGSVRVEV FT HEGVVTLTGRVPDTSLVPLAERLVRSVEGVVDVRCVLTGPRHRMTGESEKAGAAAHRPG FT P" FT repeat_region complement(160424..161035) FT /note="This repeat unit encodes SCJ1.19c and is 67% FT identical to the repeated region 16907..17518." FT misc_feature complement(160629..160790) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 54.10, E-value 3.1e-12" FT misc_feature complement(160872..161027) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 25.80, E-value 0.001" FT CDS 161237..162553 FT /transl_table=11 FT /gene="SCO0171" FT /gene_synonym="SCJ1.20" FT /product="conserved hypothetical protein SCJ1.20" FT /note="SCJ1.20, conserved hypothetical protein, len: 438 FT aa. Similar to many including: Aquifex aeolicus TR:O67155 FT (EMBL; AE000720) hypothetical 48.6 KD protein (426 aa), FT fasta scores opt: 1099 z-score: 1189.0 E(): 0 46.1% FT identity in 408 aa overlap and Mycobacterium tuberculosis FT SW:Y03F_MYCTU (EMBL; Z73902) hypothetical 54.3 KD protein FT MTCY130.15C (509 aa), fasta scores opt: 825 z-score: 892.7 FT E(): 0 41.2% identity in 430 aa overlap." FT /db_xref="GOA:Q9RIZ4" FT /db_xref="InterPro:IPR015977" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ4" FT /protein_id="CAB53138.1" FT /translation="MSDVTTTDLYEVTMALSYLLEDMSRPATFSLFVRDLPSERGFLVS FT AGIEPALDYLSAFRVTPSDVEDFASALHRPYADLSPLCGMTFTGEVRAVPEGRVVFAGE FT PLLEVTAPLAEAQLVETFLLNQVSHQTAVASKAVRSVLAAAGRPVVDFSLRRTHGTSAG FT MQAARTAALTGFAGTSNVAAAVRWGLPASGTMAHSYVEAFPDEEAAFRAFARAHPGPVT FT FLVDTYDSVRGVRTAARVLRDLGRGPGCAVRLDSGDLGDLARRARAELDRSGLPGVRVV FT ASGGLDEYGVDTLVRSGAPIDVYAVGTRVGTSADAPYLDSAYKLVEYDGRPVMKLSSAK FT VTSPGRKQVFRRPGGDDVIALRDEPGPAGAEPLLRTVMRDGRRLGPPDTLPQGHARLTA FT DLAGLPADAVRVRAPRPARAVFSERLSELTADLSDRLRS" FT CDS 162661..163119 FT /transl_table=11 FT /gene="SCO0172" FT /gene_synonym="SCJ1.21" FT /product="hypothetical protein" FT /note="SCJ1.21, hypothetical protein, len: 152 aa. Similar FT to many hypothetical proteins including: Mycobacterium FT tuberculosis TR:O53472 (EMBL; AL021899) hypothetical 31.5 FT KD protein MTV018.13C (294 aa), fasta scores opt: 248 FT z-score: 298.8 E(): 2.8e-09 35.6% identity in 160 aa FT overlap and Methanobacterium thermoautotrophicum TR:O27074 FT (EMBL; AE000872) conserved protein (143 aa), fasta scores FT opt: 195 z-score: 241.7 E(): 4.2e-06 32.4% identity in 142 FT aa overlap. Contains a Pfam match to entry PF00582 Usp, FT Universal stress protein family." FT /db_xref="GOA:Q9RIZ3" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ3" FT /protein_id="CAB53139.1" FT /translation="MQPSEPTARVVVGVDGSPSSYAALRWADRYARAVGGVVEAVHVWD FT TPSAVGFAGPAIDPDFDLEQARERFAAELEATFPGERPPGLKEILVEGDPSETLIRASQ FT GAELLVVGRRGRGAFARAMLGSVSQRCAQHAACPVVVVRQETESDPVH" FT misc_feature 162775..163086 FT /note="Pfam match to entry PF00582 Usp, Universal stress FT protein family, score 55.10, E-value 1.6e-12" FT CDS complement(163235..164017) FT /transl_table=11 FT /gene="SCO0173" FT /gene_synonym="SCJ1.22c" FT /product="hypothetical protein SCJ1.22c" FT /note="SCJ1.22c, unkown, len: 260 aa." FT /db_xref="GOA:Q9RIZ2" FT /db_xref="InterPro:IPR003718" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ2" FT /protein_id="CAB53140.1" FT /translation="MCSHGARGRAPGPGDTRPGRRETGPGPADGNEADRRNPAGDEMKL FT HTRCGRTINVTRFTPRGLPTRMGRVVLDTSFASYDEDELWTSLTAEEARRLAGLLLFQA FT AAVDPEPSAAPGVVEVVPVVQDAYEVRVRGHVLTVDQPLADGGKDTAPTPVELFVAAVA FT SCAAHYAGRFLDRHGAGREGFSVRAGFRMADDRPPRVASLLLTVTAPTVPAGKLAALRA FT VVSHCTVTNTLARAPETTLEVRGAPSEESARDTQTSPH" FT CDS complement(164023..164994) FT /transl_table=11 FT /gene="SCO0174" FT /gene_synonym="SCJ1.23c" FT /product="putative DNA-binding protein" FT /note="SCJ1.23c, possible DNA-binding protein, len: 323 aa. FT Similar in parts to many, e.g. Mycobacterium tuberculosis FT TR:O53625 (EMBL; AL021428) hypothetical 16.6 KD protein FT MTV030.24 (152 aa), fasta scores opt: 224 z-score: 258.5 FT E(): 4.9e-07 34.3% identity in 134 aa overlap and FT Mycobacterium tuberculosis SW:YU07_MYCTU (EMBL; Z77163) FT hypothetical 8.6 KD protein MTCY339.07C (80 aa), fasta FT scores opt: 182 z-score: 216.4 E(): 0.00011 42.3% identity FT in 71 aa overlap. Also similar to TR:Q9RJ05 (EMBL:AL109962) FT Streptomyces coelicolor possible DNA-binding protein FT SCJ1.09c, 233 aa; fasta scores: opt: 516 Z-score: 566.6 FT E(): 6.3e-24; 37.615% identity in 218 aa overlap. Contains FT a Pfam match to entry PF01381 HTH_3, Helix-turn-helix and a FT possible helix-turn-helix motif at residues 127..148 (+2.82 FT SD)" FT /db_xref="GOA:Q9RIZ1" FT /db_xref="InterPro:IPR011576" FT /db_xref="UniProtKB/TrEMBL:Q9RIZ1" FT /protein_id="CAB53141.1" FT /translation="MGAVSPREAGVRNSFDGEGAVMYAHLGDRLIVESPSTGVTRRDGE FT IVGLHHDDGTPPYDVRWSDTGDVTLVFPGPDARVNHGAEEAEASQGAPSGVSRGEGVDS FT SLIAAGAGDLGRRLAAARRRRGLSLEQVARRARMAPQYLAYLETHTADPGFGSLVRLAD FT ALGTTYAELQGGGADRPPGQGAALRNPTLRDLDEKECRALLSAHGVGRLALNTPDGPAV FT FPLNYVVSQGTIAFRTDPDAATAAAVDSEVAFEVDHIDDPMSQGWSVLAVGRCRAVTDP FT EEVRRLAEKAHTEPWAGGRRTMWLAVETERLTGRRITSVSGS" FT misc_feature complement(164479..164643) FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 39.60, E-value 7.1e-08" FT CDS complement(165059..165406) FT /transl_table=11 FT /gene="SCO0175" FT /gene_synonym="SCJ1.24c" FT /product="hypothetical protein SCJ1.24c" FT /note="SCJ1.24c, unknown, len: 115 aa." FT /db_xref="UniProtKB/TrEMBL:Q9RIZ0" FT /protein_id="CAB53142.1" FT /translation="MTCSPAERSVGWSSRTGSAGSGPSDLADEIRLRHDADEAADAVHH FT QDGGDVVMGQCLGDRLEGCVRSDVDDGPGHEITYSPVPHDEPPLGGEPPWSTDATAVRT FT SSLSTCRSEPP" FT CDS 165460..165855 FT /transl_table=11 FT /gene="SCO0176" FT /gene_synonym="SCJ1.25" FT /product="hypothetical protein SCJ1.25" FT /note="SCJ1.25, unknown, len: 131 aa." FT /db_xref="InterPro:IPR007055" FT /db_xref="UniProtKB/TrEMBL:Q9RIY9" FT /protein_id="CAB53143.1" FT /translation="MEAARLMVTEEVKCLTVVDEADRWVGVVSRGDLLRVSLRRDDALR FT EETSRAVLIRTRGPAPTGMTVDVDEGRVTVGGRVDNGQPLPVIERLCLGVDGVASVDLH FT VTGREDRTRPVDTLGRARPTTLHVDVP" FT CDS 166033..166614 FT /transl_table=11 FT /gene="SCO0177" FT /gene_synonym="SCJ1.26" FT /product="putative membrane protein SCJ1.26" FT /note="SCJ1.26, possible membrane protein, len: 193 aa. FT Similar to Mycobacterium tuberculosis TR:P71991(EMBL; FT Z81360) hypothetical 22.5 KD protein (210 aa), fasta scores FT opt: 287 z-score: 333.1 E(): 3.4e-11 35.2% identity in 182 FT aa overlap and S. coelicolor TR:Q9ZBP2 (EMBL;AL034492) 50KD FT proline rich protein (456 aa), fasta scores opt: 338 FT z-score: 385.2 E(): 4.3e-14 35.6% identity in 188 aa FT overlap. Contains possible membrane-spanning hydrophobic FT region." FT /db_xref="UniProtKB/TrEMBL:Q9RIY8" FT /protein_id="CAB53144.1" FT /translation="MRAGTTIRRSLWRWRRNPLRRREDVLEAWILLIVWLVVALAGPVA FT GVLAAHASAHGAAQRRAERHSATATLVSDVSGSPLSTGTAGGRIEATVRWTAPDGTRHS FT GKIPVDEAMKAGSRVTVWTDHRNQLTTAPPTTAQAGVDAAFMGAASSFAVVTAAAAGYY FT GARVVLNRRRRAAWEHEWQDIGSQWGRAAS" FT CDS 166891..167337 FT /transl_table=11 FT /gene="SCO0178" FT /gene_synonym="SCJ1.27" FT /product="hypothetical protein SCJ1.27" FT /note="SCJ1.27, unknown, len: 148 aa. Weak similarity to FT Mycobacterium tuberculosis SW:YW23_MYCTU (EMBL; Z74025) FT hypothetical 33.9 KD protein MTCY39.23C (317 aa), fasta FT scores opt: 201 z-score: 231.7 E(): 1.5e-05 33.1% identity FT in 136 aa overlap and Mycobacterium tuberculosis TR:O06189 FT (EMBL; Z95387)hypothetical 31.7 KD protein MTCY1A10.09C FT (297 aa), fasta scores opt: 199 z-score: 229.8 E(): 1.9e-05 FT 33.3% identity in 153 aa overlap." FT /db_xref="GOA:Q9RIY7" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q9RIY7" FT /protein_id="CAB53145.1" FT /translation="MLVAQALSAAAVVVGHRGPHPFQGALIGSLATGLAAHSECPVVVV FT GEPENPAGPVALGVDGSAAGAAAVRLPGDFRAGCGHHRRARLDGLERADAASPRRETEP FT YACEPGMLAAEEGRLLAETLAGMCARYPEVRVERSTVHGVHGRR" FT CDS complement(167444..168514) FT /transl_table=11 FT /gene="SCO0179" FT /gene_synonym="SCJ1.28c" FT /product="putative zinc-containing dehydrogenase" FT /note="SCJ1.28c,possible zinc-containing dehydrogenase, FT len: 356 aa. Similar to many including: Thermoanaerobacter FT brockii SW:ADH_THEBR (EMBL; X64841) NADP-dependent alcohol FT dehydrogenase (EC 1.1.1.2) (352 aa), fasta scores opt: 556 FT z-score: 601.1 E(): 4e-26 33.7% identity in 338 aa overlap FT and Halobacterium volcanii TR:O34179 (EMBL; U95372) FT dehydrogenase (389 aa), fasta scores opt: 715 z-score: FT 770.1 E(): 0 37.0% identity in 351 aa overlap. Contains a FT Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases and a PS00059 Zinc-containing alcohol FT dehydrogenases signature" FT /db_xref="GOA:Q9RIY6" FT /db_xref="HSSP:1KOL" FT /db_xref="InterPro:IPR013154" FT /db_xref="UniProtKB/TrEMBL:Q9RIY6" FT /protein_id="CAB53146.1" FT /translation="MKGYVFHGPGRSAWEDIPDPELKEPTDAIVRVDAVTICGTDLHIL FT KGDVPEVRPGTVLGHEAVGEIVEVGTDVRTVRPGDRVLVSCITACGRCRYCREGVYGQC FT LGGGGWILGHLINGTQAEYVRVPYADLSVHSLPGAVTDEDAVLLADIFPTAYEVGVLNG FT RVSPGDTVVVVGAGPIGLAAVATARLFAPERIVVVDLATARLEAARKLGAEAVADARED FT PEQLVADLTGGLGADVVIEAVGVPETFEMCTRVVRPGGHVANVGVHGRPATLHLEDLWS FT KNVTVTTGLVDTRSTPTLLRMAASGRLPTGQLVTHTFPLERMEEAYEVFSAAADTGALK FT VVLGGPKREVVAANAV" FT misc_feature complement(167483..168487) FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score 236.60, E-value 3.4e-67" FT misc_feature complement(168296..168340) FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature, GHE.{2}G.{5}[GA].{2}[IVSAC], info count = 21.8" FT RBS complement(168528..168533) FT CDS complement(168705..169556) FT /transl_table=11 FT /gene="SCO0180" FT /gene_synonym="SCJ1.29c" FT /product="conserved hypothetical protein SCJ1.29c" FT /note="SCJ1.29c, unknown, len: 283 aa. Similar to many FT including: Mycobacterium tuberculosis TR:O53472 (EMBL; FT AL021899) hypothetical 31.5 KD protein (294 aa), fasta FT scores opt: 329 z-score: 389.0 E(): 2.6e-14 32.1% identity FT in 293 aa overlap and Mycobacterium tuberculosis TR:O06189 FT (EMBL; Z95387) hypothetical 31.7 KD protein (297 aa), fasta FT scores opt: 330 z-score: 390.1 E(): 2.3e-14 31.8% identity FT in 296 aa overlap. Also similar to S. coelicolor SCJ1.16c FT (294 aa), fasta scores opt: 806 z-score: 748.1 E():0 46.1% FT identity in 295 aa overlap. Contains a Pfam match to entry FT PF00582 Usp, Universal stress protein family" FT /db_xref="GOA:Q9RIY5" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q9RIY5" FT /protein_id="CAB53147.1" FT /translation="MYLPLVVGVDGSEPSLRAVDWAADEAALHAVPLWVVFGDLWERYE FT GAALAREPGKPSTDMQADDILAAAAIRAGRRHPDLVVTTETVPDEAEHALICAGRNASM FT IVMGSRGRSGIADRLLGSVSRTVAAGSDCPVVVLRGNHDNRAIGGRNGRIVVGVGEVSA FT SVLRLAFMEARLRQVPVAAVRAWRCPAHETIDHPLPAGEPARRYEERAARELEAALEDA FT PPDVAVRRYTVEGPARAVLPAASAEAGLLVIGRRTQGRLGRVAHAVLHRSACPVVVVPE FT RT" FT misc_feature complement(169143..169481) FT /note="Pfam match to entry PF00582 Usp, Universal stress FT protein family, score 34.80, E-value 2e-06" FT RBS complement(169563..169570) FT CDS complement(169584..170570) FT /transl_table=11 FT /gene="SCO0181" FT /gene_synonym="SCJ1.30c" FT /product="hypothetical protein SCJ1.30c" FT /note="SCJ1.30c, unknown, len: 328 aa. Similar to many FT including: Mycobacterium tuberculosis SW:YW23_MYCTU (EMBL; FT Z74025) hypothetical 33.9 KD protein MTCY39.23C (317 aa) FT fasta scores opt: 382 z-score: 439.2 E(): 4.2e-17 32.6% FT identity in 319 aa overlap and Mycobacterium tuberculosis FT TR:O53472 (EMBL; AL021899) hypothetical 31.5 KD protein FT (294 aa), fasta scores opt: 382 z-score: 439.2 E(): FT 4.2e-17 32.6% identity in 319 aa overlap. Contains a Pfam FT match to entry PF00582 Usp, Universal stress protein FT family." FT /db_xref="GOA:Q9RIY4" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q9RIY4" FT /protein_id="CAB53148.1" FT /translation="MSEDEWPYPGAQLRDTLESEGPTREVRDMTRTITVGIDGSPESHA FT AAEWAAREAELRDLPVRLLHVWEPAPAVLAQDSILGAKTHQHWTERVPQKVGEGLRLRH FT PGVVVTSDQRSGPPADTLVRDADGAELLVLGSRAPSGLGGFLAGSVGQSVIAHSETPVV FT LVRAGEQAAGEHVVDSVGVPPAANRRRPVVVGLDIGSPDDGVLSFAFDEAQRRGTAVHV FT VSGWRPPPYYPSLTAGGVPDQGVARRKAADLTRLLLPWRQSYPDVEVVEASRPGSPADL FT LAEASHEASLVVVGRRIRPSPLGVHIGAVAHAVLHRVSAPVAVVAHP" FT misc_feature complement(169596..169919) FT /note="Pfam match to entry PF00582 Usp, Universal stress FT protein family, score 42.80, E-value 7.5e-09" FT CDS complement(170656..170880) FT /transl_table=11 FT /gene="SCO0182" FT /gene_synonym="SCJ1.31c" FT /product="hypothetical protein" FT /note="SCJ1.31c, doubtful CDS, len: 74 aa. Contains a FT TTA/leucine codon, possible target for bldA regulation." FT /db_xref="UniProtKB/TrEMBL:Q9RIY3" FT /protein_id="CAB53149.1" FT /translation="MCRAAVGVLEAGARREGVTCGTYGLWDGVTAWREPRSSMPDLTQV FT LKPIEGSDLVPAASVVAAHAEDRLKGEGH" FT misc_feature complement(170806..170808) FT /note="TTA/leucine codon, possible target for bldA FT regulation." FT CDS 170911..172158 FT /transl_table=11 FT /gene="SCO0183" FT /gene_synonym="SCJ1.32" FT /product="deoxiribopirymidine photolyase" FT /note="SCJ1.32, unknown,len: 415 aa. Likely to have arisen FT as a result of a duplication of SCF43A.31/32, followed by a FT deletion event generating a possible CDS with the 5' coding FT sequence of SCF43A.31 and the 3' coding sequence of FT SCF43A.32. Similarity scores are as follows: to FT Streptomyces coelicolor TR:CAB48918 (EMBL; AL096837) FT putative oxidoreductase SCF43A.31 (520 aa), fasta scores FT opt: 1191 z-score: 1365.3 E(): 0 64.2% identity in 307 aa FT overlap and to Streptomyces coelicolor TR:CAB48919(EMBL; FT AL096837) putative deoxyribodipyrimidine photolyase FT SCF43A.32 (458 aa), opt: 909 z-score: 1043.2 E(): 0 45.7% FT identity in 418 aa overlap. Contains a PS00394 DNA FT photolyases class 1 signature 1 and a PS00691 DNA FT photolyases class 1 signature 2." FT /db_xref="GOA:Q9RIY2" FT /db_xref="HSSP:1DNP" FT /db_xref="InterPro:IPR018394" FT /db_xref="UniProtKB/TrEMBL:Q9RIY2" FT /protein_id="CAB53150.1" FT /translation="MRRIVYLGGLTPRGVPERTLSPHLRSRAEVGPILVRDVLHYLAGA FT ATMPDDIDRAFDVGGPDVPTYREMMRRHATVSGLRRRIIVPAPVLTPGLSSHWVGLVTP FT VPASIARPLTESLRHEVVCQEHDIARYVPDAPGRPLPFDVALTLALRRVREAQVATRWS FT SASVPGAPSDPLPTDPDWAGGSLYEDERHLPVDASPEALWKVVEGIGGDNGWYSFPPAW FT AVRGWLDRFVGGVGLRRGRRDAQRLHPARPVAWRGGRRRGHRRLAGRTGYPVVDAAMRQ FT LRHQGWMHNRARLLVASFLTKTLYVDWRIGARHFLDLLVDGDVVNNQLNWQWAAGTGTD FT TRPHRVLNPLVQARRFDPDGVYVRRWVPELRSVEGGKVHEPWRLAAAERGELDYPDPLV FT ELADGLARFKHARGRD" FT misc_feature 171718..171756 FT /note="PS00394 DNA photolyases class 1 signature 1" FT misc_feature 171778..171837 FT /note="PS00691 DNA photolyases class 1 signature 2" FT CDS 172170..173984 FT /transl_table=11 FT /gene="SCO0184" FT /gene_synonym="SCJ1.33" FT /product="conserved hypothetical protein SCJ1.33" FT /note="SCJ1.33 