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EBI DbfetchID AL627281; SV 1; linear; genomic DNA; STD; PRO; 265050 BP. XX AC AL627281; XX DT 25-OCT-2001 (Rel. 69, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete DE chromosome; segment 17/20 XX KW . XX OS Salmonella enterica subsp. enterica serovar Typhi OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. XX RN [1] RP 1-265050 RX DOI; 10.1038/35101607 RX PUBMED; 11677608. RA Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J., RA Churcher C., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M., RA Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A., RA Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T., RA Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A., RA Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M., RA Rutherford K., Simmonds M., Skelton J., Stevens K., Whitehead S., RA Barrell B.G.; RT "Complete genome sequence of a multiple drug resistant Salmonella enterica RT serovar Typhi CT18"; RL Nature 413(6858):848-852(2001). XX RN [2] RP 1-265050 RA Parkhill J.; RT ; RL Submitted (25-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. XX DR EMBL-CON; AL513382. DR RFAM; RF00391; RtT. XX CC E-mail: parkhill@sanger.ac.uk CC CC Notes: CC Details of S. typhi sequencing at the Sanger Centre CC are available on the World Wide Web. CC (URL, http://www.sanger.ac.uk/Projects/S_typhi/) XX FH Key Location/Qualifiers FH FT source 1..265050 FT /organism="Salmonella enterica subsp. enterica serovar FT Typhi" FT /strain="CT18" FT /mol_type="genomic DNA" FT /db_xref="taxon:90370" FT RBS 295..299 FT /note="possible RBS" FT misc_feature 306..881 FT /note="Pfam match to entry PF00043 GST, Glutathione FT S-transferases., score 128.20, E-value 6.1e-38" FT CDS 306..914 FT /transl_table=11 FT /gene="STY4112" FT /product="putative glutathione transferase" FT /note="Similar to Alopecurus myosuroides glutathione FT transferase gst1B TR:Q9SB98 (EMBL:AJ010449) (235 aa) fasta FT scores: E(): 4.4e-08, 26.5% id in 211 aa and to many FT putative glutathione S-transferases. Similar to Neisseria FT gonorrhoeae pilE expression regulator RegF regF TR:O33374 FT (EMBL:X99693) (201 aa) fasta scores: E(): 4.5e-08, 31.6% id FT in 206 aa" FT /note="Orthologue of E. coli YIBF_ECOLI; Fasta hit to FT YIBF_ECOLI (202 aa), 87% identity in 202 aa overlap" FT /db_xref="GOA:Q8Z2D9" FT /db_xref="InterPro:IPR017933" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D9" FT /protein_id="CAD07942.1" FT /translation="MKLIGSYTSPFVRKISVLLLEKGITFEFINELPYEADNGVAQYNP FT LGKVPALVTEKGEYWFDSPIIAEYIELLDIAPAMLPRDPMAALKVRQLEALADGIMDAA FT LVSVREQARPAAQQSETELLRQREKINRSLDMLESYLSDGTLKTDTVNLATIAIACAVG FT YLNFRRVAPGWCVSRPHLVKLVETLFQRESFARTEAPKA" FT CDS 1013..2404 FT /transl_table=11 FT /gene="STY4113" FT /gene_synonym="selA" FT /product="L-seryl-tRNA(Ser) selenium transferase" FT /EC_number="2.9.1.1" FT /note="Orthologue of E. coli selA (SELA_ECOLI); Fasta hit FT to SELA_ECOLI (463 aa), 86% identity in 463 aa overlap" FT /db_xref="GOA:Q8Z2D8" FT /db_xref="InterPro:IPR004534" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z2D8" FT /protein_id="CAD07943.1" FT /translation="MTSETRTLYSQLPAIDRLLHDSAFLSLRDRYGHTQVVDLLRRMLD FT DARDVIRNTQTLPDWYADWAQEAKLRLENAAQSALRPVINLTGTVLHTNLGRALQAQEA FT IEAVTQAMRAPVTLEYDLDGAGRGHRDRALATLLCRITGAEDACIVNNNAAAVLLMLAA FT TASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHAKDYRQAVNENTGLL FT MKVHTSNYSIEGFTKTVEEAELAEIGRELDIPVVADLGSGSLVDLSQYGLPKEPMPQQL FT IAAGVSLVSFSGDKLLGGPQAGIIVGKKAMIAQLQSHPLKRALRADKMTLAALEATLRL FT YLHPEALAEKLPTLRLLTRSEASIREQAQRLQARLAARYGDEFALEVKPCLSQIGSGSL FT PVDRLPSAAMTFTPHDGRGSRLEALAARWRTLPVPVIGRIYDGRLWLDMRCLEDESRFM FT EMMLK" FT RBS 2386..2389 FT /note="possible RBS" FT misc_feature 2401..3231 FT /note="Pfam match to entry PF00009 GTP_EFTU, Elongation FT factor Tu family, score 175.90, E-value 2.2e-51" FT CDS 2401..4251 FT /transl_table=11 FT /gene="STY4114" FT /gene_synonym="selB" FT /product="selenocysteine-specific elongation factor" FT /note="Orthologue of E. coli selB (SELB_ECOLI); Fasta hit FT to SELB_ECOLI (614 aa), 85% identity in 615 aa overlap" FT /db_xref="GOA:Q8Z2D7" FT /db_xref="HSSP:1G7S" FT /db_xref="InterPro:IPR015191" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D7" FT /protein_id="CAD07944.1" FT /translation="MIIATAGHVDHGKTTLLQAITGINADRLPEEKKRGMTIDLGYAYW FT PQPDGRVLGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLQILQLTGN FT LQLTVALTKADRVDEARISEVREEVLAALDNYGFADTVLFVTAANEGRGIAELRAHLQQ FT LPARLHAAQHRFRLAIDRAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVNTPMRVRSLH FT AQNQPTDHAYAGQRIALNIAGDAEKEQLNRGDWLLSDAPAGEAFSRVIVSLALHAPLSQ FT WQPLHIHHAASHVTGRVSLLEGALAELIFDTPLWLADNDRLVLRDISARATLAGARVVT FT LNAPRRGKRKPDYLHWLSTLADAQDDSAALAIHLERGAVNLPDFGWARQLNPLGMRQLI FT EQHGFIQAGDNLLSAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEAL FT VLMLIERMRDEGLIHSHHGWLHLPDHKAGFSDEQQAVWQKVEPLFGDEPWWVRDLAKET FT GTEEQLMRLVLRQAAQQGIITAIVKDRYYRNDRIVAFANMIRELDQERGSTCAADFRDR FT LNVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPQKE" FT misc_feature 2419..2442 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 2476..2523 FT /note="PS00301 GTP-binding elongation factors signature" FT CDS complement(4536..5417) FT /transl_table=11 FT /gene="STY4115" FT /product="putative sugar kinase" FT /note="Similar to e.g. Bacillus megaterium glucose kinase FT glk TR:O31392 (EMBL:AJ000005) (324 aa) fasta scores: E(): FT 1.5e-16, 29.5% id in 319 aa and Streptomyces coelicolor FT glucokinase SW:GLK_STRCO (P40184) (317 aa) fasta scores: FT E(): 2.8e-16, 31.4% id in 318 aa. As the N-terminal FT helix-turn-helix domain of ROK-family tarnscriptional FT regulators is absent, this is probably a sugar kinase" FT /note="Paralogue of E. coli yhcI (YHCI_ECOLI); Fasta hit to FT YHCI_ECOLI (291 aa), 30% identity in 306 aa overlap" FT /db_xref="GOA:Q8Z2D6" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D6" FT /protein_id="CAD07945.1" FT /translation="MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQ FT DVVARCQQDYDIAAIGVSFPGHINPHNGHAAKAGALAYLDDVNLMELFSGLTDLPLVVE FT NDANCAALGEMWRGAGQHYDNLVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMPVGN FT NGESMHKIASTSGLMASCRQALALPAEEMPPADVIFERMATDVHLREAVNDWARYLSRG FT VYSVISMFDPGVVLIGGGISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQAGRLG FT AVWLAQQKLDRR" FT misc_feature complement(4920..5402) FT /note="Pfam match to entry PF00480 ROK, ROK family, score FT 122.90, E-value 1.8e-35" FT RBS complement(5424..5427) FT /note="possible RBS" FT RBS 5573..5579 FT /note="possible RBS" FT CDS 5586..7124 FT /transl_table=11 FT /gene="STY4116" FT /gene_synonym="aldB" FT /product="aldehyde dehydrogenase B" FT /EC_number="1.2.1.22" FT /note="Fasta hit to ALDA_ECOLI (478 aa), 33% identity in FT 478 aa overlap" FT /note="Fasta hit to FEAB_ECOLI (499 aa), 34% identity in FT 481 aa overlap" FT /note="Fasta hit to YNEI_ECOLI (462 aa), 31% identity in FT 465 aa overlap" FT /note="Fasta hit to DHAB_ECOLI (489 aa), 38% identity in FT 478 aa overlap" FT /note="Fasta hit to DHAL_ECOLI (495 aa), 40% identity in FT 481 aa overlap" FT /note="Fasta hit to YDCW_ECOLI (474 aa), 35% identity in FT 481 aa overlap" FT /note="Fasta hit to GABD_ECOLI (482 aa), 34% identity in FT 485 aa overlap" FT /note="Orthologue of E. coli aldB (ALDB_ECOLI); Fasta hit FT to ALDB_ECOLI (512 aa), 96% identity in 512 aa overlap" FT /db_xref="GOA:Q8Z2D5" FT /db_xref="HSSP:1O02" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D5" FT /protein_id="CAD07946.1" FT /translation="MTNNPPSTRIQPSEYGYPLKLKARYDNFIGGDWVAPADGEYYQNL FT TPVTGQPLCEVASSGKKDIDLALDAAHKAKDKWAHTSVQDRAAILFKIADRMEQNLELL FT ATAETWDNGKPIRETSAADIPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGV FT VGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVVNVV FT NGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADV FT MDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPL FT DSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELDGELKEGYYLEPTILFGK FT NNMRVFQEEIFGPVLAVTTFKTMEKALEIANDTQYGLGAGVWSRNGNLAYKMGRGIQAG FT RVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF" FT misc_feature 5679..7097 FT /note="Pfam match to entry PF00171 aldedh, Aldehyde FT dehydrogenase family, score 777.60, E-value 5e-230" FT misc_feature 6384..6407 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site" FT misc_feature 6483..6518 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site" FT CDS complement(7242..9197) FT /transl_table=11 FT /gene="STY4117" FT /product="conserved hypothetical protein" FT /note="Similar to Thermotoga maritima hypothetical protein FT TM0280 TR:Q9WYB6 (EMBL:AE001710) (620 aa) fasta scores: FT E(): 2.3e-26, 38.4% id in 636 aa and Bacteroides ovatus FT ORF1 TR:Q45327 (EMBL:U15179) (436 aa) fasta scores: E(): FT 7.6e-13, 26.9% id in 294 aa" FT /db_xref="GOA:Q8Z2D4" FT /db_xref="InterPro:IPR012878" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D4" FT /protein_id="CAD07947.1" FT /translation="MNVLEVDLHKLTVSDPLLGQYQQLVRDVVIPYQWDALNDRIPEAE FT PSHAIENFRIAAGQQTGDFYGMVFQDSDVAKWLEAVAWSLCQKPDPELEKTADEVIELV FT AAAQCDDGYLNTYFTAKAPQERWSNLAECHELYCAGHLIEAGVAFFQATGKRRLLDVVC FT RLADHIDSTFGPGENQLHGYPGHPEIELALMRLYEVTEQPRYMTLASYFIGQRGAQPHF FT YDEEYEKRGQTSYWHTYGPAWMVKDKAYSQAHLPISQQQTAIGHAVRFVYLMTGVAHLA FT RLSNDEGKRQDCLRLWKNMAQRQLYITGGIGSQSSGEAFSSDYDLPNDSVYAESCASIG FT LMMFARRMLEMEADSQYADVMERALYNTVLGGMALDGKHFFYVNPLEVHPKSLKFNHIY FT DHVKPIRQRWFGCACCPPNIARVLTSIGHYIYTPRADALYINMYVGNSMEIPVENGALK FT LRISGNYPWHEQVKIAIDSVQPVRHTLALRLPDWCPEAKVTLNGLEVEQDIRKGYLHIR FT RTWQEGDTISLTLPMPVRRVYGNPLARHVAGKVAIQRGPLVYCLEQADNGEELHNLWLP FT KESEFRVFEGKGLFAHKMLIQAEGEKQSAADAQHQALWHYDNAPSSRQPQTLTFIPWFS FT WANRGEGEMRIWINER" FT RBS complement(9204..9210) FT /note="possible RBS" FT CDS 9461..10273 FT /transl_table=11 FT /gene="STY4118" FT /product="putative transcriptional regulator" FT /note="Similar to e.g. Erwinia chrysanthemi arabinose FT operon regulatory protein araC SW:ARAC_ERWCH (P07642) (310 FT aa) fasta scores: E(): 1.4e-07, 24.5% id in 257 aa" FT /db_xref="GOA:Q8Z2D3" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D3" FT /protein_id="CAD07948.1" FT /translation="MLELSITLPIKVQNGGLFISRGIGRHPARRLQSWEIIFVEKGCLK FT IQEECVFCVEAGESLLLWPHRRHIGVEEFPADLKFYWLHFEVKAPDSDPRWLTHLSVPQ FT HTQVADPQALIALFRQFMNEQEKHQRSPALEFIVLLILQQLTVDARQNENAEAAGVSLA FT WKAQQLIRTHYHLPLSSAVLAKELHCNVDYLGRVYRRVFHLTLTEAIHRQRVREAEKLL FT ISDARSLKEVAERCGFNDVGYFRQIFRKHTGLTPTAWKRRYSKEHVNS" FT misc_feature 9989..10249 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 71.40, E-value 1.9e-17" FT misc_feature 10100..10228 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature" FT CDS complement(10434..11129) FT /transl_table=11 FT /gene="STY4119" FT /gene_synonym="yiaS" FT /gene_synonym="sgbE" FT /product="putative sugar isomerase" FT /EC_number="5.1.-.-" FT /note="Similar to Salmonella typhimurium FT L-ribulose-5-phosphate 4-epimerase araD SW:ARAD_SALTY FT (P06190) (231 aa) fasta scores: E(): 0, 76.2% id in 231 aa" FT /note="Fasta hit to SGAE_ECOLI (228 aa), 63% identity in FT 230 aa overlap" FT /note="Fasta hit to ARAD_ECOLI (231 aa), 77% identity in FT 231 aa overlap" FT /note="Orthologue of E. coli yiaS (SGBE_ECOLI); Fasta hit FT to SGBE_ECOLI (231 aa), 93% identity in 231 aa overlap" FT /db_xref="GOA:Q8Z2D2" FT /db_xref="HSSP:1K0W" FT /db_xref="InterPro:IPR004661" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D2" FT /protein_id="CAD07949.1" FT /translation="MLEQLKAEVLAANLALPAHGLVTFTWGNVSAVDETRKLMVIKPSG FT VEYEVMTADDMVVVEIASGKVVEGNKKPSSDTATHLALYRRYPQIGGIVHTHSRHATIW FT SQAGLDLPAWGTTHADYFYGAIPCTRLMTVEEINGEYEYQTGEVIIKTFEERGLDPAQI FT PAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPDMQPELLDKHYLRK FT HGANAYYGQ" FT misc_feature complement(10446..11123) FT /note="Pfam match to entry PF00596 Aldolase_II, Class II FT Aldolase and Adducin N-terminal domain., score 448.70, FT E-value 5e-131" FT CDS complement(11123..11983) FT /transl_table=11 FT /gene="STY4120" FT /gene_synonym="yiaR" FT /gene_synonym="sgbU" FT /product="putative sugar-phosphate isomerase" FT /EC_number="5.-.-.-" FT /note="Fasta hit to SGAU_ECOLI (284 aa), 59% identity in FT 279 aa overlap" FT /note="Orthologue of E. coli yiaR (SGBU_ECOLI); Fasta hit FT to SGBU_ECOLI (286 aa), 91% identity in 286 aa overlap" FT /db_xref="GOA:Q8Z2D1" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D1" FT /protein_id="CAD07950.1" FT /translation="MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERL FT SRLEWTSAQRASLVNAMLESGVAIPSMCLSAHRRFPFGSRDEAVRQRAREIMTKAIRLA FT RDLGIRTIQLAGYDVYYEEHDEGTQQRFAEGLAWAVEQAAAAQVMLAVEIMDTAFMNSI FT SKWKKWDEMLSSPWFTVYPDVGNLSAWGNDVTAELKLGIDRIAAIHLKDTLPVTGDNPG FT QFRDVPFGEGCVDFVSIFKTLHELNYRGSFLIEMWTEKASEPVLEIIQARRWIESRMQE FT GGFTC" FT RBS complement(11135..11142) FT /note="possible RBS" FT CDS complement(11976..12638) FT /transl_table=11 FT /gene="STY4121" FT /gene_synonym="yiaQ" FT /gene_synonym="sgbH" FT /product="putative hexulose-6-phosphate synthase" FT /EC_number="4.1.2.-" FT /note="Similar to Methylomonas aminofaciens FT hexulose-6-phosphate synthase hps SW:HUMS_METAM (Q48907) FT (208 aa) fasta scores: E(): 5.9e-17, 34.6% id in 205 aa" FT /note="Fasta hit to SGAH_ECOLI (216 aa), 45% identity in FT 216 aa overlap" FT /note="Orthologue of E. coli yiaQ (SGBH_ECOLI); Fasta hit FT to SGBH_ECOLI (220 aa), 90% identity in 220 aa overlap" FT /db_xref="GOA:Q8Z2D0" FT /db_xref="HSSP:1Q6O" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q8Z2D0" FT /protein_id="CAD07951.1" FT /translation="MSRPLLQLALDHTSLEAAQRDVALLQDHVDIVEAGTILCLTEGLS FT AVKALRAQCPEKIIVADWKVADAGETLAQQAFSAGANWMTIICAAPLATVEKGHAVAQS FT CGGEIQMELFGNWTLDDARDWYRVGVRQAIYHRGHDAQASGQQWGEADLARMKALSDIG FT LELSITGGITPADLPLFRDINVKAFIAGRALAGAAHPAQVAAEFHAQIDAIWGEKHA" FT RBS complement(11990..11993) FT /note="possible RBS" FT CDS complement(12635..14131) FT /transl_table=11 FT /gene="STY4122" FT /gene_synonym="lyxK" FT /product="putative L-xylulose kinase" FT /EC_number="2.7.1.53" FT /note="Orthologue of E. coli lyxK (LYXK_ECOLI); Fasta hit FT to LYXK_ECOLI (498 aa), 86% identity in 498 aa overlap" FT /db_xref="GOA:Q8Z2C9" FT /db_xref="InterPro:IPR018485" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C9" FT /protein_id="CAD07952.1" FT /translation="MSNYWLGLDCGGSWLKAGLYDGAGREVAVQRLPLHALSPQPGWVE FT RDMTELWQQCASVISKLLTHTGVSGSQIRGLGISAQGKGLFLLDKSDRPLGKAILSSDR FT RAMEIVQRWQKEAVPQKLYPLTRQTLWTGHPVSLLRWVKENEPQRYAQIGSVMMTHDYL FT RWCLTGVKGCEESNISESNLYNMATGQYDPRLTEWLGISEIDSALPPVVGSAEICGEIT FT AQAAAITGLAAGTPVVGGLFDVVSTALCAGIEDESTLNAVMGTWAVTSGIAHGLRDHEA FT HPYVYGRYVNDGQYIVHEASPTSSGNLEWFTAQWGYLSFDEINQAVASLPKAGSDLFFL FT PFLYGSNAGLEMTCGFYGMQALHNRAHLLQALYEGVVFSHMTHLNRMRERFTEVCALRV FT TGGPAHSDVWMQMLSDVSGLRIELPQVEETGCFGAALAARVGTGVYRDFHEAQRDLQHP FT VRTLLPDMTAHALYQRKYRQYQDLIEALQGYHARIKEHAL" FT RBS complement(12647..12653) FT /note="possible RBS" FT misc_feature complement(12827..13906) FT /note="Pfam match to entry PF00370 FGGY, FGGY family of FT carbohydrate kinases, score 586.20, E-value 2e-172" FT CDS complement(join(14138..15091,15868..15897)) FT /pseudo FT /transl_table=11 FT /gene="STY4123" FT /gene_synonym="yiaO" FT /product="putative periplasmic protein (pseudogene)" FT /note="Similar to Rhodobacter capsulatus FT C4-dicarboxylate-binding periplasmic protein precursor dctP FT SW:DCTP_RHOCA (P37735) (333 aa) fasta scores: E(): 4.5e-24, FT 29.6% id in 301 aa. This CDS appears to have been truncated FT by the adjacent IS element and is missing its N-terminus, FT including part of a probable N-terminal signal sequence. FT There is an alternative start codon at aa 11, which would FT create a much weaker signal sequence" FT /note="Orthologue of E. coli yiaO (YIAO_ECOLI); Fasta hit FT to YIAO_ECOLI (328 aa), 90% identity in 308 aa overlap" FT RBS complement(14141..14146) FT /note="possible RBS" FT repeat_region 15095..15119 FT /note="inverted repeat surrounding IS1" FT repeat_region 15095..15866 FT /note="IS1" FT CDS 15152..15427 FT /transl_table=11 FT /gene="STY4124" FT /product="insertion element IS1 protein InsA" FT /note="Fasta hit to ISA2_ECOLI (91 aa), 90% identity in 91 FT aa overlap" FT /note="Paralogue of E. coli insA_5 (ISA1_ECOLI); Fasta hit FT to ISA1_ECOLI (91 aa), 98% identity in 91 aa overlap" FT /db_xref="GOA:Q7AQV4" FT /db_xref="InterPro:IPR003220" FT /db_xref="UniProtKB/TrEMBL:Q7AQV4" FT /protein_id="CAD07954.1" FT /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTY FT TASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" FT misc_feature 15197..15220 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 15346..15849 FT /transl_table=11 FT /gene="insB" FT /gene_synonym="STY4125" FT /product="insertion element IS1 protein InsB" FT /note="Similar to Escherichia coli insertion element IS1 FT protein InsB insB SW:INSB_ECOLI (P03830) (167 aa) fasta FT scores: E(): 0, 97.0% id in 167 aa" FT /db_xref="GOA:Q7AQU0" FT /db_xref="InterPro:IPR005063" FT /db_xref="UniProtKB/TrEMBL:Q7AQU0" FT /protein_id="CAD07955.1" FT /translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDE FT QWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWP FT LYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNI FT KHYQ" FT repeat_region complement(15842..15866) FT /note="inverted repeat surrounding IS1" FT CDS complement(15909..17186) FT /transl_table=11 FT /gene="STY4126" FT /gene_synonym="yiaN" FT /product="putative membrane protein" FT /note="Similar to Haemophilus influenzae hypothetical FT protein HI1029 SW:YIAN_HAEIN (P44993) (425 aa) fasta FT scores: E(): 0, 67.0% id in 424 aa and Haemophilus FT influenzae hypothetical protein HI0050 SW:Y050_HAEIN FT (P44483) (401 aa) fasta scores: E(): 0, 48.5% id in 402 aa" FT /note="Orthologue of E. coli yiaN (YIAN_ECOLI); Fasta hit FT to YIAN_ECOLI (424 aa), 90% identity in 398 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z2C8" FT /db_xref="InterPro:IPR010656" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C8" FT /protein_id="CAD07956.1" FT /translation="MAVVIFLCCLLGGIAIGLPIAWSLLLCGAALMAYLDMFDVQIMAQ FT TLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVIAAMIM FT ASLSGSAVADTAAVAALLVPMMRSANYPINRSVGLIASGGIIAPIIPPSIPFIIFGVSS FT GLSISKLFMAGIAPGIMMGAALMLTWWWQAGRLNLPSQPKATPREIWYSLVSGIWALFL FT PVIIIGGFRSGLFTPTEAGAVAAFYALFVAVVIYRELTFSSLYHVLVNAAKTTSVVMFL FT VAAAQVSAWLITIAELPMIVSDLLQPLVDSPRLLFIVIMISIMVVGMVMDLTPTVLILT FT PVLLPLVKEANIDPIYFGVMFIINCSIGLITPPVGNVLNVISGVAKLKFDDAVRGVFPY FT VVVLMSLLVLFIFIPELIITPLKWIN" FT misc_feature complement(16320..16793) FT /note="Pfam match to entry PF00597 DedA, DedA family, score FT 193.80, E-value 2.7e-54" FT CDS complement(17189..17662) FT /transl_table=11 FT /gene="STY4127" FT /gene_synonym="yiaM" FT /product="putative membrane protein" FT /note="Similar to Haemophilus influenzae hypothetical FT protein HI1030 SW:YIAM_HAEIN (P44994) (161 aa) fasta FT scores: E(): 1.9e-19, 39.6% id in 144 aa and Haemophilus FT influenzae hypothetical protein HI0051 SW:Y051_HAEIN FT (P44484) (165 aa) fasta scores: E(): 1.1e-08, 27.2% id in FT 136 aa" FT /note="Orthologue of E. coli yiaM (YIAM_ECOLI); Fasta hit FT to YIAM_ECOLI (157 aa), 76% identity in 157 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q8XG27" FT /protein_id="CAD07957.1" FT /translation="MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLF FT VWLTFIGAIVAFMDNAHVQVTFVVEKLSPANQRRLSLLTHSLILLLCIALGWGSLQKAL FT QDWSDHSPILGLPIGLMYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA" FT RBS complement(17194..17199) FT /note="possible RBS" FT misc_feature complement(17609..17641) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS complement(17668..17671) FT /note="possible RBS" FT CDS complement(17801..18733) FT /transl_table=11 FT /gene="STY4128" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C7" FT /protein_id="CAD07958.1" FT /translation="MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQP FT CLEHLHPLGDEWLLRHTPGNWQIVVTAIMETMRRRSENGGFGLASSDEEQRKACVEYYR FT HLHQKINKINGNNTGKVIALELHAAPLAGNPNVAQATDAFARSLKEIANWDWSCDLVLE FT HCDAMTGPAPRKGFLPLVNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQAKQAG FT KLGALMFSGTTLDGEYGEWQDLHAPFAPFCPQSLMTEKHVKELITAAAPELLQFTGIKL FT LEINASADINHRINILRDGINMMKKATRR" FT RBS complement(18740..18743) FT /note="possible RBS" FT CDS complement(18757..19221) FT /transl_table=11 FT /gene="STY4129" FT /gene_synonym="yiaL" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yiaL (YIAL_ECOLI); Fasta hit FT to YIAL_ECOLI (155 aa), 83% identity in 154 aa overlap" FT /db_xref="HSSP:1JOP" FT /db_xref="InterPro:IPR004375" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C6" FT /protein_id="CAD07959.1" FT /translation="MIFGHIAQPNPCHLPAAIEKALHFLRTTDFRTLEPGVVEIDGKNT FT FAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGEEKIGVAIDTGNNQISESLLEQRDIIF FT YHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSIATPIRKIVVKVAIDVL" FT RBS complement(19229..19235) FT /note="possible RBS" FT CDS complement(19233..20231) FT /transl_table=11 FT /gene="STY4130" FT /product="putative carboxylic acid dehydrogenase" FT /note="Similar to Methanothermus fervidus malate FT dehydrogenase mdh SW:MDH_METFE (P16142) (339 aa) fasta FT scores: E(): 1.7e-18, 27.2% id in 338 aa and Alcaligenes FT eutrophus L-lactate dehydrogenase ldh SW:LDH_ALCEU (Q07251) FT (349 aa) fasta scores: E(): 1.8e-18, 24.8% id in 343 aa" FT /note="Orthologue of E. coli YIAK_ECOLI; Fasta hit to FT YIAK_ECOLI (332 aa), 89% identity in 332 aa overlap" FT /db_xref="GOA:Q8Z2C5" FT /db_xref="HSSP:1NXU" FT /db_xref="InterPro:IPR003767" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z2C5" FT /protein_id="CAD07960.1" FT /translation="MKVTFEELKGAFYRVLRSRNIAEDTADACAEMFARTTESGVYSHG FT VNRFPRFIQQLDNGDIIPDAKPQRVTSLGAIEQWDAQRAIGNLTAKKMMDRAIELASDH FT GIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLIVAI FT PSTPITMVDMSMSMFSYGMLEVNRLAGRELPVDGGFDDNGQLTKEPGVIEKNHRILPMG FT YWKGSGLSIVLDMIATLLSNGSSVAEVTQENSDEYGVSQIFIAIEVDKLIDGATRDAKL FT