unknown, len: 604 aa. Highly similar to FT Synechocystis sp. (strain PCC6803) TR:P74080 (EMBL;D90912) FT hypothetical 58.1 KD protein (504 aa), fasta scores opt: FT 931 z-score: 996.4 E(): 0 38.8% identity in 479 aa overlap FT and Methanobacterium thermoautotrophicum TR:O27804 FT (EMBL;AE000932) conserved protein MTH1776 (491 aa), fasta FT scores opt: 572 z-score: 613.5 E(): 8.1e-27 31.7% identity FT in 483 aa overlap. Also shares a low level of similarity FT with Streptomyces coelicolor TR:CAB48919 (EMBL;AL096837) FT putative deoxyribodipyrimidine photolyase SCF43A.32 (458 FT aa), fasta scores opt: 176 z-score: 191.4 E(): 0.0026 31.1% FT identity in 219 aa overlap." FT /db_xref="GOA:Q9RIY1" FT /db_xref="InterPro:IPR007357" FT /db_xref="UniProtKB/TrEMBL:Q9RIY1" FT /protein_id="CAB53151.1" FT /translation="MHWLFGDQLGPHFLTPGEEGPGPETPLLMIEARSVFRRRRFHRAK FT AHLVLSAMRHRAAEPGDRVTYVRADTYRQGLARTARGRPVGVHHPTSHAALRLVRALPQ FT VTVGPARGFLVPMTGFAAWAEGHGGKRLRQEDFYRWVRRGHGLLMDGEQPAAGRWNLDH FT DNREPPPREAASLQVGRPYRPREDDIDEEVRHDLDRWERDGDVSFVGRDGPRLFPATRT FT EGLRALRRFVEHRLATFGPHEDAMLAADPVMSHSLLSSTLNLGPLDPVECVERAERAWR FT EGRAPLNSVEGFVRQIAGWREYVWQLYWYFGEGYRRSNALGHTAPLPDWWNRLDADAVR FT ANCLRTVLAQVRDTGWTHHIPRLMVLGSHALQRGWDPAAVTNWFHRCFVDGYDWVMLPN FT VVGMSQYADGGRMTTKPYTSAGAYVNRMSDLCGPCGYRPGDRTCEHACPYTTGYWAFLD FT RHRELLAGNQRVARPVRQSDRLADLPDVCAQGTRGVTHRHEPPPLRRRGEVGPHPVPER FT AEVSASTTGHPAEAVACGQPRVRRGCACLDCRRWWPRRPNRSTTPSPRPMRRTRSTPSS FT GGYWTNGCATAVPSTPSSPGNWPTVSRR" FT CDS 173768..174946 FT /transl_table=11 FT /gene="SCO0185" FT /gene_synonym="SCJ1.34" FT /gene_synonym="crtB" FT /product="putative geranylgeranyl pyrophosphate synthase" FT /note="SCJ1.34, crtB, possible geranylgeranyl pyrophosphate FT synthase, len: 392 aa. Shares a high level of similarity FT with Streptomyces griseus TR:Q54193 (EMBL:L37405) FT geranylgeranyl pyrophosphate synthase (425 aa), fasta FT scores: opt: 964 z-score: 1076.9 E(): 0 48.0% identity in FT 381 aa overlap and Mycobacterium tuberculosis TR:O53507 FT (EMBL:AL021957) geranylgeranyl pyrophosphate synthase (352 FT aa), fasta scores opt: 742 z-score: 831.2 E(): 0 43.0% FT identity in 328 aa overlap. Contains a PS00723 Polyprenyl FT synthetases signature 1" FT /db_xref="GOA:Q9RIY0" FT /db_xref="InterPro:IPR000092" FT /db_xref="UniProtKB/TrEMBL:Q9RIY0" FT /protein_id="CAB53152.1" FT /translation="MRTTESEKGLRMPGLPPMVAPPAEQVDDPVTATDAANAVDAVLRG FT VLDERLRHCRAVDPLFARELADRLAALTARGGKRLRTAFAHCGWRAAGGSGDATAVLRT FT GAALELLQACALVHDDVMDGSVQRRGAPALHVDLARGHWAAGMHGSSESFGTSAAVLTG FT DLALAWADDLLTETALGTPHGPRLHGEWRAMRTEMVAGQYRDLHAQAARSSGVDEALAI FT ATLKSALYTVARPLALGAVLAGAADGDALEALRAAGRCAGLAFQLRDDLLGAFGDPALT FT GKPADDDLRSRKLTYLLAVAVRLADAADDHLAAAALAPDADPKSEKAVRQVRSALVRTG FT ARDLVETKIGELTDMSLAHFDRCGARPAVRHEFAALIGRATGAVPRGTGEVV" FT misc_feature 174113..174157 FT /note="PS00723 Polyprenyl synthetases signature 1, FT [LIVM]{2}.DD.{2,4}D.{4}RR[GH], info count = 26.9" FT CDS 174943..176514 FT /transl_table=11 FT /gene="SCO0186" FT /gene_synonym="SCJ1.35" FT /gene_synonym="crtE" FT /product="putative phytoene dehydrogenase (phytoene FT desaturase) (putative secreted protein)" FT /note="SCJ1.35, crtE, probable phytoene dehydrogenase FT (phytoene desaturase) (putative secreted protein), len: 523 FT aa. High level of similarity to Streptomyces griseus FT SW:CRTI_STRGR (EMBL; L37405) phytoene dehydrogenase (EC FT 1.3.-.-) (phytoene desaturase) (507 aa), fasta scores opt: FT 2459 z-score: 2615.3 E(): 0; 74.5% identity in 501 aa FT overlap and Streptomyces setonii SW:CRTI_STRSE (EMBL; FT D55723) phytoene dehydrogenase (EC 1.3.-.-) (phytoene FT desaturase) (508 aa), fasta scores opt: 2455 z-score: FT 2611.0 E(): 0; 74.3% identity in 498 aa overlap. Contains a FT PS00982 Bacterial-type phytoene dehydrogenase signature" FT /db_xref="GOA:Q9RIX9" FT /db_xref="InterPro:IPR008150" FT /db_xref="UniProtKB/TrEMBL:Q9RIX9" FT /protein_id="CAB53153.1" FT /translation="MRRVPGPTGHVVVVGAGLSGLACALHLLGAGRRVTVVERDAGPGG FT RSGRVRLGGYELDTGPTVLTMPHLADEAFAAVGDSLRRRVELTALDPAYRACFADGSAL FT DVHTDGEAMEAEVRRFAGPAQAAGYRDLRRWLERLYRAQMRRFIDTNFDSPLQLLHPDL FT ARLAALGGFGRLDGRIGRFLSDERLRRVFSFQALYAGVAPARALAAYAVIAYMDTVAGV FT WFPKGGMHALPRAMADAAATAGADLRWSAEVKALERSAGRVRAVHLASGERIACDAVVL FT TCELSTAYGLLGRAPRRPARLRHSPSAVILHAGTDRTWPHLAHHTLSFGAAWERTFEEL FT TRTGELMSDPSLLITRPTTHDPALAPPGRHLHYVLAPCPNTDVGPDAVAWRDLGPRYRE FT SLVGVLESRGLEGFADSVQEELLVTPLDWDAQGHAAGSPFSVSHTFAQTGPFRPRNLVR FT GLDNVVLAGCGTTPGVGVPTVLVSGKLAAARVTGGAGSRPARTRRSPAVSDPCPAPVPA FT GADDPS" FT misc_feature 176326..176388 FT /note="PS00982 Bacterial-type phytoene dehydrogenase FT signature" FT CDS 176501..177496 FT /transl_table=11 FT /gene="SCO0187" FT /gene_synonym="SCJ1.36" FT /gene_synonym="crtI" FT /product="putative phytoene synthase" FT /note="SCJ1.36, crtI, probable phytoene synthase, len: 331 FT aa. Shares a high level of similarity with Streptomyces FT griseus SW:CRTB_STRGR (EMBL; L37405) phytoene synthase (342 FT aa), fasta scores opt: 1388 z-score: 1657.5 E(): 0 67.6% FT identity in 343 aa overlap and Mycobacterium marinum TR: FT O05423 (EMBL; U92075) phytoene synthase (319 aa), fasta FT scores opt: 996 z-score: 1191.5 E():0 52.2% identity in 316 FT aa overlap. Contains a PS01045 Squalene and phytoene FT synthases signature 2 and a Pfam match to entry PF00494 FT SQS_PSY, Squalene and phytoene synthases" FT /db_xref="GOA:Q9RIX8" FT /db_xref="InterPro:IPR019845" FT /db_xref="UniProtKB/TrEMBL:Q9RIX8" FT /protein_id="CAB53154.1" FT /translation="MTRRELDAAGITDPLLRAAYTRCRRLNARHGKTYFLATRLLPLER FT RSAVHALYGFARWADDIVDDLDRHRTAGERDRALRRLESDLADGLRTGTGREPVVRAVA FT DTADRYDIDHVLFADFLSSMRADLTVTHYPTYADLQAYVHGSAAVIGLQMLPVLGTVTD FT RKEAAPHAAALGVAFQLTNFLRDVGEDLDRGRVYLPGSLLAAHGVDRPLLEWSRRTGRR FT DRRIRAALVAAEAMTRRVYRTAEPGIAMLDPRVRPCIRAAFTLYGGILDAIAEQDYTVL FT HRRAVVSRRRRAATAAEGVLCVAAARWRARTSPRVEAAGGPAAEWQGPVR" FT misc_feature 176645..177415 FT /note="Pfam match to entry PF00494 SQS_PSY, Squalene and FT phytoene synthases, score 253.20, E-value 3.5e-72" FT misc_feature 177020..177097 FT /note="PS01045 Squalene and phytoene synthases signature 2" FT CDS 177493..178503 FT /transl_table=11 FT /gene="SCO0188" FT /gene_synonym="SCJ1.37" FT /gene_synonym="crtV" FT /product="putative methylesterase" FT /note="SCJ1.37, crtV, probable methylesterase, len: 336 aa. FT Highly similar to Streptomyces griseus TR:P72448 (EMBL; FT X95596) methylesterase (338 aa), fasta scores opt: 1315 FT z-score: 1538.7 E(): 0 60.5% identity in 337 aa overlap" FT /db_xref="GOA:Q9RIX7" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/TrEMBL:Q9RIX7" FT /protein_id="CAB53155.1" FT /translation="MSGRRGGRRWSPPVRRRGAGPDWAAQTPTWRQARPSLIADALERA FT SARPSGNWFVVGASRQVRAGDRPYGRTVGGVEVVLWRSDDGEPRAGSGICPHLGAPLRD FT SRVVCGTLVCHWHGLALDGSASAGWRPFPVHDDGVLVWVRLDEVGGEEPTERPVVPTRP FT ATGRGVDSVFTATGRCEPQDVVANRLDPWHGSWFHPYSFVDLSVVREPQGGEDDAFVVD FT VSFRVAGRLVVPVRAEFTAPEPRTVVMRITDGEGATSVVETHATPLTGPDHERPRTAVV FT EAVVAASDRPGFALARAAAPVLRPLMRRTAGRLWRDDLAYAERRWALRSTGRFPG" FT CDS complement(178519..180087) FT /transl_table=11 FT /gene="SCO0189" FT /gene_synonym="SCJ1.38c" FT /gene_synonym="crtU" FT /product="putative dehydrogenase" FT /note="SCJ1.38c, crtU, probable dehydrogenase, a partial FT CDS, len: >336 aa. Highly similar to Streptomyces griseus FT TR:P72449 (EMBL:X95596) dehydrogenase (517 aa), fasta FT scores opt: 1277 z-score: 1459.8 E():0 69.0% identity in FT 281 aa overlap and Synechocystis sp SW:CRTI_SYNY3 (EMBL; FT X62574) phytoene dehydrogenase (427 aa), fasta scores opt: FT 133 z-score: 155.8 E():0.25 24.6% identity in 260 aa FT overlap." FT /note="SCJ12.01c, crtU, probable dehydrogenase, partial FT CDS, len: >278 aa. Highly similar to Streptomyces griseus FT TR:P72449 (EMBL:X95596) dehydrogenase (517 aa), fasta FT scores opt: 1311 z-score: 1471.3 E(): 0 74.0% identity in FT 269 aa overlap and Synechocystis sp. (strain PCC 6803) FT SW:CRTI_SYNY3 (EMBL:X62574) phytoene dehydrogenase (EC FT 1.3.-.-) (phytoene desaturase) (427 aa), fasta scores opt: FT 219 z-score: 250.2 E(): 1.4e-06 27.6% identity in 254 aa FT overlap." FT /db_xref="GOA:Q8CK66" FT /db_xref="InterPro:IPR000276" FT /db_xref="UniProtKB/TrEMBL:Q8CK66" FT /protein_id="CAD55427.1" FT /translation="MTVRRTAAARRGRDRKAEIVFPAPGADRFGRGDEPSVAVIGGGIA FT GLAAATLMAERGARVTLYEKEDAVGGRLSGRRTTLADGSAVTMTRGFHAFFRQYYNLRG FT LLRRTDPGLDRLTPLPDYPLRHSGGLTDGFARVPRTPPLSAIGFVALSPTFGWRDLAAM FT DPRAALPLLDVRVPQVYERFDGVTATAFLESVRFPEAAHHLAFEVFSRSFFADPRRLSA FT AELLLMFHIYFLGSSEGLLFDVPVEPFPQALWNPLGDYLRRLGADVRTGTPVHGILPRA FT DGGADVLTDTGADRHQAVVLALDTAGLRQTVAASPGLGTDTWRDGIAALRTAPPFLVSR FT LWLDRPVDADRPGFLGTSGYGGLDNVSVLERYEGEAARWAARTGGSVVELHAYAVDPAA FT EPKEVQDELVDRLHQAYPETREARVVDARHEWRADCPMFEVGSHRRRPTVRTPHPWLTL FT AGDGIRCDLPVALMERAATTGFLAANALLADRGVRGQVLWTVPRTGRSPVLRAFGAVAG FT HRSAP" FT misc_feature complement(179252..179384) FT /note="overlap with StJ12" FT misc_feature 179252..179384 FT /note="665 (-1) 36793 36925 overlap with cosmid StJ1" FT CDS complement(180084..180824) FT /transl_table=11 FT /gene="SCO0190" FT /gene_synonym="SCJ12.02c" FT /gene_synonym="crtT" FT /product="putative methyltransferase" FT /note="SCJ12.02c, crtT, probable methyltransferase, len: FT 246 aa. Shares a high level of sequence similarity with FT Streptomyces griseus TR:P72450 (EMBL:X95596) FT methyltransferase (242 aa), fasta scores opt: 984 z-score: FT 1164.2 E(): 0 65.0% identity in 234 aa overlap. Contains a FT Pfam match to entry PF01209 Ubie_methyltran, ubiE/COQ5 FT methyltransferase family" FT /db_xref="GOA:Q9RI56" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q9RI56" FT /protein_id="CAB53414.1" FT /translation="MTLLRDHDLARAFDHASHTYDGLTALNPGYRTGLLRSARRLALPA FT DGAGLHLLDLGCGTGASTRALLRAAPRARITAVDASAGMLRRALVKPWPARVRFLHLTA FT EEFATTREDEGPFDAVFAAYLFRNVTDPDAVLRAVRQLLRPGGRFAAHEYSLSGSPGHR FT ALWSAVCRGVVIPAGTLTGDRTLYRHLRRSVVAFDTAPEFAARLTRAGLTSVRVAPVAG FT WQTGIVHTFLARNGGPTTTEERVL" FT RBS complement(180096..180101) FT misc_feature complement(180123..180824) FT /note="Pfam match to entry PF01209 Ubie_methyltran, FT ubiE/COQ5 methyltransferase family, score -45.20, E-value FT 1.1e-08" FT CDS complement(180821..182038) FT /transl_table=11 FT /gene="SCO0191" FT /gene_synonym="SCJ12.03c" FT /gene_synonym="crtY" FT /product="putative lycopene cyclase" FT /note="SCJ12.03c, crtY, probable lycopene cyclase, len: 405 FT aa. Highly similar to Streptomyces griseus TR:P72451 FT (EMBL:X95596) lycopene cyclase (418 aa), fasta scores opt: FT 1426 z-score: 1602.7 E(): 0 56.3% identity in 396 aa FT overlap" FT /db_xref="GOA:Q9RI55" FT /db_xref="InterPro:IPR008671" FT /db_xref="UniProtKB/TrEMBL:Q9RI55" FT /protein_id="CAB53415.1" FT /translation="MTPRSAQDSDVLVIGGGAAGLSLAHRLTENGTAPAMTLVEPPDGP FT LRPAERTWCYWGAAADGLEEAVGASWSVLRLHGADGGSVTVDPAPFTYRMVRSADFERM FT VHGRLARTDGARLLRGTAESVRAVPAGTEVRCTLPGGRPLTLYARRVFDSRPLPELPPA FT RTCLLQHFRGWFVHTRTDRFDPAVADLMDFRVPQPAHGLAFGYVLPLAPDRALVEYTEF FT SRAPLTTEAYESALGHYCRDILGLGELTVERTEQGVIPMTDARFPGRAGPAVYRIGTAG FT GATRPATGYTFAAVQRHSGAIAAALRDGHDRVPAPHGRRARAMDAVLLRALDTGRIDGP FT RFFTDLFRRVPAERLLRFLDGTTSLREEWGIGLRTPVRPMLRTAAEVPFLPRRSQPLAR FT TGGNNR" FT CDS complement(182309..183559) FT /transl_table=11 FT /gene="SCO0192" FT /gene_synonym="SCJ12.04c" FT /product="putative oxidoreductase" FT /note="SCJ12.04c, possible oxidoreductase, len: 416 aa. FT Similar to many protoporphyrinogen oxidases including: FT Propionibacterium freudenreichii shermanii SW:PPOX_PROFR FT (EMBL:D85417) HemY (527 aa), fasta scores opt: 228 z-score: FT 249.0 E(): 1.6e-06 26.8% identity in 504 aa overlap and FT Bacillus subtilis SW:PPOX_BACSU (EMBL; M97208) HemY (470 FT aa), fasta scores opt: 209 z-score: 229.3 E(): 2.1e-05 FT 25.7% identity in 311 aa overlap. Contains a Pfam match to FT entry PF01593 Amino_oxidase" FT /db_xref="GOA:Q9RI54" FT /db_xref="InterPro:IPR002937" FT /db_xref="UniProtKB/TrEMBL:Q9RI54" FT /protein_id="CAB53416.1" FT /translation="MSDGQHRAADAVVVGAGLAGLACALDLCRAGWRVALLEASDGVGG FT RMRTDRRDGFLLDRGFQVFNTSYPQVKRRMELKSLRLRPFTAGVVAHTSNGPVRLADPT FT REPRAAGTLLPGRALPARDLAALAALTARDAVLPVAVTRRRRDRPTSAALSRVGLSDAA FT IAGILRPFLSGVFLEDRLETSARFFHLVWRSMVRGSLCLPAEGIGAVPAQLADGLPDGV FT LRLGTPVAEITDAGVLLGDGGEVPARVVVVATDPATAAGLLPDLTVPDTRTVTTYYHAT FT DSPPTAEPILMVDSTGAILNTCVLSQVAPTYAPPGTGLVSTSVLGTDPPGRAQAVLRRL FT AELYGTDTSGWEQVAARTVDGALPAMLPPWPLSRTTRIGPGRYVCGDHRATGSVQGALA FT SGTRAAREVRADREPQR" FT misc_feature complement(182333..183508) FT /note="Pfam match to entry PF01593 Amino_oxidase, score FT -105.60, E-value 0.0012" FT RBS complement(183564..183568) FT CDS complement(183793..184797) FT /transl_table=11 FT /gene="SCO0193" FT /gene_synonym="SCJ12.05c" FT /product="putative DNA-binding regulator" FT /note="SCJ12.05c, possible DNA-binding regulator, len:334 FT aa. Some similarity to Myxococcus xanthus TR:Q50900 FT (EMBL:Z21955) regulatory protein (299 aa), fasta scores FT opt: 121 z-score: 141.6 E(): 1.6 32.4% identity in 281 aa FT overlap and Myxococcus xanthus TR:Q50899 (EMBL:Z21955) FT regulatory protein (288 aa), fasta scores opt: 118 z-score: FT 138.5 E() 2.4 26.9% identity in 279 aa overlap. Contains a FT possible helix-turn-helix motif between aa's 23..44." FT /db_xref="GOA:Q9RI53" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q9RI53" FT /protein_id="CAB53417.1" FT /translation="MNAYTGDGDEPVDDGGPRRGGLTTGEVARRLGVAPTTVRTWDRRY FT GLGPDAHVDGRHRRWTAADLARLERMCALTATGLPPAEAARLARSEERPTAAGPRNTDA FT ARRAPTGRRSRAGSGLQLGDVRQECRGIARAALRLDASALDELLLAAIAEHGLVAAWTE FT VIVPTLQAVGRKWETSGEKYVEVEHFLSWHVSGALRRAAPPAVEDRPGSTTVLACVPGE FT NHTLPLEVLSAALTERGVPVRMFGGALPVESLVAAVRRTGPAAVGLWSQSRTTASRPLA FT QHVAAMEWGVRGARRRPVVLTLGPGWAGQAVAGLARPSGLAEAVAALEPSVYP" FT RBS 184945..184950 FT CDS 184958..185566 FT /transl_table=11 FT /gene="SCO0194" FT /gene_synonym="SCJ12.06" FT /product="putative sigma factor" FT /note="SCJ12.06, possible sigma factor, len: 202 aa. FT Similar to many including: Rhodobacter sphaeroide TR:O33546 FT (EMBL; U11283) RpoE homologue (168 aa), fasta scores opt: FT 291 z-score: 373.4 E(): 1.9e-13 35.4% identity in 161 aa FT overlap and Streptomyces coelicolor TR:O54163 (EMBL; FT AL021411) putative sigma factor SC7H1.04 (200 aa), fasta FT scores opt: 255 z-score: 327.4 E(): 7.1e-11 33.7% identity FT in 184 aa overlap. Contains a PS01063 Sigma-70 factors ECF FT subfamily signature and a Pfam match to entry PF00776 FT Sigma70_ECF, Sigma-70 factor (ECF subfamily). Contains a FT possible helix-turn-helix motif between aa's 162..183." FT /db_xref="GOA:Q9RI52" FT /db_xref="InterPro:IPR007630" FT /db_xref="UniProtKB/TrEMBL:Q9RI52" FT /protein_id="CAB53418.1" FT /translation="MNTRTRPTTTPVPPVEETRYEEELAHGLVKADEDAFAAIYRRWGS FT LVHTLATRSLGDAHEAEDVTQQVFVGAWRGRHGFRPERGTLGAWLVGITRRKVVDALAA FT RTRRLSLVESAGQDITPARLVQPALDEVLDRVLLVEALSRLPQAQRDVLCMAFYEDLTQ FT AQIAERTGVPLGTVKSHARRGLHRLRTAVGPGAAHDTCV" FT misc_feature 185102..185308 FT /note="Pfam match to entry PF00776 Sigma70_ECF, Sigma-70 FT factor (ECF subfamily), score 47.10, E-value 3.8e-10" FT misc_feature 185138..185236 FT /note="PS01063 Sigma-70 factors ECF subfamily signature, FT info count = 32.1" FT RBS 185660..185664 FT CDS 185675..186361 FT /transl_table=11 FT /gene="SCO0195" FT /gene_synonym="SCJ12.07" FT /product="putative lipoprotein" FT /note="SCJ12.07, possible lipoprotein, len: 228 aa. FT Contains an N-terminal signal sequence and a PS00013 FT Prokaryotic membrane lipoprotein lipid attachment site." FT /db_xref="UniProtKB/TrEMBL:Q9RI51" FT /protein_id="CAB53419.1" FT /translation="MMSRTTIAVAGSAGACALAPTAPAATAAPEQAQDTGLVSVFHGIP FT GTTVDVFANGDEPLGDFQPGTVTEGGNTTVAAHLSADGKPRLTTFTDDVSKTDAGRSRL FT TVRHVAAAPAVDVRAGGHPLFTGLANPDEDTALVEAGIVNADVVLAGTETVVVGPAGLD FT LKEGTTNVVYAWGSAEDQTLALPGQAFGGMDSTPLAVHPGAGGTAATPNASDRWRARAA FT TPARSR" FT misc_feature 185690..185722 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT RBS 186472..186477 FT CDS 186483..186887 FT /transl_table=11 FT /gene="SCO0196" FT /gene_synonym="SCJ12.08" FT /product="hypothetical protein SCJ12.08" FT /note="SCJ12.08, unknown, len:134 aa. Shares a low level of FT similarity with Mycobacterium tuberculosis TR:O53597 (EMBL; FT AL021426) hypothetical 24.0 KD protein MTV028.10C (224 aa), FT fasta scores opt: 119 z-score: 159.2 E(): 0.1 32.8% FT identity in 116 aa overlap." FT /db_xref="UniProtKB/TrEMBL:Q9RI50" FT /protein_id="CAB53420.1" FT /translation="MGHVHPSHLVELALGHASGEADVGALRHAASCPRCREELLRLTRV FT VTAARGAEASDLPVPPPERVWQRIALEVLPETDRVPRLRESSAHGSADERVRGSQRRWT FT DHAGEGLLGLALAIAVLLLRRWRIRAGSGN" FT CDS complement(187019..187459) FT /transl_table=11 FT /gene="SCO0197" FT /gene_synonym="SCJ12.09c" FT /product="conserved hypothetical protein" FT /note="SCJ12.09c, hypothetical protein, len: 146 aa. Some FT similarity to Mycobacterium tuberculosis TR:O53625 (EMBL; FT AL021428) hypothetical 16.6 KD protein (152 aa), fasta FT scores opt: 291 z-score: 377.8 E(): 1.1e-13 42.9% identity FT in 133 aa overlap. Also similar to TR:Q9RI34 FT (EMBL:AL109989) S. coelicolor SCJ12.26 (137 aa), fasta FT scores: opt: 524 z-score: 568.0 E(): 2.2e-26 62.2% identity FT in 135 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q9RI49" FT /protein_id="CAB53421.1" FT /translation="MYRNDGFRELNRQESLQRLANAPVGRIVHTRDALPAVLPVNFVLE FT KSGAVLLRTSASSELVRAVDGAVVAFEADEVDAVTHSGWSVVVTGLASVVTDPGEHEQL FT VRTGPRSWVPWPVEVFVRIAPDLVSGRELVGGRTLYGLDPPT" FT CDS complement(187992..188858) FT /transl_table=11 FT /gene="SCO0198" FT /gene_synonym="SCJ12.10c" FT /product="conserved hypothetical protein SCJ12.10c" FT /note="SCJ12.10c, unknown, len: 288 aa. Similar to several FT hypothetical proteins including: Mycobacterium tuberculosis FT SW:YW12_MYCTU (EMBL; Z74025) hypothetical 30.9 KD protein FT MTCY39.12 (295 aa), fasta scores opt: 363 z-score: 441.0 FT E(): 3.3e-17 32.3% identity in 288 aa overlap and FT Mycobacterium tuberculosis TR:O06189 (EMBL; Z95387) FT hypothetical 31.7 KD protein MTCY1A10.09C (297 aa), fasta FT scores opt: 336 z-score: 408.6 E(): 2.1e-15 29.3% identity FT in 294 aa overlap. Also highly similar to S. coelicolor FT hypothetical proteins (AL109962) SCJ1.29c (283 aa), fasta FT scores opt: 1161 z-score: 1097.2 E(): 0 63.5% identity in FT 288 aa overlap and SCJ1.16c (294 aa), fasta scores opt:892 FT z-score: 844.7 E():0 50.3% identity in 296 aa overlap" FT /db_xref="GOA:Q9RI48" FT /db_xref="InterPro:IPR006016" FT /db_xref="UniProtKB/TrEMBL:Q9RI48" FT /protein_id="CAB53422.1" FT /translation="MYLPMVVGVDGSESSLGAVDWAADEAALHEVPLRIVHAYRWDRYE FT GASLARELGKPSGHVTTDDILAVATRRARRHHPDLAVTTEATAEEPEYVLLREARNASA FT VILGTRGRGELAGLLLGSVSLTVATMSDCPVVVTRGDHDDRAAGGGRRGRIVVGVADAP FT TAAVRFACEEARRRGAALDAVRAWRCPTHDTVDHPLLAGTPERLHEERAAKELEAALAD FT APADVRLRRRTAEGPGSRVLSAASHEADLLVVGRRRPGQFGHRLGRVAHTLLHHSACPV FT AVVPDTT" FT CDS complement(188864..189886) FT /transl_table=11 FT /gene="SCO0199" FT /gene_synonym="SCJ12.11c" FT /product="putative alcohol dehydrogenase" FT /note="SCJ12.11c, probable alcohol dehydrogenase, len: 340 FT aa. Highly similar to many e.g. Bacillus stearothermophilus FT SW:ADH3_BACST (EMBL; Z27089) alcohol dehydrogenase (EC FT 1.1.1.1) (ADH-HT) (339 aa), fasta scores opt: 1281 z-score: FT 1383.7 E(): 0 55.2% identity in 337 aa overlap. Contains a FT PS00059 Zinc-containing alcohol dehydrogenases signature FT and a Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases." FT /db_xref="GOA:Q9RI47" FT /db_xref="HSSP:1H2B" FT /db_xref="InterPro:IPR013154" FT /db_xref="UniProtKB/TrEMBL:Q9RI47" FT /protein_id="CAB53423.1" FT /translation="MKAAVVREFGKPLVIEDRPDPEPGPGQVLVAVEASGLCHTDIHAA FT HGDWPVKPTPPFVPGHEGVGLVEKLGDGVTHLAVGQRVAVPWLGKACGRCEHCRSGWET FT LCEDQVNTGYGCDGGYAEKMLAWADFAQPVPEGVSALDAAPLTCAGVTTYKALKVAEVG FT PAQLVAVSGVGGLGHLAVQYAKIAGARVVAIDVTDDKLQLARELGADLVIDARTQDVGA FT ELKRHGGAHAALALAVNPAAFQAVNSGLRRGGKLVMVALPAHGTLQVPIFDTVLNGTSV FT IGSIVGTRQDLAEVFQLHAEGRTKVIRETRPLAAVNDCIDEVLGGQVKARIVFDLNAGG FT " FT RBS complement(188868..188872) FT misc_feature complement(188882..189880) FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score 359.60, E-value 3.2e-104" FT misc_feature complement(189665..189709) FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature." FT RBS complement(189894..189899) FT CDS complement(189925..190830) FT /transl_table=11 FT /gene="SCO0200" FT /gene_synonym="SCJ12.12c" FT /product="conserved hypothetical protein SCJ12.12c" FT /note="SCJ12.12c, unknown, len: 301 aa. Similar to several FT hypothetical proteins including: Mycobacterium tuberculosis FT SW:YW23_MYCTU (EMBL; Z74025) hypothetical 33.9 KD protein FT MTCY39.23C (317 aa), fasta scores opt: 380 z-score: 447.3 FT E(): 1.5e-17 33.5% identity in 316 aa overlap and S. FT coelicolor (EMBL;AL109962) SCJ1.30c (328 aa)fasta scores FT opt: 1274 z-score: 1163.7 E():0 65.3% identity in 300 aa FT overlap. Contains 2x Pfam match to entry PF00582 Usp, FT Universal stress protein family." FT /db_xref="GOA:Q9RI46" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q9RI46" FT /protein_id="CAB53424.1" FT /translation="MARTITVGLDGSPESRAAAEWAAREGTLRRVPVRLLHVWQPVPEP FT MAQAPLLGAETHQHWTERIPRDTAEGLRLRHPGVEVTTEQATGNPADALLAGTLDAELL FT VLGSRALSGLTGFLVGSVGQSVIARTETPVILVRAGEQAADEHLKDPTGIPSAATGFRP FT VVVGLDTGSPDEAVLSFAFEEARRRRAPLTAVRAWNLPSSYTYSIAAGFDPREELARAQ FT AEALGEALLPWREKYPDVEVTETCRLGSPAEHLIDAARDASLVVVGRRIRRSPFGVHIG FT AVAHAVMHHATTPVAVVAHD" FT misc_feature complement(189937..190254) FT /note="Pfam match to entry PF00582 Usp, Universal stress FT protein family, score 47.30, E-value 3.4e-10" FT misc_feature complement(190420..190731) FT /note="Pfam match to entry PF00582 Usp, Universal stress FT protein family, score 27.00, E-value 0.00011" FT CDS complement(190983..191654) FT /transl_table=11 FT /gene="SCO0201" FT /gene_synonym="SCJ12.13c" FT /product=" putative integral membrane protein SCJ12.13c" FT /note="SCJ12.13c, possible integral membrane protein, len: FT 223 aa. Contains potential membrane spanning hydrophobic FT domains." FT /db_xref="InterPro:IPR011637" FT /db_xref="UniProtKB/TrEMBL:Q9RI45" FT /protein_id="CAB53425.1" FT /translation="MSGTNRILSEGVTVMAMHQSTHRGSGFHLPSSRRNGAVSVPGAAD FT SVEAGALTARAFVFASARVLMGFVFLWAFLDKTFGFGYATASGKGWIDGGSPTEGFLGH FT VAVGPMESTFHSWAGAAWADWLFMLGLLGVGLALTAGVALRPAAVAGTVMMALMWAAEW FT PPAKHLSDGSASMSTNPFADYHVLYAVLLIALAAVSAGDALGLGRLWARLPIVRDHAWL FT R" FT CDS 191919..192848 FT /transl_table=11 FT /gene="SCO0202" FT /gene_synonym="SCJ12.14" FT /product="conserved hypothetical protein SCJ12.14" FT /note="SCJ12.14, unknown, len: 309 aa. Similar to FT Mycobacterium tuberculosis TR:P95195 (EMBL; Z83867) FT hypothetical 36.0 KD protein MTCY03A2.27C (332 aa), fasta FT scores opt: 331 z-score: 377.3 E(): 1.2e-13 28.1% identity FT in 310 aa overlap and S. coelicolor SCJ12.27c (335 aa), FT fasta scores opt: 780 z-score: 721.8 E(): 5.9e-35 45.8% FT identity in 308 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q9RI44" FT /protein_id="CAB53426.1" FT /translation="MAAPSLRTTQPWRFRLDTDSRTVHIHAAADRARRHTDQVGRASHL FT SEGCAVLNLRVVAVHFGREPVTRPLPCPDRPALLATVRLAESVRDAPETGLYETVWRRH FT SSRSPLSGRPLPSDLLTELIEAAHLGGATMRFSGRHDTERELCATWEVEWRNRADTDRS FT AQSRRLVSGPHSPSLGLPSAALGPQDALDPLPIRNLGAHRHPEVLPARAFEPRPLLALP FT SAAHDRRTDWPRAGQALDRVLLLATRRAVRASLLHQAMEWPDLRRALDGLPVDGPRGHT FT QMVLRLGYGPRGPASPRRPVEETTADHK" FT CDS complement(192880..194637) FT /transl_table=11 FT /gene="SCO0203" FT /gene_synonym="SCJ12.15c" FT /product="putative two-component sensor" FT /note="SCJ12.15c, probable two-component sensor. len: 585 FT aa. Similarity to Streptomyces coelicolor TR:Q9ZBY4 (EMBL; FT AL034355) putative two component sensor SCD78.15 (560 aa), FT fasta scores opt: 1439 z-score: 1571.0 E(): 0 44.7% FT identity in 553 aa overlap. Also some similarity to FT Pseudomonas aeruginosa TR:O54040 (EMBL; Y15252) FT nitrate/nitrite sensory protein NarX (622 aa), fasta scores FT opt: 315 z-score: 344.5 E(): 7.9e-1 29.0% identity in 297 FT aa overlap. Contains 2x Pfam match to entry PF01590 GAF and FT potential membrane spanning hydrophobic domains. Probable FT coiled-coil from 17 to 48 (32 residues)." FT /db_xref="GOA:Q9RI43" FT /db_xref="InterPro:IPR003018" FT /db_xref="UniProtKB/TrEMBL:Q9RI43" FT /protein_id="CAB53427.1" FT /translation="MENAEETREARVRLPQLRLDELLEELQARLDAARGTRDRVHSLLE FT AVLSVGRELDLEQALRSIVEAAAALVDAEYAALGVIGPDGKRLSAFHTVGVDAQQIARI FT GPYPEGHGILGELIRHPEPLRLAKLSDHPASYGFPAHHPPMNTFLGVPIRVRDHVFGNL FT YLTEKRGGQQFDEDDESVLATLAVAAGVAIDNARLYEESRLRERWLQVNAEITHTLMSG FT ADQGGVLPLIAERAREITGSALSVVATPVSGTDTLAVELAVGHEADAWRGIVLPVEGTL FT IGQAFVQRAPVHSADVCRDSRVSAGPPRFEGLGPGVAVPIGSSAEARGVVLLVRQSGGQ FT EFSEEETEPLLVFAAQAAVAMELAERRADAEQIALLEDRDRIARDLHDLAIQRLFATGM FT TLQSAGRRVQDPMASERILRAVDDLDETIKIIRSTIFGLRSRDDDAVPGLRSRAVRAVG FT EAAPLLGFAPSVRMEGLLDTHVPARTADHVMAVLTESLTNVARHARADRADVVLETDGK FT QVRLTVTDNGVGIPDGGRRSGLTNMAERAQKLGGGMDLESPGGKGTRLVWHAPLADSPD FT RAEGGRSAR" FT misc_feature complement(193540..193968) FT /note="Pfam match to entry PF01590 GAF, , score 40.30, FT E-value 4.3e-08" FT misc_feature complement(194044..194475) FT /note="Pfam match to entry PF01590 GAF, , score 93.20, FT E-value 5.3e-24" FT RBS complement(194644..194649) FT CDS complement(194760..195461) FT /transl_table=11 FT /gene="SCO0204" FT /gene_synonym="SCJ12.16c" FT /product="putative luxR family two-component response FT regulator" FT /note="SCJ12.16c, probable luxR family two-component FT response regulator, len: 233 aa. Highly similar to many FT including: several Streptomyces coelicolor two-component FT response regulators such as SW:CAB46941 (EMBL; AL096822) FT putative response regulator SCGD3.19 (218 aa), fasta scores FT opt: 865 z-score: 987.7 E(): 0 64.7% identity in 215 aa FT overlap. In addition to Pseudomonas aeruginosa TR:O54039 FT (EMBL; Y15252) nitrate/nitrite regulatory protein NarL (216 FT aa), fasta scores opt: 458 z-score: 528.5 E(): 4.4e-22 FT 38.6% identity in 210 aa overlap. Contains a Pfam match to FT entry PF00196 GerE, Bacterial regulatory proteins, luxR FT family, Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain and a PS00622 Bacterial FT regulatory proteins, luxR family signature. Contains a FT possible helix-turn-helix motif between aa's 182..203." FT /db_xref="GOA:Q9RI42" FT /db_xref="HSSP:1A04" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q9RI42" FT /protein_id="CAB53428.1" FT /translation="MAHSEQGDNTGSPVRVFLLDDHEVVRRGVHDLLDDEPDITVVGEA FT ATVEQALVRVPALRPDVAVLDVRLPDGDGVTVCRELRSQMPDLACLMLTSFDDEEALLD FT SIMAGAAGYVLKQIQGSDLVSAVRTVARGQSLLDASATTKLMARLRGGGQQPVEEPEML FT PGLTDREREILELIGEGLTNRQIGQRLYLAEKTVKNHISRLLAKLGVERRIQAAVIATQ FT ARDRMRTEGQN" FT misc_feature complement(194778..194975) FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 71.90, E-value FT 1.3e-17" FT misc_feature complement(194841..194924) FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature." FT misc_feature complement(195081..195422) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 110.90, E-value 2.5e-29" FT RBS complement(195468..195473) FT CDS complement(195554..196280) FT /pseudo FT /transl_table=11 FT /gene="SCO0205" FT /gene_synonym="SCJ12.17c" FT /product="putative pyruvate formate-lyase activating enzyme FT (pseudogene)" FT /note="SCJ12.17c possible pyruvate formate-lyase activating FT enzyme pseudogene. Similar to many e.g. Escherichia coli FT SW:PFLA_ECOLI (EMBL; X08035) pyruvate formate-lyase 1 FT activating enzyme (EC 1.97.1.4) (245 aa)." FT CDS complement(196306..196443) FT /pseudo FT /transl_table=11 FT /gene="SCO0206" FT /gene_synonym="SCJ12.18c" FT /product="putative acetyltransferase (pseudogene)" FT /note="SCJ12.18c, possible acetyltransferase pseudogene, FT len: 46 aa. Highly similar to several acetyltransferases FT (over limited sequence) e.g. Escherichia coli SW:TDCE_ECOLI FT (EMBL; U18997) keto-acid formate acetyltransferase (EC FT 2.3.1.