QRIMDFITTAERADDNVAIRLPGHEFTKLLDDSRCNGITIDDSVWAKIQAL" FT RBS complement(20238..20243) FT /note="possible RBS" FT RBS 20444..20449 FT /note="possible RBS" FT CDS 20461..21261 FT /transl_table=11 FT /gene="STY4131" FT /gene_synonym="yiaJ" FT /product="putative transcriptional regulator" FT /note="Similar to Erwinia chrysanthemi PIR protein pir FT TR:O87190 (EMBL:AB017637) (272 aa) fasta scores: E(): 0, FT 75.8% id in 256 aa" FT /note="Fasta hit to KDGR_ECOLI (263 aa), 31% identity in FT 260 aa overlap" FT /note="Fasta hit to YBBU_ECOLI (271 aa), 31% identity in FT 252 aa overlap" FT /note="Fasta hit to ICLR_ECOLI (274 aa), 34% identity in FT 226 aa overlap" FT /note="Fasta hit to YJHI_ECOLI (262 aa), 32% identity in FT 219 aa overlap" FT /note="Fasta hit to YAGI_ECOLI (252 aa), 34% identity in FT 251 aa overlap" FT /note="Orthologue of E. coli yiaJ (YIAJ_ECOLI); Fasta hit FT to YIAJ_ECOLI (282 aa), 91% identity in 266 aa overlap" FT /db_xref="GOA:Q8Z2C4" FT /db_xref="InterPro:IPR014757" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C4" FT /protein_id="CAD07961.1" FT /translation="MSQNNDKEKPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLN FT KSTVHRLLQGLQSCGYVTPAPAAGSYRLTTKFIAVGQKALSSLNIIHVAAPHLEALNLA FT TGETVNFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGQPDYVA FT SYWESHKDQIQPLTRNTITDLPAMYDELAQIRETSMAMDREENELGVSCIAVPVFDIHH FT RVPYAISISLSTSRLKQIGEKNLLKPLRETAQAISNELGFTVRE" FT misc_feature 20671..21237 FT /note="Pfam match to entry PF01614 IclR, Bacterial FT transcriptional regulator, score 298.50, E-value 8e-86" FT RBS 21370..21373 FT /note="possible RBS" FT CDS 21378..21851 FT /transl_table=11 FT /gene="STY4132" FT /product="putative electron-transport protein" FT /note="Similar to e.g. Salmonella typhimurium LT2 FT thiosulfate reductase electron transport protein PhsB phsB FT SW:PHSB_SALTY (P37601) (192 aa) fasta scores: E(): 2.2e-16, FT 38.2% id in 157 aa, and to Rhodospirillum rubrum FT iron-sulfur protein cooF SW:COOF_RHORU (P31894) (190 aa) FT fasta scores: E(): 6.2e-16, 39.9% id in 158 aa" FT /note="Fasta hit to HYFA_ECOLI (205 aa), 37% identity in FT 185 aa overlap" FT /note="Fasta hit to YGFS_ECOLI (162 aa), 47% identity in FT 154 aa overlap" FT /note="Fasta hit to HYDN_ECOLI (175 aa), 61% identity in FT 162 aa overlap" FT /note="Fasta hit to HYCB_ECOLI (203 aa), 40% identity in FT 181 aa overlap" FT /note="Orthologue of E. coli YSAA_ECOLI; Fasta hit to FT YSAA_ECOLI (157 aa), 72% identity in 156 aa overlap" FT /db_xref="GOA:Q8Z2C3" FT /db_xref="HSSP:1KQF" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C3" FT /protein_id="CAD07962.1" FT /translation="MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVTTADFVPRIR FT VIKEDSFTTATVCHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGAM FT TVVASASGAQAIKCDLCWHREAGPACVEACPTSALQCVDATHVQRQRLYSQPF" FT misc_feature 21621..21692 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 35.20, E-value 1.5e-06" FT misc_feature 21642..21677 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT CDS complement(21888..23138) FT /transl_table=11 FT /gene="STY4133" FT /gene_synonym="avtA" FT /product="valine--pyruvate aminotransferase" FT /EC_number="2.6.1.66" FT /note="Orthologue of E. coli avtA (AVTA_ECOLI); Fasta hit FT to AVTA_ECOLI (417 aa), 92% identity in 415 aa overlap" FT /db_xref="GOA:Q8Z2C2" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C2" FT /protein_id="CAD07963.1" FT /translation="MTFSLFGDKFTRHSGITRLMEDLNDGLRTPGAIMLGGGNPAHIPA FT MQDYFQTLLTEMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTN FT GSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG FT QFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYG FT VPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIANDKTITAIANMNGIISLAP FT GGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIF FT LWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIE FT AGVKILAEEIERAWREG" FT CDS complement(23312..25339) FT /transl_table=11 FT /gene="STY4134" FT /gene_synonym="malS" FT /product="alpha-amylase" FT /EC_number="3.2.1.1" FT /note="Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit FT to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. FT Contains a probable N-terminal signal sequence" FT /db_xref="GOA:Q8Z2C1" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C1" FT /protein_id="CAD07964.1" FT /translation="MKLAAFALTLIPGIAIASSWTSPGFPTLSTQETGRFTSHAALTKG FT TRALTLHIDQQCWQPSGAIKLNQMLSLKPCEGAPPQWRLFKDGDYTITVDTRSGTPTLL FT LSIKTEPERTTQLAYQCPVWDGSPLTLDVRQTFPEGTVVRDYYSGQIDTVQNGKITLLP FT ADSHGLLLLERAETHASAPFNWRNATVYFVLTDRFRNGDPTNDHSYGRHKDGMQEIGTF FT HGGDLRGLTSQLDYLQQLGVNALWISSPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTT FT LDANMGSEADLRALVDGAHQRGIRILFDVVMNHAGYATLADMQEYQFGALYLSGAERQK FT ILGDRWTNWRPAAGQSWHSFNDYINFSDSAAWEKWWGKKWIRTDIGDYDSPGFDDLTLS FT LAFLPDIKTESTTPSGLPVFYANKPDTKAKFIEGYTPRDYLTHWLSQWVHDYGIDGFRI FT DTAKNVELPAWQQLKTQASAALHEWKQANPDKALDDSPFWMTGEAWGHGVMKSDYYRYG FT FDAMINFDYQEQAAKAVDCLAEMGPVWQQMADKMQDFNVLSYLSSHDTRLFREGGDKAA FT ELLLLSPGAVQIFYGDESARPFGPTGSDPLQGTRSDMNWQDVSGKSAAAVAHWQRISQF FT RARHPAIGAGQQTTLTLKHGYGFVRQYGDDTVMVVWAGRR" FT misc_feature complement(23363..24775) FT /note="Pfam match to entry PF00128 alpha-amylase, Alpha FT amylase, score 291.10, E-value 1.4e-83" FT RBS complement(25347..25351) FT /note="possible RBS" FT RBS 25645..25649 FT /note="possible RBS" FT CDS 25655..26479 FT /transl_table=11 FT /gene="STY4135" FT /gene_synonym="bax" FT /product="putative exported amidase" FT /note="Orthologue of E. coli BAX_ECOLI; Fasta hit to FT BAX_ECOLI (274 aa), 89% identity in 274 aa overlap. FT Contains a probable N-terminal signal sequence" FT /db_xref="GOA:Q8Z2C0" FT /db_xref="InterPro:IPR002901" FT /db_xref="UniProtKB/TrEMBL:Q8Z2C0" FT /protein_id="CAD07965.1" FT /translation="MILTPMRRYGAMILMLLTIAFSGEVLAKTRATQTSQKSHITETSY FT KQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITADRNWLIS FT KQYQNRWSPSERARMKDIAKRYKVSWSGNTRRIPWNTLLERVDIIPTSMVATMAAAESG FT WGTSKLARSNNNLFGMKCTKGRCTNTPGKVKGYSQFASVEESVSAYVANLNTHPAYSSF FT RKSRAQLRKADQEVTATAMIHKLKGYSTQGARYNNYLFAMYQDNQRLIAAHM" FT misc_feature 26036..26458 FT /note="Pfam match to entry PF01832 Amidase_4, FT N-acetylmuramoyl-L-alanine amidase, score 148.70, E-value FT 1e-40" FT CDS complement(26540..27718) FT /transl_table=11 FT /gene="STY4136" FT /gene_synonym="xylR" FT /product="xylose operon regulatory protein" FT /note="Orthologue of E. coli xylR (XYLR_ECOLI); Fasta hit FT to XYLR_ECOLI (392 aa), 92% identity in 392 aa overlap" FT /db_xref="GOA:Q8Z2B9" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q8Z2B9" FT /protein_id="CAD07966.1" FT /translation="MFDKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF FT RARIDNIKEWLGDGVIADYDDDDIAQLLADVDVPIVGVGGSYHLAENYPAVHYIATDNH FT ALVESAFLHLKEKGVNRFAFYGLPDSSRKHWAAEREYAFRQLVAEEKYRGVVYQGLETA FT PENWQHAQNRLADWLQTLPPQTGIIAVTDARARHVLQACEHLHIPVPEKLCVIGIDNEE FT LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLAREEMPLQRILVPPVRVIARRSTDYRS FT LTDPAVIQAMHFIRNHACKGIKVEQVLDAVGISRSNLEKRFKEEVGETIHALIHAEKLE FT KARSLLISTTLAINEISQMCGYPSLQYFYSVFKKEYVTTPKEYRDQHSEALL" FT misc_feature complement(26558..26818) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 125.10, E-value 1.3e-33" FT RBS 28071..28074 FT /note="possible RBS" FT CDS 28081..29403 FT /transl_table=11 FT /gene="STY4137" FT /gene_synonym="xylA" FT /product="D-xylose isomerase" FT /EC_number="5.3.1.5" FT /note="Orthologue of E. coli xylA (XYLA_ECOLI); Fasta hit FT to XYLA_ECOLI (440 aa), 92% identity in 440 aa overlap" FT /db_xref="GOA:Q7C637" FT /db_xref="HSSP:1A0D" FT /db_xref="InterPro:IPR018115" FT /db_xref="UniProtKB/Swiss-Prot:Q7C637" FT /protein_id="CAD07967.1" FT /translation="MQAYFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRFA FT ACYWHTFCWNGADMFGVGAFNRPWQQPGEALELAKRKADVAFEFFHKLNVPFYCFHDVD FT VSPKGASLKEYKNNFAQMVDVLAAKQEQSGVKLLWGTANCFTNPRYGAGAATNPDPEVF FT SCAATQVVTAMNATHKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHK FT MGFQGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHH FT EIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDA FT KVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQIL FT KGQLSLGELAQYAEQHHLAPVHQSGHQELLENLVNRYLFDK" FT misc_feature 28165..29391 FT /note="Pfam match to entry PF00259 Xylose_isom, Xylose FT isomerase, score 886.80, E-value 6.6e-263" FT misc_feature 28378..28407 FT /note="PS00173 Xylose isomerase signature 2" FT misc_feature 28771..28794 FT /note="PS00172 Xylose isomerase signature 1" FT RBS 29489..29493 FT /note="possible RBS" FT CDS 29503..30957 FT /transl_table=11 FT /gene="STY4138" FT /gene_synonym="xylB" FT /product="xylulose kinase" FT /EC_number="2.7.1.17" FT /note="Orthologue of E. coli xylB (XYLB_ECOLI); Fasta hit FT to XYLB_ECOLI (484 aa), 86% identity in 484 aa overlap" FT /db_xref="GOA:Q8Z2B7" FT /db_xref="InterPro:IPR018485" FT /db_xref="UniProtKB/TrEMBL:Q8Z2B7" FT /protein_id="CAD07968.1" FT /translation="MYIGIDLGTSGVKAILLNEQGDVLATYTEKLTVSRPHPLWSEQEP FT EQWWQATDRAVKGLGRQQSLSGVRALGIAGQMHGATLLDSRQQVLRPAILWNDGRCSEE FT CAWLEKQVPQSRAITGNLMMPGFTAPKLVWVQRHEPDIFYQIDKVLLPKDFLRLRMTGV FT FASDMSDAAGTMWLDVKKRDWSDVMLNACHLTRQQMPALFEGSDITGTLLPEVASAWGM FT PAVPVVAGGGDNAAGAVGVGMIDAGQAMLSLGTSGVYFAVSDGFLSKPESAVHSFCHAL FT PERWHLMSVMLSAASCLDWAAKLTGQENVPALIAAAQQADEHADSIWFLPYLSGERTPH FT NNPQAKGVFFGLTHQHGPAELARAVLEGVGYALADGMDVVHACGVKPASVTLIGGGARS FT EYWRQMLSDISGLQLDYRTGGDVGPALGAARLAQIAVNKQTPLADVLPQLPLEQAHYPD FT AQRHAVYQQRRETFRRLYQQLLPLMS" FT misc_feature 29713..30789 FT /note="Pfam match to entry PF00370 FGGY, FGGY family of FT carbohydrate kinases, score 614.50, E-value 6.1e-181" FT misc_feature 29878..29916 FT /note="PS00933 FGGY family of carbohydrate kinases FT signature 1" FT misc_feature 30541..30603 FT /note="PS00445 FGGY family of carbohydrate kinases FT signature 2" FT RBS 31120..31125 FT /note="possible RBS" FT CDS 31132..31485 FT /transl_table=11 FT /gene="STY4139" FT /gene_synonym="yiaB" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yiaB (YIAB_ECOLI); Fasta hit FT to YIAB_ECOLI (117 aa), 35% identity in 95 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="InterPro:IPR008024" FT /db_xref="UniProtKB/TrEMBL:Q8Z2B6" FT /protein_id="CAD07969.1" FT /translation="MDDHVARRKRIFGLGMLVVGAVVYLVGLWPGCHTLSEKGYFFAAI FT VMCGFPVLIRQEHTGNDRLLSRCKSLLLLGIGMVAVGVFNLALAGALKILCLVALGVSI FT YGTDLYASYSDDE" FT CDS complement(31508..32502) FT /pseudo FT /transl_table=11 FT /gene="yiaH" FT /gene_synonym="STY4140" FT /product="putative membrane protein (pseudogene)" FT /note="Similar to Escherichia coli hypothetical protein FT YiaH SW:YIAH_ECOLI (P37669) (331 aa) fasta scores: E(): 0, FT 78.0% id in 218 aa. Contains hydrophobic, probable FT membrane-spanning regions. Contains a frameshift after FT codon 65. The sequence has been checked and is believed to FT be correct" FT RBS complement(32508..32511) FT /note="possible RBS" FT CDS 32668..32970 FT /transl_table=11 FT /gene="STY4142" FT /product="putative lipoprotein" FT /note="Unknown function. Contains a possible N-terminal FT signal sequence" FT /db_xref="GOA:Q8Z2B5" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z2B5" FT /protein_id="CAD07971.1" FT /translation="MIMKYFCTVMIAIALVGCTATPPPTQKAQQSKVSPTRTLDMEALC FT KAQAAQRYNTGAQKIAVTGFEQFQGSYEMRGNTFRKESFVCSFDADGQFLHLSMR" FT misc_feature 32689..32721 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS 33109..34020 FT /transl_table=11 FT /gene="STY4143" FT /gene_synonym="glyQ" FT /product="glycine-tRNA synthetase, alpha subunit" FT /EC_number="6.1.1.14" FT /note="Orthologue of E. coli glyQ (SYGA_ECOLI); Fasta hit FT to SYGA_ECOLI (303 aa), 99% identity in 303 aa overlap" FT /db_xref="GOA:Q8Z2B4" FT /db_xref="HSSP:1J5W" FT /db_xref="InterPro:IPR002310" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z2B4" FT /protein_id="CAD07972.1" FT /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTC FT LRALGPEPMATAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPENIQELYLGSLKE FT LGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKLVTGEI FT TYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTC FT FEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTK FT AVAEAYYASREALGFPMCNKDK" FT misc_feature 33133..34002 FT /note="Pfam match to entry PF02091 tRNA_synt_2e, FT Glycyl-tRNA synthetase alpha subunit, score 828.30, E-value FT 2.6e-245" FT misc_feature 33598..33627 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2" FT RBS 34021..34024 FT /note="possible RBS" FT CDS 34030..36099 FT /transl_table=11 FT /gene="STY4144" FT /gene_synonym="glyS" FT /product="glycine-tRNA synthetase, beta subunit" FT /EC_number="6.1.1.14" FT /note="Orthologue of E. coli glyS (SYGB_ECOLI); Fasta hit FT to SYGB_ECOLI (688 aa), 94% identity in 688 aa overlap" FT /db_xref="GOA:Q8Z2B3" FT /db_xref="InterPro:IPR002311" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z2B3" FT /protein_id="CAD07973.1" FT /translation="MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTV FT QWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQ FT AERLTTDKGEWLLYRAYVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHT FT VTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEER FT KAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTM FT KGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKK FT RLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMT FT NMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKM FT DTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTN FT ASVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEEA FT SALAAANKRVSNILAKATEPLNDIVHASVLKEAAEIELARHLVVLRDKLQPYFADGRYQ FT EALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADISLLQ" FT misc_feature 34045..36093 FT /note="Pfam match to entry PF02092 tRNA_synt_2f, FT Glycyl-tRNA synthetase beta subunit, score 1385.60, E-value FT 0" FT CDS 36535..36990 FT /pseudo FT /transl_table=11 FT /gene="STY4146" FT /product="putative transposase (pseudogene)" FT /note="Similar to regions of Escherichia coli putative FT transposase for insertion sequence IS150 SW:T150_ECOLI FT (P19769) (283 aa) blastp score = 451 (158.8 bits), Expect = FT 1.2e-42 and Escherichia coli insertion sequence IS1397 ORF FT TR:Q47310 (EMBL:X92970) (240 aa) blastp score = 378 (133.1 FT bits), Expect = 6.5e-35" FT misc_feature 36541..36720 FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 15.70, E-value 0.0022" FT misc_feature 36772..36969 FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 45.20, E-value 6.7e-12" FT RBS 37127..37130 FT /note="possible RBS" FT CDS 37135..37602 FT /transl_table=11 FT /gene="STY4148" FT /gene_synonym="yafP" FT /product="putative acetyltransferase" FT /note="Similar to e.g. Escherichia coli hypothetical FT protein YafP yafP SW:YAFP_ECOLI (Q47158) (150 aa) fasta FT scores: E(): 4.6e-12, 34.4% id in 151 aa and Salmonella FT typhimurium orf X protein from plasmid inclL/M TR:O86935 FT (EMBL:AJ009820) (176 aa) fasta scores: E(): 1e-11, 31.4% id FT in 153 aa" FT /db_xref="GOA:Q8XFA9" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q8XFA9" FT /protein_id="CAD07975.1" FT /translation="MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADIDL FT ERWANHIKELQPFVVELDGEIAGYADVQPNGYIDHFFVSGTYSRQGVGTLLMNCIHEEA FT RQRGISELTSNVSKAAEVFFLRHGFHIVERGFPICRGVTLQNALMRKCLAK" FT misc_feature 37318..37524 FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 42.30, E-value FT 1.1e-08" FT CDS 37780..38067 FT /transl_table=11 FT /gene="STY4150" FT /product="conserved hypothetical protein" FT /note="Similar to C-terminal region of Mycobacterium FT tuberculosis hypothetical protein Rv0918 TR:O05910 FT (EMBL:Z95210) (158 aa) fasta scores: E(): 1.6e-05, 37.8% id FT in 82 aa" FT /db_xref="InterPro:IPR014795" FT /db_xref="UniProtKB/TrEMBL:Q8Z2B2" FT /protein_id="CAD07976.1" FT /translation="MLYKGCLMKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILETA FT CRAAENVILDRRVFNFNDEQYEEFINLLDAPVADDPVIEKLLARKPQWDV" FT RBS 38043..38047 FT /note="possible RBS" FT CDS 38055..38540 FT /transl_table=11 FT /gene="STY4151" FT /product="putative acetyltransferase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv0919 TR:O05911 (EMBL:Z95210) (166 aa) fasta FT scores: E(): 8.5e-29, 50.3% id in 153 aa and Escherichia FT coli ORF79 protein from plasmid pB171 TR:Q9S0Z0 FT (EMBL:AB024946) (176 aa) fasta scores: E(): 1.2e-08, 28.1% FT id in 135 aa" FT /db_xref="GOA:Q8Z2B1" FT /db_xref="UniProtKB/TrEMBL:Q8Z2B1" FT /protein_id="CAD07977.1" FT /translation="MGRVTAPEPLSAFHQVAEFVSGEAVLDDWLKQKGLKNQALGAART FT FVVCKKDTKQVAGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDLSFHGKGLG FT ADLLHDAVLRCYRVAENIGVRAIMVHALTEDAKNFYIHHGFKSSQTQQRTLFLRLPQ" FT misc_feature 38208..38492 FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 16.90, E-value 0.13" FT CDS complement(38911..39450) FT /transl_table=11 FT /gene="STY4152" FT /product="putative exported protein" FT /note="Unknown function. Contains a probable N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z2B0" FT /protein_id="CAD07978.1" FT /translation="MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTI FT DQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGDKFYLSFAPYEWRTHPCFNHSLSGC FT QGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTASHAI FT ATRDDSQTCLTELPLR" FT CDS complement(39626..39838) FT /transl_table=11 FT /gene="cspA" FT /gene_synonym="STY4153" FT /product="cold shock protein" FT /note="Similar to Salmonella typhimurium cold shock protein FT a cspA TR:AAC06036 (EMBL:AF052579) (70 aa) fasta scores: FT E(): 5.9e-28, 100.0% id in 70 aa, and to Salmonella FT enteritidis cold shock protein cspA TR:AAB69447 FT (EMBL:AF017276) (70 aa) fasta scores: E(): 5.9e-28, 100.0% FT id in 70 aa, and to Escherichia coli cold shock protein FT CspA cspA SW:CSPA_ECOLI (P15277) (69 aa) fasta scores: E(): FT 1.9e-27, 100.0% id in 69 aa" FT /note="Similar to Salmonella typhimurium LT2 cold shock FT protein CspA cspA SW:CSPA_SALTY (P37410) (69 aa) fasta FT scores: E(): 7.3e-27, 98.6% id in 69 aa" FT /note="Fasta hit to CSPC_ECOLI (68 aa), 70% identity in 67 FT aa overlap" FT /note="Fasta hit to CSPH_ECOLI (70 aa), 49% identity in 67 FT aa overlap" FT /note="Fasta hit to CSPD_ECOLI (74 aa), 53% identity in 61 FT aa overlap" FT /note="Fasta hit to CSPI_ECOLI (70 aa), 70% identity in 70 FT aa overlap" FT /note="Fasta hit to CSPE_ECOLI (68 aa), 70% identity in 67 FT aa overlap" FT /note="Fasta hit to CSPF_ECOLI (70 aa), 46% identity in 67 FT aa overlap" FT /note="Fasta hit to CSPB_ECOLI (71 aa), 84% identity in 67 FT aa overlap" FT /note="Fasta hit to CSPG_ECOLI (70 aa), 73% identity in 70 FT aa overlap" FT /note="Orthologue of E. coli cspA (CSPA_ECOLI); Fasta hit FT to CSPA_ECOLI (69 aa), 100% identity in 69 aa overlap" FT /db_xref="GOA:P0A9Y3" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/Swiss-Prot:P0A9Y3" FT /protein_id="CAD07979.1" FT /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSL FT DEGQKVSFTIESGAKGPAAGNVTSL" FT misc_feature complement(39629..39829) FT /note="Pfam match to entry PF00313 CSD, 'Cold-shock' FT DNA-binding domain, score 153.80, E-value 3e-42" FT misc_feature complement(39728..39787) FT /note="PS00352 'Cold-shock' DNA-binding domain signature" FT CDS complement(40051..40458) FT /transl_table=11 FT /gene="STY4154" FT /product="putative DNA-binding protein" FT /note="Similar to Escherichia coli hypothetical protein FT YiaG yiaG SW:YIAG_ECOLI (P37668) (96 aa) fasta scores: E(): FT 7.4e-27, 79.2% id in 96 aa. Contains helix-turn-helix FT motif, residues 61 to 82, score 1190 (+3.24 SD)." FT /db_xref="GOA:Q8Z2A9" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A9" FT /protein_id="CAD07980.1" FT /translation="MHFTIPLCDLQEFSMEYKDPMFELLSSLEQIVFKDETRKITLTQK FT PNPFTEFEQLRRGTGLKTDEFARALGVTVAMVQEWESKREKPTPAELKLMRLIQANPRL FT SKQLMEQFLPLSVLTVLRKGRFPRPITGLEK" FT RBS 40841..40846 FT /note="possible RBS" FT CDS 40855..41565 FT /transl_table=11 FT /gene="STY4155" FT /gene_synonym="yiaF" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yiaF (YIAF_ECOLI); Fasta hit FT to YIAF_ECOLI (276 aa), 86% identity in 256 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8XFE4" FT /protein_id="CAD07981.1" FT /translation="MATGKSCSRWFAPVVALLMVFSLSGCFDKEGDQRKAFVDFLQNTA FT MRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDY FT MTQREPLRQANGSLGVLAQQLQNAKLQADAAHGALKQADDLKPVFDQVYKKVVTVPADA FT LQPLIPAAQIFTQQLVQVGDYIAQQGEQVSFVANGIQFPTSQQASQYNALIGPLASQHQ FT AFNQAWTAAVNATQ" FT CDS complement(41615..42589) FT /transl_table=11 FT /gene="STY4156" FT /gene_synonym="yiaE" FT /product="putative 2-hydroxyacid dehydrogenase" FT /note="Similar to e.g. Homo sapiens glyoxylate reductase FT grhpR TR:Q9UBQ7 (EMBL:AF134895) (328 aa) fasta scores: E(): FT 0, 39.9% id in 296 aa and Hyphomicrobium methylovorum FT hydroxypyruvate reductase TR:Q59463 (EMBL:D31857) (322 aa) FT fasta scores: E(): 2.6e-29, 34.0% id in 321 aa" FT /note="Orthologue of E. coli yiaE (YIAE_ECOLI); Fasta hit FT to YIAE_ECOLI (324 aa), 83% identity in 323 aa overlap" FT /db_xref="GOA:Q8Z2A8" FT /db_xref="HSSP:1GDH" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z2A8" FT /protein_id="CAD07982.1" FT /translation="MKPSIILYKTLPDDLLHRLEAHFTVTQVPNLHPETVARHAQAFAS FT AQGLLGTSETVNRALLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVA FT DTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQR FT AHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQ FT FARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVV FT AVPHIGSATHETRYNMMACAVDNLIDALQGKIEKNCVNPQAAG" FT misc_feature complement(41735..42364) FT /note="Pfam match to entry PF00389 2-Hacid_DH, D-isomer FT specific 2-hydroxyacid dehydrogenases, score 337.40, FT E-value 7.3e-138" FT misc_feature complement(41864..41914) FT /note="PS00671 D-isomer specific 2-hydroxyacid FT dehydrogenases signature 3" FT misc_feature complement(41933..42001) FT /note="PS00670 D-isomer specific 2-hydroxyacid FT dehydrogenases signature 2" FT RBS complement(42596..42599) FT /note="possible RBS" FT CDS complement(42808..43470) FT /transl_table=11 FT /gene="STY4157" FT /gene_synonym="yiaD" FT /product="putative outer membrane protein" FT /note="Orthologue of E. coli yiaD (YIAD_ECOLI); Fasta hit FT to YIAD_ECOLI (219 aa), 95% identity in 219 aa overlap. FT Contains a possible N-terminal signal sequence; may be a FT lipoprotein" FT /db_xref="GOA:Q8XFE2" FT /db_xref="InterPro:IPR006690" FT /db_xref="UniProtKB/TrEMBL:Q8XFE2" FT /protein_id="CAD07983.1" FT /translation="MKKRVFVIAAIVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLV FT GAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGD FT NIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMR FT LSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSPLQ" FT misc_feature complement(42841..43128) FT /note="Pfam match to entry PF00691 OmpA, OmpA family, score FT 163.30, E-value 4e-45" FT misc_feature complement(42895..43029) FT /note="PS01068 OmpA-like domain" FT misc_feature complement(43366..43389) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(43408..43440) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS complement(43477..43482) FT /note="possible RBS" FT CDS 43623..45956 FT /transl_table=11 FT /gene="bisC" FT /gene_synonym="STY4158" FT /product="biotin sulfoxide reductase" FT /EC_number="1.