-) (keto-acid formate-lyase) (746 aa), fasta scores FT opt: 161 z-score: 250.4 E(): 1.3e-06 71.9% identity in 32 FT aa overlap" FT CDS complement(196386..196991) FT /transl_table=11 FT /gene="SCO0207" FT /gene_synonym="SCJ12.19c" FT /product="conserved hypothetical protein" FT /note="SCJ12.19c, unknown, len: 201 aa. Weakly similar to FT many hypotheticals e.g. Thermus aquaticus SW:YQA3_THEAQ FT (EMBL; D87664) hypothetical 14.6 KD protein in QAH/OAS FT sulfhydrylase 3'region (137 aa), fasta scores opt: 172 FT z-score: 213.8 E(): 0.00015 35.9% identity in 142 aa FT overlap. Also similar to the N-terminal region of TR:Q9RI46 FT (EMBL:AL109989) Streptomyces coelicolor hypothetical FT protein SCJ12.12c, 301 aa; fasta scores: opt: 466 Z-score: FT 532.5 E(): 5e-22; 42.500% identity in 200 aa overlap" FT /db_xref="GOA:Q9RI41" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q9RI41" FT /protein_id="CAB53431.1" FT /translation="MEYDIAVGIDRSPASLAAAHWAAHEARRRGSGITLVHVWHRRARP FT TPYLRVGGTERAWAERTLEEAVRSVRSAHPGLRITERLVCDATVTALVTAADDAEMLVL FT GSPGPGPVGGFVTGSVSQRVVARADHPVVLVRAGRSAADEHLPAADGLAPEEIPETPYR FT DVVLGLRVDRPCDEVLDFAFEAARRRGSGPTCPRAAST" FT RBS 197206..197211 FT CDS 197221..199917 FT /transl_table=11 FT /gene="SCO0208" FT /gene_synonym="SCJ12.20" FT /product="pyruvate phosphate dikinase" FT /note="SCJ12.20, pyruvate phosphate dikinase, len: 898 aa. FT Highly similar to many pyruvate phosphate dikinases e.g. FT Clostridium symbiosum SW:PODK_CLOSY (EMBL; M60920)(EC FT 2.7.9.1) (873 aa), fasta scores opt: 1626 z-score: 1761.3 FT E():0 48.7% identity in 895 aa overlap and Microbispora FT rosea SW:BAA76347 (EMBL; AB025020) (878 aa), fasta scores FT opt: 3060 z-score: 3317.5 E(): 0 67.5% identity in 898 aa FT overlap. Contains a PS00370 PEP-utilizing enzymes FT phosphorylation site signature, Pfam match to entry PF01326 FT PPDK_N_term, Pyruvate phosphate dikinase, PEP/pyruvate FT binding domain and a Pfam match to entry PF00391 FT PEP-utilizers, PEP-utilizing enzymes" FT /db_xref="GOA:Q9RI40" FT /db_xref="HSSP:1KBL" FT /db_xref="InterPro:IPR002192" FT /db_xref="UniProtKB/TrEMBL:Q9RI40" FT /protein_id="CAB53432.1" FT /translation="MARYVYDFTEGGRDMAGLLGGKGSNLAEMTRLGLPVPPGFTLTTE FT ACRSVLDTGGEPPGLWEEVAGHLTDLETGSGRLLGQPDNPLLLSVRSGARFSMPGMMET FT ILDIGLDDDSVHGLAKVSGNERFAWDSYRRLVQMFGTTVMGVDPSLFERALAQLKEVRG FT VPDDVHLDAEDLARLVETYKNVIHQETGERFPQSPVEQLRRAVLAVFASWNGERARLYR FT RREHIADDLGTAVNVQRMVFGNLGSDSGSGVAFTRDPATGARGLYGDYLPNAQGEDVVA FT GIRNTVPLTELKRLDPGAYGRLRAHMETLERHYRDLCDIEFTIERGTLWMLQTRVGKRT FT AEAAFVLGADLADEGLITADEGLARVSGEGLARLMFPRFDTAVTGDVLARGVPASPGAA FT VGAAVFDSAEAVRRAADGERVVLVRQETTPDDLPGMIAAQAVLTSRGGKTSHAAVVARG FT MGKVCVCGADELTVDTGARRCTAPDGTIVEEGTVLSVDGTAGTVYAGAVPLVDSAVMRY FT LEAGAGGRATTGVVDAVARALARADAVRRLEVRANADTPQDAVRARRFGAQGIGLCRTE FT HMFLGERRKLVEEMILAGTDAGRERALAALLPLQREDFTGILEAMDGLPVTIRLLDPPL FT HEFLPDRADLAVRIATAEARGEEPDAHDAELLAAVGRMHEENPMLGLRGVRLGLVVPGL FT VAMQVRALGEAVAQRLTAGGAPRAEIMVPLVGDVRELRLVREEVERVLAEVSDTSGVPV FT TCPVGTMIELPRAALTAGRIAEDAEFFSFGTNDLTQTTWGFSRDDVEAEFFSAYLDRGV FT FPVSPFETLDRDGVGRLVGIAVEEGRATRPDLTIGVCGEHGGDPDSVHFFHSAGLDYVS FT CSPFRVPVARLEAGRAALDLADAGDSR" FT misc_feature 197263..198312 FT /note="Pfam match to entry PF01326 PPDK_N_term, Pyruvate FT phosphate dikinase, PEP/pyruvate binding domain, score FT 389.00, E-value 4.7e-113" FT misc_feature 198481..199773 FT /note="Pfam match to entry PF00391 PEP-utilizers, FT PEP-utilizing enzymes, score 372.90, E-value 3.2e-108" FT misc_feature 198556..198591 FT /note="PS00370 PEP-utilizing enzymes phosphorylation site FT signature." FT RBS 200011..200015 FT CDS 200024..200428 FT /transl_table=11 FT /gene="SCO0209" FT /gene_synonym="SCJ12.21" FT /product="hypothetical protein SCJ12.21" FT /note="SCJ12.21, unknown, len: 134 aa." FT /db_xref="UniProtKB/TrEMBL:Q9RI39" FT /protein_id="CAB53433.1" FT /translation="MAAKDIGARGLGATVRVRAESDVDEGSLAHLRASLAHLRKKVAAV FT LDRPGLPPASGEVRVVRAAAHHVELPWSAGAEIRLGNHLVIVHAREASARELADRLADR FT LRGNTDRVTHRGDATPKAATPPPWRGGPGR" FT misc_feature 200728..200883 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 40.30, E-value 4.3e-08" FT CDS 200728..201369 FT /transl_table=11 FT /gene="SCO0210" FT /gene_synonym="SCJ12.22" FT /product="hypothetical protein" FT /note="SCJ12.22, hypothetical protein, len: 213 aa. Similar FT in parts to several hypotheticals e.g. Methanopyrus FT kandleri SW:IMDH_METKA (EMBL; U31567) OrfX (fragment) (172 FT aa), fasta scores opt: 251 z-score: 300.4 E(): 2.3e-09 FT 34.5% identity in 116 aa overlap. Also similar to S. FT coelicolor conserved hypothetical proteins (AL109962) FT SCJ1.19c (223 aa), fasta scores opt: 411 z-score: 396.5 FT E(): 7.9e-17 47.3% identity in 201 aa overlap and SCJ1.18 FT (217 aa), fasta scores opt: 371 z-score: 359.1 E(): FT 9.5e-15 44.4% identity in 196 aa overlap. Contains 2x Pfam FT matches to entry PF00571 CBS, CBS domains." FT /db_xref="GOA:Q9RI38" FT /db_xref="InterPro:IPR007055" FT /db_xref="UniProtKB/TrEMBL:Q9RI38" FT /protein_id="CAB53434.1" FT /translation="MSRNVVRAGRTTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGT FT DLVRAQAHRAGRRPARAVTAADVMSSPAITVHPEQTVPDAARLMERRGVERLPVVDEED FT RLIGIATRRDLLRVFLRTDDDIRDQVTAEVVVGGLGLRSGAVRVLVRDGVVTLDGRVER FT RSQVPEAVHATWRLEGVVGVVNALTARVDDCAPPSGHEPRARLRRSAADP" FT misc_feature 200926..201087 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 64.90, E-value 1.7e-15" FT CDS 201374..202090 FT /transl_table=11 FT /gene="SCO0211" FT /gene_synonym="SCJ12.23" FT /product="conserved hypothetical protein SCJ12.23" FT /note="SCJ12.23, unknown, len: 238 aa. Weakly similar, in FT parts, to many putative two component sensor kinases e.g. FT E. coli SW:NARQ_ECOLI (EMBL; M94724) nitrate/nitrite sensor FT protein NarQ (EC 2.7.3.-) (566 aa), fasta scores opt: 424 FT z-score: 475.7 E(): 3.9e-19 39.5% identity in 238 aa FT overlap and Streptomyces coelicolor TR:Q9ZBY4 (EMBL; FT AL034355) putative two component sensor SCD78.15 (560 aa), FT fasta scores opt: 424 z-score: 475.7 E(): 3.9e-19 39.5% FT identity in 238 aa overlap" FT /db_xref="GOA:Q9RI37" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:Q9RI37" FT /protein_id="CAB53435.1" FT /translation="MRGARARGQRAGGHRLPVGGRRPDHRVRRPGGAGSARDGIARDVH FT DLVIQRLFAGALSPQPALGRVTGRPKASERIQRVVADLDDTIKVIRSTIHALRESDRQT FT GTALRSRLVGVTDRAAEVLGFAPALRMTDLLDTAVPAEHGAHLLAVLEEARSNAARHAR FT ASAVDVGVDVAGAVTRLRVADNGRGIAPRMTRRSGLANLRGRAEALGGTLDLSAEEGGG FT TLARWTVPLPASAAAG" FT CDS complement(202370..202843) FT /transl_table=11 FT /gene="SCO0212" FT /gene_synonym="SCJ12.24c" FT /product="hypothetical protein SCJ12.24c" FT /note="SCJ12.24c, unknown, len: 157 aa." FT /db_xref="InterPro:IPR012312" FT /db_xref="UniProtKB/TrEMBL:Q9RI36" FT /protein_id="CAB53436.1" FT /translation="MCEYCGCQSLAAIDGLTREHDAVVDLIGRVRDAHRDGRVTAMAEL FT AREIGAVLAPHTEVEEGGLFPAMALEFPEQIAALEDEHRRIEAVLYEANGPFLNDPTWP FT RRLIDALGLLREHILKEQDGVFPAALAFLDPEHWEVVEEVRARVGSALPRSLP" FT CDS complement(202863..204101) FT /transl_table=11 FT /gene="SCO0213" FT /gene_synonym="SCJ12.25c" FT /product="putative nitrate/nitrite transporter protein" FT /note="SCJ12.25c, possible nitrate/nitrite transporter FT protein, len: 412 aa. Similar to Bacillus subtilis FT SW:NARK_BACSU (EMBL; Z49884) nitrite extrusion protein (395 FT aa), fasta scores opt: 834 z-score: 877.9 E():0 36.8% FT identity in 378 aa overlap. Contains multiple possible FT membrane spanning hydrophobic domains." FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q9RI35" FT /protein_id="CAB53437.1" FT /translation="MLQPSTQHSEITSQSVPGRAWLMLALATLGFALNFWAWALLSPLG FT PRFKDSLDLSSFQQSLLVAVPVVVGSLGRIPVGALTDRFGGRVMFPLVSAATIVPVLYL FT GLAGHSSLTALLVGGFLLGIGGTAFAVGVPFTSAWFPPERRGLAIGIFGAGMGGTAISA FT LTTVKLVDAYGMANPFLVTAAVLAVYAVVAALLLRDAPGRTVPAESLGHRMAATCKLGI FT TWQASALYAVAFGGYVAFSVYLPTYLKTGYGLTQADAANRMAGFVLLAVAMRPMGGWLS FT DRLGPVKVLAGSLAVVLAGALAQSPTPALMPVGTIAFLAMAAALGAGSGAVFALVAFLS FT PANKVGSVTGMVGAAGGLGGFLPPLVMGTLYGSFGSYAIGLILLAAVAAAALAFTGTGL FT SHAVSRRATAHSH" FT RBS complement(204112..204117) FT CDS 204387..204800 FT /transl_table=11 FT /gene="SCO0214" FT /gene_synonym="SCJ12.26" FT /product="conserved hypothetical protein" FT /note="SCJ12.26, hypothetical protein, len: 137 aa. Some FT similarity to several hypotheticals e.g. Mycobacterium FT tuberculosis TR:O53625 (EMBL; AL021428) hypothetical 16.6 FT KD protein (152 aa), fasta scores opt: 291 z-score: 372.0 FT E(): 2.3e-13 46.5% identity in 129 aa overlap. Also similar FT to TR:Q9RI49 (EMBL:AL109989) S. coelicolor SCJ12.09c (146 FT aa), fasta scores opt: 524 z-score: 550.7 E(): 2e-25 62.2% FT identity in 135 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q9RI34" FT /protein_id="CAB53438.1" FT /translation="MSSEDGFRALERAECLRLLGSAPVGRIVYTREALPAVLPVNFSLD FT TDASVVLRTSAGSDLVRAVDGAVVAFEADAFDAHDRSGWSVVVTGRATVVTDPAARARL FT AENGPRSWVVSRDGLYVRIESEMVTGREIAGVG" FT CDS complement(204881..205888) FT /transl_table=11 FT /gene="SCO0215" FT /gene_synonym="SCJ12.27c" FT /product="conserved hypothetical protein SCJ12.27c" FT /note="SCJ12.27c, unknown, len: 335 aa. Similar to several FT hypotheticals e.g. Mycobacterium tuberculosis TR:P95195 FT (EMBL; Z83867) hypothetical 36.0 KD protein (332 aa), fasta FT scores opt: 441 z-score: 491.9 E(): 4.9e-20 35.7% identity FT in 319 aa overlap and S. coelicolor (AL109962) hypothetical FT protein SCJ1.11 (330 aa), fasta scores opt: 816 z-score: FT 796.1 E():0 43.0% identity in 321 aa overlap and SCJ12.14 FT (309 aa), fasta scores opt: 780 z-score: 755.6 E(): 0 45.8% FT identity in 308 aa overlap." FT /db_xref="GOA:Q9RI33" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q9RI33" FT /protein_id="CAB53439.1" FT /translation="MSTYSPRVDAAALETVLDAAVAAPSIHNTQPWRFRVETATGLLQV FT RADRTRVLPLADPRRRAQYLSVGAAVLNLRVAAAHMGWEPVVRLLPDPHDADLLAEVRP FT TGSGGNPPDYRWLYPSVERRHTSRLPFTGRPVPEHVVAEMTAAAQSEGARLYVPDIVST FT WRLLEPIAVAETRNRTSSGRITETRHWLTAPGTVSPYGIPLTALGPQDLSGRIPMRDFS FT GPLPVPHPPARRFERHAQVALLWTAHDRPQDWLRAGQALERVLLTATARGVRTSMLHQA FT MEWPDLRAAARLPQQRCNPQILIRFGYGPEGGQAPRARVPEPDRPSARPRERET" FT RBS complement(205894..205899) FT CDS 206480..210181 FT /transl_table=11 FT /gene="SCO0216" FT /gene_synonym="narG2" FT /product="nitrate reductase alpha chain NarG2" FT /note="SCJ12.28, narG2, probable nitrate reductase alpha FT chain, len: 1233 aa. Highly similar to Streptomyces FT coelicolor TR:O86717 (EMBL; AL031515) putative nitrate FT reductase alpha chain NarG SC5C7.20c (1231 aa), fasta FT scores: opt: 5792 z-score: 6544.7 E(): 0 67.6% identity in FT 1230 aa overlap and Bacillus subtilis SW:NARG_BACSU (EMBL; FT Z49884) nitrate reductase alpha chain (EC 1.7.99.4) NarG FT (1228 aa), fasta scores: opt: 4331 z-score: 4891.8 E(): 0 FT 52.9% identity in 1201 aa overlap. Contains a PS00551 FT Prokaryotic molybdopterin oxidoreductases signature 1, a FT Pfam match to entry PF00384 molybdopterin, Prokaryotic FT molybdopterin oxidoreductases and a Pfam match to entry FT PF01568 Molydop_binding, Prokaryotic molybdopterin FT oxidoreductases." FT /db_xref="GOA:Q9RI32" FT /db_xref="HSSP:1R27" FT /db_xref="InterPro:IPR006468" FT /db_xref="UniProtKB/TrEMBL:Q9RI32" FT /protein_id="CAB53440.1" FT /translation="MENDQNARRGRPGVARDWPLAARRLLTRREVSADGRAVFGTGDDK FT WEGFYRDRWAHDKVVRSTHGVNCTGSCSWMVYVKDGIITWEHQATDYPSIGTDCPEYEP FT RGCPRGASFSWYTYSPSRVRYPYVRGALLKLWREARRRLGDPVAAWAEITSDPAKARAY FT KKARGRGGLVRAGWDEVSELIAAAQVHTVKAYGPDRVAGFSPIPAMSMASFAAGARYHS FT LIGGTLLSFYDWYADLPVASPQVFGDQTDVPEAADWWNAGYLIMWGSNIPVTRTPDAHF FT LTETRYNGTKAVAVSPDYADNVKHADEWLAPHPGTDGALAMAMGHVILREFLVEREVPY FT FQQYLRTFTDAPFLVSLREHADGGLVPDGFLTAADLGHEVENAGSKTVLLDSATGEPVV FT PGGSVGFRWAKEEQSRWNLDLGDVVPELSLLERAEDTVPIALPRFDEGATEGGGSMVRG FT VPVRRLGGRLVTTVFDLMLAQYGVGRPGLPGDWPSSYDDADRPHTPAWQETITSVPAEQ FT AARIAREFARNAERTGGRSMIALGAGTNHWFHSDTIYRAFLALTTMTGCQGVNGGGWAH FT YVGQEKVRPLTGQQHLSFAFDWQRPTRHMAGTSYWYLNSDQWRYEAFGPDELASPLGEG FT RFKGKAFADCLAQAVRLGWTPGHPGFNRNPLDLTDEARAAGRPVAEHIVDELKSGRLRF FT AAEDPDDPANFPRVLTVWRANLLGSSGKGNEYFLRHLLGTDAAVRSEETPPEGRPKDVV FT WREEAPEGKLDLLVTMDFRMTSTGLLSDVVLPAATWYEKDDLSSTDMHPFVHAFTPAIA FT PPWQARTDYDSFLTLADRFSELAAEHLGTRTDVLPVPLLHDTPDELAQPGGVVRDWKAG FT ECEPVPGRTMPKLAVVERDYAAIAQKMRAVGPLLDTLGTTTKGVTVHPDREIDDLRHRN FT GTVRDGLAAGRPSLATASDMCEAILALSGTTNGRLATEGFRELERQTGSEGLVELSAER FT EAERITFADTRTQPRSVITSYEWSGSETGGRRYSPFVINTEHKKPWHTLTGRQHFFVQH FT DWMTELGEQLPVYRPPLNSPRHYGDERLHEDGRAEVTVRYLTPHSKWSIHSNYQDNKYM FT LDLSRGGPTIWMSLQDAEKIGVKDNEWIEAYNRNGVVACRAVVTHRMPEGTVYMHHAQD FT RTVNVPKTEVGGKRGGIHNSLTRLLLKPTHLAGGYAQFTYAFNYYGPTGNQRDEVTVIR FT RRDQRVEY" FT misc_feature 206663..206719 FT /note="PS00551 Prokaryotic molybdopterin oxidoreductases FT signature 1" FT misc_feature 208772..208963 FT /note="Pfam match to entry PF00384 molybdopterin, FT Prokaryotic molybdopterin oxidoreductases, score 92.80, FT E-value 2.7e-29" FT misc_feature 209735..210100 FT /note="Pfam match to entry PF01568 Molydop_binding, FT Prokaryotic molybdopterin oxidoreductases, score 130.00, FT E-value 4.3e-35" FT CDS 210183..211751 FT /transl_table=11 FT /gene="SCO0217" FT /gene_synonym="narH2" FT /product="nitrate reductase beta chain NarH2" FT /note="SCJ12.29, narH2, probable nitrate reductase beta FT chain, len: 522 aa. Highly similar to many e.g. FT Streptomyces coelicolor TR:O86716 (EMBL; AL031515) putative FT nitrate reductase beta chain NarH SC5C7.19c (531 aa), fasta FT scores: opt: 2348 z-score: 2413.0 E(): opt: 2348 z-score: FT 2413.0 E(): 0 65.3% identity in 496 aa overlap and Bacillus FT subtilis SW:NARH_BACSU (EMBL; Z49884) nitrate reductase FT beta chain (EC 1.7.99.4) NarH (487 aa), fasta scores: opt: FT 2081 z-score: 2139.7 E(): 0 57.1% identity in 485 aa FT overlap. Contains a PS00190 Cytochrome c family FT heme-binding site signature, a Pfam match to entry PF00037 FT fer4, 4Fe-4S ferredoxins and related iron-sulfur cluster FT binding domains and a Pfam match to entry PF00037 fer4, FT 4Fe-4S ferredoxins and related iron-sulfur cluster binding FT domains." FT /db_xref="GOA:Q9RI31" FT /db_xref="HSSP:1R27" FT /db_xref="InterPro:IPR017896" FT /db_xref="UniProtKB/TrEMBL:Q9RI31" FT /protein_id="CAB53441.1" FT /translation="MSRDEATVGRVMAQVAMVMNLDKCIGCHTCSVTCKQTWTNRTGVE FT YAWFNNVETKPGVGYPRRYEDQDRWKGGWMLDRRGRLVLRSGGRVRRLLSLFSNPDLPS FT LEDYYEPVTYDYDNLVGAPAGPDMPVARPRSVLTGRPTSITWGANWEDGLGGAPENAGA FT DPNLSGEWAERVRFEFEQTFLFHLPRLCEHCLNPACVSACPSGAMYKRVEDGIVLVDQD FT KCRGWRMCVTACPYKKVYVNHATGKAEKCTFCFPRIEAGQPTVCSETCVGRLRYLGLLL FT YDADRVGEAAATPDEKDLLDAQRGVFLDPADPDVIAAARESGIPEDWLAAARRSPVYDL FT VARHKVALPLHPEYRTLPMVWYVPPLSPVLDAVDAAGGNQDDPDHVFAAVTRLRIPLEY FT LAELFTAGDTDVVGGVLMKLTALRSYMRARTLGEDGDEAALKAVGLTAREAEDLHRLLA FT VAKYEDRYVVPAAHREDAAALSGMEDRCPVETSGDPQPAGSGGRIMLGIPTLRRSSAAS FT TGDSA" FT misc_feature 210231..210284 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S ferredoxins FT and related iron-sulfur cluster binding domains., score FT 9.00, E-value 0.23" FT misc_feature 210252..210269 FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT misc_feature 210732..210908 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S ferredoxins FT and related iron-sulfur cluster binding domains., score FT 63.40, E-value 2.9e-17" FT CDS 211748..212551 FT /transl_table=11 FT /gene="SCO0218" FT /gene_synonym="narJ2" FT /product="putative nitrate reductase delta chain NarJ2" FT /note="SCJ12.30, narJ2, probable nitrate reductase delta FT chain, len: 267 aa. Similar to many e.g. Bacillus subtilis FT SW:NARJ_BACSU (EMBL:Z49884) nitrate reductase delta chain FT NarJ (EC 1.7.99.4) SC5C7.18c (184 aa), fasta scores: opt: FT 287 z-score: 314.9 E(): 3.5e-10 32.9% identity in 164 aa FT overlap and Streptomyces coelicolor TR:O86715 FT (EMBL:AL031515) nitrate reductase delta chain SC5C7.18c FT (164 aa), fasta scores: opt: 309 z-score: 338.8 E(): FT 1.6e-11 40.1% identity in 172 aa overlap." FT /db_xref="GOA:Q9RI30" FT /db_xref="InterPro:IPR003765" FT /db_xref="UniProtKB/TrEMBL:Q9RI30" FT /protein_id="CAB53442.1" FT /translation="MSPLPTTVPDIVRARVRAALRRPDGTARSGRAAASFGPREPETRA FT LLLRLLSLLLQYPDAALTAARPVLTATVEALPPSPATEHLSTFTTWFTGQEPDALEQHY FT VETFDLRRRSGLYLTYYLHGDTRRRGMALLTLAQRYRATGWDTDGGELPDHLPVVLEYA FT ALAGPRAGEAPLRLHRRGLELIHHALSDGGSPYRHVLAALLTLLPPATEADRAAVAELA FT AQGPPAEDVGLDPYGAGGFTPPGAFVPPEQAHPTLMPPLTPPEGP" FT CDS 212551..213321 FT /transl_table=11 FT /gene="SCO0219" FT /gene_synonym="narI2" FT /product="putative nitrate reductase delta chain NarI2" FT /note="SCJ12.31, narI2, possible nitrate reductase gamma FT chain, len: 256 aa. Similar to many including: Streptomyces FT coelicolor TR:O86714 (EMBL:AL031515) putative nitrate FT reductase gamma chain NarI SC5C7.17c (240 aa), fasta FT scores: opt: 755 z-score: 891.5 E(): 0 46.8% identity in FT 235 aa overlap and Bacillus subtilis SW:NARI_BACSU FT (EMBL:Z49884) nitrate reductase gamma chain (EC 1.7.99.4) FT (223 aa), fasta scores: opt: 668 z-score: 790.4 E(): 0 FT 43.6% identity in 225 aa overlap. Contains possible FT membrane spanning hydrophobic domains" FT /db_xref="GOA:Q9RI29" FT /db_xref="HSSP:1Q16" FT /db_xref="InterPro:IPR003816" FT /db_xref="UniProtKB/TrEMBL:Q9RI29" FT /protein_id="CAB53443.1" FT /translation="MSATPAAPAPLAAASGSVLLLWVAVPYICLAVFAVGHVWRYRQDQ FT FGWTSRTTQLLERRWLRWGSPLFHLGAFMVIAGHVVGLAVPASWTEAAGVDEHTYHTTA FT VWAGSVAGVAMVAGLGMLCARRLLTRRIRLGTDRSDKVLFPLLSATVLLGITATAAHNV FT FGAGYDYRSTVSVWFRGLFTLQPQPEAIAGAPMLFQLHALSACLLFAVWPFTRLVHVWS FT APVGYLVRPYVVYRRRAAAPGRTAGPARRDRHPV" FT CDS 213427..213870 FT /transl_table=11 FT /gene="SCO0220" FT /gene_synonym="SCJ12.32" FT /product="hypothetical protein SCJ12.32" FT /note="SCJ12.32, unknown, len: 147 aa." FT /db_xref="UniProtKB/TrEMBL:Q9RI28" FT /protein_id="CAB53444.1" FT /translation="MPSTTDSATVLTGMYAAEAEYLAAGGPGEASFDLLAPFFAPDVEL FT HQADALPYGGTWRGHQGMTQFFLMMGEAWESFDMVEQEFLATGETAVVLTQVRARARAT FT GRELSFPILQAITVKDGRITEVRPFYWDTRAIAEVCAVPTPTD" FT CDS complement(213895..>214553) FT /pseudo FT /codon_start=3 FT /transl_table=11 FT /gene="SCO0221" FT /gene_synonym="SCJ12.33c" FT /product="putative transposase (pseudogene)" FT /note="SCJ12.33c, putative transposase pseudogene. Similar FT to Streptomyces coelicolor SW:CAB45030 (EMBL:AL078635) FT putative transposase (fragment) (142 aa)" FT RBS complement(214431..214435) FT CDS 214913..215446 FT /transl_table=11 FT /gene="SCO0222" FT /gene_synonym="SCJ9A.01" FT /product="putative acetyltransferase" FT /note="SCJ9A.01, possible acetyltransferase, len: 177 aa; FT similar to many e.g. TR:Q53796 (EMBL:L26955) bleomycin FT acetyltransferase from Streptomyces verticillus (301 aa) FT fasta scores; opt: 150, z-score: 190.2, E(): 0.0031, (30.8% FT identity in 169 aa overlap). Also similar to TR:CAB44535 FT (EMBL:AL078618) putative acetyltransferase from FT Streptomyces coelicolor (187 aa) fasta scores; opt: 215, FT z-score: 271.9, E(): 8.8e-08, (34.2% identity in 146 aa FT overlap). Contains Pfam match to entry PF00583 FT Acetyltransf, Acetyltransferase (GNAT) family" FT /db_xref="GOA:Q9S1R9" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q9S1R9" FT /protein_id="CAB53262.1" FT /translation="MTEIRTPRLLLRSWHDDDLTPMADINADPRVMRWTDDGSVRDLDH FT TAEDIERWEEEWDEEGFGLFAVELLASGELIGFTGLSVPEFLPEVMPAVAISWRLGSPF FT WGQGYASEAAHATLEFALQDRGLDRVISISRMGDNASENVIRKLGMTPERETTHPVYGY FT PLRVHAIDLTEFQA" FT misc_feature 214943..215365 FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 23.40, E-value FT 0.0053." FT CDS 215443..215559 FT /transl_table=11 FT /gene="SCO0223" FT /gene_synonym="SCJ9A.02" FT /product="hypothetical protein" FT /note="SCJ9A.02, improbable CDS, function unknown, len: FT 38aa; predicted by Hidden Markov Model and amino acid FT usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1R8" FT /protein_id="CAB53263.1" FT /translation="MNPPSRRHHKAADRSPCVPERIDRGDTDTQERMAPPCH" FT CDS complement(215807..216844) FT /transl_table=11 FT /gene="SCO0224" FT /gene_synonym="SCJ9A.03c" FT /product="conserved hypothetical protein" FT /note="SCJ9A.03c, unknown, len: 345aa; similar to FT TR:CAB45045 (EMBL:AL078635) hypothetical protein from FT Amycolatopsis orientalis (353 aa) fasta scores; opt: 1018, FT z-score: 1095.3, E(): 0, (47.3% identity in 355 aa FT overlap)." FT /db_xref="UniProtKB/TrEMBL:Q9S1R7" FT /protein_id="CAB53264.1" FT /translation="MGTDGTLDEALERLYRTGPEFGGRLSNHGPMAVESMVRRGHARQV FT HRWLDLYMRRLDERPRGGCPIPAVGWRSALGDPRRLGDWLAFFDREVTEQPWRAVLEVW FT WPRLVPGIAAGATHGVIRTGHAVHALLAHEDGPRLAELGQALGYWAARWQQVPSAAPSG FT TSGPASALAGVPRIADQSADIDHRLGQLTGLSGWPAALAALRPAADAGQARDLLAGLTT FT AAAVRYLPNAHGSPVMLIHSATAPMAVLRTLPALPSTQWVVSLHAAWAASAAVTAAYAP FT AAPLPRHALPTAHRSAEETFALAVRHQDEHVIKLADTCLDVHRRTGCPDALAAVTRAIE FT LIDEP" FT CDS complement(216834..217268) FT /transl_table=11 FT /gene="SCO0225" FT /gene_synonym="SCJ9A.04c" FT /product="hypothetical protein" FT /note="SCJ9A.04c, unknown, len: 144aa; predicted by amino FT acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1R6" FT /protein_id="CAB53265.1" FT /translation="MTEKQSCLSDHLACVRDCGLVVTARTAAVPAITATVRAVTGGQVR FT GGVRVDSGDWCGLTVGEAGDQPSYLGEGHVSVPPATAADPGSHPGRSSVSRSGRTPSMR FT KPQVGRKSPAGVLGLAQGCVWVSGPMVLGRCVDSVGSYGD" FT CDS complement(217315..218019) FT /transl_table=11 FT /gene="SCO0226" FT /gene_synonym="SCJ9A.05c" FT /product="putative membrane protein" FT /note="SCJ9A.05c, possible membrane protein, len: 234aa; FT contains possible peripheral membrane hydrophobic region." FT /db_xref="UniProtKB/TrEMBL:Q9S1R5" FT /protein_id="CAB53266.1" FT /translation="MLFEKESPELNSPVHLSLSGRPAIAVLALVGITAGVLIGRESLRT FT VVGCGAPDDRFPSRTAADWKAGADHVVVTRPTAERETNREEVAMGAVRYTVDRAVTLRK FT ERVLWSAAAPRHELGSEFDMTAPGWSVYRNGKRVKGTAPEAPRLEIGHMYVLALRWEAD FT QWVVLGEGAAVPFDDRVAGRGEWCGMVLSEDDFAKGERFSRRDDHSLEETVQGQGEAAI FT SRELAKTGSKRP" FT CDS complement(218418..218780) FT /transl_table=11 FT /gene="SCO0227" FT /gene_synonym="SCJ9A.06c" FT /product="hypothetical protein" FT /note="SCJ9A.06c, unknown, len: 120aa; predicted by GC FT Frameplot and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1R4" FT /protein_id="CAB53267.1" FT /translation="MTRSAEPVEQGVESLGQRLRTAPLRQPGGGGTQMRQLLGRDAVQS FT DAEGGVRLVRGVVHGSQFDDQIAEEPGGEGAVQGESVMFVQVREQGEDPLVAAQHRLGP FT TGERCRQQASGEQAPG" FT CDS 218973..219059 FT /transl_table=11 FT /gene="SCO0228" FT /gene_synonym="SCJ9A.07" FT /product="hypothetical protein" FT /note="SCJ9A.07, unknown, len: 28aa; predicted by GC FT Frameplot and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1R3" FT /protein_id="CAB53268.1" FT /translation="MRNPVVTSPIVGVTKPTQPADAIAAVDV" FT CDS 219302..220150 FT /transl_table=11 FT /gene="SCO0229" FT /gene_synonym="SCJ9A.08" FT /product="putative oxidoreductase (putative secreted FT protein)" FT /note="SCJ9A.08, probable oxidoreductase (putative secreted FT protein), len: 282 aa; similar to many e.g. TR:CAB51136 FT (EMBL:Y18817) oxidoreductase of short chain from FT Streptomyces coelicolor (276 aa) fasta scores; opt: 615, FT z-score: 697.7, E(): 1.7e-31, (40.9% identity in 274 aa FT overlap). Contains Pfam match to entry PF00106 adh_short, FT short chain dehydrogenase and Prosite match to PS00061 FT Short-chain dehydrogenases/reductases family signature" FT /db_xref="GOA:Q9S1R2" FT /db_xref="HSSP:1FDS" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S1R2" FT /protein_id="CAB53269.1" FT /translation="MQRQNWLITGVSTGLGRAFAQAALSAGHTVVGTVRSENDVRAFEE FT LGPGHAHGRILDVTDGGAVNGVVAEVERSVGPLDVVVANAGYGLEGTFEETPLAEVRRQ FT FDVNVFGAMATLQAALPHMRARRRGHLMAVTSMGGLMAVPGMSAYCGSKFALEGILEAL FT GKEVAQFGIHVTAIEPGSFRTDWAGRSMTRAARTVADYDDLFAPIREARQKASGNQLGN FT PAKAGEAVVHITSVDQPPAHLVLGSDALRLVTAARTAVDEDIRAWEALSRTTDFPQGAQ FT L" FT misc_feature 219311..219856 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 179.90, E-value 4e-50" FT misc_feature 219707..219793 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 220150..220764 FT /transl_table=11 FT /gene="SCO0230" FT /gene_synonym="SCJ9A.09" FT /product="putative tetR-family transcriptional regulator" FT /note="SCJ9A.09, possible tetR-family transcriptional FT regulator, len: 204 aa; similar to many proposed regulators FT and hypothetical proteins e.g. TR:CAB46789 (EMBL:AL096811) FT putative tetR transcriptional regulator from Streptomyces FT coelicolor (251 aa) fasta scores; opt: 194, z-score: 252.1, FT E(): 1.1e-06, (35.3% identity in 102 aa overlap). Contains FT Pfam match to entry PF00440 tetR, Bacterial regulatory FT proteins, tetR family and Prosite match to PS01081 FT Bacterial regulatory proteins, tetR family signature. Also FT contains possible helix-turn-helix motif (+3.50 SD) 41-62 FT aa" FT /db_xref="GOA:Q9S1R1" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q9S1R1" FT /protein_id="CAB53270.1" FT /translation="MPGRPSPLGRRGIERKGDVRERAILDTCEALLADKGYDAMTVGDI FT AQGAGITRGALYFYFGSKHEVVAALVARTVEHLWERSRVTAQTDEPRQAIAAAMHRTVE FT LWNEHGLVMRTAIDLSLTVPEIGELWSHTADLFIAAITAVLERAGIQSGTAPEQASAMA FT RALCWMIERTFYHASQESREKLQEASATCEHIWLVSAGLIT" FT misc_feature 220219..220359 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 47.10, E-value FT 2.4e-11" FT misc_feature 220255..220347 FT /note="PS01081 Bacterial regulatory proteins, tetR family FT signature" FT CDS complement(221092..221247) FT /transl_table=11 FT /gene="SCO0231" FT /gene_synonym="SCJ9A.10c" FT /product="small hydrophobic hypothetical protein" FT /note="SCJ9A.10c, small hydrophobic protein, function FT unknown, len: 51 aa; predicted by GC Frameplot, Hidden FT Markov Model and amino acid usage. Contains possible FT hydrophobic membrane spanning regions " FT /db_xref="InterPro:IPR000630" FT /db_xref="UniProtKB/TrEMBL:Q9S1R0" FT /protein_id="CAB53271.1" FT /translation="MIILGLILLIIGLLVGMGLLTTIGGILILVGAILWILGATGRAVG FT GRKHFF" FT CDS complement(221414..221599) FT /transl_table=11 FT /gene="SCO0232" FT /gene_synonym="SCJ9A.11c" FT /product="hypothetical protein" FT /note="SCJ9A.11c, unknown, len: 61aa; predicted by GC FT Frameplot, Hidden Markov Model and amino acid usage. FT Similar to a region of several aldolases eg. TR:AAB40121 FT (EMBL:U70664) from Haloferax sp. (215 aa) fasta scores; FT opt: 140, z-score: 198.7, E(): 0.0011, (49.0% identity in FT 51 aa overlap)." FT /db_xref="GOA:Q9S1Q9" FT /db_xref="HSSP:1MXS" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q9" FT /protein_id="CAB53272.1" FT /translation="MRLRCSEGASWIVTPALTESVAASVRVGLPVPAGDLTPTEAVAAR FT RAGADAVKLFPASIGQ" FT CDS complement(221699..222538) FT /transl_table=11 FT /gene="SCO0233" FT /gene_synonym="SCJ9A.12c" FT /product="putative DNA-binding protein" FT /note="SCJ9A.12c, possible DNA-binding protein, len: 279 FT aa; N-terminal similar to TR:O86721 (EMBL:AL031515) FT hypothetical protein from Streptomyces coelicolor (272 aa) FT fasta scores; opt: 135, z-score: 165.1, E(): 0.079, (29.3% FT identity in 150 aa overlap). Contains possible FT helix-turn-helix motif (+3.31 SD) 37-58 aa" FT /db_xref="GOA:Q9S1Q8" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q8" FT /protein_id="CAB53273.1" FT /translation="MIDRSGLAQFLRHRREALQPEDVGLPRGRRRRTSGLRREEVAALC FT HMSTDYYARLERERGPQPSQQMIVSIAQGLHLSLDERDHLFRLAGHTPPPRGTDGEHIS FT PGLLRILDRLDDTPAEIVTELGETLRQTRLGIALTGDQTRYSGPARSIGYRWFTDPATR FT QLYHPDDHAFLTRMFASGLREVATLRGPGSRAAHYADLLLAQSEEFRRVWKEHTVGIRP FT KEVKHFVHPEVGALELTCQTLLDPSQAHMLLVYTATPGGESYEKLQLLSVIGAQTLR" FT CDS 222827..223288 FT /transl_table=11 FT /gene="SCO0234" FT /gene_synonym="SCJ9A.13" FT /product="putative oxidoreductase" FT /note="SCJ9A.13, probable oxidoreductase, len: 153aa; FT similar to many eg. SW:DHG_BACME glucose dehydrogenase from FT Bacillus megaterium (261 aa) fasta scores; opt: 252, FT z-score: 277.8, E(): 4.1e-08, (44.0% identity in 100 aa FT overlap). Contains Pfam match to entry PF00106 adh_short, FT short chain dehydrogenase" FT /db_xref="GOA:Q9S1Q7" FT /db_xref="HSSP:1YBV" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q7" FT /protein_id="CAB53274.1" FT /translation="MTDLRNKTALITGSDRGIGRVIALRYARLGAQVVVNGSRSEDAAL FT RTVEEIRTPGAEAVAVQGDVADLDAPENLFQQCIDTFGKPDIVVAHAGVEIVDQPISEV FT TTEQFDRLFARVLRRPARPPGQRPAPPHQRWRPGVTGGIPLRPTDSSGS" FT misc_feature 222845..223273 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 13.80, E-value 1.7e-06" FT CDS 223294..224232 FT /transl_table=11 FT /gene="SCO0235" FT /gene_synonym="SCJ9A.14" FT /product="putative oxidoreductase" FT /note="SCJ9A.14, possible oxidoreductase, len: 312 aa; FT similar to many proposed oxidoreductases e.g. TR:O53537 FT (EMBL:AL021925) putative oxidoreductase from Mycobacterium FT tuberculosis (317 aa) fasta scores; opt: 988, z-score: FT 1030.4, E(): 0, (52.6% identity in 304 aa overlap). Also FT similar to SCJ9A.19c five CDSs downstream (311 aa) fasta FT scores; opt: 433, z-score: 409.8, E(): 1.4e-17, (38.0% FT identity in 300 aa overlap). Contains Pfam match to entry FT PF00106 adh_short, short chain dehydrogenase" FT /db_xref="GOA:Q9S1Q6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q6" FT /protein_id="CAB53275.1" FT /translation="MPRRPIDITIPDLRDTRAVVTGASDGMGLGMAIRLASAGAQVVLP FT VRNPRKGEAALTKIRQHAPDADVSLRSLDLSSLASVAALGKTLLEEGQPIHLLLNNAGV FT MTPPERQATVDGFELQFGTNHLGHFALAAHLLPLLRAGQARVTSQVSIAANQHAINWDD FT LNWECSYNGRKAYSQSKIALGLFALELNRRSEAGGWGITSNLSHPGVAPTSLLAARPEV FT GRDKDTVLVRMIRAMSARGVIVGTVETAQLPALMAATSAAAKPGGFYGPSGPGHLGGPP FT GEQELYSRLRSADEAQRVWRTSEELTGTHLR" FT misc_feature 223339..223935 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 50.30, E-value 4.2e-11" FT CDS complement(224404..225276) FT /transl_table=11 FT /gene="SCO0236" FT /gene_synonym="SCJ9A.15c" FT /product="putative DNA-binding protein" FT /note="SCJ9A.15c, possible DNA-binding protein, len: 290 FT aa; prediction based on GC Frameplot, Hidden Markov Model FT and amino acid usage. Similar to TR:CAC44562 FT (EMBL:AL596144) Streptomyces coelicolor putative FT DNA-binding protein SCBAC12C8.07c, 284 aa; fasta scores: FT opt: 636 Z-score: 730.2 E(): 4.9e-33; 43.060% identity in FT 281 aa overlap. Contains possible helix-turn-helix motif FT (+3.31 SD) residues 39-60" FT /db_xref="GOA:Q9S1Q5" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q5" FT /protein_id="CAB53276.1" FT /translation="MKDESGNRLGSYLRARRELITPAQAGIPPGGNRRVPGLRREEVAL FT LAGISPDYYLRLERGRDKNPSPQVLESLARVLQLDDIERTYLLGLAAARPRAPRRKRPE FT HVPARVHELLAHLPIPAFVEGRAFDVLASNPMAVALSPRLRPGQNRLRDLLLDPEEQEF FT HQDWPKATADFVAALRTTIGDDTDNPRFVELVGELSLSSQRFRTLWARHEVRSLDGGST FT TVHHPVVGDLHLHRDKLPVEDVILVVYYPDKDSDSDEKLRLLAGLSHSESAGTPRSGSS FT TGGRPPQEE" FT CDS 225476..226237 FT /transl_table=11 FT /gene="SCO0237" FT /gene_synonym="SCJ9A.16" FT /product="putative oxidoreductase" FT /note="SCJ9A.16, possible oxidoreductase, len: 253 aa; FT similar to many proposed oxidoreductases e.g. SW:DLTE_BACSU FT from