-.-.-" FT /note="Similar to Escherichia coli biotin sulfoxide FT reductase 1 bisC SW:BISC_ECOLI (P20099) (777 aa) fasta FT scores: E(): 0, 85.5% id in 777 aa" FT /db_xref="GOA:Q8Z2A7" FT /db_xref="HSSP:4DMR" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A7" FT /protein_id="CAD07984.1" FT /translation="MTHAPSRHSVLTAAHWGPVRVETDGERIFASYGELPTAHQNSLQT FT VVHDQVHSKTRVRFPMVRKGFLASPDKPQGIRGQDEFVRVSWDDALDLIHAQHKRIRES FT YGPSSIFAGSYGWRSNGVLHKAATLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGN FT EVYQQQTSWPVVLEHSEVVVLWSANPLNTLKIAWNASDEQGLDYFAALRQSGKRLICID FT PMRSESVDFFGDKMEWIAPHMGTDVALMLGIAHTLVENGWQDEAFLARCTTGYDRFADY FT LLGTTDGTAKTAEWAAEICGVSAVKIRELAEIFHHNTTMLMAGWGMQRQQFGEQKHWMI FT VTLAAMLGQIGTPGGGFGFSYHFANGGNPTRRAAVLASIQGSIPGGVDAVDKIPVARIV FT EALENPGGFYQHNGMDRRFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFW FT TAAAKHADIVLPATTSYERNDLTMTGDYSNQHLAPMKQVVSPRWEARNDFDVFAELSER FT WEAGGYARFTEGKSELAWLETFYNIAAQRGASQGVTLPPFAAFWQANRLLEMPENPANA FT QFVRFADFRRDPDNHPLKTASGKIEIYSARIASYGYADCPGHPMWLAPDEWHGNADAGQ FT VQLLSAHPAHRLHSQLNYSSLRERYAVAGREPVTIHPQDATTRGIVDGDTVRVWNHRGQ FT VLAGAVVTDGIRPGVICIHEGAWPDPEPTAGGICKNGAVNVLTKDLPSSRLGNGCAGNT FT ALVWFEKYTGPALPLTAFDPPANS" FT misc_feature 44970..45167 FT /note="Pfam match to entry PF00384 molybdopterin, FT Prokaryotic molybdopterin oxidoreductases, score 132.00, FT E-value 2.9e-42" FT misc_feature 44997..45050 FT /note="PS00490 Prokaryotic molybdopterin oxidoreductases FT signature 2" FT misc_feature 45192..45215 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 45528..45887 FT /note="Pfam match to entry PF01568 Molydop_binding, FT Molydopterin dinucleotide binding domain, score 166.60, FT E-value 4.1e-46" FT misc_feature 45645..45728 FT /note="PS00932 Prokaryotic molybdopterin oxidoreductases FT signature 3" FT CDS complement(45925..46365) FT /transl_table=11 FT /gene="STY4159" FT /gene_synonym="yiaC" FT /product="putative acetyltransferase" FT /note="Fasta hit to YJAB_ECOLI (147 aa), 34% identity in FT 134 aa overlap" FT /note="Orthologue of E. coli yiaC (YIAC_ECOLI); Fasta hit FT to YIAC_ECOLI (146 aa), 60% identity in 145 aa overlap" FT /db_xref="GOA:Q8Z2A6" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A6" FT /protein_id="CAD07985.1" FT /translation="MIRKSQSEDMASILALWMKSTIYAHPFIEERYWHESEAIVRDVYL FT PAAQTWVWEENGQLKGFVSVLEARFVGALFVAPDALRHGIGKALLEYVQQRFPLLSLEV FT YQKNQSAVNFYHALGFRIEDSAWQEDTSHPTWIMSWQADQTP" FT misc_feature complement(46003..46203) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 59.30, E-value FT 8.2e-14" FT CDS complement(46343..46924) FT /transl_table=11 FT /gene="STY4160" FT /gene_synonym="tag" FT /product="3-methyladenine DNA glycosylase I, constitutive" FT /note="Orthologue of E. coli tag (3MG1_ECOLI); Fasta hit to FT 3MG1_ECOLI (187 aa), 85% identity in 186 aa overlap" FT /db_xref="GOA:Q8Z2A5" FT /db_xref="InterPro:IPR005019" FT /db_xref="PDB:2OFI" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A5" FT /protein_id="CAD07986.1" FT /translation="MQRCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLS FT WITVLKKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNARAWLA FT MEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTTICY FT SFMQACGLVNDHITGCFCHPGEKHDSQIPE" FT RBS complement(46372..46375) FT /note="possible RBS" FT RBS complement(46928..46933) FT /note="possible RBS" FT RBS 47069..47072 FT /note="possible RBS" FT CDS 47081..47785 FT /transl_table=11 FT /gene="STY4161" FT /gene_synonym="yhjY" FT /product="putative membrane protein" FT /note="Similar to the C-terminal halves of Salmonella FT typhimurium outer membrane esterase apeE TR:O52756 FT (EMBL:AF047014) (656 aa) fasta scores: E(): 4.3e-12, 26.5% FT id in 234 aa and Photorhabdus luminescens lipase 1 FT precursor lip-1 SW:LIP1_PHOLU (P40601) (645 aa) fasta FT scores: E(): 1.4e-11, 28.0% id in 150 aa. Contains an FT hydrophobic, possible membrane-spanning region" FT /note="Orthologue of E. coli yhjY (P76714); Fasta hit to FT P76714 (234 aa), 72% identity in 235 aa overlap" FT /db_xref="InterPro:IPR016955" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A4" FT /protein_id="CAD07987.1" FT /translation="MIVRKRRGRRTLRCLAGLMACSFFINTTYAWQQEYIAEAAPGHTT FT ERYTWDSDHQPNYNDILAERIQSTQNTVGPVLSLADETPLDATSGISMGWNFSLSRRVT FT TGPVAALHYDGSTSSMYNEYGDSATTLALTDPLWHASVSTLGWRVNSQFGDVRPWAQIS FT YNQQFGENIWKAQSGLSRMTAGNQAGNWLDVTVGADVLLNPHLAAYAAFSQAENSATDS FT DYLYTLGVSARF" FT CDS 48016..49647 FT /transl_table=11 FT /gene="STY4162" FT /gene_synonym="yhjW" FT /product="putative membrane protein" FT /note="Similar to Salmonella typhimurium ATCC 14028 protein FT (fragment) SW:YHJW_SALTY (P43666) (295 aa) fasta scores: FT E(): 0, 98.6% id in 277 aa. N-terminus contains FT hydrophobic, probable membrane-spanning regions" FT /note="Orthologue of E. coli yhjW (YHJW_ECOLI); Fasta hit FT to YHJW_ECOLI (574 aa), 85% identity in 562 aa overlap" FT /db_xref="GOA:Q8Z2A3" FT /db_xref="InterPro:IPR017849" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A3" FT /protein_id="CAD07988.1" FT /translation="MRYIKSMTQQKLSFLLALYIGLFMNCAVFYRRFGSYAQEFTIWKG FT LSAVVELGATVLVTFFLLRLLSLFGRRVWRVLATLVVLFSAGASYYMTFLNVVIGYGII FT ASVMTTDIDLSKEVVGLHFVLWLIAVSVLPLIFIWSNHCRYTLLRQLRTPGQRFRSAAV FT VILAGVMVWAPIRLLDVQQKKFERATGIDLPSYGGVVANSYLPSNWLSALGLYAWAQVD FT ESSDNNSLINPARKFTYVAPKDGDDTYVVFIIGETTRWDHMGIFGYERNTTPKLSLRCM FT FVREGGADNNPQRTLKEQNVFAVLKQLGFSSDLYAMQSEMWFYSNTMADNISYREQIGA FT EPRNRGKTVDDMLLIDEMQNSLAQNPEGKHLIILHTKGSHFNYTQRYPRSYAQWKPECI FT GVDSGCTKAQMINSYDNSVTYVDHFITSVFDQLRDKKAIVFYAADHGESINEREHLHGT FT PRNMAPPEQFRVPMLVWMSDKYLASPQHAQMSAHLKQQAEIKVPRRHVELYDTIMGCLG FT YTSPNGGINQNNNWCHIPDAQKVAAK" FT tRNA 49738..49814 FT /note="tRNA Pro anticodon CGG, Cove score 85.13" FT CDS complement(49831..49962) FT /transl_table=11 FT /gene="STY4163" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A2" FT /protein_id="CAD07989.1" FT /translation="MTEDDLPLRAVADATFSRFARVEPLAPGGSHPRQASDTKNPAR" FT CDS complement(49959..50966) FT /transl_table=11 FT /gene="STY4164" FT /product="putative lacI-family transcriptional regulator" FT /note="Similar to many e.g. Streptomyces reticuli CebR FT protein cebR TR:Q9X9R3 (EMBL:AJ009798) (350 aa) fasta FT scores: E(): 5.1e-16, 29.0% id in 341 aa, and to FT Thermomonospora fusca transcription regulator CelR celR FT SW:CELR_THEFU (O87590) (340 aa) fasta scores: E(): 1.2e-15, FT 26.9% id in 346 aa" FT /db_xref="GOA:Q8Z2A1" FT /db_xref="HSSP:1LCC" FT /db_xref="InterPro:IPR000843" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A1" FT /protein_id="CAD07990.1" FT /translation="MAVQNKKRAKLIDVARHAGVSPGTVSNALHNTRFVEPQTRRRIEE FT AIVALNYTPNIRARQLRTGKTNTIALLSSVPLAIASGASRLGFMMEVALTSAMMALEKQ FT HALILVPPGVNPLDAVSFDAAILIEPAENDPQLQALAQAGIPCVTIGRTPGTDTPVPWV FT ELHSAATAQLLLTHLEASGASKCALFVGNTRRTSVLESEAAYQRWCAGRQDPVVYSLNE FT SEGENAGYQAAQQLLQAHPDVDGVLVLIDTFASGAVRAFQEQDIAIPEQIRVVTRYDGI FT RARESLPPLTAVNMHLDEVARQAITLLFAVLSGEKVSYSDGIMPELVVRASTCR" FT misc_feature complement(50055..50774) FT /note="Pfam match to entry PF00532 Peripla_BP_like, FT Periplasmic binding proteins and sugar binding domain of FT the LacI family., score 12.00, E-value 2.9e-06" FT misc_feature complement(50865..50948) FT /note="Pfam match to entry PF00356 lacI, Bacterial FT regulatory proteins, lacI family, score 30.80, E-value FT 3.7e-07" FT misc_feature complement(50880..50936) FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature" FT RBS 51106..51111 FT /note="possible RBS" FT CDS 51116..52240 FT /transl_table=11 FT /gene="STY4165" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z2A0" FT /protein_id="CAD07991.1" FT /translation="MAHLTQDSTFTLGRRPAGLIYADKAKSFGGYTLFAPQTAEGRVYL FT VDEQGEVAHQWQLPVRAGRDAVLLPNGNLGYNGSHRTSANLYPAWDLWHGGDFYEVTPD FT NEIVWHYEDIYHHHDAQWLANGNLLYTAASPLPADIAARVTGGDPRRDAPDGVIQSDVV FT KEVNRDGEVVWEWRAWEHLNPEDFPIHDIFDRRHWPMINGLSVTRDGLVLMSLRTTSGV FT IAVDKESGKVIWHAGPEVVAQQHTPVEMENGSILVFDNGNLRPGVTSPHSTVLEFDPQI FT KAITWQYRDIFPPAFFSPYMGSAQRLANGNTFICESAFGRLFEVTPEGETVWEYIIPFF FT NEYPEHLSKGIIPGKQNSAFRAHRYAADAISWLK" FT RBS 52288..52291 FT /note="possible RBS" FT CDS 52298..53622 FT /pseudo FT /transl_table=11 FT /gene="STY4166" FT /product="putative permease (pseudogene)" FT /note="Similar to e.g. Streptomyces coelicolor putative FT permease SC9G1.04 TR:Q9RKW2 (EMBL:AL132997) (462 aa) fasta FT scores: E(): 3.1e-23, 31.1% id in 296 aa and to Bacillus FT subtilis xanthine permease pbuX SW:PBUX_BACSU (P42086) (438 FT aa) fasta scores: E(): 1.1e-17, 25.9% id in 282 aa. FT Contains hydrophobic, probable membrane-spanning regions. FT Contains a frameshift after codon 292. The sequence has FT been checked and is believed to be correct" FT RBS 54167..54170 FT /note="possible RBS" FT misc_feature 54178..55779 FT /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5, score FT 907.30, E-value 4.5e-269" FT CDS 54178..55785 FT /transl_table=11 FT /gene="STY4168" FT /gene_synonym="dppA" FT /product="periplasmic dipeptide transport protein FT precursor" FT /note="Fasta hit to SAPA_ECOLI (547 aa), 36% identity in FT 513 aa overlap" FT /note="Orthologue of E. coli dppA (DPPA_ECOLI); Fasta hit FT to DPPA_ECOLI (535 aa), 93% identity in 535 aa overlap" FT /db_xref="GOA:Q8Z299" FT /db_xref="HSSP:1DPE" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q8Z299" FT /protein_id="CAD07993.1" FT /translation="MSISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQ FT LFTSGTTYDASSVPIYNRLVEFKTGTTEVIPGLAEKWDISEDGKTYTFHLRKGVKWQSS FT KDFKPTRELNADDVVFSFDRQKNEQNPYHKVSGGSYEYFEGMGLPDLISEVKKVDDHTV FT QFVLTRPEAPFLADLAMDFASILSKEYADNMLKAGTPEKVDLNPVGTGPFQLVQYQKDS FT RILYKAFDGYWGTKPKIDRLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKEDKN FT INLMEQAGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKEAIIKAVYQGAGVAAKNLIPP FT TMWGYNDDIKDYGYDPEKAKALLKEAGLEKGFTIDLWAMPVQRPYNPNARRMAEMIQAD FT WAKIGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCDAAQQGSN FT YSKWCYKPFEDLIQPARATDDHNKRIELYKQAQVVMHDQAPALIIAHSTVYEPVRKEVK FT GYVVDPLGKHHFENVSVE" FT misc_feature 54412..54480 FT /note="PS01040 Bacterial extracellular solute-binding FT proteins, family 5 signature" FT CDS 55942..56961 FT /transl_table=11 FT /gene="STY4169" FT /gene_synonym="dppB" FT /product="dipeptide transport system permease protein DppB" FT /note="Fasta hit to YDDR_ECOLI (340 aa), 44% identity in FT 333 aa overlap" FT /note="Fasta hit to YLIC_ECOLI (306 aa), 42% identity in FT 342 aa overlap" FT /note="Fasta hit to NIKB_ECOLI (314 aa), 34% identity in FT 341 aa overlap" FT /note="Fasta hit to OPPB_ECOLI (306 aa), 36% identity in FT 340 aa overlap" FT /note="Fasta hit to SAPB_ECOLI (321 aa), 35% identity in FT 343 aa overlap" FT /note="Orthologue of E. coli dppB (DPPB_ECOLI); Fasta hit FT to DPPB_ECOLI (339 aa), 98% identity in 339 aa overlap" FT /db_xref="GOA:Q8XFC0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q8XFC0" FT /protein_id="CAD07994.1" FT /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS FT PERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISLKSRIPVWDEFVPRFKATLELGV FT CAMIFAVAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLT FT PVSGRVSDMVFLDDTNPLTGFMLIDTAIWGEEGNFIDALAHMILPAMVLGTIPLAVIVR FT MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT FT ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK" FT misc_feature 56623..56838 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 36.60, E-value 5.8e-07" FT misc_feature 56626..56712 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS 56971..57873 FT /transl_table=11 FT /gene="STY4170" FT /gene_synonym="dppC" FT /product="dipeptide transport system permease protein DppC" FT /note="Fasta hit to SAPC_ECOLI (296 aa), 40% identity in FT 288 aa overlap" FT /note="Fasta hit to YLID_ECOLI (303 aa), 42% identity in FT 284 aa overlap" FT /note="Fasta hit to NIKC_ECOLI (277 aa), 37% identity in FT 280 aa overlap" FT /note="Fasta hit to YDDQ_ECOLI (298 aa), 44% identity in FT 275 aa overlap" FT /note="Fasta hit to OPPC_ECOLI (302 aa), 34% identity in FT 285 aa overlap" FT /note="Orthologue of E. coli dppC (DPPC_ECOLI); Fasta hit FT to DPPC_ECOLI (300 aa), 94% identity in 300 aa overlap" FT /db_xref="GOA:Q8Z298" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q8Z298" FT /protein_id="CAD07995.1" FT /translation="MSQVTENNVNAAPAPMTPLREFWHYFKRNKGAVVGLAYVLIVILI FT AVFANFIAPYNPAEQFRDALLAPPVWQEGGSWAHILGTDDVGRDALSRLMYGARLSLLV FT GCLVVVLSLVMGIILGLVAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGN FT AALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFVNIFPNCLAPLIVQ FT ASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVL FT AFNLMGDGLRDALDPKLKQ" FT misc_feature 57520..57750 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 32.80, E-value 7.8e-06" FT RBS 57874..57877 FT /note="possible RBS" FT CDS 57884..58867 FT /transl_table=11 FT /gene="STY4171" FT /gene_synonym="dppD" FT /product="dipeptide transport ATP-binding protein DppD" FT /note="Fasta hit to OPPD_ECOLI (337 aa), 46% identity in FT 320 aa overlap" FT /note="Fasta hit to DPPF_ECOLI (334 aa), 36% identity in FT 306 aa overlap" FT /note="Fasta hit to SAPD_ECOLI (330 aa), 44% identity in FT 330 aa overlap" FT /note="Fasta hit to YDDO_ECOLI (308 aa), 36% identity in FT 305 aa overlap" FT /note="Fasta hit to YDDP_ECOLI (328 aa), 43% identity in FT 318 aa overlap" FT /note="Fasta hit to OPPF_ECOLI (334 aa), 38% identity in FT 317 aa overlap" FT /note="Orthologue of E. coli dppD (DPPD_ECOLI); Fasta hit FT to DPPD_ECOLI (327 aa), 95% identity in 327 aa overlap" FT /db_xref="GOA:Q8Z297" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8Z297" FT /protein_id="CAD07996.1" FT /translation="MALLNVDQLSVHFGDEGTPFKAVDRISYSVKQGEVVGIVGESGSG FT KSVSSLAIMGLIDYPGRVMAENLLFNGQDLKRISEKERRNLVGAEVAMIFQDPMTSLNP FT CYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVM FT IAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAH FT KIIVMYAGQVVETGAAQDIFRAPRHPYTQALLRALPEFAQDKARLASLPGVVPGKYDRP FT TGCLLNPRCPHATDRCRAEEPALNQLDDGRQSKCHYPLDDAGRPTL" FT misc_feature 57980..58573 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 207.80, E-value 1.6e-58" FT misc_feature 58001..58024 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 58343..58387 FT /note="PS00211 ABC transporters family signature" FT RBS 58851..58855 FT /note="possible RBS" FT CDS 58864..59877 FT /transl_table=11 FT /gene="STY4172" FT /gene_synonym="dppF" FT /product="dipeptide transport ATP-binding protein DppF" FT /note="Fasta hit to OPPD_ECOLI (337 aa), 39% identity in FT 302 aa overlap" FT /note="Fasta hit to YDDO_ECOLI (308 aa), 42% identity in FT 318 aa overlap" FT /note="Fasta hit to YDDP_ECOLI (328 aa), 34% identity in FT 333 aa overlap" FT /note="Fasta hit to OPPF_ECOLI (334 aa), 50% identity in FT 323 aa overlap" FT /note="Fasta hit to DPPD_ECOLI (327 aa), 36% identity in FT 307 aa overlap" FT /note="Orthologue of E. coli dppF (DPPF_ECOLI); Fasta hit FT to DPPF_ECOLI (334 aa), 96% identity in 334 aa overlap" FT /db_xref="GOA:Q8Z296" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8Z296" FT /protein_id="CAD07997.1" FT /translation="MSTHEATLQQPLLRAIDLKKHYPVKKGIFSPERLVKALDGVSFNL FT ERGKTLAVVGESGCGKSTLGRLLTMVETPTGGELYYQGQDLLKHDPHAQKLRRQKIQIV FT FQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALAMMAKVGLKTEHYDRYPHMFS FT GGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQDMGLSYVFISHDL FT SVVEHIADEVMVMYLGRCVEKGTKEQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTG FT ELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKEYDGQLVACFAVDQDENPQKPLS" FT misc_feature 59005..59577 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 213.50, E-value 3.1e-60" FT misc_feature 59026..59049 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 59347..59391 FT /note="PS00211 ABC transporters family signature" FT CDS complement(60187..61485) FT /transl_table=11 FT /gene="STY4173" FT /gene_synonym="yhjV" FT /product="putative amino acid permease" FT /note="Shows weak similarity to Escherichia coli serine FT transporter sdaC SW:SDAC_ECOLI (P36559) (429 aa) fasta FT scores: E(): 1.1e-24, 25.1% id in 419 aa and Escherichia FT coli low affinity tryptophan permease tnaB or trpP FT SW:TNAB_ECOLI (P23173) (415 aa) fasta scores: E(): 6.3e-05, FT 19.5% id in 420 aa. Contains hydrophobic, probable FT membrane-spannign regions" FT /note="Fasta hit to YHAO_ECOLI (425 aa), 47% identity in FT 412 aa overlap" FT /note="Orthologue of E. coli yhjV (YHJV_ECOLI); Fasta hit FT to YHJV_ECOLI (423 aa), 87% identity in 419 aa overlap" FT /db_xref="InterPro:IPR019825" FT /db_xref="UniProtKB/TrEMBL:Q8Z295" FT /protein_id="CAD07998.1" FT /translation="MQDDTLPLNNSNATTTPLSTRLPFTKYDFGWVLLCIGMAIGAGTV FT LMPVQIGLKGIWVFITAFIIAYPATYIVQDIYLKTLSESETCDDYTDIISHYLGKNWGV FT FLGVIYFLMIIHGVFIYSLSVVFDSASYIKTFGLTEADLSQSIIYKVAIFAVLVAIASG FT GEKLLFKISGPMVVVKVGIILIFGLAMIPHWNLDNISAFPAASVFFRDVLLTIPFCFFS FT AVFIQVLNPMNIAYRKREPDRVLATRMAIRTHRISYITLIAIILFFSFSFTFSISHEEA FT VSAFEQNISALALAAQVIPGQIIHITSTILNIFAVLTAFFGIYLGFHEALKGIVLNVLS FT RIMDVKNINPLLLTSGICVFIVVTLVIWVSFRVSVLVFFQLGSPLYGIVACIIPFFLIY FT KVAQLEKLRGLKTWLILLYGILLCLSPLLKLIE" FT CDS complement(61606..62163) FT /pseudo FT /transl_table=11 FT /gene="STY4174" FT /product="putative trans-sulfuration enzyme (pseudogene)" FT /note="Similar to the C-terminus of Pseudomonas putida FT methionine gamma-lyase MdeA SW:MEGL_PSEPU (P13254) (398 aa) FT fasta scores: E(): 1e-07, 34.3% id in 166 aa, and to the FT C-terminus of to Deinococcus radiodurans trans-sulfuration FT enzyme DR0921 TR:Q9RVV1 (EMBL:AE001945) (392 aa) fasta FT scores: E(): 2.3e-05, 34.4% id in 180 aa" FT CDS 62104..62235 FT /transl_table=11 FT /gene="STY4175" FT /product="hypothetical protein" FT /note="Unknown hydrophobic protein. Doubtful CDS" FT /db_xref="UniProtKB/TrEMBL:Q8Z294" FT /protein_id="CAD08000.1" FT /translation="MPLQQGGYMTLTQLGVAFWHDLAAPIIAGIIASVIVNWLRDRK" FT CDS complement(62317..63996) FT /transl_table=11 FT /gene="STY4176" FT /gene_synonym="yhjU" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit FT to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. FT N-terminus contains hydrophobic, probable membrane-spanning FT regions" FT /db_xref="InterPro:IPR017744" FT /db_xref="UniProtKB/TrEMBL:Q8XFY5" FT /protein_id="CAD08001.1" FT /translation="MTQHTQTPSMPSPLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPL FT LNLVFMAFLLMPIPKYRLHRLRHWIAIPVGFALFWHDTWLPGPQSIMSQGTQVAEFSSG FT YLLDLIARFINWQMIGAIFVLLVAWLFLSQWIRVTVFVVAIMVWLNVLTLTGPVFTLWP FT AGQPTDTVTTTGGNAAATVATAGDKPVIGDMPAQTAPPTTANLNAWLNTFYAAEEKRKT FT TFPAQLPPDAQPFDLLVINICSLSWSDVEAAGLMSHPLWSHFDILFKHFNSGTSYSGPA FT AIRLLRASCGQPSHTRLYQPANNECYLFDNLAKLGFTQHLMMDHNGEFGGFLKEVRENG FT GMQSELMNQSGLPTALLSFDGSPVYDDLAVLNRWLTGEEREANSRSATFFNLLPLHDGN FT HFPGVSKTADYKIRAQKLFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQISGLR FT DIPSPSITNVPAGVKFFGMKAPHEGAPIDINQPSSYLAISELVVRAVDGKLFTEDSVNW FT NKLTSNLPQTAPVSENANAVVIQYQGKPYVRLNGGDWVPYPQ" FT CDS complement(63993..64184) FT /transl_table=11 FT /gene="STY4177" FT /product="putative membrane protein" FT /note="Orthologue of E. coli YHJT_ECOLI; Fasta hit to FT YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains FT an hydrophobic, possible membrane-spanning region" FT /db_xref="InterPro:IPR019995" FT /db_xref="UniProtKB/TrEMBL:Q8XGR3" FT /protein_id="CAD08002.1" FT /translation="MMTISDIVQIILFCALIFFPLGYLARHSLRRISDTTRLLFAKPRY FT VKPAGTLRRATKVKADKK" FT CDS complement(64181..65752) FT /transl_table=11 FT /gene="STY4178" FT /gene_synonym="yhjS" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yhjS (YHJS_ECOLI); Fasta hit FT to YHJS_ECOLI (523 aa), 80% identity in 519 aa overlap" FT /db_xref="InterPro:IPR017745" FT /db_xref="UniProtKB/TrEMBL:Q8Z293" FT /protein_id="CAD08003.1" FT /translation="MRDTVDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQ FT TIASQTENANVAVIGMEGDPGKVIKLDESHGPEKIRLFTMPDSEKGLYSLPHDLLCSVN FT PTHYFFILICANNTWRNITSESLHKWLEKMNKWTRFHHCSLLVITPCNNSDKQSSLLMG FT EYRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPR FT SDEKRILSHVAVLEGAPPLSEHWTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLAR FT RIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANMIIPWNAPLSRCLTLIESVQG FT QQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPV FT PGIRVEQALTLCRPSRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNR FT MVWFEDKQISAELVQMRLLSPELWGTPLPLAKRADPVINAEHDGRIWRRIPEPLRLLDD FT TAERAS" FT RBS complement(64193..64196) FT /note="possible RBS" FT RBS 65985..65988 FT /note="possible RBS" FT CDS 65997..66200 FT /transl_table=11 FT /gene="STY4179" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli YHJR_ECOLI; Fasta hit to FT YHJR_ECOLI (62 aa), 77% identity in 60 