Bacillus subtilis (252 aa) fasta scores; opt: 368, FT z-score: 429.4, E(): 1.5e-16, (33.2% identity in 205 aa FT overlap). Contains Pfam match to entry PF00106 adh_short, FT short chain dehydrogenase and Prosite match to PS00061 FT Short-chain dehydrogenases/reductases family signature" FT /db_xref="GOA:Q9S1Q4" FT /db_xref="HSSP:1FDU" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q4" FT /protein_id="CAB53277.1" FT /translation="MDLSNRTVLIVGGTSGIGRELACRFAAAGSVVAVAGRSPRALSEL FT AEEGWGTFGADVTDSSSVESLRDAVLDRYPELDTVVTMSGVMLLEDLRDPAHFEAARTT FT IDTNLLGTIRVIDAFTPHLVRRGAGTFITVSSGIAFLPFPPMPSYAASKAAVHAYSEAL FT RAQLDGTGLGVVELVPPAVATAGQEEVNPHALPLEDFATEVMHLLAQDPTPDEVLVKGV FT LTHRWAERDGTYDDLVARRSRALAMLPGRAG" FT misc_feature 225491..226030 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 128.20, E-value 1.6e-34" FT misc_feature 225881..225967 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 226481..227008 FT /transl_table=11 FT /gene="SCO0238" FT /gene_synonym="SCJ9A.17" FT /product="conserved hypothetical protein" FT /note="SCJ9A.17, hypothetical protein, len: 175 aa; similar FT to TR:Q9RI91 (EMBL:AL109949) Streptomyces coelicolor FT hypothetical protein SCJ11.13, 152 aa; fasta scores: opt: FT 683 Z-score: 798.0 E(): 8.1e-37; 68.421% identity in 152 aa FT overlap" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q3" FT /protein_id="CAB53278.1" FT /translation="MSDRSLSSAWLASWTSRVAETLEAMTDEFERRHGFPPGVNEVRRA FT DSADQAAARTLARDSLVPADMVTFYDSIGEVAWADVGNGCFLDPAADVLLRFKHYGTVD FT VGAGQRDRGLVIGSNGGGLSYVAGPGGMIHRTRTASLDEPELDRVADDLRQFLELLEGS FT TRFVTNGDPGCL" FT CDS complement(227081..228154) FT /transl_table=11 FT /gene="SCO0239" FT /gene_synonym="SCJ9A.18c" FT /product="hypothetical protein" FT /note="SCJ9A.18c, unknown, len: 357aa;" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q2" FT /protein_id="CAB53279.1" FT /translation="MDVTESGHAARVSAYAAVGARLSLLSDRRLGNAVSAAPNLGRGIG FT GRSAELDVEGTRVFVKRVPLTDVELQPEHVRSTANVFGLPLFYQYGVGSTGFGAWRELA FT AHIMTTGWALKNEYAGFPLLYHWRVLPDSSPTGFVDGFGGVEGAVAHWEGSSAVRRRLE FT AIGSSSFSLVLFLEHVPQTLAEWLVDSRDTAPRQSGGESPYPWVENALLRGTEFMSARG FT LVHFDAHFANLLTDGQRVYFADFGLALSRDFELSAEERDFLDDHLVYDRSYAPDHLLRH FT HLPHDVRGGTEHGAFLREWVDGHQPADIAPDIGAIIDRHAPHAIVLDDFHHRLLTQSKR FT TPFPAAEIKRALAGGPG" FT CDS complement(228714..229649) FT /transl_table=11 FT /gene="SCO0240" FT /gene_synonym="SCJ9A.19c" FT /product="putative oxidoreductase" FT /note="SCJ9A.19c, possible oxidoreductase, len: 311aa; FT similar to many proposed oxidoreductases eg. TR:O53613 FT (EMBL:AL021428) putative oxidoreductase from Mycobacterium FT tuberculosis (303 aa) fasta scores; opt: 746, z-score: FT 814.7, E(): 0, (43.0% identity in 305 aa overlap). Contains FT Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase" FT /db_xref="GOA:Q9S1Q1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q1" FT /protein_id="CAB53280.1" FT /translation="MTTVNHWTPGDIPDQAGRTALITGGNSGIGLETARALARHGARVI FT LAGRSRTRLDQAAEAVRAATPEARTDTLVLDLSDLSSVRDAATRIAETETVDLLFNNGG FT VMNLPERRTTHDGLEMTVGTNHLGHFAFNAQVWPAVRRSPAPRVVTVSAIAARWPMGRL FT EDLMSEKSYRAMGAYAKSKRANIVYTLELARRTASSPVEALVVHPGAAMTNLQQHGTGP FT LSRMVTPIAARLLMGSAEGAAWPSLYAATSPHVQSGWFIGPAGRDQTSGTPRPAKLPTG FT ADDPAEGRRLWAASEQLTGVPFDIEAEAAV" FT misc_feature complement(229008..229598) FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 91.90, E-value 1.3e-23" FT CDS 229995..230669 FT /transl_table=11 FT /gene="SCO0241" FT /gene_synonym="SCJ9A.20" FT /product="putative transcriptional regulator" FT /note="SCJ9A.20, possible transcriptional regulator, len: FT 224aa; similar to many proposed transcriptional regulators FT eg. TR:O53737 (EMBL:AL021932) putative transcriptional FT regulator from Streptomyces coelicolor (236 aa) fasta FT scores; opt: 308, z-score: 371.4, E(): 2.5e-13, (30.3% FT identity in 221 aa overlap). Contains possible FT helix-turn-helix motif (+3.83 SD) 37-58 aa" FT /db_xref="GOA:Q9S1Q0" FT /db_xref="InterPro:IPR001647" FT /db_xref="UniProtKB/TrEMBL:Q9S1Q0" FT /protein_id="CAB53281.1" FT /translation="MTNFQRARSEEQRAVRRQAILDTTAAMLEEMPVGEVSLNELSRRV FT GLAKSNVLRYFESREAILLELLDRAWQQWVADLPALVHAGVDQGAPVSRRAEQFAAVIA FT ASLAGRQVLCDLLSAQAGVLEHNVSPQVAARYKRAAVANVADIAALAHQHLPELGASAP FT QLTAVMIMAVGAVWTHARPSPAMLSAYEADPSLTAFKLDFVTTLQEMLATLTAGTIARE FT SA" FT CDS 231022..231465 FT /transl_table=11 FT /gene="SCO0242" FT /gene_synonym="SCJ9A.21" FT /product="conserved hypothetical protein" FT /note="SCJ9A.21, unknown, len: 147aa; similar to TR:Q98JA0 FT (EMBL:AP002998) MLR2034 protein from Rhizobium loti FT (Mesorhizobium loti) (145 aa) fasta scores; opt: 334, FT Z-score: 400.1, E(): 1.2e-14, 37.324% identity (37.324% FT ungapped) in 142 aa overlap. Weak similarity to FT SW:YAER_ECOLI hypothetical protein from Escherichia coli FT (129 aa) fasta scores; opt: 105, z-score: 139.5, E(): 2.1, FT (25.0% identity in 148 aa overlap)." FT /db_xref="InterPro:IPR002345" FT /db_xref="UniProtKB/TrEMBL:Q9S1P9" FT /protein_id="CAB53282.1" FT /translation="MTFIRRFDHVGITVSDLEAVTAFFVSLGLEADRKMAVEGEFLDTV FT IGMTDARTEIVMLRPPGGGTTLELSSFTRPDHLPGSPAAPANELGLRNVAFEVHDLQAA FT VDHAVVDGYGLVGGIGEYEGEWRMAYVRGPEGIIVSLAERIEK" FT CDS 231475..231654 FT /transl_table=11 FT /gene="SCO0243" FT /gene_synonym="SCJ9A.22" FT /product="hypothetical protein" FT /note="SCJ9A.22, unknown, len: 59aa;" FT /db_xref="UniProtKB/TrEMBL:Q9S1P8" FT /protein_id="CAB53283.1" FT /translation="MSATVTDEQIRALAATAKPYSLAFLRWGPERTMDGADAIELEHQR FT RMVSLRAEGVIAIL" FT CDS 232508..233518 FT /transl_table=11 FT /gene="SCO0244" FT /gene_synonym="SCJ9A.23" FT /product="putative secreted protein" FT /note="SCJ9A.23, putative secreted protein, len: 336 aa; FT similar to TR:O88063 (EMBL:AL031541) putative secreted FT protein from Streptomyces coelicolor (322 aa) fasta scores; FT opt: 852, z-score: 891.5, E(): 0, (51.9% identity in 320 aa FT overlap)" FT /db_xref="GOA:Q9S1P7" FT /db_xref="InterPro:IPR001460" FT /db_xref="UniProtKB/TrEMBL:Q9S1P7" FT /protein_id="CAB53284.1" FT /translation="MHENPPARRRGRSRREQRRRRRARRRRITWTVTSVVVLIGGAAYA FT ITGTDSGESSAPTRAKAPSSPAVSARAKAGEAPADAEPLPSPTSTLKPFDLEPALAPVT FT ALFGDNRMSVAMLDVESGAMATYGHDAFDTASIVKVDILATLLLQAQDQGRRLTTEERA FT QSAAMIQKSDNDSTSALWTRIGSARGLDAANERLGLTQTQGGDGTVWGITQTTAEDQIR FT LLQSVFGDKSPLSEASRAYIQDLMQHVVGSQTWGVSAAADSGTTALKNGWLKRTQTKKW FT DVNSIGRIQRDGRVYLMAVLLNNCSTQEVGISIVEQATRASAKAFSRKLKEKPTT" FT CDS complement(233854..234873) FT /transl_table=11 FT /gene="SCO0245" FT /gene_synonym="SCJ9A.24c" FT /product="putative integral membrane protein" FT /note="SCJ9A.24c, possible integral membrane protein, len: FT 339aa; similar to many hypothetical proteins eg. FT SW:Y0D3_MYCTU from Mycobacterium tuberculosis (345 aa) FT fasta scores; opt: 598, z-score: 676.4, E(): 2.6e-30, FT (34.2% identity in 333 aa overlap). Contains two Pfam FT matches to entry PF00571 CBS, CBS domain and a Pfam match FT to entry PF01595 DUF21. Also contains possible membrane FT spanning hydrophobic regions in the N-terminal region." FT /db_xref="InterPro:IPR002550" FT /db_xref="UniProtKB/TrEMBL:Q9S1P6" FT /protein_id="CAB53285.1" FT /translation="MSFPLALFVTVLLLVGSGFFVAAEFALVAAKRHRMEKAVADGQRG FT AKAALAGMRELSLMLAGAQLGITVCTLGLGSVSKPAISHELDPLLHELGLPAALSYGVA FT FALAMIVVVFLHMVLGEMAPKSWAIAHPERSAMLLAPPFRAVTTAVRPLIRVLNRISNA FT LVRLCRVAPRDELASVHNRDQLTHLVEESERLGLISETDSDLLTRSLTEPETPVRDLMA FT PAAGIVAVDAGAEAEEILALAAAHDRTRLLVRQEDAILGSVHARDVLVARAQGRATGAR FT ALARPVPELAEDATVAEAIEVLRRRRASLAVVRDGAGRLTGIVSLDDLLARYLQPQTA" FT misc_feature complement(233872..234033) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 32.00, E-value 1.3e-05" FT misc_feature complement(234055..234213) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 11.60, E-value 1.3" FT misc_feature complement(234247..234864) FT /note="Pfam match to entry PF01595 DUF21, , score 143.20, FT E-value 4.6e-39" FT CDS complement(234870..236207) FT /transl_table=11 FT /gene="SCO0246" FT /gene_synonym="SCJ9A.25c" FT /product="putative integral membrane protein" FT /note="SCJ9A.25c, possible integral membrane protein, len: FT 445aa; similar to many hypothetical proteins eg. FT SW:Y0D2_MYCTU from Mycobacterium tuberculosis (455 aa) FT fasta scores; opt: 925, z-score: 997.3, E(): 0, (39.4% FT identity in 411 aa overlap). Contains two Pfam matches to FT entry PF00571 CBS, CBS domain and a Pfam match to entry FT PF01595 DUF21. Also contains possible membrane spanning FT hydrophobic regions in the N-terminal region." FT /db_xref="GOA:Q9S1P5" FT /db_xref="InterPro:IPR000644" FT /db_xref="UniProtKB/TrEMBL:Q9S1P5" FT /protein_id="CAB53286.1" FT /translation="MSAVEAWLGVLAVFVLTAGTGYFVAQEFAYVSADRLALARQAEEG FT DKKAARALRVLERLSFMLSGAQLGITVTGLVVGFIAEPSVSALLRPVLSGVGIPDGAVT FT GISVVLAFVLATVVQMVLGELAPKNLAIAVPERLAKALAGSTLGYLKVVGPVVRIFDGA FT ANRLLRGVGIEPVEELHHGATLEELGHLIGESHEQGELPRGTAQLLDHALEFSERTLHE FT VMVPRADAVFVRKDATAAEAVTLIARHGHSNYPVLGDHPDDVAGVLGVRELMGLPAGQF FT TATTAGAAARRPLLLPDTLPLPDAVERMREDDDEFAVVLDEHGGVAGVVTYEDIAEELV FT GDIADESDTVTAVAVADGEGWLVDAGRRLDEVAEATGVELPEEDDYETVAGLVVDRLGR FT FPAIGDRLTVELRGGGSAVIDVRTLDRHVPERIRIEWLAEKAEEQA" FT misc_feature complement(235188..235349) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 12.70, E-value 0.94" FT misc_feature complement(235374..235538) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 21.90, E-value 0.015" FT misc_feature complement(235572..236189) FT /note="Pfam match to entry PF01595 DUF21, , score 156.50, FT E-value 4.5e-43" FT CDS 236782..237807 FT /transl_table=11 FT /gene="SCO0247" FT /gene_synonym="SCJ9A.26" FT /product="conserved hypothetical protein" FT /note="SCJ9A.26, unknown, possibly membrane associated, FT len: 341aa; similar to TR:P71088 (EMBL:Z82044) hypothetical FT protein from Bacillus subtilis (258 aa) fasta scores; opt: FT 452, z-score: 475.1, E(): 4.2e-19, (36.6% identity in 262 FT aa overlap). Also similar to TR:CAB45285 (EMBL:AL079332) FT hypothetical protein from Streptomyces coelicolor (195 aa) FT fasta scores; opt: 572, z-score: 600.1, E(): 4.6e-26, FT (50.0% identity in 184 aa overlap). Contains possible FT membrane spanning hydrophobic region." FT /db_xref="InterPro:IPR009776" FT /db_xref="UniProtKB/TrEMBL:Q9S1P4" FT /protein_id="CAB53287.1" FT /translation="MDATMVFKRLLGSLGVGAPTVDTVLDPAPVLPGGTLTGQVHLEGG FT QTDFDIEHITLELVARVEAEHEDGEDEGVVVFDRFTVGGGFRLGAEEPRSVPFRVTLPW FT ETPITELYGQPLGIVLGVRTELAVADAKDKGDLDQLTVTALPVQEAVLEAFGQLGFGFG FT SADLEYGHIGGTGQQLPFYQEIELVPAPQYADRLNEIELTFLAGPGGLEVVLEADKRGG FT LLSSGHDAVTRFSVGHHDARDWAAEVEGWVRQLVEHHTTYGAPGTHGHSTPYAGHGHHD FT PHGNGGRHHDDHRSGPGVGTAVAAGAAGLAVGVVGGMVAAEVVDEVGDFFEGDDEEEDE FT G" FT CDS complement(237664..238251) FT /transl_table=11 FT /gene="SCO0248" FT /gene_synonym="SCJ9A.27c" FT /product="hypothetical protein" FT /note="SCJ9A.27c, unknown, len: 195aa; prediction based on FT Hidden Markov Model and amino acid usage." FT /db_xref="UniProtKB/TrEMBL:Q9S1P3" FT /protein_id="CAB53288.1" FT /translation="MPVPKASRPVPPTCPKRRPGTDGAPHIGAGGHRRRKDARSVGPVT FT IPVRVDDGRAAIDEASPGPRSWRTTRRARARAARPGCSARRSTSRPGGVRRVGAAVVPS FT GPDGGCAHVFGGAVMPSRVHCSGIGGRLGMTPFRTCAPGGGGRRSALVLLLVVAFEEVA FT DLVDDFRGHHATDHADRESGRSGRDGRAHTRA" FT CDS complement(238280..239794) FT /transl_table=11 FT /gene="SCO0249" FT /gene_synonym="SCJ9A.28c" FT /product="putative monooxygenase" FT /note="SCJ9A.28c, possible monooxygenase, len: 504 aa; FT similar to many e.g. TR:Q9ZGM8 (EMBL:AF077869) oxygenase FT involved in the last step of mithramycin biosynthesis in FT Streptomyces argillaceus (533 aa) fasta scores; opt: 1215, FT z-score: 1311.5, E(): 0, (45.0% identity in 513 aa FT overlap). Contains Pfam matches to entry PF01360 FT Monooxygenase, Monooxygenase and Pfam match to entry FT PF01494 FAD_binding_3, and Prosite match to PS00013 FT Prokaryotic membrane lipoprotein lipid attachment site. FT Also contains possible uncleavable N-terminal signal FT sequence." FT /db_xref="GOA:Q9S1P2" FT /db_xref="InterPro:IPR003042" FT /db_xref="UniProtKB/TrEMBL:Q9S1P2" FT /protein_id="CAB53289.1" FT /translation="MSTDVIVVGAGPTGLMLACELALAGVRTRVLERRTEPQRDSRALS FT LHPRSVELMDQRGLLDRFLPLGRAVPGWHFAGLRTQLDFSALDSRHGYTLFLAQARTEA FT ILERRAHELGVEISRGHEVLGVRQDGDGVEVEVRAPGGGTETAHSLYAVGCDGGRSIVR FT QAAGIGFPGTDETLTGVLGDFAVVDPQPGALAAARAGGVIVAPLEGGVTRFVYLDPERI FT RVPAREPVSLEEFRTSLTRITGSDCGVAEPVWLSRFGNATRLAESYRSGRILLAGDAAH FT IHFPAAGQGLNTGLQDAMNLGWKLAAVVGGWAPPGLLDGYDGERRPVGRSVTENTEVQT FT LLAELTLVAQYRRPAEALRRLLDQLLGMAEVNRRLADQVSALGTGYPPPDPGADPLVGR FT RMPDVGLTAAGSEATRVYELLHGGRFVLLSLAGDPALRESVDAGWGPRVTAVAVDKYDE FT HPDLDGVTEVLVRPDGHVAWATRTTDGGARDDQRARALTAWAGTRS" FT misc_feature complement(238784..239353) FT /note="Pfam match to entry PF01360 Monooxygenase, FT Monooxygenase, score 166.60, E-value 4.2e-46" FT misc_feature complement(239378..239782) FT /note="Pfam match to entry PF01494 FAD_binding_3, , score FT 137.20, E-value 2.9e-37" FT misc_feature complement(239738..239770) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT misc_feature 239811..239816 FT /note="Cleavage site for AseI restriction endonuclease FT AT*TAAT." FT misc_feature complement(239811..239816) FT /note="Cleavage site for AseI restriction endonuclease FT AT*TAAT." FT CDS 239858..240523 FT /transl_table=11 FT /gene="SCO0250" FT /gene_synonym="SCJ9A.29" FT /product="putative transcriptional regulator" FT /note="SCJ9A.29, possible transcriptional regulator, len: FT 221aa; similar to many tetR-family transcriptional FT regulators eg. SW:TER1_ECOLI TetR from Tn1721 of FT Escherichia coli (216 aa) fasta scores; opt: 429, z-score: FT 484.8, E(): 1.2e-19, (40.7% identity in 209 aa overlap). FT Contains possible helix-turn-helix motif (+4.13 SD) FT 37-58aa." FT /db_xref="GOA:Q9S1P1" FT /db_xref="InterPro:IPR012287" FT /db_xref="PDB:3BQY" FT /db_xref="UniProtKB/TrEMBL:Q9S1P1" FT /protein_id="CAB53290.1" FT /translation="MSLPSSRTRGRPARLDRARTVQTALDLLNESGLDTLTMRRLAQAM FT DVQAGALYRYFAAKQDLLTAMAEHMVDGVADAAGATGDGDWSERTARLARALRAALLAH FT RDGARVFAGTHATGPNTLRFADGLVGVLREAGFGDGDAARALYSVANFTVGHTLEEQAA FT LTPGGGGPLDEATLREAVAAGTYPHLAATLPVLTSTDFTAHFEFGLRLLLDGLRAVRQ" FT CDS complement(240559..240843) FT /transl_table=11 FT /gene="SCO0251" FT /gene_synonym="SCJ9A.30c" FT /product="hypothetical protein" FT /note="SCJ9A.30c, unknown, len: 94aa; prediction based on FT Hidden Markov Model." FT /db_xref="UniProtKB/TrEMBL:Q9S1P0" FT /protein_id="CAB53291.1" FT /translation="MFLRDRRAEPLSTTVSPASRPSWRTSRGTGAEDAAGRATGEAGAA FT AVLAGAAVVIAPSGLPAADVPRHRARLVAIARRTGLARGHRPPSPGRRR" FT CDS complement(240876..242123) FT /transl_table=11 FT /gene="SCO0252" FT /gene_synonym="SCJ9A.31c" FT /product="putative oxidoreductase" FT /note="SCJ9A.31c, possible oxidoreductase, len: 415 aa; FT similar to many e.g. TR:AAD25066 (EMBL:AF121000) FT tetracycline resistance associated oxidoreductase homolog FT from Corynebacterium glutamicum (402 aa) fasta scores; opt: FT 672, z-score: 786.6, E(): 0, (32.8% identity in 390 aa FT overlap) and SW:TETX_BACFR tetracycline resistance FT oxidoreductase from Bacteroides fragilis transposons (388 FT aa) fasta scores; opt: 275, z-score: 324.5, E(): 1e-10, FT (24.9% identity in 377 aa overlap). Contains Pfam match to FT entry PF01360 Monooxygenase, Monooxygenase." FT /db_xref="GOA:Q9S1N9" FT /db_xref="InterPro:IPR003042" FT /db_xref="UniProtKB/TrEMBL:Q9S1N9" FT /protein_id="CAB53292.1" FT /translation="MAQRSGTTSLRVLVAGGGIAGHALAYWLARGGHRVTVRERYPDLR FT ATGAQIDLRGQGIEAVRRMGLLDTVRGRLVDEAGVAFLDARGRPRATLMANTSGRGRQS FT LTSEYEIMRGDLVRILHEATGNDVEYVYGTSVDGFDQDEHEVVAHCSDGSSETYDLLVA FT ADGQGSRLRRAILPDGTDPYWRVGIHMAYWFVPRIASDSNVRDTCMVPGGRQIMRRSHN FT PTETQVYFVLREDSAQASAIHREPVEKQQEFWASRFRDAGWQTERFVEGMRTSPFFYSQ FT EIVQVRTGTWSRGRVVLAGDAAHCASPYSGMGTSGGLVGAHVLAGEINRRPDDLPTALA FT HYDTTLRPFTDEIQGEVNPRLLKLAMPMTQRAIDAFLTVTGMATRLRVPDLATRFSKED FT RGGAWRLPHYPELRTA" FT misc_feature complement(241050..241655) FT /note="Pfam match to entry PF01360 Monooxygenase, FT Monooxygenase, score 52.70, E-value 8.1e-12" FT CDS 242194..242766 FT /transl_table=11 FT /gene="SCO0253" FT /gene_synonym="SCJ9A.32" FT /product="putative tetR-family transcriptional regulator" FT /note="SCJ9A.32, probable tetR-family transcriptional FT regulator, len: 190 aa; similar to many e.g. SW:TER1_ECOLI FT TetR tetracycline resistance repressor from Escherichia FT coli (216 aa) fasta scores; opt: 501, z-score: 616.1, E(): FT 5.9e-27, (44.5% identity in 200 aa overlap). Contains Pfam FT match to entry PF00440 tetR, Bacterial regulatory proteins, FT tetR family and Prosite match to PS01081 Bacterial FT regulatory proteins, tetR family signature. Contains FT possible helix-turn-helix motif (+5.97 SD) 26-47 aa" FT /db_xref="GOA:Q9S1N8" FT /db_xref="InterPro:IPR012287" FT /db_xref="PDB:3FIW" FT /db_xref="UniProtKB/TrEMBL:Q9S1N8" FT /protein_id="CAB53293.1" FT /translation="MTKMNRETVITEALDLLDEVGLDGVSTRRLAKRLGVEQPSLYWYF FT RTKRDLLTAMAQAAMAPHAAEPLPEPGEDWHGWFLRNTRSFRRTLLARRDGARLHAGSR FT PTADLDRVRRKMDFLVASGVPERHAQMAMLAAGRFTVGCVLEEQAETGAGDTADLPADV FT PEIDHESAFEAGLALITDGLVRHVDAR" FT misc_feature 242218..242358 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 67.50, E-value FT 5.2e-17" FT misc_feature 242254..242346 FT /note="PS01081 Bacterial regulatory proteins, tetR family FT signature." FT CDS complement(243022..243762) FT /transl_table=11 FT /gene="SCO0254" FT /gene_synonym="SCJ9A.33c" FT /product="conserved hypothetical protein" FT /note="SCJ9A.33c, hypothetical protein, len: 246 aa; weakly FT similar to TR:Q18926 (EMBL:U23517) hypothetical protein FT from the eukaryote Caenorhabditis elegans (243 aa) fasta FT scores; opt: 354, z-score: 396.7, E(): 9.9e-15, (28.3% FT identity in 240 aa overlap). Also weakly similar to FT TR:O87611 (EMBL:AF087482) dienelactone hydrolase from FT Pseudomonas aeruginosa (236 aa) fasta scores; opt: 212, FT z-score: 241.9, E(): 4.1e-06, (27.4% identity in 230 aa FT overlap). Similar also to TR:Q9I4H1 (EMBL:AE004547) FT Pseudomonas aeruginosa hypothetical protein PA1166, 262 aa; FT fasta scores: opt: 474 Z-score: 515.3 E(): 4.5e-21; 35.000% FT identity in 240 aa overlap" FT /db_xref="GOA:Q9S1N7" FT /db_xref="InterPro:IPR002925" FT /db_xref="UniProtKB/TrEMBL:Q9S1N7" FT /protein_id="CAB53294.1" FT /translation="MTTITTRTVEYAADGLTMIGHLALPPGADRRPAVLLGPEGMGLSD FT VERGRADALAELGYAALAFDLHGGRYLGDPEEMLARCLPLLADPDRMRGIGHAALDVLR FT TQPRTDPGRIAAVGYGTGGAVGLELGRDGVDLRAIGTVNALTTGRPGEAERIRCPVWAG FT VGSQDPIMPPEQRNAFTAEMQAAGVDWRLTVYGGALHAFHHPPVDHPTVPGVGYHPRHA FT QRAWRDVVDLLAECLPLAEDRGTS" FT CDS complement(243936..245672) FT /transl_table=11 FT /gene="SCO0255" FT /gene_synonym="SCF20.01c" FT /gene_synonym="SCJ9A.34c" FT /product="putative sigma factor" FT /note="SCF20.01c, possible transcriptional regulator, len: FT >476aa; weakly similar to the N-terminal region of many FT transcriptional regulator eg. SW:ACOR_ALCEU acetoin FT catabolism regulatory protein from Alcaligenes eutrophus FT (668 aa) fasta scores; opt: 288, z-score: 292.1, E(): FT 6.6e-09, (26.8% identity in 496 aa overlap). Contains Pfam FT match to entry PF00158 sigma54, Sigma-54 transcription FT factors and Prosite match to PS00675 Sigma-54 interaction FT domain ATP-binding region A signature." FT /note="SCJ9A.34c, partial CDS, possible transcriptional FT regulator, len: >185aa; similar to C-terminal region of FT many eg. SW:HYDG_SALTY hydrogenase regulatory gene from FT Salmonella typhimurium (441 aa) fasta scores; opt: 207, FT z-score: 258.1, E(): 5.2e-07, (31.3% identity in 134 aa FT overlap). Contains Pfam match to entry PF00158 sigma54, FT Sigma-54 transcription factors. Contains possible FT helix-turn-helix motif (+4.35 SD) 155-176aa." FT /db_xref="GOA:Q8CK65" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:Q8CK65" FT /protein_id="CAD55431.1" FT /translation="MPEGILNSWQRSKYLGIGTDEVVVPYQPDYDRESRLVRAATPVLD FT RLEQALTGSDASVIVTDRNGWVRDRRVGEKRLSAHLDRVHLAPGFNYAEQFVGTNGIGV FT ALEERRPNVVLGTEHFNERLQSVSCAAAPIRNTVTGRVEGAMNLTCWNGPARLLMAALV FT QEAVDDIERVMYEFSSAHQRALLEAFQQVTHYGDRPVLCLGQDLVLANTAASARLTGDD FT HRLLHEAAAEFGHAPRTRREVRLTGGESVMMRCRQVDSSAGAAGYLLELAFTDRPADAP FT GPGTGSRTGTRHGSRAEGGAAGPRPLPGLAGTDPAWNSVSRTAARCARDRTPLLLHGET FT GTGKATLVRAAHALTGAAWAPVVVDAAAPGLPHAGHDPAAALRAAPAGPGRALILRNVD FT DVGPEDAAAVAEALDTAAARGTWVVGTVQRAPGVPEPLRHCFLEAAAVPALRHRLTDLP FT ALVDCLLRRIGGGVGCAPEVLPPLRRHDWPGNVRELSLVLSKAAAARRTYRIEVGDLPP FT SLHSAGGRSLSVWEASERDTLVQALLEADGNKLLAAQRLGISRTTIYRKMRAYGITLPA FT RG" FT misc_feature complement(243954..244073) FT /note="Pfam match to entry PF00158 sigma54, Sigma-54 FT transcription factors, score 36.00, E-value 3e-09" FT misc_feature complement(244611..244745) FT /note="Pfam match to entry PF00158 sigma54, Sigma-54 FT transcription factors, score 32.10, E-value 3.8e-08" FT misc_feature complement(244632..244673) FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT CDS 245986..246783 FT /transl_table=11 FT /gene="SCO0256" FT /gene_synonym="SCF20.02" FT /product="putative short chain oxidoreductase" FT /note="SCF20.02, possible short chain oxidoreductase, len: FT 265aa; similar to many oxidoreductases e.g. TR:Q9ZNN8 FT (EMBL:AB009078) L-2,3-butanediol dehydrogenase from FT Corynebacterium glutamicum (258 aa) fasta scores; opt: 784, FT z-score: 848.0, E(): 0, (49.4% identity in 255 aa overlap). FT Contains Pfam matches to entry PF00106 adh_short, short FT chain dehydrogenase and to entry PF00678 adh_short_C2, FT Short chain dehydrogenase/reductase C-terminus and Prosite FT match to PS00061 Short-chain dehydrogenases/reductases FT family signature" FT /db_xref="GOA:Q9S2E4" FT /db_xref="HSSP:1GZ6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9S2E4" FT /protein_id="CAB53400.1" FT /translation="MTSVDNATPRTAVVTGAARGIGRGIAERLAEDGLDVVVADLPSMA FT EELSAVAAGIEKTGRRALAVHADVTSKEQTDALVAAAADRFGRIDVYVANAGIARVTPL FT LETDLDEFEQVMAVNLRGVFLSYQAAARQMIAQGGGGKIIGAASIVAHRPFALLGAYSA FT SKWGVRGLTQAAAMEWARHGITVNAYCPGIVGTDMWDLIDERLAEEAGIEKGQAIKKHA FT ESIALGRVEEPADVAAFVSYLASRDSDYMTGQSVMIDGGIQFA" FT misc_feature 246013..246576 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 245.80, E-value 6e-70" FT misc_feature 246427..246513 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT misc_feature 246667..246759 FT /note="Pfam match to entry PF00678 adh_short_C2, Short FT chain dehydrogenase/reductase C-terminus, score 35.90, FT E-value 8.9e-07" FT CDS 246868..247869 FT /transl_table=11 FT /gene="SCO0257" FT /gene_synonym="SCF20.03" FT /product="conserved hypothetical protein" FT /note="SCF20.03, hypothetical protein, len: 333 aa; similar FT to TR:Q9Y9P8 (EMBL:AP000063) hypothetical protein APE2240 FT from Aeropyrum pernix (324 aa) fasta scores; opt: 728, FT z-score: 908.5, E(): 0, (51.7% identity in 298 aa overlap)" FT /db_xref="GOA:Q9S2E3" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q9S2E3" FT /protein_id="CAB53401.1" FT /translation="MYSKDGENYFIVDAHVALWDARRENQRNIHGKQFIDCFYDYHRNL FT SPASELWPYEDFLYQGGERLMKDLFTDGYVDHAIFQPAHLGAFYNTGFGQTEEAFALTR FT KHPGMLTYNHCFDPRFEEAGLKQLREDAARFGLKGVKLYTAEWKGDSRGYKLSDPWTYR FT YLDACRELGIKNIHVHKGPTIRPLDRDAFDVADVDAAASDFTDLNFVVEHCGLPRLEDF FT CWIATQEPNVHAGLAVAIPFMHTRPRYFAQIIGELLYWLDEDRIQFSSDYALWTPRWIV FT EQFVDFRIPDDMTGEYPQLTVAQKKKILGLNAAAMYDIEVPAGLGLAEPAVV" FT CDS 247871..248680 FT /transl_table=11 FT /gene="SCO0258" FT /gene_synonym="SCF20.04" FT /product="hypothetical protein" FT /note="SCF20.04, hypothetical protein, len: 269 aa; similar FT to TR:BAA81254 (EMBL:AP000063) hypothetical protein from FT Aeropyrum pernix (238 aa) fasta scores; opt: 228, z-score: FT 274.4, E(): 6.4e-08, (29.7% identity in 232 aa overlap)." FT /db_xref="InterPro:IPR002744" FT /db_xref="UniProtKB/TrEMBL:Q9S2E2" FT /protein_id="CAB53402.1" FT /translation="MWAAQLEVAARAALDTVYDPELDEPVTDLGFVRSLTAEDGRVTVH FT LRLPTSFCSPNFAYLMASDAKDALSALPGAREVTVLLDDHHDSDLINRGLAADAGYRGT FT FGHEAEQDLEELRGIFRRKAHTAAMERALTALLRARPDLAEEQLGDVVLGDLPDTSATR FT ALLRRRAALGLGTAPADPALVDDDGRPCPRGEVPLRLRFARSVRISIDGNAHFCRGLLR FT TRYPQSAADQSARPEEFPAGGEPVGAGETVPAGELFRLSAPAKENVS" FT CDS 248677..249702 FT /transl_table=11 FT /gene="SCO0259" FT /gene_synonym="SCF1.01" FT /gene_synonym="SCF20.05" FT /product="putative alcohol dehydrogenase (zinc-binding)" FT /note="SCF1.01, partial CDS, probable alcohol FT dehydrogenase, len: >167aa; similar the C-terminal region FT of many eg. SW:ADH3_SULSO NAD-dependent alcohol FT dehydrogenase from Sulfolobus solfataricus (347 aa) fasta FT scores; opt: 274, z-score: 304.7, E(): 1.3e-09, (31.8% FT identity in 170 aa overlap). Also similar to C-terminal FT region of TR:BAA82700 (EMBL:AB017438) from Streptomyces FT coelicolor (346 aa) fasta scores; opt: 372, z-score: 409.3, FT E(): 2e-15, (40.7% identity in 167 aa overlap)." FT /note="SCF20.05, probable alcohol dehydrogenase FT (zinc-binding), len: >236aa; similar to many eg. alcohol FT dehydrogenases eg. SW:ADH1_SULSO NAD-dependent alcohol FT dehydrogenase from Sulfolobus solfataricus (347 aa) fasta FT scores; opt: 476, z-score: 530.0, E(): 3.7e-22, (35.4% FT identity in 243 aa overlap). Also similar to TR:BAA82700 FT (EMBL:AB017438) hypothetical protein from Streptomyces FT coelicolor (346 aa) fasta scores; opt: 591,, z-score: FT 655.8, E(): 3.7e-29, (42.8% identity in 243 aa overlap). FT Contains Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases and Prosite match to PS00059 Zinc-containing FT alcohol dehydrogenases signature." FT /db_xref="GOA:Q8CK64" FT /db_xref="HSSP:1H2B" FT /db_xref="InterPro:IPR013154" FT /db_xref="UniProtKB/TrEMBL:Q8CK64" FT /protein_id="CAD55432.1" FT /translation="MKAVQVVGYGKNLEMAEVPAPEVTGPYDVIVRIGGAGVCRTDLHI FT LEGQWAEKSGVELPYTIGHENAGWVHAVGSAVTNVSEGDKVIVHPLITCGLCRACRAGD FT DVHCENNRFPGIDTAGGYAEYLKTSARSVVRLDDSLEPADVAALADAGLTAYHAAAKAA FT RRLRPGDRCVVIGAGGLGHIGIQVLGALTAAEIVVVDRNPDAVDLAVSVGADHGVLADG FT GHVDRVRELTGGHGAEAVIDFVGEGGSTGDGIGMLRRAGDYHVVGYGENIDVPTIDVIS FT AEINFIGNLVGSYNDLCELMVLAARGRVRLHTAKYSLDRFQDALDDLDGGRIRGRAILV FT P" FT misc_feature 248689..249384 FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score 17.10, E-value 1.1e-10" FT misc_feature 248863..248907 FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature." FT CDS 249755..250084 FT /transl_table=11 FT /gene="SCO0260" FT /gene_synonym="SCF1.02" FT /product="conserved hypothetical protein" FT /note="SCF1.02, unknown, len: 109 aa; similar to TR:O06569 FT (EMBL:Z95585) hypothetical protein from Mycobacterium FT tuberculosis (107 aa) fasta scores; opt: 433, z-score: FT 595.2, E(): 8.7e-26, (56.6% identity in 106 aa overlap)" FT /db_xref="GOA:Q9RKA2" FT /db_xref="InterPro:IPR007138" FT /db_xref="UniProtKB/TrEMBL:Q9RKA2" FT /protein_id="CAB55522.1" FT /translation="MIFITAKFRVLPEHADQWPQVVEDFTRATRAEPGCLWFDWSRSLD FT DPTEYVLVEAFRDDEAGAAHVGSAHFKAAQQTLPPHLATTPRIVNANVPQDDWSLLGEM FT AVDAG" FT CDS complement(250164..250691) FT /transl_table=11 FT /gene="SCO0261" FT /gene_synonym="SCF1.03c" FT /product="putative acetyltransferase" FT /note="SCF1.03c, probable acetyltransferase, len: 175 aa; FT similar to many e.g. SW:MAA_ECOLI maltose FT O-acetyltransferase from Escherichia coli (182 aa) fasta FT scores; opt: 365, z-score: 432.1, E(): 1.1e-16, (43.6% FT identity in 140 aa overlap). Contains Pfam match to entry FT PF00132 hexapep, Bacterial transferase hexapeptide (four FT repeats) and Prosite match to PS00101 Hexapeptide-repeat FT containing-transferases signature" FT /db_xref="GOA:Q9RKA1" FT /db_xref="HSSP:1OCX" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/TrEMBL:Q9RKA1" FT /protein_id="CAB55523.1" FT /translation="MYVHTPEFARHAERIVEVTDATSRLNVLPFSDSAGRSELLSVVFG FT GPLPESVTIYPPFFTEYGLNTTFGENVFVNQGCTFMDKGGIRIGNRVMIAPKASLVTGG FT HPLPLAERRAHLSFAPIVVEDDVWIGTAAVITQGVTIGAGAVVAAGAVVTRDVPAGTVV FT AGVPARVIKQIG" FT misc_feature complement(250221..250307) FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT misc_feature complement(250221..250325) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (four repeats), score 49.50, FT E-value 3.2e-12" FT CDS 250805..251740 FT /transl_table=11 FT /gene="SCO0262" FT /gene_synonym="SCF1.04" FT /product="putative LysR-family transcriptional regulator" FT /note="SCF1.04, probable LysR-family transcriptional FT regulator, len: 311 aa; similar to many transcriptional FT regulators especially in the N-terminal region, e.g. FT SW:OXYR_MYCAV regulator of hydrogen peroxide responsive FT genes from Mycobacterium avium (311 aa) fasta scores; opt: FT 292, z-score: 329.4, E(): 5.5e-11, (36.6% identity in 191 FT aa overlap). Contains Pfam match to entry PF00126 HTH_1, FT Bacterial regulatory helix-turn-helix protein, lysR family FT and Prosite match to PS00044 Bacterial regulatory proteins, FT lysR family signature." FT /db_xref="GOA:Q9RKA0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q9RKA0" FT /protein_id="CAB55524.1" FT /translation="MDVEALRTFVVVAGVGQFQAAADELGISQQAVSKRIAALERHVAV FT TLVVRSSRGSRLSLDGQVFLPHAKKVLTAVEQAERAVNPGSRPLRVDVLNRRISPAQAV FT YRFYRSRPETDLDAVTLDKENAAQAAQAVLEGVVDASFRALPADRVPTGITAERLLDEP FT LELLVGPGHPLADAPRISPVDLAGHRIWIPGIRPGTEWAAFYQALSEAFGLSIDALGPN FT FGDEALMDALADSASLATLVGRGDRYLWPRTHDLRRIPLHDPTPFYPHLLLFRTGDRHP FT VLTALRDHLRTTAPRTPHDAWTPDWTVTVH" FT misc_feature 250811..251230 FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 83.50, E-value 4.3e-21" FT misc_feature 