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q93IN4" FT /protein_id="CAD08004.1" FT /translation="MYNNEPGAQSDPTLGYTFQNDFLALSQAFSLPEIDYTDISQREQL FT AAAIKRWPLLAEFAQPHSLRKP" FT CDS 66201..66953 FT /transl_table=11 FT /gene="yhjQ" FT /gene_synonym="STY4180" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 27.1 kDa FT protein in dcta-dppf intergenic region yhjQ SW:YHJQ_ECOLI FT (P37655) (242 aa) fasta scores: E(): 0, 76.7% id in 240 aa, FT contains some similarity in C-terminus to Caulobacter FT crescentus chromosome partitioning protein parA TR:O05189 FT (EMBL:U87804) (266 aa) fasta scores: E(): 0.00046, 27.1% id FT in 155 aa" FT /note="Orthologue of E. coli YHJQ_ECOLI; Fasta hit to FT YHJQ_ECOLI (242 aa), 77% identity in 240 aa overlap" FT /db_xref="InterPro:IPR017746" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z292" FT /protein_id="CAD08005.1" FT /translation="MAILGLQGVRGGVGTTSLTAALAWALQILGENVLVIDASPDNLLR FT MSFNVDFVHQGGWARSLLDGQDWRDAGLRYTSQLDLLPFGQLTSQEWENPQAWQETLGE FT IGSAIQALKASGRYSWILLDLPYGESPLTRQLVSLCDHTLAIAQVDANCHIRLHQQALP FT AGAHILINDLRIGSQLQDDLYQVWLQSQRRLLPIVIHRDEAMAECMASKQPLGEYRSDS FT LAAEEVLTLANWCLLHDAGDKTSAGSLR" FT CDS 66950..69574 FT /transl_table=11 FT /gene="yhjO" FT /gene_synonym="STY4181" FT /product="putative polysaccharide biosynthesis protein FT catalytic subunit" FT /note="Similar to Escherichia coli hypothetical 78.6 kDa FT protein in dcta-dppf intergenic region yhjO SW:YHJO_ECOLI FT (P37653) (888 aa) fasta scores: E(): 0, 88.3% id in 871 aa, FT and to Acetobacter xylinum cellulose synthase catalytic FT subunit [udp-forming] bcsA SW:BCSA_ACEXY (P21877) (723 aa) FT fasta scores: E(): 0, 46.9% id in 680 aa, and to Rhizobium FT leguminosarum putative cellulose synthase celA TR:Q9X571 FT (EMBL:AF121340) (730 aa) fasta scores: E(): 0, 33.3% id in FT 685 aa" FT /note="Orthologue of E. coli YHJO_ECOLI; Fasta hit to FT YHJO_ECOLI (888 aa), 88% identity in 871 aa overlap" FT /db_xref="GOA:Q8Z291" FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z291" FT /protein_id="CAD08006.1" FT /translation="MSALSRWLLIPPVSARLSERYQGYRRHGASPFSAALGCLWTILAW FT IVFPLEHPRWQRIRDGHKALYPHINAARPRPLDPARYLIQTLWLVMISSTKERHEPRWR FT SFARLKDVRGRYHQWMDTLPERVRQKTTHLEKEKELGHLSNGARRFILGVIVTFSLILA FT LICITQPFNPLSQFIFLLLLWGVALLVRRMPGRFSALMLIVLSLTVSCRYIWWRYTSTL FT NWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKEMSQWPTVDIFVPT FT YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGRESFRQFARHVGVHYIARATHEHAK FT AGNINNALKHAKGEFVAIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFE FT RNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDA FT HTSLRLHRRGYTSAYMRIPQSAGLATESLSAHIGQRIRWARGMVQIFRLDNPLFGKGLK FT LAQRLCYLNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVIPHMVHASLT FT NSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGGLVEEKYVDWVI FT SRPYIFLVLLNLLGVAAGVWRYYYGPENETLTVIVSLVWVFYNLVILGGAVAVSVESKQ FT VRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKVNLLLKRGQ FT QEYVFPTQVVRVTGNEVGLQLMPLTTKQHIDFVQCTFARADTWALWQDSFPEDKPLESL FT LDILKLGFRGYRHLAEFAPPSVKVIFRSLTALIAWIVSFIPRRPERQAAIQPSDRVMAQ FT AQQ" FT misc_feature 67775..68290 FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferases, score 100.10, E-value 4.4e-26" FT CDS 69585..71885 FT /transl_table=11 FT /gene="STY4182" FT /gene_synonym="yhjN" FT /product="putative polysaccharide biosynthesis protein FT subunit B" FT /note="Similar to Escherichia coli hypothetical 86.0 kDa FT protein in dcta-dppf intergenic region precursor FT SW:YHJN_ECOLI (P37652) (779 aa) fasta scores: E(): 0, 82.8% FT id in 779 aa, and to Acetobacter xylinum cellulose synthase FT 93 kDa subunit precursor acsB SW:ACSB_ACEXY (P37716) (802 FT aa) fasta scores: E(): 0, 30.0% id in 781 aa" FT /note="Orthologue of E. coli yhjN (P76711); Fasta hit to FT P76711 (779 aa), 83% identity in 779 aa overlap" FT /db_xref="GOA:Q8Z290" FT /db_xref="InterPro:IPR018513" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z290" FT /protein_id="CAD08007.1" FT /translation="MKRKLSWMCAAVIGLSAFPAFMTAAAPAMPPLINAEPTEPAQSPV FT TEAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVNPNGGIEFGMRSDEVASKAVLNLEY FT TPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLEFVG FT HYRDVCENPASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVF FT ADMPDLAQQQAASIVASWFGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHP FT AVNAPVIEMMNHPDNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGSSVVVNDVKPLL FT ARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDM FT DLNYRYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSI FT PALKLGAMNQLRFDFRYMNPMPGGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMP FT DLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGAIGGQTGFPAINLTITD FT DSAQIADKDADLLIIGAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRA FT ADAQSTVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGS FT VAVIRESGVHSLRVGDIYYVGHLPWFERLWYALANHPVLLAVLAALSVVLLAWVLWRLL FT RILSRRRLDPDHE" FT misc_feature 70893..70982 FT /note="PS00189 2-oxo acid dehydrogenases acyltransferase FT component lipoyl binding site" FT CDS 71889..72998 FT /transl_table=11 FT /gene="yhjM" FT /gene_synonym="STY4183" FT /product="probable endoglucanase precursor" FT /note="Similar to Escherichia coli hypothetical 41.7 kDa FT protein in dcta-dppf intergenic region precursor yhjM FT SW:YHJM_ECOLI (P37651) (368 aa) fasta scores: E(): 0, 81.5% FT id in 367 aa, and to Erwinia chrysanthemi minor FT endoglucanase y precursor celY SW:GUNY_ERWCH (P27032) (332 FT aa) fasta scores: E(): 3.3e-21, 29.7% id in 343 aa, and to FT Cellulomonas uda endoglucanase precursor SW:GUN_CELUD FT (P18336) (359 aa) fasta scores: E(): 8.6e-21, 30.0% id in FT 323 aa" FT /note="Orthologue of E. coli yhjM (YHJM_ECOLI); Fasta hit FT to YHJM_ECOLI (368 aa), 82% identity in 367 aa overlap" FT /db_xref="GOA:Q8Z289" FT /db_xref="InterPro:IPR019834" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z289" FT /protein_id="CAD08008.1" FT /translation="MMTMLRGWITMIVMLTAINAQAACSWPAWEQFKKDYISQQGRVID FT PGDARKITTSEGQSYAMFFALAANDRPAFAQLFNWTQNNLAQGSLREHLPAWLWGQKDP FT DTWSVLDSNSASDGDIWMAWSLLEAGRLWKETRYTEVGTALLKRIAREEVVNVPGLGSM FT LLPGKIGFAEANSWRFNPSYLPPQLAQYFSRFGAPWSTLRETNLRLLLETSPKGFSPDW FT VRYESKQGWQLKAEKTLISSYDAIRVYLWTGMMHDGDPQKARLLARFKPMATLTMKNGV FT PPEKVDVVSGNAQGTGPVGFSAALLPFLQNRGAQAVQRQRVADHFPGSDAYYNYVLTLF FT GQGWDQHRFRFTVKGELLPDWGQECVSSR" FT misc_feature 71895..72929 FT /note="Pfam match to entry PF01270 Glyco_hydro_8, Glycosyl FT hydrolases family 8, score 485.10, E-value 5.6e-142" FT misc_feature 72231..72287 FT /note="PS00812 Glycosyl hydrolases family 8 signature" FT CDS 73091..76523 FT /pseudo FT /transl_table=11 FT /gene="yhjL" FT /gene_synonym="STY4184" FT /product="putative polysaccharide biosynthesis protein FT subunit C (pseudogene)" FT /note="Similar to Escherichia coli hypothetical 128.7 kDa FT protein in dcta-dppf intergenic region yhjL SW:YHJL_ECOLI FT (P37650) (1140 aa) fasta scores: E(): 0, 80.4% id in 1139 FT aa, and to Acetobacter xylinum cellulose synthase operon c FT protein bcsC SW:BCSC_ACEXY (P37718) (1302 aa) fasta scores: FT E(): 5e-32, 27.2% id in 1237 aa. This CDS contains three FT stop codons and a frameshift. The sequence has been checked FT and is believed to be correct" FT misc_feature 73955..74056 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 24.80, E-value 0.0021" FT misc_feature 74099..74200 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 13.90, E-value 1.5" FT misc_feature 74201..74302 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 13.90, E-value 1.5" FT CDS 76730..78703 FT /transl_table=11 FT /gene="STY4188" FT /gene_synonym="yhjK" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli 73.1 kDa protein in FT dcta-dppf intergenic region. protein yhjk SW:YHJK_ECOLI FT (P37649) (651 aa) fasta scores: E(): 0, 84.7% id in 648 aa, FT and to Bacillus subtilis YkoW protein ykoW TR:O34311 FT (EMBL:Z99110) (749 aa) fasta scores: E(): 0, 29.3% id in FT 444 aa, and to Escherichia coli hypothetical 74.7 kDa FT protein in osmb-rnb intergenic region yciR SW:YCIR_ECOLI FT (P77334) (661 aa) fasta scores: E(): 0, 31.6% id in 456 aa, FT and to Acetobacter xylinum c-di-gmp phosphodiesterase a FT pdea1 TR:O87373 (EMBL:AF052517) (765 aa) fasta scores: E(): FT 6.2e-33, 27.9% id in 433 aa" FT /note="Orthologue of E. coli yhjK (YHJK_ECOLI); Fasta hit FT to YHJK_ECOLI (651 aa), 85% identity in 648 aa overlap" FT /db_xref="GOA:Q8Z288" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q8Z288" FT /protein_id="CAD08010.1" FT /translation="MAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREP FT LSSAILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFE FT LPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYSLLSLILTVAI FT AWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQR FT QREEQTDNAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQR FT EILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPI FT QGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRL FT TEESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESC FT GLMVTVGHWVLEESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQP FT GTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDIL FT KIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVEDEAQRAWLEQAGVNVAQGFLFA FT RPVPADIFEERYLSHENPDYKS" FT misc_feature 77174..77395 FT /note="Pfam match to entry PF00672 DUF5, HAMP domain, score FT 34.00, E-value 3.4e-06" FT misc_feature 77402..77878 FT /note="Pfam match to entry PF00990 DUF9, Domain of unknown FT function DUF9, score -3.40, E-value 9.6e-05" FT misc_feature 77918..78655 FT /note="Pfam match to entry PF00563 DUF2, Domain of unknown FT function 2, score 440.00, E-value 2.1e-128" FT CDS 78861..80147 FT /transl_table=11 FT /gene="STY4189" FT /gene_synonym="dctA" FT /product="C4-dicarboxylate transport protein" FT /note="Fasta hit to GLTP_ECOLI (437 aa), 40% identity in FT 421 aa overlap" FT /note="Orthologue of E. coli dctA (DCTA_ECOLI); Fasta hit FT to DCTA_ECOLI (428 aa), 95% identity in 428 aa overlap" FT /db_xref="GOA:Q8Z287" FT /db_xref="InterPro:IPR018107" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z287" FT /protein_id="CAD08011.1" FT /translation="MKTSLFKSLYFQVLTAIAIGILLGHYYPELGAQMKPLGDAFVKLI FT KMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALINGLIIVNVVQPGAG FT MNVDPATLDAQAVAVYAAQAKEQGIIAFLMDVIPGSVIGAFASGNILQVLLFAVLFGFA FT LHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGSLVQLGQL FT IICFYITCILFVVVVLGTIARVTGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKME FT KLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSHMDIFHQITLLVVLLLSS FT KGAAGVTGSGFIVLAATISAVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATVVVA FT KWVKELDHQKLDDVLNNRAPDGKTHEISS" FT misc_feature 78885..80063 FT /note="Pfam match to entry PF00375 SDF, FT Sodium:dicarboxylate symporter family, score 704.20, FT E-value 6.2e-208" FT misc_feature 78966..79013 FT /note="PS00713 Sodium:dicarboxylate symporter family FT signature 1" FT misc_feature 79743..79814 FT /note="PS00714 Sodium:dicarboxylate symporter family FT signature 2" FT CDS 80367..81854 FT /transl_table=11 FT /gene="yhjJ" FT /gene_synonym="STY4190" FT /product="putative zinc-protease precursor" FT /note="Similar to Escherichia coli protein YhjJ precursor FT yhjJ SW:YHJJ_ECOLI (P37648) (498 aa) fasta scores: E(): 0, FT 85.7% id in 498 aa, and to Escherichia coli probable zinc FT protease PqqL pqqL SW:PQQL_ECOLI (P31828) (931 aa) fasta FT scores: E(): 9.4e-16, 23.2% id in 504 aa" FT /note="Orthologue of E. coli yhjJ (YHJJ_ECOLI); Fasta hit FT to YHJJ_ECOLI (498 aa), 86% identity in 498 aa overlap" FT /db_xref="GOA:Q8Z286" FT /db_xref="InterPro:IPR011237" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z286" FT /protein_id="CAD08012.1" FT /translation="MQGTKIRLLAGSLLMLASAGYVQADALQPDPAWQQGTLANGLQWQ FT VLATPQRPSDRIEVRLQVNTGSLTESTQQSGFSHAIPRIALTQSGGLDAAQARSLWQQG FT FDPKRPMPPVIVSYDSTLYSLSLPNNRNDLLKEALTYLANVSGKLTITPETVNHALSSE FT DMVATWPADTKEGWWRYRLKGSALLGHDPAEPLKQPVDAAKIQAFYEKWYTPDAMTLIV FT VGNIDARSVAEQINKTFGTLKGKRETPAPVPTLSPLRAESVSIMTDAVRQDRLSIMWDT FT PWQPIRESAALLRYWQADLAREALFWHIQQELTKNNAKDIGLGFDCRVLFLRAQCAINI FT ESPNDKLNTNLSLVANELAKVRDKGLSEEEFTALVAQKNLELQKLFATYARTDTDILTG FT QRMRSLQNQVVDIAPEQYQKLRQNFLNSLTVDMLNQNLRQQLSQEMALILLQPQGEPEF FT NMKALKATWDEIMVPATAAAVEADEAHPEVTETPAAQ" FT misc_feature 80499..80939 FT /note="Pfam match to entry PF00675 Peptidase_M16, FT Insulinase (Peptidase family M16), score -26.90, E-value FT 0.14" FT CDS complement(81908..82837) FT /transl_table=11 FT /gene="STY4191" FT /gene_synonym="kdgK" FT /product="2-dehydro-3-deoxygluconokinase" FT /note="Orthologue of E. coli kdgK (KDGK_ECOLI); Fasta hit FT to KDGK_ECOLI (309 aa), 92% identity in 308 aa overlap" FT /db_xref="GOA:Q8Z285" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q8Z285" FT /protein_id="CAD08013.1" FT /translation="MSKKIAVIGECMIELSQKGADVQRGFGGDTLNTSVYIARQVDSAA FT LAVHYVTALGTDSFSQQMLEAWQHENVDTSLTQRMENRLPGLYYIETDDTGERTFYYWR FT NEAAAKFWLESEQSAAICETLATFDYLYLSGISLAILSPTSRDKLLSLLRECRANGGKV FT IFDNNYRPRLWTSREETQQVYQKMLECTDIAFLTLDDEDALWGKQPVEEVIARTHAAGV FT QEVVVKRGADSCLVSIQGEALIDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAT FT DAAKRGHLTASTVIQYRGAIIPHDAMPQ" FT misc_feature complement(82025..82066) FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2" FT misc_feature complement(82031..82759) FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 310.20, E-value 2.4e-96" FT CDS 83066..83833 FT /transl_table=11 FT /gene="STY4192" FT /gene_synonym="yhjH" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yhjH (YHJH_ECOLI); Fasta hit FT to YHJH_ECOLI (255 aa), 78% identity in 255 aa overlap" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q8Z284" FT /protein_id="CAD08014.1" FT /translation="MIKQVIQQLRVPDAGIENLQERRYWLQCERAYTYQPIYQTDGRLM FT TVELLTAVTHPDNPSRRIAPDRYFAELAVRHRIDVVKEQLHQLEQKADFFTRHRLLASV FT NVDGPTLIAMRQQPDILAAMERLPWLRFELVEHIRLPKDSSFASMCEFVPLWLDDFGTG FT MANFSALSEVRYDYIKVARELFVMLRQSPEGRNLFILLLQLMNRYCRGVIVEGVETLEE FT WRDVQRSPAFAAQGYFLSRPVPLISLEEVILTL" FT misc_feature 83114..83806 FT /note="Pfam match to entry PF00563 DUF2, Domain of unknown FT function 2, score -36.50, E-value 0.00012" FT CDS 83943..86003 FT /transl_table=11 FT /gene="STY4193" FT /product="putative membrane protein" FT /note="Orthologue of E. coli YHJG_ECOLI; Fasta hit to FT YHJG_ECOLI (691 aa), 92% identity in 686 aa overlap" FT /db_xref="InterPro:IPR007844" FT /db_xref="UniProtKB/TrEMBL:Q8Z283" FT /protein_id="CAD08015.1" FT /translation="MTKAGKITAAITGTFLLLIAIVILLIATFDWNRLKPTINQKVSTE FT LNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGNPPDIPEVTMVHLPRVEA FT TLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPSAWSFRL FT DNILFDQGRIAIDDKVSKADITILVDPLGKPLPFSEVTGTKGKADKSTVGDYVFGLKAQ FT GRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGGVDLRL FT KFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYRGFNGRIGDSDIHGT FT FTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSGKDAEQSKRSEQRKGEKNVQPADKV FT LPYDRFETDKWDVMDADVRFKGRRIEHGGSLPISDLSTHIILKNADLRLQPLKFGLAGG FT SIVSNIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGELNGDADIRGTGNSVA FT ALLGNSNGNLKLLMNDGLISRNLMEIVGLNVGNYIIGQIFGDDEVRVNCAAANLNIANG FT VARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQ FT AGVKPGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILTQMKQ" FT CDS complement(86043..87365) FT /transl_table=11 FT /gene="STY4194" FT /gene_synonym="yhjE" FT /product="hypothetical metabolite transport protein" FT /note="Fasta hit to KGTP_ECOLI (432 aa), 32% identity in FT 434 aa overlap" FT /note="Fasta hit to PROP_ECOLI (500 aa), 34% identity in FT 429 aa overlap" FT /note="Fasta hit to SHIA_ECOLI (438 aa), 35% identity in FT 443 aa overlap" FT /note="Orthologue of E. coli yhjE (YHJE_ECOLI); Fasta hit FT to YHJE_ECOLI (440 aa), 94% identity in 440 aa overlap" FT /db_xref="GOA:Q8Z282" FT /db_xref="InterPro:IPR005829" FT /db_xref="UniProtKB/TrEMBL:Q8Z282" FT /protein_id="CAD08016.1" FT /translation="MQATATTLDHEQEHVPVNSRNKVVIASLIGTAIEFFDFYIYATAA FT VIVFPLIFFPQGDPTAATLQSLATFAIAFVARPIGSALFGHFGDRVGRKVTLVASLLTM FT GISTVIIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYG FT SFPQLGAPIGFFFANGTFPLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHET FT PVFAKVAAAKKQVKIPLGTLLTKHVHVTILGTFIMLATYTLFYIMTVYSMTYSTAAAPV FT GLGLPRNEILWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIILFALFAFTPLL FT GSGNPALVFVFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAP FT YIAAWLQSHYGLAAVGVYLASMAALTLIALLLTHETRHQAL" FT misc_feature complement(86046..87302) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score 312.90, E-value 3.8e-90" FT misc_feature complement(86391..86444) FT /note="PS00216 Sugar transport proteins signature 1" FT CDS complement(87716..88744) FT /transl_table=11 FT /gene="STY4195" FT /gene_synonym="yhjD" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yhjD (YHJD_ECOLI); Fasta hit FT to YHJD_ECOLI (337 aa), 86% identity in 341 aa overlap" FT /db_xref="GOA:Q8XF98" FT /db_xref="InterPro:IPR004664" FT /db_xref="UniProtKB/TrEMBL:Q8XF98" FT /protein_id="CAD08017.1" FT /translation="MTQENDVKRPIQELEHDPIQKIETQPHDAPEKNEKANQALHSVTT FT LMQKIQRQPMVAHLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASH FT PNLLEDIFSKILMNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLRE FT AIRAQSRDVWERKPQDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISAL FT YLDSIEWLKPAWHLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVI FT KIIMTYTLPSLVKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKT FT QR" FT CDS complement(88817..89719) FT /transl_table=11 FT /gene="STY4196" FT /gene_synonym="yhjC" FT /product="hypothetical lysR-family transcriptional FT regulator" FT /note="Similar to Escherichia coli hypothetical FT transcriptional regulator in tref-kdgk intergenic region FT yhjC SW:YHJC_ECOLI (P37641) (299 aa) fasta scores: E(): 0, FT 66.6% id in 296 aa, and to Pseudomonas fluorescens FT transcriptional activator of pyoluteorin biosynthetic genes FT pltR TR:Q9X3Q9 (EMBL:AF081920) (343 aa) fasta scores: E(): FT 3.2e-21, 27.8% id in 291 aa" FT /note="Fasta hit to YAFC_ECOLI (304 aa), 31% identity in FT 293 aa overlap" FT /note="Fasta hit to YFER_ECOLI (308 aa), 30% identity in FT 260 aa overlap" FT /note="Fasta hit to YEAT_ECOLI (307 aa), 31% identity in FT 293 aa overlap" FT /note="Orthologue of E. coli yhjC (YHJC_ECOLI); Fasta hit FT to YHJC_ECOLI (299 aa), 67% identity in 296 aa overlap" FT /db_xref="GOA:Q8Z281" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q8Z281" FT /protein_id="CAD08018.1" FT /translation="MMDKIYAMKLFVRVAERESFSRAAEDIGLPKGSVSRQIQALEHQL FT GIRLLHRTTRRVQLTQDGMVYYERAKDLLSNLDELEGLFQPDPASISGKIRVDIPPGLA FT NSLIMPRLLTFLHQYPGIALELCSSDRQVDLLREDFDCVVRTEPLHAPGILTRPLGKLR FT RVNCASPQYLARFGYPENLDDLASHAMVHYSLTPGVSSPGFAFETPHGMQWVKTGGMLT FT VNSTETWHTACLAGLGIIQTPRIAVREALRAGALIEILPQYRAAPLPVTLHYPHRRNLS FT RRVHLFMVWLTETIKEAAE" FT misc_feature complement(89288..89707) FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 155.00, E-value 1.3e-42" FT misc_feature complement(89573..89665) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT CDS 90347..90949 FT /transl_table=11 FT /gene="STY4197" FT /gene_synonym="yhjB" FT /product="hypothetical luxR-family transcriptional FT regulator" FT /note="Similar to Escherichia coli hypothetical FT transcriptional regulator in tref-kdgk intergenic region FT yhjB SW:YHJB_ECOLI (P37640) (200 aa) fasta scores: E(): 0, FT 72.0% id in 200 aa, and to Hyphomicrobium methylovorum FT probable transcriptional regulatory protein sgar. probable FT transcriptional regulatory protein sgar SW:SGAR_HYPME FT (P56644) (211 aa) fasta scores: E(): 7.7e-09, 27.9% id in FT 197 aa" FT /note="Orthologue of E. coli yhjB (YHJB_ECOLI); Fasta hit FT to YHJB_ECOLI (200 aa), 72% identity in 200 aa overlap" FT /db_xref="GOA:Q8Z280" FT /db_xref="HSSP:1FSE" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q8Z280" FT /protein_id="CAD08019.1" FT /translation="MQVIMFDRQSIFIHGMKISLQQHIPGISIQSVGQAEELWQKIESA FT PDALVMLDSGLDAEFCREVLQRTAQQFPEVKIIITAMDGSQKWLHEVMQFNVQVVVPRD FT SDAETFVLALNTVARGMMFLPGDWLNSTELESHDIKALSARQREILQMLAAGESNKQIG FT RALNISTGTVKAHLESLYRRLDVKNRTQAAMMLNESN" FT misc_feature 90761..90946 FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 79.00, E-value FT 9.7e-20" FT misc_feature 90812..90895 FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature" FT CDS complement(90955..91311) FT /transl_table=11 FT /gene="STY4198" FT /product="phage-like lysozyme" FT /note="Similar to Bacteriophage APSE-1 probable lysozyme 13 FT TR:Q9T1T5 (EMBL:UNNKOWN ACCESSION) (146 aa) fasta scores: FT E(): 1.2e-05, 33.6% id in 113 aa, and to Bacteriophage PZA FT lysozyme SW:LYCV_BPPZA (P07540) (258 aa) fasta scores: E(): FT 0.035, 28.9% id in 97 aa" FT /db_xref="HSSP:1P3N" FT /db_xref="UniProtKB/TrEMBL:Q8Z279" FT /protein_id="CAD08020.1" FT /translation="MPHISSRFSSACIAFIKQWQGLSLEKYRDRQGNWVIGYGHMLTPD FT ETLTFITPDQAEAFLLDDLNSCDMLLQNCLPELNDRFQRETLIALMFSIGHQRFLSLIN FT TDDISQPEISGLRI" FT CDS 91592..93181 FT /transl_table=11 FT /gene="STY4199" FT /product="putative membrane protein" FT /note="No database matches; contains one putative FT transmembrane domain" FT /db_xref="UniProtKB/TrEMBL:Q8Z278" FT /protein_id="CAD08021.1" FT /translation="MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFM FT EQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLAAL FT RFVTSLEHLRQQQPLLTYQTELEDPDQEAHLEAQRQLRAIELTLKALIARAWPDRASLN FT HYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTL FT FAESRTTLRMFLDDCRLARNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVN FT PASFLLADERELRQFWETARLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQLISGAL FT WGGVGVMTLAILAGAFWLFSSSSPSSDNGQAPAMAQDEPPREAPSARETLNHMGITWDA FT FTMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCR FT RFITTLSHDMSSGAPLTAMHKTYLQTFCTVPAVVTRQQYDTEQAQLRAQARPSADNKKW FT LKIQSAIYDAIH" FT CDS complement(93194..94843) FT /transl_table=11 FT /gene="STY4200" FT /gene_synonym="treF" FT /product="cytoplasmic trehalase" FT /EC_number="3.2.1.28" FT /note="Similar to Escherichia coli probable cytoplasmic FT trehalase TreF SW:TREF_ECOLI (P37196) (549 aa) fasta FT scores: E(): 0, 92.0% id in 550 aa, and to Escherichia coli FT periplasmic trehalase precursor TreA SW:TREA_ECOLI (P13482) FT (565 aa) fasta scores: E(): 0, 50.7% id in 495 aa. Does not FT appear to have N-terminal signal sequence." FT /db_xref="GOA:Q8Z277" FT /db_xref="InterPro:IPR018232" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z277" FT /protein_id="CAD08022.1" FT /translation="MLNQKLNPTPSEDLTIDVDLFYETDPCELKLDEMIEAEPEPEMIE FT GLPASDALTPADRYLELFEHVQSTKLFPDSKTFPDCAPKMDPLDILIRYRKVRRHRDFD FT LRRFVENHFWLPETLSSEYVSNPENSLKEHIDQLWPILTREPQDHIPWSSLLALPQSYI FT VPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYYLSRS FT QPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLALNQAYRHVVRMPDGSLL FT NRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDAGRLAS FT IRTTQFIPIDLNAFLYKLESAIANISALKGERDTEALFRQKASDRRAAVNHYLWDDENG FT CYRDYDWRREEMALFSAASIVPLYVGMANHEQADRLANVVRSRLLTPGGIMATEYETGE FT QWDKPNGWAPLQWMAIQGFKRYGDDMLGDEIAHNWLKTVNHFYQEHHKLIEKYHISGGT FT PREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP" FT misc_feature complement(93203..94822) FT /note="Pfam match to entry PF01204 Trehalase, Trehalase, FT score 1033.70, E-value 0" FT misc_feature complement(93440..93469) FT /note="PS00928 Trehalase signature 2" FT misc_feature complement(94310..94351) FT /note="PS00927 Trehalase signature 1" FT CDS 95168..95887 FT /transl_table=11 FT /gene="STY4201" FT /product="gntR family regulatory protein" FT /note="Similar to Bacillus subtilis YvoA TR:O34817 FT (EMBL:AF017113) (243 aa) fasta scores: E(): 1.9e-22, 31.9% FT id in 232 aa, and Bacillus subtilis hypothetical FT transcriptional regulator in hom-mrgA intergenic region FT YurK SW:YURK_BACSU (O32152) (242 aa) fasta scores: E(): FT 1.1e-20, 31.4% id in 236 aa" FT /db_xref="GOA:Q8Z276" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q8Z276" FT /protein_id="CAD08023.1" FT /translation="MIEQPDSKSAKPLYKQLEDALKEAIARGEYKPGQQIPTENELSVR FT WQVSRVTVRKALDALTRENLLTRVSGKGTFVSGEKFQRSMTGIMSFSELCQSQGRRPGS FT RTIKSVFESVDDETKALLNMNDGEKAVVIERIRYADDVAVSLETVHLPPRFAFLLDEDL FT NNHSLYECLREKYHLWFTHSRKMIELVYASFEVAHYLGVNEGYPLILIKSEMIDNKGEL FT SCVSQQLIVGDKIRFTV" FT misc_feature 95216..95395 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 79.80, E-value FT 4.1e-23" FT CDS 96063..96917 FT /transl_table=11 FT /gene="STY4202" FT /product="putative phosphosugar-binding protein" FT /note="Similar to the N-terminal regions of Bacillus FT subtilis yurP protein TR:O32157 (EMBL:Z99120) (328 aa) FT fasta scores: E(): 0, 44.4% id in 257 aa, and to FT Agrobacterium tumefaciens mocD protein TR:Q44324 FT (EMBL:AF242881) (340 aa) fasta scores: E(): 3.3e-24, 32.2% FT id in 267 aa. Lack of similarity to the C-terminal regions FT of these proteins. The CDS appears to be a fusion protein, FT after residue 266 the CDS is similar to L-asparaginase FT (STY4203). C-terminal deletion of DNA relative to FT Salmonella typhimurium. Effect on function not known." FT /db_xref="GOA:Q8Z275" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/TrEMBL:Q8Z275" FT /protein_id="CAD08024.1" FT /translation="MMGMKETVSNIVTSQAEKGGVKHVYYVACGGSYAAFYPAKAFLEK FT EAKALTVGLYNSGEFINNPPVALGENAVVVVASHKGNTPETIKAAEIARQHGAPVIGLT FT WIMDSPLVAHCDYVETYTFGDGKDIAGEKTMKGLLSAVELLQQTEGYAHYDDFQDGVSK FT INRIVWRACEQVAERAQAFAQEYKDDKVIYTVASGAGYGAAYLQSICIFMEMQWIHSAC FT IHSGEFFHGPFEITDANTPFFFQFSEGNTRAVDERALNFLKKYGQRYYPETFTEGECVI FT GAG" FT misc_feature 96105..96518 FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 17.50, E-value 0.004" FT CDS 96850..97180 FT /pseudo FT /transl_table=11 FT /gene="STY4203" FT /product="L-asparaginase (pseudogene)" FT /note="Gene remnant. Similar to internal fragment of FT Erwinia chrysanthemi L-asparaginase precursor asn FT SW:ASPG_ERWCH (P06608) (348 aa) fasta scores: E(): 1.9e-21, FT 81.2% id in 69 aa. Deletion of DNA relative to Salmonella FT typhimurium." FT misc_feature 96925..96957 FT /note="PS00917 Asparaginase / glutaminase active site FT signature 2" FT CDS complement(97227..98579) FT /transl_table=11 FT /gene="STY4205" FT /gene_synonym="gor" FT /product="glutathione reductase" FT /EC_number="1.6.4.2" FT /note="Similar to Escherichia coli glutathione reductase FT gor SW:GSHR_ECOLI (P06715) (450 aa) fasta scores: E(): 0, FT 94.7% id in 450 aa, and to Haemophilus influenzae FT glutathione reductase HI0161 SW:GSHR_HAEIN (P43783) (456 FT aa) fasta scores: E(): 0, 74.8% id in 457 aa" FT /db_xref="GOA:Q8Z274" FT /db_xref="HSSP:1GER" FT /db_xref="InterPro:IPR013027" FT /db_xref="UniProtKB/TrEMBL:Q8Z274" FT /protein_id="CAD08026.1" FT /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNV FT GCVPKKVMWHAAQIREAIHLYGPDYGFDTTINQFDWSKLIASRTAYIDRIHTSYDNVLG FT KNNVDVIKGFARFVDAKTIEVNGETITADHILIATGGRPSHPSIPGVEYGIDSDGFFAL FT SALPERVAVVGAGYIAVELAGVINALGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEG FT PQLHTHAVPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPSTDNINLAAAGVKTNE FT KGYIIVDKWQNTNVEGIYAVGDNTGAIELTPVAVAAGRRLSERLFNNKPDEHLDYSNIP FT TVVFSHPPIGTVGLSEPQAREQYGDEQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGPE FT EKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTASEEFVTMR" FT misc_feature complement(97668..98561) FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 307.50, E-value FT 4.4e-90" FT misc_feature complement(98433..98465) FT /note="PS00076 Pyridine nucleotide-disulphide FT oxidoreductases class-I active site" FT CDS complement(98684..99526) FT /transl_table=11 FT /gene="STY4206" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 31.9 kDa FT protein in prlC-gor intergenic region YhiR SW:YHIR_ECOLI FT (P37634) (280 aa) fasta scores: E(): 0, 92.1% id in 280 aa, FT and to Haemophilus influenzae hypothetical protein HI0441 FT SW:YHIR_HAEIN (P31777) (281 aa) fasta scores: E(): 0, 65.1% FT id in 281 aa" FT /db_xref="GOA:Q8XGN2" FT /db_xref="InterPro:IPR007473" FT /db_xref="UniProtKB/TrEMBL:Q8XGN2" FT /protein_id="CAD08027.1" FT /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKEKPFLYLDTHAGA FT GRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEPYISVVKHFNRSGQLRYYPGSPLIA FT RQLLREQDSLQLTELHPSDFPLLRAEFQKDNRARVERADGYQQLKAKLPPVSRRGLILI FT DPPYEMKTDYQAVVSGISEGYKRFATGTYALWYPVVLRQQIKRMIHELEATGIRKILQI FT ELAIRPDSDQRGMTASGMIVVNPPWKLEQQMNNVLPWLHSRLAPNGHGHTSVSWIVPE" FT misc_feature complement(98786..98806) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature" FT misc_feature complement(99026..99046) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature" FT CDS complement(99647..100138) FT /transl_table=11 FT /gene="STY4207" FT /product="putative membrane protein" FT /note="Similar to N-terminus region of Deinococcus FT radiodurans peptide ABC transporter, permease protein FT DRA0209 TR:Q9RYU7 (EMBL:AE001863) (328 aa) fasta scores: FT E(): 0.58, 28.4% id in 169 aa. Predicted hydrophobic FT membrane spanning domain, integral membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q8Z273" FT /protein_id="CAD08028.1" FT /translation="MYNILNFFVSGIQGLYMTTLLQVIVLIFIVFFIFPGRKIFRRSKH FT LQDGRKLISSSSLMLRKFGSSRGYNADYYFDMQYLYEVADGITTAIPLTSIIEAKPGTT FT RVSGRSVWSVDWITAEGQRKQTRFLHNYTLFNRNFATFLKTVKQANPDACITSLTLFTL FT " FT CDS 100368..101021 FT /transl_table=11 FT /gene="STY4208" FT /product="putative lipoprotein" FT /note="Similar to Escherichia coli hypothetical 24.8 kDa FT protein in ibpA-gyrB intergenic region YidX SW:YIDX_ECOLI FT (P31461) (223 aa) fasta scores: E(): 6e-27, 45.1% id in 175 FT aa. Putative N-terminal lipoprotein attachment site." FT /db_xref="UniProtKB/TrEMBL:Q8Z272" FT /protein_id="CAD08029.1" FT /translation="MFHYGKCVVRTLFLLLVCCSLSGCLSFGLILATDKDGNRHQSTWK FT SDTVTALSLGKDSNGKTGWVFVGEHFDYLLTQGGDNVVALLKDATIRRDKMRVKDGVKF FT LIDTDKKEFTGEVNVTYAWVDEKDKLAAVGYGFICADGAVNCTLSVMDLKGTIHQKNKE FT QSVTQQLSFYHPFTVEFYQYQRSMSGAKFGRVLLPVTLALDIVTMPLQLLIFSR" FT misc_feature 100407..100439 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT misc_feature 100530..100553 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 101184..103226 FT /transl_table=11 FT /gene="STY4209" FT /gene_synonym="prlC" FT /product="oligopeptidase A" FT /EC_number="3.4.24.70" FT /note="Similar to Salmonella typhimurium oligopeptidase A FT PrlC SW:OPDA_SALTY (P27237) (680 aa) fasta scores: E(): 0, FT 99.7% id in 680 aa, and to Escherichia coli oligopeptidase FT A PrlC or opdA SW:OPDA_ECOLI (P27298) (680 aa) fasta FT scores: E(): 0, 95.1% id in 680 aa" FT /db_xref="GOA:Q8Z271" FT /db_xref="HSSP:1I1I" FT /db_xref="InterPro:IPR006025" FT /db_xref="UniProtKB/TrEMBL:Q8Z271" FT /protein_id="CAD08030.1" FT /translation="MTNPLLTSFSLPPFSAIKPEHVVPAVTKALADCRAAVEGVVAHGA FT PYSWENLCQPLAEADDVLGRIFSPISHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHE FT GLYNAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELG FT NQYSNNVLDATMGWTKLITDEAELAGMPESALAAAKALAEAKEQEGYLLTLDIPSYLPV FT MTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSPVMEEILALRHELAQLLGFENYAHE FT SLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVEELQPWDIAYYSEK FT QKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERTDVDVWHPEVRFFELYDE FT NNELRGSFYLDLYAREHKRGGAWMDDCVGQMRKADGTLQKPVAYLTCNFNRPVNGKPAL FT FTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAF FT ISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFNPQQGAKILDT FT LFEIKKQVAVVPSPTWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAYSRFEEEGIFN FT RETGQSFLDNILTRGGSEEPMELFKRFRGREPQLDAMLEHYGIKG" FT misc_feature 101337..103217 FT /note="Pfam match to entry PF01432 Peptidase_M3, Peptidase FT family M3, score 980.10, E-value 5.3e-291" FT misc_feature 102579..102608 FT /note="PS00142 Neutral zinc metallopeptidases, zinc-binding FT region signature" FT CDS 103233..103991 FT /transl_table=11 FT /gene="STY4210" FT /product="conserved hypothetical protein" FT /note="Similar to Salmonella typhimurium hypothetical 27.4 FT kDa protein in uspA-prlC intergenic region YhiQ TR:Q9X6G2 FT (253 aa) fasta scores: E(): 0, 98.4% id in 253 aa, and to FT Escherichia coli hypothetical 26.9 kDa protein in uspA-prlC FT intergenic region YhiQ SW:YHIQ_ECOLI (P37633) (250 aa) FT fasta scores: E(): 0, 94.0% id in 250 aa" FT /db_xref="InterPro:IPR007536" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z270" FT /protein_id="CAD08031.1" FT /translation="MQICLMDETGATDGALSVLAARWGLEHDEDNPMALVLTPQHLELR FT KRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAF FT VLASVGCRVRMLERNPVVAALLDDGLTRGYADADIGGWLQERLQLIHASSLTALTDITP FT RPQVVYLDPMFPHRQKSALVKKEMRVFQSLVGPDLDADGLLEPARQLATKRVVVKRPDY FT APPLADVATPNAIVTKEHRFDIYAGTPLTE" FT CDS complement(104083..105552) FT /transl_table=11 FT /gene="STY4211" FT /product="putative PTR2 family transport protein" FT /note="Similar to Escherichia coli hypothetical 53.7 kDa FT protein in uspA-prlC intergenic region YhiP SW:YHIP_ECOLI FT (P36837) (489 aa) fasta scores: E(): 0, 88.2% id in 485 aa, FT and to Aeromonas hydrophila putative di/tri peptide FT transporter YhiP TR:CAB76924 (499 aa) fasta scores: E(): 0, FT 79.0% id in 491 aa. Predicted hydrophobic membrane spanning FT domains, integral membrane protein." FT /db_xref="GOA:Q8Z269" FT /db_xref="InterPro:IPR018456" FT /db_xref="UniProtKB/TrEMBL:Q8Z269" FT /protein_id="CAD08032.1" FT /translation="MNTTAPTGLLQQPRPFFMIFFVELWERFSYYGVQGILAVFFVKQL FT GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTLVLGAIVLAIGYFMTGMSLLN FT PDLIFIALGTIAVGNGLFKANPASLLSKCYQPKDPRLDGAFTLFYMSINIGSLLSLSLA FT PVIADKFGYAVTYNLCGAGLIVALLVYFACRGMVKNIGSEPDHKPLRFRNLLLVLLGTV FT VMIFLCAWLMHNVKIANLVLIVLSIVVTIFFFREAFRLDKTGRNKMFVAFILMIEAVLF FT YILYAQMPTSLNFFAINNVHHEILGFAINPVSFQALNPFWVVVASPVLAAIYTRLGSKG FT KDLTMPMKFTLGMFLCALGFLTAAAGMWFADAQGLTSPWFIVLVYLFQSLGELLISALG FT LAMVAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPENITDPLQTLPIYTGVFS FT KIGLVTLAVTVVMAIMVPWLNRMINTQGTEQ" FT misc_feature complement(104272..105312) FT /note="Pfam match to entry PF00854 PTR2, POT family, score FT 345.80, E-value 3.4e-102" FT misc_feature complement(105082..105120) FT /note="PS01023 PTR2 family proton/oligopeptide symporters FT signature 2" FT CDS complement(105877..106311) FT /transl_table=11 FT /gene="STY4212" FT /gene_synonym="uspA" FT /product="universal stress protein A" FT /note="Similar to Escherichia coli universal stress protein FT A UspA SW:USPA_ECOLI (P28242) (143 aa) fasta scores: E(): FT 0, 97.9% id in 143 aa, and to Haemophilus influenzae FT universal stress protein a homolog HI0815 SW:USPA_HAEIN FT (P44880) (141 aa) fasta scores: E(): 0, 68.6% id in 140 aa" FT /db_xref="GOA:Q8Z268" FT /db_xref="HSSP:1JMV" FT /db_xref="InterPro:IPR006016" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z268" FT /protein_id="CAD08033.1" FT /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYSD FT LYTGLIDVNLGDMQKRISKETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDM FT DLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE" FT misc_feature complement(105901..106209) FT /note="Pfam match to entry PF00582 Usp, Universal stress FT protein family, score 148.30, E-value 1.3e-40" FT CDS 106699..107034 FT /transl_table=11 FT /gene="STY4213" FT /gene_synonym="uspB" FT /product="universal stress protein B" FT /note="Similar to Escherichia coli universal stress protein FT B UspB SW:USPB_ECOLI (P37632) (111 aa) fasta scores: E(): FT 0, 95.5% id in 111 aa. Predicted hydrophobic membrane FT spanning domains, integral membrane protein" FT /db_xref="GOA:P67687" FT /db_xref="InterPro:IPR019598" FT /db_xref="UniProtKB/Swiss-Prot:P67687" FT /protein_id="CAD08034.1" FT /translation="MISTVSLFWALCVVCIVNMARYFSSLRALLVVLRGCDPLLYQYVD FT GGGFFTTHGQPNKQVRLVWYIYAQRYRDHHDEEFIRRCERVRRQFLLTSALCGLVVVSL FT IALMIWH" FT CDS complement(107174..108670) FT /transl_table=11 FT /gene="STY4214" FT /gene_synonym="pitA" FT /product="putative low-affinity inorganic phosphate FT transporter" FT /note="Similar to Escherichia coli low-affinity inorganic FT phosphate transporter 1 PitA SW:PITA_ECOLI (P37308) (499 FT aa) fasta scores: E(): 0, 92.4% id in 499 aa, and to FT Escherichia coli probable low-affinity inorganic phosphate FT transporter 2 PitB SW:PITB_ECOLI (P43676) (499 aa) fasta FT scores: E(): 0, 81.2% id in 499 aa. Predicted hydrophobic FT membrane spanning domains, integral membrane protein." FT /db_xref="GOA:Q8XFR9" FT /db_xref="InterPro:IPR001204" FT /db_xref="UniProtKB/TrEMBL:Q8XFR9" FT /protein_id="CAD08035.1" FT /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYT FT RAMRSQLAVVMAAVFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSAHGLAMVFSMLLAA FT IIWNLGTWYFGLPASSSHTLIGAIIGIGLTNAMMTGTSVVDALNIPKVINIFGSLIISP FT IVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVA FT FSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNASSYEITRTRDAINNVETYFEQRPDLL FT KAVTGVDQLIPSPEPGATEPTEFHCHPANTINALNRAKGMLANVESYDKLSVEQRSQLR FT RIMLCISDTTDKVVKLPGVSSDDQRLLKKLKTDMLSTIEYAPVWIIMAVALALGIGTMI FT GWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMV FT VDGGGLQRKTVTSILMAWVFTLPAAIILSGVLYWLSLKII" FT misc_feature complement(107210..108583) FT /note="Pfam match to entry PF01384 PHO4, Phosphate FT transporter family, score 435.80, E-value 1.2e-138" FT CDS 108901..110103 FT /transl_table=11 FT /gene="STY4215" FT /product="putative exported protein" FT /note="Similar to Escherichia coli hypothetical protein FT YhiN SW:YHIN_ECOLI (P37631) (400 aa) fasta scores: E(): 0, FT 87.9% id in 398 aa and to Vibrio cholerae hypothetical FT protein VC0080 TR:Q9KVQ9 (EMBL:AE004099) (398 aa) fasta FT scores: E(): 0, 60.8% id in 388 aa. Contains a possible FT N-terminal signal sequence" FT /db_xref="InterPro:IPR004792" FT /db_xref="UniProtKB/TrEMBL:Q8Z267" FT /protein_id="CAD08036.1" FT /translation="MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMS FT GGGRCNFTNLYVEPAAYLSQNPHFCKSALARYTQWDFIDLVGRYGIAWHEKTLGQLFCD FT DSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFVLALNGETVTTQKLVIASGGLS FT MPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITARNGT FT VFRENLLFTHRGLSGPAVLQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPNQSLKN FT TLAMHLPKRLVECLQQLGLIPDVSLRQLNVRDQQTLVDTLTAWQVQPNGTEGYRTAEVT FT LGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIALKI FT N" FT CDS 110203..110319 FT /transl_table=11 FT /gene="STY4216" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q8Z266" FT /protein_id="CAD08037.1" FT /translation="MHGMTTDFVLTMGNADGSFRYKVVAVKPDKLVSAREPE" FT CDS complement(110608..111845) FT /pseudo FT /transl_table=11 FT /gene="STY4217" FT /product="putative membrane protein (pseudogene)" FT /note="Similar to Escherichia coli hypothetical 46.3 kDa FT protein in glnA-rbn intergenic region YihN SW:YIHN_ECOLI FT (P32135) (421 aa) fasta scores: E(): 1.1e-32, 28.8% id in FT 413 aa, and to Escherichia coli hypothetical 46.8 kDa FT protein in cysJ-eno intergenic region SW:YQCE_ECOLI FT (P77031) (425 aa) fasta scores: E(): 1.6e-25, 25.8% id in FT 411 aa. Predicted hydrophobic membrane spanning domains, FT integral membrane protein. Contains a frameshift after FT codon 13, although there is a reasonable alternative start FT site after codon 30. Frame shift occurs at a poly T FT heptamer" FT CDS complement(111900..112547) FT /transl_table=11 FT /gene="STY4219" FT /product="putative DNA-binding protein" FT /note="Similar to Escherichia coli hypothetical 26.8 kDa FT protein in rpsL-fkpA intergenic region YheO SW:YHEO_ECOLI FT (P45533) (240 aa) fasta scores: E(): 3.6e-18, 34.3% id in FT 216 aa, and to Campylobacter jejuni helix-turn-helix FT containing protein CJ1387C TR:CAB73814 (218 aa) fasta FT scores: E(): 1.8e-14, 32.5% id in 209 aa. Contains FT helix-turn-helix motif, residues 191 to 212, score 1911 FT (+5.70 SD)." FT /db_xref="GOA:Q8Z265" FT /db_xref="InterPro:IPR013559" FT /db_xref="UniProtKB/TrEMBL:Q8Z265" FT /protein_id="CAD08039.1" FT /translation="MKNTCLEPYEFLIDFLADYFGENTEVVLHNLSDLESSIHKIRNGH FT ISGRSVGDPITDLVVRAMKNNDSEVHYQCNYLSKTRDGRRLKCATFFIRNKQGEIVGAL FT CLNTVVEDLIALNDKLSHFLSIFVGQTDNNNGTQLDEHIGLTIPEMVDLKINNVINIEN FT INPESLNAENKSHIISLLNDEGVFLLKGAVTKVAKKLNISEPTVYKYIQKLK" FT CDS complement(112586..112966) FT /transl_table=11 FT /gene="STY4220" FT /product="putative regulatory protein" FT /note="Similar to Escherichia coli TdcF protein tdcF FT SW:TDCF_ECOLI (P42631) (129 aa) fasta scores: E(): 1.7e-19, FT 44.5% id in 128 aa, Bacillus subtilis putative regulator of FT purine biosynthesis (required for adenine-mediated FT repression of purine biosynthetic genes in vivo) yabJ FT SW:YABJ_BACSU (P37552) (124 aa) fasta scores: E(): 2.7e-19, FT 47.5% id in 120 aa and to Rattus norvegicus translational FT inhibitor protein psp1 SW:UK14_RAT (P52759) (136 aa) fasta FT scores: E(): 2.9e-18, 41.5% id in 123 aa" FT /db_xref="HSSP:1J7H" FT /db_xref="InterPro:IPR019897" FT /db_xref="UniProtKB/TrEMBL:Q8Z264" FT /protein_id="CAD08040.1" FT /translation="MKEIIFTETAPAAIGSYSQGNAMGNLIFTSGQLPINADSGKIETD FT DIQEQTRQSLLNLLAVVKMAGGDTDTVLKTTCFLSDMADFAAFNDVYASFFKINPPARS FT CFAVKTLPMGARVEIEAVAFRQ" FT misc_feature complement(112592..112948) FT /note="Pfam match to entry PF01042 UPF0076, Domain of FT unknown function UPF0076, score 194.20, E-value 2.1e-54" FT misc_feature complement(112610..112666) FT /note="PS01094 Uncharacterized protein family UPF0076 FT signature" FT CDS complement(112976..114142) FT /transl_table=11 FT /gene="STY4221" FT /product="putative aminotransferase" FT /note="Similar to Treponema denticola hemolysin hly FT TR:Q56257 (EMBL:U30249) (399 aa) fasta scores: E(): 0, FT 32.9% id in 392 aa and to Escherichia coli probable FT aminotransferase MalY SW:MALY_ECOLI (P23256) (390 aa) FT fasta scores: E(): 9.9e-31, 25.3% id in 387 aa. The T. FT denticola hemolysin has been experimentally characterised." FT /db_xref="GOA:Q8Z263" FT /db_xref="HSSP:1C7N" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q8Z263" FT /protein_id="CAD08041.1" FT /translation="MKYDFNEIYQRIASEKWEYDSVINGFPVIPMSVADTDLVSPVEVR FT QALIEVCNRREFGYPAYHDDFKDVLASWYDRYYDWRPDTADIIETPPLLMTMGAFIRGM FT TQCNESVVVMTPVYHSFARTIRENHRAVTECDLLRDENNHYTIDFEKLEDTCSRPENKI FT LIFCNPHNPVGRCWTEEEVRKVAAIAQKTGTILISDEIHADFVYDEKCYTPVMKAAENL FT NGIIVFLSGGKLFNIGGIFSSYVFTADPVFKKQMAVVLKELHFQPTAFAHEAAYAGYKY FT YHDYREEVVNHIRKMQIKLVNGLNNMPYPVKANLPEATYLVWADFNDTGWSGDRIQEFL FT VQDAGLGFNRGDQFGVAGTGFARINCGVPESRIDEALSRLEKAFSKYF" FT CDS complement(114158..115450) FT /transl_table=11 FT /gene="STY4222" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 46.8 kDa FT protein in cysJ-eno intergenic region SW:YQCE_ECOLI FT (P77031) (425 aa) fasta scores: E(): 0, 30.0% id in 430 aa, FT and to Escherichia coli hypothetical 46.3 kDa protein in FT glnA-rbn intergenic region YihN SW:YIHN_ECOLI (P32135) (421 FT aa) fasta scores: E(): 0, 27.7% id in 415 aa. Predicted FT hydrophobic membrane spanning domains, integral membrane FT protein." FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q8Z262" FT /protein_id="CAD08042.1" FT /translation="MKTSNFQKWLMVILLAIGGGTIFKSMYLREVFYYPWNEFMGVNNT FT DSGLLMSWLGFVGIVSSSIAGVIIDKVNNTRLIISFTFLAVGVTTLWQSTAPGLATQYV FT IIGILSFLANGLFLVSMVRATRLIGNASDQGKLFGFLESGRGIAGSAISAVAVAWFAMS FT ATEVEGIGSVLHAYGFLYLALGVLMWFAMPRDNHNSASGEEKAKEKISVHDILAVMKVK FT EVWFAAFSIFATISFYQGSSYLVPYLSDVYGMTAEHAGIIGMIRAYVLAILIAPVVGLL FT ADKVGSAIKVMNWLFIAGVIGVAMFLVIPQDPAMVWVLIGTLMIVGSINFALRGIMYAQ FT IEEMKVPVRLTGTVMGIMATVGFSPEMFIHALFGYWLDAYKVQGYTYMFIFMGAMFALA FT VFTSLLLLRNAKTAFKKMDGKPADTFRTAAE" FT CDS 116228..117295 FT /transl_table=11 FT /gene="STY4223" FT /product="putative HlyD family secretion protein" FT /note="Similar to Escherichia coli hypothetical 38.8 kDa FT protein in rhsB-pit intergenic region precursor YhiI FT SW:YHII_ECOLI (P37626) (355 aa) fasta scores: E(): 0, 87.0% FT id in 355 aa. Contains N-terminal signal sequence, probable FT exported protein. Coiled coil domains, residues 87 to 