250853..250945 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS complement(251764..252879) FT /transl_table=11 FT /gene="SCO0263" FT /gene_synonym="SCF1.05c" FT /product="putative oxidoreductase" FT /note="SCF1.05c, possible oxidoreductase, len: 371 aa; FT weakly similar to many e.g. TR:O69945 (EMBL:AL023862) FT putative oxidoreductase from Streptomyces coelicolor (430 FT aa) fasta scores; opt: 224, z-score: 247.7, E(): 2e-06, FT (26.0% identity in 392 aa overlap). Contains Pfam match to FT entry PF01408 GFO_IDH_MocA, Oxidoreductase family." FT /db_xref="GOA:Q9RK99" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q9RK99" FT /protein_id="CAB55525.1" FT /translation="MNTPGSALADLARSGRPIGVGVIGLGAHGSWAERSHLPALRAVGG FT FELRALSTSSKQSAERSGHKHGVRRAFGTAAELAACDEVDLVVVAVKVPHHRELVRTVL FT NAGKSVLCEWPLGNGLAEAEDMARLARAHAVPTVVGLQARSHPAFAYTRHLVADGYVGE FT VLSTTVVGSGGAWGATVGPADHHVLDAANGATLLTVPFGHALDGVASVLGEPEELRIQA FT ASRRTSAVDTETGRPVPMTAADQVVASGRLPGGAVATFHYRGGMSRGTNFRWEINGTEG FT DLVLTAPVGHPQLSPLTLEGGRGTSTALAPLTVPEAYARVARLEPRADAPAYAVAHAYQ FT RFLDDLREGTAHVPDFAHGVVRHRSIEQYLP" FT misc_feature complement(252055..252828) FT /note="Pfam match to entry PF01408 GFO_IDH_MocA, FT Oxidoreductase family, score 86.40, E-value 5.9e-22" FT misc_feature complement(252401..252403) FT /gene="none" FT /note="tta" FT CDS 252946..253398 FT /transl_table=11 FT /gene="SCO0264" FT /gene_synonym="SCF1.06" FT /product="putative transcriptional regulator" FT /note="SCF1.06, possible transcriptional regulator, len: FT 150 aa; weakly similar to many e.g. TR:AAD32748 FT (EMBL:AF127374) transcriptional repressor from Streptomyces FT lavendulae (163 aa) fasta scores; opt: 142, z-score: 184.9, FT E(): 0.0062, (27.3% identity in 128 aa overlap). Contains FT Pfam match to entry PF01047 MarR, MarR family and probable FT helix-turn-helix motif (+3.47 SD) 68-89aa." FT /db_xref="GOA:Q9RK98" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q9RK98" FT /protein_id="CAB55526.1" FT /translation="MSTRGRAPDPQEGTSEAALDPIGLWSAFKRAHEVVRTRVIADAAE FT AAGLSEPDLTILADLNKAGGALRQSELAASLGWDRTRVSHQLTRMSKRELVTRRRANGV FT IVVLTDAGHQAITAVYPGLDAAVRRHFTDKLSTQEVETLAAVLDRL" FT misc_feature 253090..253395 FT /note="Pfam match to entry PF01047 MarR, MarR family, score FT 42.90, E-value 7.3e-09" FT CDS 253499..254290 FT /transl_table=11 FT /gene="SCO0265" FT /gene_synonym="SCF1.07" FT /product="putative hydroxylase" FT /note="SCF1.07, possible hydroxylase, len: 263 aa; similar FT to many from Streptomyces sp. eg. TR:Q55078 (EMBL:U50973) FT daunomycin C-14 hydroxylase from Streptomyces sp. strain C5 FT (275 aa) fasta scores; opt: 302, z-score: 356.8, E(): FT 1.7e-12, (39.3% identity in 270 aa overlap). Also similar FT to TR:CAB45588 (EMBL:AL079355) putative hydroxylase from FT Streptomyces coelicolor (263 aa) fasta scores; opt: 746, FT z-score: 870.2, E(): 0, (44.3% identity in 262 aa FT overlap)." FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q9RK97" FT /protein_id="CAB55527.1" FT /translation="MITNDFAPGSPCWLDLGSPDVAGTAAFYGGVFGWTYEAMGEDAEG FT GMFRKDGKIVAGLGRLTEEGARSAWMIYYSVTDADATTQAVQRAGGTVRVAPTDLDDWG FT RMAQYSDPSGGQFAVWQPGRTRGVELVDQPGTLCWTELYTSDAAAAKEFYGGVLGWRFG FT DMAVPGGEGTYSLITPSGLSEDRMHGGLMQLDERDLTLTGGRAYWHPVFAVTDCDAAVS FT AVTAHGGSVQMGPADAEGVGRLAVCLDPSKADFVVLAPASG" FT CDS complement(254332..255309) FT /transl_table=11 FT /gene="SCO0266" FT /gene_synonym="SCF1.08c" FT /product="putative transcriptional regulator" FT /note="SCF1.08c, possible transcriptional regulator, len: FT 325aa; similar to many eg. TR:CAB43482 (EMBL:Y18527) PobR FT regulator from Pseudomonas sp. strain HR199 (293 aa) fasta FT scores; opt: 254, z-score: 302.3, E(): 1.8e-09, (30.3% FT identity in 254 aa overlap). Also similar to TR:O88020 FT (EMBL:AL031107) putative transcriptional regulator from FT Streptomyces coelicolor (301 aa) fasta scores; opt: 318, FT z-score: 376.7, E(): 1.3e-13, (37.2% identity in 253 aa FT overlap). Contains Pfam match to entry PF00165 HTH_2, FT Bacterial regulatory helix-turn-helix proteins, araC FT family." FT /db_xref="GOA:Q9RK96" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q9RK96" FT /protein_id="CAB55528.1" FT /translation="MALLVRCPGRLPRVSIEPLAPGPGIGVSGRAMVKTGHVSAIRQMT FT YQPPGRGAASVETMTFGRLRELNDGGTQRADFHVLAVVDAGRGSVTVDFRLHPLQDRSA FT VWIPPGAVHRWDDVAEVEGHLVLFVPTAPVTHATRELVASPDPAAHWIVPAADWPFVDA FT ARGHLRLEASAPPSDSSTELPAILLSALIARLHPPHAEARLAHPVVRLFRSSVEANFRQ FT HHDAGYYARTLGYAPRTLSRAVRQATGRTAKAYLVERLVLEAKRLLAHERLTAARCAGV FT LGFPDASNFSVFFHKATGERPGAWQAAATGPGVPTASTPPEPVT" FT misc_feature complement(254383..254622) FT /note="Pfam match to entry PF00165 HTH_2, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 14.90, E-value 0.00057" FT CDS 255311..256087 FT /transl_table=11 FT /gene="SCO0267" FT /gene_synonym="SCF1.09" FT /product="putative hydrolase" FT /note="SCF1.09, possible hydrolase, len: 258 aa; similar to FT many e.g. TR:O67982 (EMBL:AF003947) 3-oxoadipate FT enol-lactone hydrolase from Rhodococcus opacus (400 aa) FT fasta scores; opt: 259, z-score: 300.,1 E(): 2.4e-09, FT (31.5% identity in 251 aa overlap). Contains Pfam match to FT entry PF00561 abhydrolase, alpha/beta hydrolase fold" FT /db_xref="GOA:Q9RK95" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q9RK95" FT /protein_id="CAB55529.1" FT /translation="MSTTQHTLVPVYDHRTGTGPTLVFLHYWGGSARTWDLVVDRLPGR FT AVVAVDFRGWGRSRALPGPYTLGRFADDTLAVLADAGITDYVLVGHSMGGKVAQLVAAT FT RPAGLRAIVLVGSGPAKPAARVTPEYREALSHAYDSAESVAGARDHVLTATELPAALKA FT RIVTDSRNVTDAARIEWPLRGIAQDITEHTRRIDVPALVVAGEHDQVEPAGVLRDNLVP FT YLARADFVVVPRTGHLIPLEAPADLADAVTAFATAV" FT misc_feature 255443..256075 FT /note="Pfam match to entry PF00561 abhydrolase, alpha/beta FT hydrolase fold, score 82.90, E-value 6.7e-21" FT CDS 256281..256442 FT /transl_table=11 FT /gene="SCO0268" FT /gene_synonym="SCF1.10" FT /product="hypothetical protein" FT /note="SCF1.10, unknown, len:53 aa;" FT /db_xref="UniProtKB/TrEMBL:Q9RK94" FT /protein_id="CAB55530.1" FT /translation="MRTEIVLSHEAPELDLDLDLRVSDLPEQAASFGEGTFTSPSSYAI FT GTRCPICC" FT CDS 256526..259687 FT /transl_table=11 FT /gene="SCO0269" FT /gene_synonym="SCF1.11" FT /product="hypothetical protein" FT /note="SCF1.11, unknown, len: 1053aa; similar to large FT proteins thought to be involved in the post-translational FT modification of lantibiotics eg. SW:SPAB_BACSU subtilin FT modification protein from Bacillus subtilis (1030 aa) fasta FT scores; opt: 346, z-score: 367.5, E(): 4.2e-13, (22.6% FT identity in 1041 aa overlap)." FT /db_xref="InterPro:IPR006827" FT /db_xref="UniProtKB/TrEMBL:Q9RK93" FT /protein_id="CAB55531.1" FT /translation="MAAESEAHRAAAVFEVREPVLVRMASRPRGAAPATVDAAEPVSGA FT RQLAADPLLGQAVRVASGSLAHSLARLTTDEGASALGRKRTLSAARTLTRYARRAGARP FT TPFGLFAGVGTARFGSVAKAGPGTGEVAVRLDGAWLRRRVLAWLEEPSVRRRVDVVLND FT LCFVRDGRLYLRTGAQEQSVRDNALVGAVRERARNPVPYADLLVSLAERFPALDAERLD FT GQLAGLLQHGFLLTSITPHRIDVALLDGIEAVLDGALPDDARALRDVRAACARHQQDPP FT GMGGDSWQDALDAVRRLDVPGTGDDAHARPPLHVDLHVPGEFVVPEAVGREVCRYAAAI FT WAITPQWTTLAYMRDYRERFIERYGTACAVPLGELVDPHRGLGLPSEYGAEPVYARGGP FT GDEADGPRRAMIGELLQEAVLSGGDLVLTDEVVGRLGEVAGHDPAAAPPRSLELCFQVL FT SESTAALDRGEFRLLGSPHIGAWTAGATAGRFAAAAGLTDELARLAAESTDDTVITAQV FT ELMPHEPRGLNIVQVPRLLPYRIPVGVPDDRRDPRCLDWRSLLVAAGSDGLRLLDPRSG FT RPVRPVLPHMLALDTQAPPVARFLMDLATARPRVWSGWNWAGHDALPYLPRVRYGRVVA FT VPGRWLPGRRLRDAARAQGAGAWEQGLDAWRRRLSVPDRLQIARNDQMYPVDLRERWDR FT DLLRAELTAAQPRFVLYEDLTADGAGLGWNGGHSTEIVVPLAAARRAAGRTAPGRAEPA FT RGRTIPPVRPVPVRPAPVRIHLPGEDWLFVKWYAEPSAHDALLTEHLPALLSEVEDEVD FT RWFFLRYQDPEPHLRLRFHGEPGALNGRVLPAISRVTRVLVESGALRTMALDTYRPESD FT RYGGEAVQEAAERFFRTDSLSALVQLRALRGPARALPGAVLAGLGHAVLLESLGDWDWC FT GWVDRMFTKTVEHEVYQRHRAVADRLIGPGRAVSSAAAALGAPSLGALWSESPEPRAYG FT ELILSAPEADRDEALLSLLHMRHNRLFGIDRAAEARGYAVLRGAVRTHAGRRRHESGSG FT IGSGR" FT CDS 259684..261084 FT /transl_table=11 FT /gene="SCO0270" FT /gene_synonym="SCF1.12" FT /product="conserved hypothetical protein" FT /note="SCF1.12, unknown, len: 466 aa; similar to proteins FT predicted to be involved in lantibiotic biosynthesis eg. FT SW:SPAC_BACSU subtilin biosynthesis protein from Bacillus FT subtilis (441 aa) fasta scores; opt: 502, z-score: 549.2, FT E(): 3.2e-23, (28.9% identity in 405 aa overlap)" FT /db_xref="InterPro:IPR020434" FT /db_xref="UniProtKB/TrEMBL:Q9RK92" FT /protein_id="CAB55532.1" FT /translation="MSGTTEGGSPEHTMDGFSGSGTREAPAGESPRALRERAGAVSAEI FT LDRLADPAATVAATRIPAQAADDGVAEPIWAELTLGSGSPGLALAFAGASRDAARQVPR FT AHAYLTAGTRAVSGRPGTAGGVFKGPGALAFAVLLAHRTTGGYVSALQRFDAYQRDLVR FT TVLPPVEDRPLPTIGHYEVVRGLTGVGRYLLARAESCEEPLTAVLDYLVRLSLGTVEHQ FT GADVPRWWALDAPRIGSEAAFPGGHLNLGLSHGVAGPLALLALAWEQGVRVPRQREAME FT ATAALLRTWAVADRYGLFWPGYLSFAQWQRGPAAYDGTAKWPAWCYGAPGVSRALQLAG FT RALGRADFSDLARASVERLLVLPRPAWGIDDHALCHGWAGALHQLGRLNEGWQDSRLAE FT LRDGIAADLVSAFDPELPFGLRFTMTKVPFGSDVSGYLDGAAGVALALDSYAAAGTPAD FT WDMPLLLA" FT CDS 261366..262319 FT /transl_table=11 FT /gene="SCO0271" FT /gene_synonym="SCF1.13" FT /product="putative binding-protein-dependent transport FT protein" FT /note="SCF1.13, possible binding-protein-dependent FT transport protein, len: 317aa; similar to many predicted FT membrane transporters eg. TR:CAB41203 (EMBL:AL049661) FT putative binding-protein-dependent transport protein from FT Streptomyces coelicolor (327 aa) fasta scores; opt: 624, FT z-score: 720.7, E(): 8.8e-33, (35.9% identity in 320 aa FT overlap). Contains Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, Prosite match to PS00402 FT Binding-protein-dependent transport systems inner membrane FT comp sign. and possible membrane spanning hydrophobic FT regions." FT /db_xref="GOA:Q9RK91" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q9RK91" FT /protein_id="CAB55533.1" FT /translation="MGAHTAVAPPHPGAGTSPGGASAPRRTRRPRDDRKAAWLFLAPAL FT LGFALFYAYPTVRGIYYSLTDYSLIATPDFVGGDNYSRLIGDEQFWNALQVTGYYVLVN FT IVSQTLLALVLATLMHRLTRSVALRAMLLVPWLVPNVTVGLLWMWLLDTNLGLVNHVLN FT SMGMGTTGFFTSPDWAMPSVAAVNTWAYTGYTALLLYAGMLQVPQYLYESASLDGAGEW FT RMFTRITLPLLRPVLSLVLVVSLIGSFQIFDTIAVTTKGGPVSATRVIYYYIYEQAFTN FT FHMGYASAVAVVLALILGVLTAVQMRLLRASRSDLA" FT misc_feature 261969..262190 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 58.30, E-value 1.7e-13" FT misc_feature 261972..262058 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS 262330..263220 FT /transl_table=11 FT /gene="SCO0272" FT /gene_synonym="SCF1.14" FT /product="putative binding-protein-dependent transport FT protein" FT /note="SCF1.14, possible binding-protein-dependent FT transport protein, len: 296aa; similar to many predicted FT membrane transporters eg. TR:O53483 (EMBL:AL021899) sugar FT transport protein from Mycobacterium tuberculosis (280 aa) FT fasta scores; opt: 594, z-score: 708.0, E(): 4.5e-32, FT (34.6% identity in 283 aa overlap). Contains Pfam match to FT entry PF00528 BPD_transp, Binding-protein-dependent FT transport systems inner membrane component, Prosite match FT to PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign. and possible membrane spanning FT hydrophobic regions." FT /db_xref="GOA:Q9RK90" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q9RK90" FT /protein_id="CAB55534.1" FT /translation="MTHIRTRVSPGRIAAWALLVVALFATVFPFYWMVRTALTPAADLY FT TDSTGLVPDHPTMINFLRVLGLTSQEEAVAAGGSGAQVDFLRYLLNSVVYSGLIAVLQT FT LFCAMAGYAFARLRFPGRDLVFGVLIAALMVPPIFTVLPNFVLVKDLGWLNTFVGMVAP FT SVLMTPFAVFFLRQFFLSVPREVEEAAILDGVGPWGIFWRVVMPMTRGPLLTVGLTTTV FT WAWKDYLWPLLSGRDEETRVLTVALGIFQQQSPNTQPDWTGLMAGSALSVLPVLVLLIL FT LGRRLVESLNFTGMK" FT misc_feature 262861..263091 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 64.10, E-value 3.1e-15" FT misc_feature 262864..262950 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS 263285..264634 FT /transl_table=11 FT /gene="SCO0273" FT /gene_synonym="SCF85.01" FT /gene_synonym="SCF1.15" FT /product="putative substrate binding protein" FT /note="SCF85.01, unknown, partial CDS, len: >264 aa. Weakly FT similar to several hypotheticals e.g. Mycobacterium FT tuberculosis TR:O53485 (EMBL; AL021899) lipoprotein FT component of sugar transport system (439 aa), fasta scores FT opt: 258 z-score: 307.2 E(): 9.3e-10 27.9% identity in 222 FT aa overlap and Thermotoga maritima TR:AAD35892 (EMBL; FT AE001748) sugar ABC transporter, periplasmic sugar-binding FT protein TM0810 (420 aa), fasta scores opt: 169 z-score: FT 203.2 E(): 0.00058 25.1% identity in 263 aa overlap." FT /note="SCF1.15, partial CDS, possible substrate binding FT protein (extracellular) (binding-protein-dependent FT transport), len: >221aa; similar to many the N-terminal FT region of undefined function eg. SW:YURO_BACSU hypothetical FT ABC transporter extracellular binding protein from Bacillus FT subtilis (422 aa) fasta scores; opt: 224, z-score: 276.0, FT E(): 5.2e-08, (26.1% identity in 161 aa overlap). Contains FT possible N-terminal signal sequence." FT /db_xref="GOA:Q8CK63" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q8CK63" FT /protein_id="CAD55433.1" FT /translation="MRPRHLRAGAALLCLAALTTLVSCGSSDEAGDGRTTVDYWLWDDL FT QLPAYQECATAFEKANPDIAVRITQTAWNQYWQNLTTQLVSGEAPDVWTNQATYYPQFA FT AGNQLLDLQPYVERDGLDVSAYQAGLADTWVKDDKRYGLPKDWDTMAVVYNTDMLKRQG FT VDLAALNDLTWNPADGGTLEQVIARATVDSEGRNGLDPAFDKDHVEVYGFLPEWADGAQ FT GQNGWGNFAAANGFEYLDKNPWGTHYKFDDPRLAETVSWFRHLIDKGYAPRLDQQSSVA FT RTELLIAGKGAMSLAGSFTVSSFTGPKVKQDFGFAAMPVGPAGRKSALNGLADSVWAGT FT DHKEEAWKWVKYLASADCQDRVAAHGVVFPALKSSTEKALAAHEADGDDVRAFTDAVGT FT KGVTFQLPVTEHGTEISPLVQDAIQSAILGQEDAADALESVNGKVNGLFD" FT RBS 264754..264759 FT CDS 264764..266263 FT /transl_table=11 FT /gene="SCO0274" FT /gene_synonym="SCF85.02" FT /product="putative alpha-galactosidase SCF85.02" FT /note="SCF85.02, possible alpha-galactosidase, len: 499 aa. FT Similar to many alpha galactosidases e.g. Thermus aquaticus FT TR:AAD32628(EMBL; AF135399) alpha-galactosidase (476 aa), FT fasta scores opt: 1329 z-score: 1530.0 E(): 0 45.8% FT identity in 487 aa overlap" FT /db_xref="GOA:Q9S2D9" FT /db_xref="InterPro:IPR000111" FT /db_xref="UniProtKB/TrEMBL:Q9S2D9" FT /protein_id="CAB54159.1" FT /translation="MAQLVELGGRTLAVELAGDAPPRAVEGGLLLPPGRTAVLHGLGDA FT LFYRHGHNSWSPCGWRRLSEAPLRIESAERRLTADDTVWDDPARHHSSAVAALEGPDGR FT VLLLGALGLDVPRLTADRDTLTGWCERDGAPWFLALGSEEEVFAAYARHLGDRLGRSDK FT RAGNVWCSWYAYYESITEEQLTKDVTALRGLPFDVVQVDDGWERAVGDWEANDKFPSGM FT RALADRITDAGLRPGLWIAPFIVLPGSRTARQRPELLLRDGRGEPVVAGHNWGVGYWTL FT DLTLPAAQEHLRETIRRVVREWGFTYLKLDFVGAGAVPGVRFADVGREEAYRTGLSIVR FT EAAGPDAYLLGSGAPLLPSLGLVDAIRSGPDVAPMWEHYATQDPSDALARNAVVNTVHR FT LWQSPLLEVDPDVVYFRSRLNLLTEQQQGLLRDLADVCGFRAVSDPPGWLLPEELKAME FT AYLTGRPEVRRLGRYRFALDGREVDFGAAVTPGDEQRYPLA" FT CDS 266356..267513 FT /transl_table= |