110 FT and 160 to 192." FT /db_xref="GOA:Q8Z261" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q8Z261" FT /protein_id="CAD08043.1" FT /translation="MDKMKRHLVWWGAGILVAVAAIAWWMLRPAGIPEGFAASNGRIEA FT TEVDIATKIAGRIDTILVSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAA FT RALLEQRQSEMRAAQSVVKQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESA FT RAALETAKAQVSAAKAAIEAARTSIIQAQTRVEAAQATERRIVADIDDSELKAPRDGRV FT QYRVAEPGEVLSAGGRVLNMVDLSDVYMTFFLPTEQAGLLKIGGDARLVLDAAPDLRIP FT ATISFVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLD FT ERVPWPDDLNVRLSQ" FT misc_feature 116363..117244 FT /note="Pfam match to entry PF00529 HlyD, HlyD family FT secretion protein, score 137.20, E-value 2.9e-37" FT CDS 117292..120033 FT /transl_table=11 FT /gene="STY4224" FT /product="hypothetical ABC transporter ATP-binding protein" FT /note="Similar to Escherichia coli hypothetical ABC FT transporter ATP-binding protein YhiH SW:YHIH_ECOLI (P37624) FT (894 aa) fasta scores: E(): 0, 89.3% id in 896 aa, and to FT Escherichia coli hypothetical ABC transporter ATP-binding FT protein YbhF SW:YBHF_ECOLI (P75776) (578 aa) fasta scores: FT E(): 0, 35.9% id in 574 aa. Predicted hydrophobic membrane FT spanning domains, integral membrane protein" FT /db_xref="GOA:Q8Z260" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8Z260" FT /protein_id="CAD08044.1" FT /translation="MTSLTLVPVPPVAQLEGVSQHYGKTVALNNITLDIPARSMVGLIG FT PDGVGKSSLLSLISGARVIEQGNVIVLGGDMRDAKHRRDVCPRIAWMPQGLGKNLYHTL FT SVYENVDFFARLFGHDKAEREARITELLNSTGLAPFRDRPAGKLSGGMKQKLGLCCALI FT HDPELLILDEPTTGVDSLSRAQFWDLIDSIRQRQTNMSVLVATAYMEEAERFDWLVAMN FT AGEILATGSAQQLRAKTHSATLEQAFIALLPEAQRQAHKPVVIPPYHAEQEEIAIEAKD FT LTMRFGKFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAWLFGQPV FT DPNDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPPAEIPARVAQMIERFMLTE FT VEDTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDK FT VTIFISTHFMNEAERCDRMSLMHAGKVLASGTPQELVQQRGAANLEAAFISWLQEAAGA FT APETPIPPSQTPAASDKPSRQGLSFRRLFSYSRREALELRRDPVRSTLALLGTVILMLI FT MGYGISMDVENLRFAVLDRDQTVSSQAWSLNLAGSRYFIEQPPLASYDELDRRMRSGEL FT AVAIEIPPNFGRDIARGTPAQIGVWVDGAMPSRAETVKGYVQAMHQSWLQEAASRQPNP FT VKQTGLLNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSVVREKELGPMINLY FT VTPTTRSEFLLGKQLPYIALGMLNFLLLCALSVFVFGVPLKGSFLTLTLAALLYVIIAT FT GLGLLISTFMKSQIAAIFGTSIITLIPATQFSGMIDPVASLEGPGRWIGEIYPTSHFLT FT IARGTFSKALDLSDLWSLFMPLLIAVPVVMGLSILLLKKQEG" FT misc_feature 117403..117963 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 216.50, E-value 3.9e-61" FT misc_feature 117424..117447 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 117733..117777 FT /note="PS00211 ABC transporters family signature" FT misc_feature 117773..117853 FT /note="DNA repeat, similar to 4091552..4091632, 76.3% FT identity in 80 nt overlap" FT misc_feature 118195..118740 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 190.60, E-value 2.4e-53" FT misc_feature 118216..118239 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 118553..118633 FT /note="DNA repeat, similar to 4090772..4090852, 76.3% FT identity in 80 nt overlap" FT CDS 120033..121257 FT /pseudo FT /transl_table=11 FT /gene="STY4225" FT /product="hypothetical ABC transporter membrane protein FT (pseudogene)" FT /note="Similar to Escherichia coli hypothetical 41.1 kDa FT protein in rhsB-pit intergenic region YhhJ SW:YHHJ_ECOLI FT (P31993) (374 aa) fasta scores: E(): 0, 92.2% id in 374 aa, FT and to Pseudomonas aeruginosa probable permease of ABC FT transporter PA5230 TR:AAG08615 (EMBL:AE004935) (374 aa) FT fasta scores: E(): 0, 69.0% id in 374 aa. Predicted FT hydrophobic membrane spanning domains, integral membrane FT protein. Contains a frameshift after codon 150. The FT sequence has been checked and is believed to be correct" FT CDS complement(121257..121658) FT /transl_table=11 FT /gene="nikR" FT /gene_synonym="STY4227" FT /product="nickel responsive regulator" FT /note="Similar to Escherichia coli nickel responsive FT regulator NikR TR:CAA70150 (EMBL:Y08952) (133 aa) fasta FT scores: E(): 0, 98.5% id in 133 aa, and to Methanococcus FT jannaschii hypothetical protein Mj0549 SW:Y549_METJA FT (Q57969) (141 aa) fasta scores: E(): 1.1e-14, 35.1% id in FT 131 aa" FT /db_xref="GOA:P64414" FT /db_xref="InterPro:IPR014864" FT /db_xref="UniProtKB/Swiss-Prot:P64414" FT /protein_id="CAD08046.1" FT /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEAT FT QEHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGD FT MGDVQHFADDVIAQRGVRHGHLQCLPKED" FT misc_feature complement(121521..121655) FT /note="Pfam match to entry PF01402 HTH_4, Helix-turn-helix FT protein, copG family, score 48.10, E-value 2e-10" FT CDS complement(121749..122327) FT /transl_table=11 FT /gene="STY4228" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 21.8 kDa FT protein in ftsY-nikA intergenic region YhhU SW:YHHU_ECOLI FT (P37623) (195 aa) fasta scores: E(): 0, 78.7% id in 188 aa, FT and to the N-terminus of Synechocystis sp lipopeptide FT antibiotics iturin A biosynthesis protein SLR0495 TR:Q55185 FT (EMBL:D64001) (246 aa) fasta scores: E(): 3.2e-11, 34.2% id FT in 149 aa" FT /db_xref="GOA:Q8Z259" FT /db_xref="InterPro:IPR008278" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z259" FT /protein_id="CAD08047.1" FT /translation="MYQIVLGKVSTLSAGQLPDALIAQAPQGVRRASWLAGRVLLSRAL FT SPLPEMVYGEQGKPAFSAGTPLWFNLSHSGDTIALLLSDEGEVGCDIEVIRPRDNWRSL FT ANAVFSLGEHAEMEAERPERQLAAFWRIWTRKEAIVKQRGGSAWQIVSVDSTLPSALSV FT SQCQLDTLSLAVCTPTPFTLTPQTITKAL" FT misc_feature complement(121803..122069) FT /note="Pfam match to entry PF01648 ACPS, FT 4'-phosphopantetheinyl transferase superfamily, score 6.50, FT E-value 0.018" FT CDS complement(122379..123428) FT /transl_table=11 FT /gene="STY4229" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 38.5 kDa FT protein in ftsY-nikA intergenic region YhhT SW:YHHT_ECOLI FT (P37622) (349 aa) fasta scores: E(): 0, 88.8% id in 349 aa, FT and to Escherichia coli hypothetical 37.5 kDa protein in FT asr-pntB intergenic region YdgG SW:YDGG_ECOLI (P77535) (344 FT aa) fasta scores: E(): 0, 48.1% id in 337 aa. Predicted FT hydrophobic membrane spanning domains, integral membrane FT protein." FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q8Z258" FT /protein_id="CAD08048.1" FT /translation="MATAQPDKTGMHILLKLASLVIILAGIHAAADIIVQLLLALFFAI FT VLNPLVTWFIRRGVKRPLAITIVVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRK FT VLHLQELMPFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLF FT EVRHVPYKLRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALMDIQF FT ALMWGVLAFLLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEP FT RMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGP FT GRPKSRLPG" FT misc_feature complement(122442..123392) FT /note="Pfam match to entry PF01594 UPF0118, Domain of FT unknown function DUF20, score 324.90, E-value 9e-94" FT CDS 123560..124777 FT /transl_table=11 FT /gene="STY4230" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 43.8 kDa FT protein in ftsY-nikA intergenic region YhhS SW:YHHS_ECOLI FT (P37621) (419 aa) fasta scores: E(): 0, 90.6% id in 405 aa, FT and to Escherichia coli from bases 2434445 to 2447012 YhhS FT TR:P77549 (EMBL:AE000321) (392 aa) fasta scores: E(): 0, FT 42.2% id in 372 aa. Predicted hydrophobic membrane spanning FT domains, integral membrane protein" FT /db_xref="GOA:Q8Z257" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z257" FT /protein_id="CAD08049.1" FT /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVH FT DAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVLGPKKIVVFGLCGCFLSGLGYLLAD FT IASAWPMINLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAM FT AMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWL FT YGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGL FT NVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSLVFPALGVVAVKAVPPQNQGA FT ALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALP FT EAASSS" FT CDS complement(124781..125338) FT /transl_table=11 FT /gene="STY4231" FT /product="putative lipoprotein" FT /note="Similar to Escherichia coli hypothetical 19.8 kDa FT protein in ftsY-nikA intergenic region YhhR SW:YHHR_ECOLI FT (P37620) (185 aa) fasta scores: E(): 0, 80.0% id in 185 aa. FT Putative N-terminal lipoprotein attachment site." FT /db_xref="UniProtKB/TrEMBL:Q8XFQ6" FT /protein_id="CAD08050.1" FT /translation="MRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPISL FT MDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANRLL FT EQQRSRDPQLQVVTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQVTL FT PADNQQKAQTTAENIINTLVIK" FT misc_feature complement(125279..125311) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(125411..126076) FT /transl_table=11 FT /gene="STY4232" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 25.3 kDa FT protein in ftsY-nikA intergenic region YhhQ SW:YHHQ_ECOLI FT (P37619) (221 aa) fasta scores: E(): 0, 89.6% id in 221 aa, FT and to Neisseria meningitidis conserved hypothetical inner FT membrane protein NMA2171 TR:CAB85383 (228 aa) fasta scores: FT E(): 0, 66.5% id in 209 aa. Predicted hydrophobic membrane FT spanning domains, integral membrane protein." FT /db_xref="InterPro:IPR003744" FT /db_xref="UniProtKB/TrEMBL:Q8XER6" FT /protein_id="CAD08051.1" FT /translation="MTPFTQSQRIKALFWLSLFHLLVIISSNYLVQLPITIFGFHTTWG FT AFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAWQGFAALANF FT NLFVARIAAASFMAYALGQILDVHVFNRLRQNRRWWLAPTASTLFGNISDTLAFFFIAF FT WRSPDAFMAGHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEISPLPAS" FT CDS 126246..126491 FT /transl_table=11 FT /gene="yhhP" FT /gene_synonym="STY4233" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 9.1 kDa FT protein in ftsY-nikA intergenic region YhhP SW:YHHP_ECOLI FT (P37618) (81 aa) fasta scores: E(): 6.6e-32, 91.1% id in 79 FT aa, and to Vibrio cholerae hypothetical protein VC0024 FT TR:Q9KVW4 (EMBL:AE004094) (82 aa) fasta scores: E(): 9e-20, FT 67.1% id in 70 aa" FT /db_xref="GOA:P67101" FT /db_xref="HSSP:1DCJ" FT /db_xref="InterPro:IPR001455" FT /db_xref="UniProtKB/Swiss-Prot:P67101" FT /protein_id="CAD08052.1" FT /translation="MSDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQTGETLLIIADD FT PATTRDIPGFCTFMEHDLLAQETEGLPYRYLLRKAH" FT misc_feature 126261..126482 FT /note="Pfam match to entry PF01206 UPF0033, Uncharacterized FT protein family UPF0033, score 150.30, E-value 3.5e-41" FT misc_feature 126279..126317 FT /note="PS01148 Uncharacterized protein family UPF0033 FT signature" FT CDS complement(126515..128158) FT /transl_table=11 FT /gene="STY4234" FT /product="methyl-accepting chemotaxis citrate transducer" FT /note="Similar to Salmonella typhimurium methyl-accepting FT chemotaxis citrate transducer tcp SW:MCPC_SALTY (Q02755) FT (547 aa) fasta scores: E(): 0, 99.8% id in 547 aa, and to FT Escherichia coli methyl-accepting chemotaxis protein I CheD FT SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 0, 53.4% FT id in 554 aa. Predicted hydrophobic membrane spanning FT domains, integral membrane protein." FT /db_xref="GOA:Q8Z256" FT /db_xref="HSSP:1QU7" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q8Z256" FT /protein_id="CAD08053.1" FT /translation="MKNIKVITGVIATLGIFSALLLVTGILFYSAVSSDRLNFQNASAL FT SYQQQELGGSFQTLIETRVTINRVAIRMLKNQRDPASLDAMNTLLTNAGASLNEAEKHF FT NNYVNSEAIAGKDPALDAQAEASFKQMYDVLQQSIHYLKADNYAAYGNLDAQKAQDDME FT QVYDQWLSQNAQLIKLASDQNQSSFTQMQWTLGIILLIVLIVLAFIWLGLQRVLLRPLQ FT RIMAHIQTIADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADSIYTGAG FT EISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASETARKGG FT RVVDNVVSTMNDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA FT GEVRTLASRSAQAAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIMGEI FT ASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAAFRIQ FT KQPRREASPTPLSKGLTPQPAAEQANWESF" FT misc_feature complement(126899..127081) FT /note="Pfam match to entry PF00015 MCPsignal, FT Methyl-accepting chemotaxis protein (MCP) signaling domain, FT score 132.10, E-value 2.4e-36" FT misc_feature complement(127214..127282) FT /note="PS00538 Bacterial chemotaxis sensory transducers FT signature" FT misc_feature complement(127367..127576) FT /note="Pfam match to entry PF00672 DUF5, HAMP domain, score FT 75.00, E-value 1.6e-18" FT misc_feature complement(127616..128032) FT /note="Pfam match to entry PF02203 TarH, Tar ligand binding FT domain homologues, score 211.20, E-value 1.6e-59" FT CDS complement(128355..130553) FT /transl_table=11 FT /gene="STY4235" FT /product="heavy metal-transporting ATPase" FT /note="Similar to Escherichia coli zinc-transporting ATPase FT ZntA SW:ATZN_ECOLI (P37617) (732 aa) fasta scores: E(): 0, FT 85.0% id in 731 aa, and to Proteus mirabilis putative FT P-type cation-translocating membrane ATPase PpaA TR:O33448 FT (EMBL:AJ001437) (692 aa) fasta scores: E(): 0, 61.2% id in FT 685 aa. Predicted hydrophobic membrane spanning domains, FT integral membrane protein." FT /db_xref="GOA:Q8Z255" FT /db_xref="HSSP:1MWY" FT /db_xref="InterPro:IPR001969" FT /db_xref="UniProtKB/TrEMBL:Q8Z255" FT /protein_id="CAD08054.1" FT /translation="MSTPDTDGKKVPPFTSFRLAPAIQKADSCCCEEHCASSAPVSTAV FT AGTRYTWKISGMDCAACARKVENAVRQIRGVNQAQVLFATEKLVVDADTDLRAQIEHAV FT QKAGYTLRSEDSRDAAPESRLKENLPLITLIIMMAISWGLEQFNHPFGQLAFIVTTLVG FT LYPIARQALRLMKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAAS FT RARKGVSALMALKPETATRLRDGVREEVAINTLRPGDIIEVAAGGRLPADGKLVSGFAS FT FDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILTLIEEAEERR FT APIERFIDRFSRIYTPVIMVIALLVTLIPPLMFDGGWQEWIYKGLTLLLIGCPCALVIS FT TPAAITSGLAAAARRGALIKGGAALEQLGRITQVAFDKTGTLTIGKPRVTAIHPASGIS FT EAELLALAAAVEQGATHPLAQAIVREAQTRDLAIPTAESQRTLAGTGIEAQVNGERILI FT CAAGKQPAAAFAGQISELENAGQTVVLVLRNETVVGVLALQDTLRDDARDAIRELHQLG FT VNGVILTGDNPRAAAAIAGELDLAFKTGLLPEDKVRAVTALNQQAPLAMVGDGINDAPA FT MKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMITLARATHANIRQNITIALGLKA FT IFLVTTLLGFTGLWLAILADTGATVLVTANALRLLRKN" FT misc_feature complement(129228..129248) FT /note="PS00154 E1-E2 ATPases phosphorylation site" FT misc_feature complement(129276..129941) FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 319.20, E-value 9.5e-96" FT misc_feature complement(130215..130406) FT /note="Pfam match to entry PF00403 HMA, FT Heavy-metal-associated domain, score 70.90, E-value FT 8.7e-19" FT misc_feature complement(130305..130394) FT /note="PS01047 Heavy-metal-associated domain" FT CDS complement(130634..131260) FT /transl_table=11 FT /gene="STY4236" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 23.8 kDa FT protein in ftsY-nikA intergenic region yhhN SW:YHHN_ECOLI FT (P37616) (208 aa) fasta scores: E(): 0, 91.3% id in 208 aa. FT Predicted hydrophobic membrane spanning domains, integral FT membrane protein" FT /db_xref="GOA:Q8XH18" FT /db_xref="InterPro:IPR012506" FT /db_xref="UniProtKB/TrEMBL:Q8XH18" FT /protein_id="CAD08055.1" FT /translation="MLWSFIAVCLSAWLYVDASYRGPAWQRWVFKPVTLLLLLLLAWQA FT PMFDAISYLVLAGLCASLVGDALTLLPRQRLLYAVGAFFLSHLLYTIYFASQMTLSFFW FT PLPLALLIVGALLIAVIWTRLEELRWPVCTFIAMTLVMVWLAGELWFFRPTAPALSAFT FT GATLLFIGNIVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL" FT CDS 131402..131773 FT /transl_table=11 FT /gene="STY4237" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 13.5 kDa FT protein in ftsY-nikA intergenic region YhhM SW:YHHM_ECOLI FT (P37615) (119 aa) fasta scores: E(): 0, 85.3% id in 116 aa. FT N-terminal hydrophobic region, probable membrane spanning FT domain" FT /db_xref="InterPro:IPR019635" FT /db_xref="UniProtKB/TrEMBL:Q8Z254" FT /protein_id="CAD08056.1" FT /translation="MSKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVVV FT SNKREKPVNDRRSRQQEVSPAGTSMRYEASFKPLNGGLEKTFRLQAQQYHALTVGDQGT FT LSYKGTRFVGFVSRTPDNE" FT CDS complement(131795..132067) FT /transl_table=11 FT /gene="STY4238" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 10.3 kDa FT protein in ftsY-nikA intergenic region YhhL SW:YHHL_ECOLI FT (P37614) (89 aa) fasta scores: E(): 4.4e-32, 85.4% id in 89 FT aa. Predicted hydrophobic membrane spanning domains, FT integral membrane protein." FT /db_xref="InterPro:IPR009525" FT /db_xref="UniProtKB/TrEMBL:Q8Z253" FT /protein_id="CAD08057.1" FT /translation="MMLINLGRLLMLFVWAFLILNLVHPFPRPLNIFVNVALVFMALMH FT GMQLALLKSTIPKAGPQMTTGEKIRIFLFSVFELLVWQKKFKNKK" FT CDS complement(132054..132650) FT /transl_table=11 FT /gene="STY4239" FT /gene_synonym="yhhF" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli 21.7 kDa protein in FT ftsY-nikA intergenic region YhhF SW:YHHF_ECOLI (P10120) FT (198 aa) fasta scores: E(): 0, 86.4% id in 198 aa, and to FT Haemophilus influenzae hypothetical protein HI0767 FT SW:YHHF_HAEIN (P44869) (193 aa) fasta scores: E(): 0, 55.4% FT id in 193 aa" FT /db_xref="GOA:Q8Z252" FT /db_xref="InterPro:IPR016065" FT /db_xref="UniProtKB/TrEMBL:Q8Z252" FT /protein_id="CAD08058.1" FT /translation="MKKPTHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFN FT WLAPVMVDAHCLDCFAGSGALGLEALSRYAAQATLLEMDRAVSQQLQKNLATLKANNAR FT VVNTNTLAFLSQPGTPHHVVFVDPPFRKGLLEETLQLLETQGWLADDALIYVESEVENG FT LPPVPANWALYREKVAGQVAYRLYQRDAQGENDVD" FT misc_feature complement(132261..132281) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature" FT CDS 132776..134251 FT /transl_table=11 FT /gene="ftsY" FT /gene_synonym="STY4240" FT /product="cell division protein" FT /note="Similar to Escherichia coli cell division protein FT FtsY SW:FTSY_ECOLI (P10121) (497 aa) fasta scores: E(): 0, FT 83.4% id in 499 aa, and to Haemophilus influenzae cell FT division protein FtsY homolog HI0768 SW:FTSY_HAEIN (P44870) FT (414 aa) fasta scores: E(): 0, 67.3% id in 370 aa" FT /db_xref="GOA:Q8Z251" FT /db_xref="HSSP:1FTS" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q8Z251" FT /protein_id="CAD08059.1" FT /translation="MAKQKKRGFFSWLGFGDKEQKQEQTEEQQIVEEQRPVEPPVETAA FT DVDAQTPAHSKAETEAFAEEVVDVTEKVQESEKPQPVEPEPTAAIEMAAPQIAVEREEL FT PLPEEVKDEAISPEEWQAEAETVEVIAAVEEEGENAAKFTDEELEAQALAAQAAEEAVM FT VVPPAEEDAPVEAIVQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLF FT EELEEQLLIADVGVETTRKIIANLTEGASRKQLKDAEALYGLLKDEMGEILAKVDEPLN FT IEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQR FT NNIPVIAQHTGADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELKKIVRVMK FT KLDEEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQF FT GIPIRYIGVGERIEDLRPFKADDFIEALFARED" FT misc_feature 133427..134236 FT /note="Pfam match to entry PF00448 SRP54, SRP54-type FT protein, score 500.40, E-value 1.4e-146" FT misc_feature 133655..133678 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 134156..134197 FT /note="PS00300 SRP54-type proteins GTP-binding domain FT signature" FT CDS 134254..134922 FT /transl_table=11 FT /gene="ftsE" FT /gene_synonym="STY4241" FT /product="cell division ATP-binding protein FtsE" FT /note="Similar to Escherichia coli cell division FT ATP-binding protein FtsE SW:FTSE_ECOLI (P10115) (222 aa) FT fasta scores: E(): 0, 95.9% id in 222 aa, and to FT Haemophilus influenzae cell division ATP-binding protein FT FtsE SW:FTSE_HAEIN (P44871) (218 aa) fasta scores: E(): 0, FT 64.4% id in 216 aa" FT /db_xref="GOA:Q8XGJ9" FT /db_xref="HSSP:1L2T" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8XGJ9" FT /protein_id="CAD08060.1" FT /translation="MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLL FT KLICGIERPSAGKIFFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPL FT IIAGASGDDIRRRVSAALDKVGLLDKARNFPIQLSGGEQQRVGIARAVVNKPAVLLADE FT PTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRQLVLSDGHLHGGLANE FT " FT misc_feature 134335..134892 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 251.70, E-value 9.7e-72" FT misc_feature 134356..134379 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 134665..134709 FT /note="PS00211 ABC transporters family signature" FT CDS 134915..135970 FT /transl_table=11 FT /gene="ftsX" FT /gene_synonym="STY4242" FT /product="cell division protein" FT /note="Similar to Escherichia coli cell division protein FT FtsX SW:FTSX_ECOLI (P10122) (352 aa) fasta scores: E(): 0, FT 92.3% id in 352 aa, and to Haemophilus influenzae cell FT division protein FtsX homolog HI0770 SW:FTSX_HAEIN (P44872) FT (310 aa) fasta scores: E(): 0, 42.2% id in 303 aa" FT /db_xref="GOA:Q8Z250" FT /db_xref="InterPro:IPR004513" FT /db_xref="UniProtKB/TrEMBL:Q8Z250" FT /protein_id="CAD08061.1" FT /translation="MNRRDAINQIRQFGGRLDRLRKSRGGTGGGRNAPGRQKPTPKPNS FT RKTNVFNEQVRYAWHGALQDLKSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAATQY FT YPSPQITVYLQKTLDDDAAARVVGQLQAEQGVEKVNYLSREDALGEFRNWSGFGGALDM FT LEENPLPAVAVVIPKLDFQSTASLNTLRDRISQINGIDEVRMDDSWFARLAALTGLVGR FT VSAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGALLGFS FT GAFLSLILSEILVMRLSSAVTEVAQVFGTKFDLNGLSFDECLLLLLVCSMIGWIAAWLA FT TVQHLRYFTPD" FT CDS 136216..137070 FT /transl_table=11 FT /gene="rpoH" FT /gene_synonym="STY4243" FT /product="RNA polymerase sigma-32 factor" FT /note="Similar to Citrobacter freundii RNA polymerase FT sigma-32 factor RpoH SW:RP32_CITFR (P11539) (284 aa) fasta FT scores: E(): 0, 97.2% id in 284 aa, and to Escherichia coli FT RNA polymerase sigma-32 factor RpoH SW:RP32_ECOLI (P00580) FT (284 aa) fasta scores: E(): 0, 96.8% id in 284 aa. Contains FT helix-turn-helix motif, residues 251 to 272, score 2058 FT (+6.20 SD)." FT /db_xref="GOA:Q8XF11" FT /db_xref="HSSP:1KU3" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q8XF11" FT /protein_id="CAD08062.1" FT /translation="MTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAERLHYQG FT DLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSF FT AVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGV FT SSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAA FT NRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAA FT IEA" FT misc_feature 136354..137055 FT /note="Pfam match to entry PF00140 sigma70, Sigma-70 FT factor, score 367.40, E-value 1.5e-106" FT misc_feature 136444..136485 FT /note="PS00715 Sigma-70 factors family signature 1" FT misc_feature 136969..137049 FT /note="PS00716 Sigma-70 factors family signature 2" FT CDS 137398..138492 FT /pseudo FT /transl_table=11 FT /gene="livJ" FT /gene_synonym="STY4244" FT /product="amino acid-binding protein (pseudogene)" FT /note="Similar to Salmonella typhimurium FT leu/ile/val/thr-binding protein precursor LivJ FT SW:LIVJ_SALTY (P17215) (365 aa) fasta scores: E(): 0, 98.4% FT id in 365 aa, and to Escherichia coli leu/ile/val-binding FT protein precursor LivJ SW:LIVJ_ECOLI (P02917) (367 aa) FT fasta scores: E(): 0, 94.2% id in 364 aa. Similar to FT STY4248, 76.2% identity in 366 aa overlap, Probable gene FT duplication. Contains N-terminal signal sequence, probable FT secreted protein. Contains an amber nonsense mutation (TAG) FT at codon 145. The sequence has been checked and is believed FT to be correct" FT misc_feature 137451..138310 FT /note="DNA repeat, similar to 4112554..4113413, 78.3% FT identity in 858 nt overlap. Probably resulted from gene FT duplication" FT misc_feature 138392..138497 FT /note="DNA repeat, similar to 4113501..4113606. 75.2% FT identity in 105 nt overlap. Probably resulted from gene FT duplication" FT CDS complement(138579..138713) FT /transl_table=11 FT /gene="STY4246" FT /product="hypothetical protein" FT /note="No database matches" FT /db_xref="UniProtKB/TrEMBL:Q8XEQ9" FT /protein_id="CAD08064.1" FT /translation="MTAGRSAKRKPDGADAYPAYMPGEKIKTTSQFSKNFALQAGGKL" FT CDS complement(138691..139074) FT /transl_table=11 FT /gene="STY4247" FT /gene_synonym="yhhK" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 14.5 kDa FT protein in livK-livJ intergenic region YhhK SW:YHHK_ECOLI FT (P37613) (127 aa) fasta scores: E(): 0, 82.5% id in 126 aa" FT /db_xref="GOA:Q8XFZ9" FT /db_xref="InterPro:IPR000182" FT /db_xref="UniProtKB/TrEMBL:Q8XFZ9" FT /protein_id="CAD08065.1" FT /translation="MKLTILRLEHFSAQDQIDLGKIWPEYSASSLSVDETHRIYAARFN FT ERLLGAVRVTLSGTQGALDSLRVREITRRRGVGQYLVEEVIRDNPNVSSWWMADVGVED FT RSVMAAFMQALGFTAQHDGWEKR" FT misc_feature complement(138721..138945) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 20.50, E-value FT 0.041" FT CDS 139496..140605 FT /transl_table=11 FT /gene="STY4248" FT /gene_synonym="livK" FT /product="leucine-specific binding protein" FT /note="Similar to Salmonella typhimurium leucine-specific FT binding protein precursor LivK SW:LIVK_SALTY (P17216) (369 FT aa) fasta scores: E(): 0, 99.2% id in 369 aa, and to FT Escherichia coli leucine-specific binding protein precursor FT LivK SW:LIVK_ECOLI (P04816) (369 aa) fasta scores: E(): 0, FT 90.8% id in 369 aa. Similar to STY4244, 76.2% identity in FT 366 aa overlap, Probable gene duplication. Contains FT N-terminal signal sequence, probable secreted protein." FT /db_xref="GOA:P0A1W7" FT /db_xref="HSSP:2LBP" FT /db_xref="InterPro:IPR000709" FT /db_xref="UniProtKB/Swiss-Prot:P0A1W7" FT /protein_id="CAD08066.1" FT /translation="MKRKAKTIIAGIVALAVSQGAMADDIKVAIVGAMSGPVAQWGDME FT FNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCSSS FT TQPASDIYEDEGILMISPGATNPELTQRGYQYIMRTAGLDSSQGPTAAKYILETVKPQR FT IAIIHDKQQYGEGLARSVQDGLKQGNANIVFFDGITAGEKDFSALIARLQKENIDFVYY FT GGYYPEMGQMLRQARANGLKTQFMGPEGVGNASLSNIAGGAAEGMLVTMPKRYDQDPAN FT KAIVEALKADKKDPSGPYVWITYAAVQSLATAMTRSASHAPLDLVKDLKANGADTVIGP FT LKWDEKGDLKGFEFGVFQWHADGSSTVAK" FT misc_feature 139538..140599 FT /note="Pfam match to entry PF01094 ANF_receptor, Receptor FT family ligand binding region, score 64.40, E-value 2.4e-15" FT misc_feature 139555..140414 FT /note="DNA repeat, similar to 4110450..4111309, 78.3% FT identity in 858 nt overlap. Probably resulted from gene FT duplication" FT misc_feature 140502..140607 FT /note="region of DNA repeat, similar to 4111391..4111496. FT 75.2% identity in 105 nt overlap. Probably resulted from FT gene duplication" FT CDS 140665..141591 FT /transl_table=11 FT /gene="STY4249" FT /gene_synonym="livH" FT /product="high-affinity branched-chain amino acid transport FT system permease protein" FT /note="Identical to Salmonella typhimurium high-affinity FT branched-chain amino acid transport system permease protein FT LivH SW:LIVH_SALTY (P30295) (308 aa) fasta scores: E(): 0, FT 100.0% id in 308 aa, and similar to Escherichia coli FT high-affinity branched-chain amino acid transport system FT permease protein LivH SW:LIVH_ECOLI (P08340) (308 aa) fasta FT scores: E(): 0, 97.4% id in 308 aa" FT /db_xref="GOA:P0A2J2" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/Swiss-Prot:P0A2J2" FT /protein_id="CAD08067.1" FT /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGE FT VYMIGSYVSFMIIAALMMMGIDTSWLLVAAGFIGAIIIASAYGWSIERVAYRPVRNSKR FT LIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWIVGSSENFSASITTMQAVIWIV FT TFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVL FT LGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKD FT VVSFALLILVLLVMPTGILGRPEVEKV" FT CDS 141588..142865 FT /transl_table=11 FT /gene="STY4250" FT /gene_synonym="livM" FT /product="high-affinity branched-chain amino acid transport FT system permease protein" FT /note="Similar to Salmonella typhimurium high-affinity FT branched-chain amino acid transport system permease protein FT LivM SW:LIVM_SALTY (P30296) (425 aa) fasta scores: E(): 0, FT 99.8% id in 425 aa, and to Escherichia coli high-affinity FT branched-chain amino acid transport system permease protein FT LivM SW:LIVM_ECOLI (P22729) (425 aa) fasta scores: E(): 0, FT 94.8% id in 425 aa. Predicted hydrophobic membrane spanning FT domains, integral membrane protein." FT /db_xref="GOA:Q8Z249" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q8Z249" FT /protein_id="CAD08068.1" FT /translation="MKPMHIAMALFSAAMFFVLAGVFMGVQLELDGTKLVVDTAADIRW FT QWIFIGTAVVFFFQLLRPMFQKAVKHVSGPKFILPAIDGSTVKQKLFLMALLVIAVAWP FT FMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLG FT FWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI FT SQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVVLSLFVINR FT LLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPE FT SFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMVLMMI FT WRPQGLLPMTRPQLKLKSGQAKGEQA" FT CDS 142862..143629 FT /transl_table=11 FT /gene="STY4251" FT /gene_synonym="livG" FT /product="high-affinity branched-chain amino acid transport FT ATP-binding protein" FT /note="Identical to Salmonella typhimurium high-affinity FT branched-chain amino acid transport ATP-binding protein FT LivG SW:LIVG_SALTY (P30293) (255 aa) fasta scores: E(): 0, FT 100.0% id in 255 aa, and similar to Escherichia coli FT high-affinity branched-chain amino acid transport FT ATP-binding protein LivG SW:LIVG_ECOLI (P22730) (255 aa) FT fasta scores: E(): 0, 96.1% id in 255 aa" FT /db_xref="GOA:P0A194" FT /db_xref="HSSP:1G9X" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:P0A194" FT /protein_id="CAD08069.1" FT /translation="MSQPLLAVNGLMMRFGGLLAVNNVSLELREREIVSLIGPNGAGKT FT TVFNCLTGFYKPTGGTITLRERHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVA FT QHQQLKTGLFSGLLKTPAFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLE FT IARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISD FT RIYVVNQGTPLANGTPEEIRNNPDVIRAYLGEA" FT misc_feature 142950..143006 FT /note="DNA repeat, similar to 4116718..4116774, 83.9% FT identity in 56 nt overlap" FT misc_feature 142952..143551 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 206.80, E-value 3.3e-58" FT misc_feature 142973..142996 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 143321..143365 FT /note="PS00211 ABC transporters family signature" FT CDS 143631..144344 FT /transl_table=11 FT /gene="STY4252" FT /gene_synonym="livF" FT /product="high-affinity branched-chain amino acid transport FT ATP-binding protein" FT /note="Identical to Salmonella typhimurium high-affinity FT branched-chain amino acid transport ATP-binding protein FT LivF liSW:LIVF_SALTY (P30294) (237 aa) fasta scores: E(): FT 0, 100.0% id in 237 aa, and similar to Escherichia coli FT high-affinity branched-chain amino acid transport FT ATP-binding protein LivF SW:LIVF_ECOLI (P22731) (237 aa) FT fasta scores: E(): 0, 96.2% id in 237 aa" FT /db_xref="GOA:P0A192" FT /db_xref="HSSP:1G6H" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:P0A192" FT /protein_id="CAD08070.1" FT /translation="MEKTMLTFEKVSAHYGKIQALHDVSLHINQGEIVTLIGANGAGKT FT TLLGTLCGDPRASSGRVVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMG FT GFFAERDRFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDE FT PSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGD FT ALLANEAVRSAYLGG" FT misc_feature 143719..143775 FT /note="DNA repeat, similar to 4115949..4116005, 83.9% FT identity in 56 nt overlap" FT misc_feature 143721..144269 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 197.80, E-value 1.7e-55" FT misc_feature 143742..143765 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 144042..144086 FT /note="PS00211 ABC transporters family signature" FT CDS 144508..144786 FT /transl_table=11 FT /gene="STY4253" FT /product="putative exported protein" FT /note="No significant database matches. Contains N-terminal FT signal sequence, probable secreted protein" FT /db_xref="UniProtKB/TrEMBL:Q8Z248" FT /protein_id="CAD08071.1" FT /translation="MIRSGACIMGTLLFAASFSVNALTSNDFDPRDPAIWQEETATPYP FT LAATTCEVRHHPDCATWEDEKSDIQRERERRDQRRLQNLYKKYSHRD" FT CDS 145018..146334 FT /transl_table=11 FT /gene="STY4254" FT /gene_synonym="ugpB" FT /product="glycerol-3-phosphate-binding periplasmic protein" FT /note="Similar to Escherichia coli FT glycerol-3-phosphate-binding periplasmic protein precursor FT UgpB SW:UGPB_ECOLI (P10904) (438 aa) fasta scores: E(): 0, FT 91.1% id in 438 aa, and to Thermotoga maritima FT glycerol-3-phosphate ABC transporter, periplasmic FT glycerol-3- phosphate-binding protein TM1120 TR:Q9X0K4 FT (EMBL:AE001770) (436 aa) fasta scores: E(): 0, 31.6% id in FT 427 aa. Contains N-terminal signal sequence, probable FT secreted protein." FT /db_xref="GOA:Q8XG55" FT /db_xref="InterPro:IPR006061" FT /db_xref="UniProtKB/Swiss-Prot:Q8XG55" FT /protein_id="CAD08072.1" FT /translation="MISLRHTALGLALSLAFTGQALAVTTIPFWHSMEGELGKEVDSLA FT QRFNQANPDYKIVPVYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPV FT YEVFKDAGINFDESQFVPTVAGYYTDAKSGHLLSQPFNSSTPVLYYNKDAFKKAGLDPE FT QPPKTWQELADYTAKLRAAGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDGTDAV FT LEFNKPEQVKHIALLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLANIRQYA FT KFNYGVGMMPYDADIKGAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKPENAAEW FT HQKTGYLPITTAAYELTREQGYYDKNPGADIATRQMLNKPPLPFTKGLRLGNMPQIRTI FT VDEELESVWTGKKTPQQALDTAVDRGNQLLRRFEKASKS" FT misc_feature 145414..146277 FT /note="Pfam match to entry PF01547 SBP_bacterial_1, FT Bacterial extracellular solute-binding protein, score FT 211.20, E-value 1.5e-59" FT misc_feature 145435..145488 FT /note="PS01037 Bacterial extracellular solute-binding FT proteins" FT CDS 146439..147326 FT /transl_table=11 FT /gene="STY4255" FT /gene_synonym="ugpA" FT /product="glycerol-3-phosphate transport system permease FT protein" FT /note="Similar to Escherichia coli sn-glycerol-3-phosphate FT transport system permease protein UgpA SW:UGPA_ECOLI FT (P10905) (295 aa) fasta scores: E(): 0, 93.2% id in 295 aa, FT and to Thermotoga maritima glycerol-3-phosphate ABC FT transporter, permease protein TM1121 TR:Q9X0K5 FT (EMBL:AE001770) (302 aa) fasta scores: E(): 0, 38.1% id in FT 286 aa. Predicted hydrophobic membrane spanning domains, FT integral membrane protein." FT /db_xref="GOA:Q8Z247" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z247" FT /protein_id="CAD08073.1" FT /translation="MSSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSLQSVD FT PFGFSSQFVGLENFVALFHDSYYLDAFWTTIKFSALVTFSGLLVSLFFAALVDYVVRGS FT RFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLGEFGYDWNHAQNSGQAMFLVVF FT ASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVN FT LVYAFFDTFPVIDAATAGGPVQATTTLIYKIYCEGFTGLDLSASAAQSVVLMFLVIILT FT VVQFRYVESKVRYQ" FT misc_feature 146976..147203 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 66.60, E-value 5.4e-16" FT misc_feature 146979..147065 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS 147323..148168 FT /transl_table=11 FT /gene="STY4256" FT /gene_synonym="ugpE" FT /product="sn-Glycerol-3-phosphate transport system permease FT protein" FT /note="Similar to Escherichia coli sn-glycerol-3-phosphate FT transport system permease protein UgpE SW:UGPE_ECOLI FT (P10906) (281 aa) fasta scores: E(): 0, 90.7% id in 281 aa, FT and to Thermotoga maritima glycerol-3-phosphate ABC FT transporter, permease protein TM1122 TR:Q9X0K6 FT (EMBL:AE001770) (276 aa) fasta scores: E(): 0, 38.2% id in FT 280 aa. Predicted hydrophobic membrane spanning domains, FT integral membrane protein." FT /db_xref="GOA:Q8Z246" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z246" FT /protein_id="CAD08074.1" FT /translation="MIENRRGLTIFSHTMLILGIAVILFPLYVAFVAATLDDRAVFETP FT MTLLPGTQLLENIKTIWVNGVGVNSAPFWLMMLNSFIMAFSITVGKITVSMLSAFAIVW FT FRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKMLNSYAGLTLPLMASATATFLFR FT QFFMTLPDELVEAARIDGASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWPLLII FT TDVNLGTAVAGIKGMIATGEGTTQWNQVMAAMLLTLIPPVVIVLAMQRAFVRGLVDSEK FT " FT misc_feature 147815..148051 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 78.30, E-value 1.6e-19" FT misc_feature 147818..147904 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS 148171..149241 FT /transl_table=11 FT /gene="STY4257" FT /gene_synonym="ugpC" FT /product="sn-Glycerol-3-phosphate transport ATP-binding FT protein" FT /note="Similar to Escherichia coli sn-glycerol-3-phosphate FT transport ATP-binding protein UgpC SW:UGPC_ECOLI (P10907) FT (356 aa) fasta scores: E(): 0, 88.2% id in 356 aa, and to FT Rhizobium sp probable ABC transporter ATP-binding protein FT W:Y4OS_RHISN (P55604) (371 aa) fasta scores: E(): 0, 51.8% FT id in 357 aa" FT /db_xref="GOA:Q8Z245" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR013611" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z245" FT /protein_id="CAD08075.1" FT /translation="MAGLKLQAVTKSWGGKTQVIQPLTLDVADGEFIVMVGPSGCGKST FT LLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIR FT GMSKAHIEERVREAARILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDEPLS FT NLDAKLRVQMRLELQHLHRRLRTTSLYVTHDQVEAMTLAQRVMVMNKGVAEQIGTPVEV FT YEKPASRFVASFIGSPAMNLLDGVISASGDRFELPGGLALPIGAGYRGHAGRKMTLGIR FT PEHIALSSQAEGGVPLTVDTLEILGADNLAHGRWGDQKLVVRLAHQQRPAAGSTLWLRL FT PEHQRHLFDGETGQRV" FT misc_feature 148258..148803 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 219.90, E-value 3.9e-62" FT misc_feature 148279..148302 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 148573..148617 FT /note="PS00211 ABC transporters family signature" FT CDS 149238..149978 FT /transl_table=11 FT /gene="STY4258" FT /gene_synonym="ugpQ" FT /product="glycerophosphoryl diester phosphodiesterase" FT /EC_number="3.1.4.46" FT /note="Similar to Escherichia coli glycerophosphoryl FT diester phosphodiesterase UgpQ SW:UGPQ_ECOLI (P10908) (247 FT aa) fasta scores: E(): 0, 87.3% id in 244 aa, and to FT Alcaligenes eutrophus ORF1 TR:Q44028 (EMBL:X91877) (248 aa) FT fasta scores: E(): 0, 52.1% id in 242 aa" FT /db_xref="GOA:Q8Z244" FT /db_xref="InterPro:IPR004129" FT /db_xref="UniProtKB/TrEMBL:Q8Z244" FT /protein_id="CAD08076.1" FT /translation="MSNWPYPHIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLS FT KDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGGWFSGEFKGEPLPLLSQVAERC FT RKHGMMANIEIKPTTGSGRLTGRVVALAARELWAGMTPPLLSSFEIEALEAAQAAVPEL FT PRGLLLDKWREDWRELTTRLGCVSLHLNHKLLDETRVQEIKAAGLRILVYTVNQPQRAA FT ELLRWGVDCICTDRIDDIGPHFQF" FT CDS complement(149975..150346) FT /transl_table=11 FT /gene="STY4259" FT /product="hypothetical protein" FT /note="Poor database matches, partial similarity to FT Escherichia coli hypothetical 16.6 kDa protein in ggt-ugpQ FT intergenic region precursor YhhA SW:YHHA_ECOLI (P23850) FT (146 aa) fasta scores: E(): 5.8e-12, 59.2% id in 147 aa. FT Contains N-terminal signal sequence, probable secreted FT protein. Glutamine rich protein, 25 residues out of 123." FT /db_xref="UniProtKB/TrEMBL:Q8Z243" FT /protein_id="CAD08077.1" FT /translation="MKRLLLITALLPFAVLAQPINTMNNPNQPGYQIPSQQRMQTQMQT FT QARSQQQNLQSQLNANTQRVQQGQPGNGMLGQQTLPNTQGGMLSGSGNPDRMLNHSQPM FT LQQDSGTPQPDIPLKTISP" FT CDS 150472..152214 FT /transl_table=11 FT /gene="ggt" FT /gene_synonym="STY4260" FT /product="gamma-glutamyltranspeptidase precursor" FT /EC_number="2.3.2.2" FT /note="Similar to Escherichia coli FT gamma-glutamyltranspeptidase precursor ggt SW:GGT_ECOLI FT (P18956) (580 aa) fasta scores: E(): 0, 91.4% id in 580 aa, FT and to Helicobacter pylori J99 gamma-glutamyltranspeptidase FT ggt TR:Q9ZK95 (EMBL:AE001532) (567 aa) fasta scores: E(): FT 0, 52.7% id in 537 aa. Contains N-terminal signal sequence, FT probable secreted protein." FT /db_xref="GOA:Q8Z242" FT /db_xref="InterPro:IPR000101" FT /db_xref="UniProtKB/TrEMBL:Q8Z242" FT /protein_id="CAD08078.1" FT /translation="MKPTFMRWVAIAALLAGGTFSAVANPPVAPPVSYGVEEDVFHPVR FT ATQGMVASVDAMATQVGVDILKQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLLRTK FT DGATTAIDFREMAPAAATRDMFLDDQGNADAKKSLTSHLASGTPGTVAGFSLALEKYGT FT MPLNKVVRPAMKLAEEGFVVNDALADDLKTYGSEVIPNHENSKAIFWKDGEPLKKGDKL FT IQKNLAKSLEMIAENGPAAFYKGAIADQIAGEMQKNGGLMTKEDLASYKAVERTPISGD FT YRGYQVFSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEY FT LGDPDFVKVPWQALTNKAYAKTLADQIDINKAKPSSQIKPGKLAPYESNQTTHFSVVDK FT DGNAVAVTYTLNTTFGTGIVAGNTGILLNNQMDDFSAKPGVPNVYGLVGGDANAVEPKK FT RPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDFGMNVAEATNAPRFHHQ FT WLPDELRVEKGFSPDTLKLLEQKGQKVALKEAMGSTQSIMVGPDGELYGASDPRSVDDL FT TAGY" FT misc_feature 150658..152199 FT /note="Pfam match to entry PF01019 G_glu_transpept, FT Gamma-glutamyltranspeptidase, score 962.40, E-value FT 1.1e-285" FT misc_feature 151642..151716 FT /note="PS00462 Gamma-glutamyltranspeptidase signature" FT CDS complement(152259..153293) FT /transl_table=11 FT /gene="STY4261" FT /product="puative phophotriesterase" FT /note="Similarity to eukaryotic phosphotriesterases related FT proteins. Similar to Rattus norvegicus phosphotriesterase FT related protein SW:PTER_RAT (Q63530) (349 aa) fasta scores: FT E(): 3.3e-22, 30.1% id in 356 aa, and to Mus musculus FT phosphotriesterase related protein SW:PTER_MOUSE (Q60866) FT (349 aa) fasta scores: E(): 6.1e-22, 29.2% id in 359 aa" FT /db_xref="GOA:Q8XFU6" FT /db_xref="HSSP:1PTA" FT /db_xref="InterPro:IPR017947" FT /db_xref="UniProtKB/TrEMBL:Q8XFU6" FT /protein_id="CAD08079.1" FT /translation="MKGFLQTVTGPVAHTDMGLTLPHEHLFNDLSSVVDEPHYAFSQQL FT VGKKVSADLQWGLKHDPYCCADNMDRKEIDDVIFEINNFMSLGGRTIVDATGSESIGRD FT ASALREVALKTGLNIVASSGPYLEKFESTRIHKPVELLASLIDKELNQGIGETDIRAGM FT IGEIGVSPAFTQAERNSLRAASLAQCNNPHTAMNIHMPGWLRLGDEVLDIVLEEMNVSP FT AKVSLAHSDPSGKDVVYQRKMLDRGVWLEFDMIGLDITFPKEGVAPGVQETADAVANLI FT ALGYADQIVLSHDVFLKQMWAKNGGNGWGFVPNVFLAYLAARGVDNDTLRKLCIDNPAR FT LLTA" FT misc_feature complement(152271..153056) FT /note="Pfam match to entry PF02126 PTE, Phosphotriesterase FT family, score 99.80, E-value 4.7e-26" FT misc_feature complement(153216..153242) FT /note="PS01322 Phosphotriesterase family signature 1" FT CDS complement(153290..154261) FT /transl_table=11 FT /gene="STY4262" FT /product="putative membrane protein" FT /note="Weakly similar to Bacillus sp hypothetical 42.1 kDa FT protein in intracellular alkaline protease 3'region FT SW:YISP_BACSP (P29156) (379 aa) fasta scores: E(): 0.0039, FT 26.6% id in 256 aa. Predicted hydrophobic membrane spanning FT domains, integral membrane protein." FT /db_xref="InterPro:IPR006750" FT /db_xref="UniProtKB/TrEMBL:Q8Z241" FT /protein_id="CAD08080.1" FT /translation="MNKNKYSTPLLMLATILAGMLSPMQSAVNGQLGHWLQDGNACAVI FT SFASGLVVMFFIIIARKETRQQFASIPTLIKKRKIPLWNWFAGLCGAMVVFSEGASASA FT LGVATFQTALISALLLSGLLCDRFGIGVEEKKYFTPWRITGALFAVIATIFVVSPQWHS FT TSFILLAILPFLAGLLAGWQPAGNAKVAEATGSMLVSITWNFIVGFCVLGAALAIRIAL FT GHVTIQLPDTWWMYLGGPLGLLSIGLMAILVRGLGLLMLGVASTAGQLLGSVLIDELIP FT SLGNTVYLVTIIGTLFALVGAIVTTIPEYRASKMAQKMEVSE" FT CDS complement(154315..155076) FT /transl_table=11 FT /gene="STY4263" FT /product="hypothetical protein" FT /note="Similar to Salmonella typhimurium ORF 245 protein FT TR:Q9Z4S4 (EMBL:AJ224978) (245 aa) fasta scores: E(): 0, FT 64.1% id in 245 aa" FT /db_xref="InterPro:IPR017027" FT /db_xref="UniProtKB/TrEMBL:Q8Z240" FT /protein_id="CAD08081.1" FT /translation="MNNTQKKLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLEC FT LRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNA FT LESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVIMLDGDDRVEKPEGIC FT AEAVSPEHPVVNGFSDYPVFLGYNQVVARDDADVVLTINNDPLLVFGEYQQGKTACFMS FT DCSPHWGTQQFMSWPFYTDLWVNTLQFIARK" FT misc_feature complement(154426..154449) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(155092..156306) FT /transl_table=11 FT /gene="STY4264" FT /product="putative ribokinase" FT /note="Similar to Salmonella typhimurium ORF 408 protein FT TR:Q9Z4S5 (EMBL:AJ224978) (408 aa) fasta scores: E(): 0, FT 46.9% id in 401 aa. The C-terminal region is similar to FT Escherichia coli ribokinase RbsK SW:RBSK_ECOLI (P05054) FT (309 aa) fasta scores: E(): 9.1e-31, 35.7% id in 308 aa. FT N-terminus is similar to the deoR family of transcriptional FT regulators and contains a helix-turn-helix motif, residues FT 19 to 40, score 1114 (+2.98 SD)." FT /db_xref="GOA:Q8Z239" FT /db_xref="HSSP:1RKD" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q8Z239" FT /protein_id="CAD08082.1" FT /translation="MKFERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQ FT GYLTRCHGGAFITLDSLDNVAKNEIAYVLEKYESAQKIKKGLSAMKNNVCVIGSFNVDI FT ISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINF FT INSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVH FT SDIVLVQLETNYEALQQTIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGL FT LANMAVNDIESAKCAAKIIHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAG FT AGDAFNGALSSGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHRIQGSHYKQ FT TISTH" FT misc_feature complement(155257..155298) FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2" FT misc_feature complement(155263..155925) FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 118.20, E-value 3.8e-36" FT misc_feature complement(156142..156294) FT /note="Pfam match to entry PF00455 deoR, Bacterial FT regulatory proteins, deoR family, score 53.30, E-value FT 5.3e-14" FT CDS complement(156571..157059) FT /transl_table=11 FT /gene="STY4265" FT /product="putative acetyltransferase" FT /note="Possible acetyltransferase. Similar to Escherichia FT coli hypothetical 18.8 kDa protein in gntR-ggt intergenic FT region YhhY SW:YHHY_ECOLI (P46854) (162 aa) fasta scores: FT E(): 0, 81.5% id in 162 aa" FT /db_xref="GOA:Q8Z238" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q8Z238" FT /protein_id="CAD08083.1" FT /translation="MSEIVIRHAEPKDYDAIRQIHAQPEVYHNTLQVPHPSLEMWQARL FT TEQAGVKQLVACIDDIVVGHLSIQVTQRPRRSHVADFGICVDARWHNRGIASALIRTMI FT DMCDNWLRVERIELTVFVDNEPAVAVYKKYGFEIEGTGKKYGLRNGEYVDTYFMARVK" FT misc_feature complement(156649..156888) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 70.10, E-value FT 4.7e-17" FT CDS 157526..158563 FT /transl_table=11 FT /gene="STY4266" FT /product="putative oxidoreductase" FT /note="Similar to Escherichia coli putative oxidoreductase FT in gntR-ggt intergenic region YhhX SW:YHHX_ECOLI (P46853) FT (345 aa) fasta scores: E(): 0, 91.9% id in 345 aa, and to FT Escherichia coli hypothetical oxidoreductase in add-nth FT intergenic region YdgJ SW:YDGJ_ECOLI (P77376) (346 aa) FT fasta scores: E(): 0, 34.9% id in 347 aa" FT /db_xref="GOA:Q8Z237" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z237" FT /protein_id="CAD08084.1" FT /translation="MTLHCAFIGFGKSTTRYHLPYVLNRKDTWHVAHIFRRHAKPEEQA FT PQYSHIHFTSDLDEVLGDPQVKLVIVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAE FT AKVLFELARSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGKIVEIESHFDYYRPVAETK FT PGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGALKAI FT VKTSHLVKIDYPKFIVHGTKGSFVKYGIDQQETSLKANIMPGEPGFAADESVGVLEYVN FT DEGVTVKEEVKPETGDYGRVYDALYQTLTIGTPNYVKESEVLTNLEILERAFEQATPAT FT ITLAK" FT misc_feature 157532..158242 FT /note="Pfam match to entry PF01408 GFO_IDH_MocA, FT Oxidoreductase family, score 252.60, E-value 5.2e-72" FT misc_feature 157541..157564 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 158687..159382 FT /transl_table=11 FT /gene="STY4267" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli 26.3 kDa protein in FT gntR-ggt intergenic region Yhhw SW:YHHW_ECOLI (P46852) (231 FT aa) fasta scores: E(): 0, 93.9% id in 231 aa, and to FT Synechocystis sp hypothetical 25.7 kDa protein SLL1773 FT TR:P73623 (EMBL:D90908) (232 aa) fasta scores: E(): 0, FT 51.1% id in 233 aa" FT /db_xref="InterPro:IPR012093" FT /db_xref="UniProtKB/TrEMBL:Q8XFI4" FT /protein_id="CAD08085.1" FT /translation="MIYLRKANDRGHANHGWLDSWHTFSFADYYDPNFMGFSALRVIND FT DVIDAGQGFGTHPHKDMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGVRHSEY FT NPSKTDRLRLYQIWIIPQETGITPRYEQRRFDAAQGKQLVLSPDARDGSLKVHQDMELY FT RWALLKDEQSVHQIAAERRVWIQVVKGNVTINGTKATTSDGLAIWDEQAISIHADSDSE FT VLLFDLPPV" FT CDS 159749..160744 FT /transl_table=11 FT /gene="STY4268" FT /gene_synonym="gntR" FT /product="gluconate utilization operon repressor" FT /note="Similar to Escherichia coli gluconate utilization FT system Gnt-I transcriptional repressor GntR SW:GNTR_ECOLI FT (P46860) (331 aa) fasta scores: E(): 0, 97.3% id in 331 aa, FT and to Escherichia coli L-idonate regulatory protein IdnR FT SW:IDNR_ECOLI (P39343) (332 aa) fasta scores: E(): 0, 45.8% FT id in 332 aa. Contains helix-turn-helix motif, residues 6 FT to 27, score 1844 (+5.47 SD)." FT /db_xref="GOA:Q8XFA4" FT /db_xref="HSSP:1LCC" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q8XFA4" FT /protein_id="CAD08086.1" FT /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALD FT ELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIEAVTDAHGYQTMLAHYGYK FT PEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAVGFD FT NFEAARQMTAAIIARGHRHIAYLGARLDERTIIKQKGYEQAMRDAGLVPYSVMMEQSSS FT YSSGIELMRQARREYPQLDGIFCTNDDLAVGAAFECQRLGLKIPDDMAIAGFHGHDIGQ FT VMEPRLASVLTPRERMGSIGAERLLARIRGETVTPKMLDLGFTLSPGGSI" FT misc_feature 159758..159841 FT /note="Pfam match to entry PF00356 lacI, Bacterial FT regulatory proteins, lacI family, score 42.70, E-value FT 1.2e-10" FT misc_feature 159770..159826 FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature" FT misc_feature 159932..160651 FT /note="Pfam match to entry PF00532 Peripla_BP_like, FT Periplasmic binding proteins and sugar binding domain of FT the LacI family., score 125.90, E-value 7.3e-34" FT CDS 160883..161416 FT /transl_table=11 FT /gene="gntK" FT /gene_synonym="STY4269" FT /product="putative gluconokinase" FT /EC_number="2.7.1.12" FT /note="Similar to Escherichia coli thermoresistant FT gluconokinase GntK SW:GNTK_ECOLI (P46859) (175 aa) fasta FT scores: E(): 0, 96.0% id in 174 aa and to Escherichia coli FT thermosensitive gluconokinase IdnK SW:IDNK_ECOLI (P39208) FT (187 aa) fasta scores: E(): 5.6e-32, 49.7% id in 153 aa" FT /db_xref="GOA:Q8XEY7" FT /db_xref="HSSP:1KO1" FT /db_xref="InterPro:IPR006001" FT /db_xref="UniProtKB/TrEMBL:Q8XEY7" FT /protein_id="CAD08087.1" FT /translation="MSTTNHDHHVYVLMGVSGSGKSAVASAVAHQLHAAFLDGDFLHPR FT CNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKISLIVCSALKKHYRDLLREGNPN FT LSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADERDVLVVDIDQPLEGV FT VASTIEVINKGSTL" FT misc_feature 160925..160948 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 161413..162753 FT /transl_table=11 FT /gene="STY4270" FT /gene_synonym="gntU" FT /product="low-affinity gluconate transporter" FT /note="Similar to Escherichia coli low-affinity gluconate FT transporter SW:GNTU_ECOLI (P46858) (446 aa) fasta scores: FT E(): 0, 97.3% id in 446 aa, and to Pseudomonas aeruginosa FT gluconate permease GnuT SW:GNUT_PSEAE (Q9ZIJ1) (450 aa) FT fasta scores: E(): 0, 39.9% id in 444 aa. Predicted FT hydrophobic membrane spanning domains, integral membrane FT protein." FT /db_xref="GOA:Q8Z236" FT /db_xref="InterPro:IPR003474" FT /db_xref="UniProtKB/TrEMBL:Q8Z236" FT /protein_id="CAD08088.1" FT /translation="MSTLTLVLTAVGSVLLLLFLVMKARMHAFVALMVVSMGAGLFSGM FT PLDKIAATMEKGMGGTLGFLAIVVALGAMFGKILHETGAVDQIAVKMLKSFGHNRAHYA FT IGLAGLICALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLLPGPA FT PMLLASQMHADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELRIPDDITEPHLGEGK FT MPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGL FT AMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPI FT AITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNFSGAQMAALSICIAGGSIVVSH FT VNDAGFWLFGKFTGATEAQTLKTWTMMETILGTVGAIVGMIAFQLLS" FT CDS 163176..164282 FT /transl_table=11 FT /gene="STY4271" FT /gene_synonym="asd" FT /product="aspartate-semialdehyde dehydrogenase" FT /EC_number="1.2.1.11" FT /note="Similar to Escherichia coli aspartate-semialdehyde FT dehydrogenase SW:DHAS_ECOLI (P00353) (367 aa) fasta scores: FT E(): 0, 95.9% id in 368 aa, and to Shigella sonnei FT aspartate semialdehyde dehydrogenase TR:AAC72855 FT (EMBL:AF101226) (367 aa) fasta scores: E(): 0, 95.9% id in FT 368 aa" FT /db_xref="GOA:P0A1F9" FT /db_xref="HSSP:1BRM" FT /db_xref="InterPro:IPR012280" FT /db_xref="UniProtKB/Swiss-Prot:P0A1F9" FT /protein_id="CAD08089.1" FT /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQFGQAAP FT TFGDTSTGTLQDAFDLDALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASTLRM FT KDDAIIILDPVNQDVITDGLNNGVKTFVGGNCTVSLMLMSLGGLFAHNLVDWVSVATYQ FT AASGGGARHMRELLTQMGQLYGHVADELATPSSAILDIERKVTALTRSGELPVDNFGVP FT LAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTASVIPVDGLCVRVGALRCHSQAFTI FT KLKKEVSIPTVEELLAAHNPWAKVVPNDRDITMRELTPAAVTGTLTTPVGRLRKLNMGP FT EFLSAFTVGDQLLWGAAEPLRRMLRQLA" FT misc_feature 163179..164261 FT /note="Pfam match to entry PF01118 Semialdhyde_dh, FT Semialdehyde dehydrogenase, score 474.10, E-value 1.1e-138" FT misc_feature 163959..164003 FT /note="PS01103 Aspartate-semialdehyde dehydrogenase FT signature" FT CDS 164658..166844 FT /transl_table=11 FT /gene="glgB" FT /gene_synonym="STY4272" FT /product="1,4-alpha-glucan branching enzyme" FT /EC_number="2.4.1.18" FT /note="Similar to Escherichia coli 1,4-alpha-glucan FT branching enzyme GlgB SW:GLGB_ECOLI (P07762) (728 aa) fasta FT scores: E(): 0, 93.3% id in 728 aa, and to Haemophilus FT influenzae 1,4-alpha-glucan branching enzyme GlgB FT SW:GLGB_HAEIN (P45177) (730 aa) fasta scores: E(): 0, 64.6% FT id in 725 aa" FT /db_xref="GOA:Q8Z235" FT /db_xref="HSSP:1M7X" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z235" FT /protein_id="CAD08090.1" FT /translation="MSSRIDRDVINALIAGHFADPFSVLGMHQTQAGLEVRALLPDATD FT VWVIEPKTGRKVGKLECLDARGFFCGVLPRRKNFFRYQLAVTWHGQQNLIDDPYRFGPL FT IQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRR FT HPMRLRKESGIWELFIPGAHNGQLYKFELLDANGNLRIKADPYAFEAQMRPETASMICG FT LPEKVTPSEERQKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGF FT THLELLPVNEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFINAAHAAGLNVILDWVPGH FT FPSDEFSLAEFDGTHLYEHSDPREGYHQDWNTLIYNYGRREVSNYLVGNALYWMERFGI FT DALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRIIGEQVPGAVSMAE FT ESTDFSGVTRPPETGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGMLYNHTE FT NFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGR FT EWNHDASLDWHLLEGGDNWHHGVQRLVRDLNHTYRHHKALHELDFDAYGFEWLVVDDNE FT RSVLIFVRRDKAGNEIIVASNFTPVPRHDYRFGINQPGRWREILNTDSMHYHGSNTGNG FT GVVHSDEIESHGRQHSLNLTLPPLATIWLMREGE" FT misc_feature 165387..166661 FT /note="Pfam match to entry PF00128 alpha-amylase, Alpha FT amylase, score -51.40, E-value 7.2e-05" FT CDS 166841..168805 FT /transl_table=11 FT /gene="glgX" FT /gene_synonym="STY4273" FT /product="glycogen operon protein" FT /EC_number="3.2.1.-" FT /note="Similar to Escherichia coli glycogen operon protein FT GlgX SW:GLGX_ECOLI (P15067) (657 aa) fasta scores: E(): 0, FT 84.8% id in 657 aa, and to Haemophilus influenzae glycogen FT operon protein GlgX SW:GLGX_HAEIN (P45178) (659 aa) fasta FT scores: E(): 0, 52.4% id in 636 aa" FT /db_xref="GOA:Q8Z234" FT /db_xref="HSSP:1BF2" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z234" FT /protein_id="CAD08091.1" FT /translation="MTQLAIGEATPHGATYDGHGVNFTLFSAHAERVELCVFDSRGNER FT RYDLPGRRGDVWHGYLAGARPGLRYGYRVHGPWQPAQGHRFNPAKLLLDPYARQVEGEL FT KDHPLLHGGHDEPDYRDNAAVAPKSVVISDHYDWEDDAAPRTPWGKTVIYEAHVKGLTY FT LHPELPQEIRGTYKALGHPVMVAYFKQLGITALELLPVAQFASEPRLQRMGLTNYWGYN FT PMAMFALHPAWASSPETALDEFRDAVKALHRAGIEVILDIVLNHSAELDLDGPTFSLRG FT IDNRSYYWIRDDGDYHNWTGCGNTLNLSHPGVVEYACECLRYWMETCHVDGFRFDLASV FT MGRTPTFRQDAPLFAAIKACPVLSTVKLIAEPWDIGEGGYQVGNFPPPFAEWNDHFRDA FT ARRFWLPRNLTTGEFACRFAASSDVFKRNGRAPGASVNLLTAHDGFTLRDCVCFNQKHN FT EANGEENRDGTNSNYSDNHGKEGLGGPLDLMERRRDSIHALLATLLLSQGTPMLLAGDE FT HGHSQHGNNNAYCQDNALTWLDWQQANRGLTTFTAALIRLRQQIPALTGNSWWEEGDGN FT VRWLNKNAQPLSADEWQNGPKLMQILLSDRFLIAINATLEVTDIVLPEGEWRAVPPFAG FT EDNPVITAVWQGLCVFQRG" FT misc_feature 167216..168649 FT /note="Pfam match to entry PF00128 alpha-amylase, Alpha FT amylase, score -11.00, E-value 1e-06" FT CDS 168820..170115 FT /transl_table=11 FT /gene="glgC" FT /gene_synonym="STY4274" FT /product="glucose-1-phosphate adenylyltransferase" FT /EC_number="2.7.7.27" FT /note="Similar to Salmonella typhimurium FT glucose-1-phosphate adenylyltransferase GlgC SW:GLGC_SALTY FT (P05415) (431 aa) fasta scores: E(): 0, 96.3% id in 432 aa, FT and to Escherichia coli glucose-1-phosphate FT adenylyltransferase GlgC SW:GLGC_ECOLI (P00584) (430 aa) FT fasta scores: E(): 0, 92.3% id in 430 aa" FT /db_xref="GOA:Q8Z233" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z233" FT /protein_id="CAD08092.1" FT /translation="MVSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAV FT HFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWSLFSEEMNEFVDLLPA FT QQRMKGENWYRGTADAVTQNLDIIRCYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARC FT TVACMPVPIKEATAFGVMAVDENDKIIDFVEKPANPPAMPGDASKSLASMGIYVFDADY FT LYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLE FT AYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCII FT SGSVVVQSVLFPRVRINSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACIIPEGMVIGEN FT AEEDARRFYRSEEGIVLVTREMLRKLQVKQER" FT misc_feature 168880..169698 FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score 348.70, E-value 6.5e-101" FT misc_feature 168895..168954 FT /note="PS00808 ADP-glucose pyrophosphorylase signature 1" FT misc_feature 169156..169182 FT /note="PS00809 ADP-glucose pyrophosphorylase signature 2" FT misc_feature 169450..169482 FT /note="PS00810 ADP-glucose pyrophosphorylase signature 3" FT CDS 170115..171548 FT /transl_table=11 FT /gene="glgA" FT /gene_synonym="STY4275" FT /product="glycogen synthase" FT /EC_number="2.4.1.21" FT /note="Similar to Escherichia coli glycogen synthase GlgA FT SW:GLGA_ECOLI (P08323) (477 aa) fasta scores: E(): 0, 93.9% FT id in 477 aa, and to Haemophilus influenzae glycogen FT synthase GlgA SW:GLGA_HAEIN (P45179) (476 aa) fasta scores: FT E(): 0, 57.1% id in 476 aa" FT /db_xref="GOA:Q8Z232" FT /db_xref="InterPro:IPR013534" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z232" FT /protein_id="CAD08093.1" FT /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDVRVLLPGFP FT DIRRGIPDAHVVSRRDTFAGKISLLFGHYNGVGIYLIDAPHLYERPGSPYHDTNLYAYI FT DNVLRFALLGWVGCEMACGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNL FT AYQGMFYAKHMDDIELPWSFFNMHGLEFNGQLSFLKAGLYYADHITAVSPTYAREITEP FT QFAYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDTLEEKAENKRQLQ FT IAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLA FT AAAEHPGQAGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTG FT GLADTVSDSSLENLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAM FT DFSWQVAAKSYRELYYRLK" FT misc_feature 170970..171479 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 33.90, E-value FT 3.7e-08" FT CDS 171568..174015 FT /transl_table=11 FT /gene="glgP" FT /gene_synonym="STY4276" FT /product="glycogen phosphorylase" FT /EC_number="2.4.1.1" FT /note="Similar to Escherichia coli glycogen phosphorylase FT GlgP SW:PHSG_ECOLI (P13031) (815 aa) fasta scores: E(): 0, FT 93.1% id in 815 aa, and to Haemophilus influenzae glycogen FT phosphorylase GlgP SW:PHSG_HAEIN (P45180) (821 aa) fasta FT scores: E(): 0, 61.4% id in 814 aa" FT /db_xref="GOA:Q8Z231" FT /db_xref="HSSP:1EM6" FT /db_xref="InterPro:IPR011833" FT /db_xref="UniProtKB/TrEMBL:Q8Z231" FT /protein_id="CAD08094.1" FT /translation="MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNAT FT LFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKGALEA FT MGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVDG FT RQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPG FT YDTDATNTLRLWNAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGREL FT RLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLNDTHPVLSIPELMRLLIDEHK FT FSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQ FT YPNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFP FT TRFCNVTNGVTPRRWLALANPPLSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVR FT QAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKENP FT EADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLA FT QVIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQEHVGEENIFIFG FT NTAEEVEALRRQGYKPRDYYEKDEELHQVLTQIGNGVFNPEEPGRYRDLVDSLINFGDH FT YQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDRTIKEYAENIWHIDP FT VRL" FT misc_feature 171868..174003 FT /note="Pfam match to entry PF00343 phosphorylase, FT Carbohydrate phosphorylases, score 1888.60, E-value 0" FT misc_feature 173527..173565 FT /note="PS00102 Phosphorylase pyridoxal-phosphate attachment FT site" FT CDS complement(174107..175615) FT /transl_table=11 FT /gene="glpD" FT /gene_synonym="STY4277" FT /product="aerobic glycerol-3-phosphate dehydrogenase" FT /EC_number="1.1.99.5" FT /note="Similar to Escherichia coli aerobic FT glycerol-3-phosphate dehydrogenase GlpD SW:GLPD_ECOLI FT (P13035) (501 aa) fasta scores: E(): 0, 90.6% id in 502 aa, FT and to Pseudomonas tolaasii glycerol-3-phosphate FT dehydrogenase GlpD SW:GLPD_PSETO (O83004) (513 aa) fasta FT scores: E(): 0, 59.9% id in 491 aa" FT /db_xref="GOA:Q8Z230" FT /db_xref="InterPro:IPR000447" FT /db_xref="UniProtKB/TrEMBL:Q8Z230" FT /protein_id="CAD08095.1" FT /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSAS FT SKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIG FT LFMYDHLGKRTSLPGSTGVRFGADSVLKPEIVRGFEYSDCWVDDARLVLANAQMVVRKG FT GEVLTRTRATAARRENGLWIVEAEDIDTGKKYVWQARGLVNATGPWVKQFFDEGMHLPS FT PYGIRLIKGSHIVVPRVHNQKQAYILQNEDKRIVFVIPWMEEFSIIGTTDVEYKGDPKA FT VKIEESEINYLLKVYNAHFQKQLGRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHD FT ENGKAPLLSVFGGKLTTYRKLAEHAMEKLASYYPGIGPAWTKTCVLPGGDIDGSREDYA FT AKLRRRYPFLTESLARHYSRTYGSNTEWILGEATSLLDLGEDFGHEFYEAELKYLVDHE FT WVRRTEDAIWRRTKEGMWLTAEQQSRITQWLAAYVEKHQLSLAS" FT misc_feature complement(174140..175615) FT /note="Pfam match to entry PF01224 FAD_Gly3P_dh, FT FAD-dependent glycerol-3-phosphate dehydrogenase, score FT 886.10, E-value 1.1e-262" FT misc_feature complement(174530..174562) FT /note="PS00978 FAD-dependent glycerol-3-phosphate FT dehydrogenase signature 2" FT misc_feature complement(175538..175591) FT /note="PS00977 FAD-dependent glycerol-3-phosphate FT dehydrogenase signature 1" FT CDS 175814..176140 FT /transl_table=11 FT /gene="glpE" FT /gene_synonym="STY4278" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli protein of unknown FT function, GlpE SW:GLPE_ECOLI (P09390) (108 aa) fasta FT scores: E(): 0, 81.5% id in 108 aa, and to Vibrio cholerae FT glpe protein vc0100 TR:Q9KVP1 (EMBL:AE004101) (106 aa) FT fasta scores: E(): 1.4e-21, 57.1% id in 98 aa" FT /note="Orthologue of E. coli glpE (GLPE_ECOLI); Fasta hit FT to GLPE_ECOLI (108 aa), 82% identity in 108 aa overlap" FT /db_xref="GOA:P64252" FT /db_xref="HSSP:1GMX" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/Swiss-Prot:P64252" FT /protein_id="CAD08096.1" FT /translation="MEQFECITVEEAYQKLHQGAAVLVDIRDPQSYAMGHAPQAFHLTN FT DTLGAFMREHGFDTAVMVMCYHGNSSKGAAQYLLQQGYDAVYSIDGGFEAWHRRFPADV FT ANGA" FT misc_feature 175835..176110 FT /note="Pfam match to entry PF00581 Rhodanese, FT Rhodanese-like domain, score 78.10, E-value 1.8e-19" FT CDS 176216..177046 FT /transl_table=11 FT /gene="glpG" FT /gene_synonym="STY4279" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli protein of unknown FT function, GlpG SW:GLPG_ECOLI (P09391) (276 aa) fasta FT scores: E(): 0, 88.4% id in 275 aa, and to Haemophilus FT influenzae GlpG protein homolog HI0618 SW:GLPG_HAEIN FT (P44783) (192 aa) fasta scores: E(): 3.6e-24, 41.2% id in FT 177 aa. Predicted hydrophobic membrane spanning domains, FT integral membrane protein" FT /db_xref="GOA:Q8Z229" FT /db_xref="InterPro:IPR002610" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z229" FT /protein_id="CAD08097.1" FT /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDIWLADESQA FT ERVRVELARFIENPGDPRYLAASWQSGQTNSGLRYRRFPFLATLRERAGPVTWIVMLAC FT VVVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGG FT AVEKRLGSGKLIVITVISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSG FT IYLQRGLIIFALLWIVAGWFDWFGMSMANGAHIAGLIVGLAMAFVDTLNARKRT" FT misc_feature 176600..177034 FT /note="Pfam match to entry PF01694 Rhomboid, Rhomboid FT family, score 172.70, E-value 5.9e-48" FT CDS 177139..177897 FT /transl_table=11 FT /gene="glpR" FT /gene_synonym="STY4280" FT /product="glycerol-3-phosphate regulon repressor" FT /note="Similar to Escherichia coli glycerol-3-phosphate FT regulon repressor GlpR SW:GLPR_ECOLI (P09392) (252 aa) FT fasta scores: E(): 0, 92.9% id in 252 aa, and to FT Haemophilus influenzae glycerol-3-phosphate regulon FT repressor GlpR SW:GLPR_HAEIN (P44784) (255 aa) fasta FT scores: E(): 0, 60.7% id in 252 aa. Contains FT helix-turn-helix motif, residues 20 to 41, score 1617 FT (+4.69 SD)." FT /db_xref="GOA:Q8Z228" FT /db_xref="InterPro:IPR018356" FT /db_xref="UniProtKB/TrEMBL:Q8Z228" FT /protein_id="CAD08098.1" FT /translation="MKQTQRHDAIIELVKKQGYVSTEELVEHFSVSPQTIRRDLNDLAE FT QNMILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAAQIPNGSTLFIDIGTTPE FT AVAHTLLGHSNLRIVTNNLNVANTLMAKEDFRIILAGGELRSRDGGIIGEATQDFIAQF FT RLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSI FT SMVDAVYTDTLPPPGVMQVIADHHIQLELC" FT misc_feature 177154..177258 FT /note="PS00894 Bacterial regulatory proteins, deoR family FT signature" FT misc_feature 177154..177831 FT /note="Pfam match to entry PF00455 deoR, Bacterial FT regulatory proteins, deoR family, score 428.80, E-value FT 5.1e-125" FT CDS complement(177971..180676) FT /transl_table=11 FT /gene="STY4281" FT /gene_synonym="malT" FT /product="MalT regulatory protein" FT /note="Similar to Escherichia coli positive regulator of FT the maltose regulon, MalT SW:MALT_ECOLI (P06993) (901 aa) FT fasta scores: E(): 0, 90.9% id in 901 aa, and to Klebsiella FT pneumoniae AcoK TR:Q48411 (EMBL:U10553) (921 aa) fasta FT scores: E(): 0, 26.0% id in 917 aa" FT /db_xref="GOA:Q8Z227" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z227" FT /protein_id="CAD08099.1" FT /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLLLVTSPAGYGK FT TTLVSQWAAGKNELGWYSLDEGDNQQERFASYLIAAIQQATGGHCSTSEAMAQKRQYAS FT LTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSRNLP FT QLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGWATAL FT QLIALSARQNHTSAHHSARRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAILRSMN FT DALIVRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFSYHPLFGSFLRQRCQWELAAEL FT PEIHRAAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKA FT LPWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNALRAQV FT AINDGNPEEAERLAKLALDELPLAWFYSRIVATSVHGEVLHCKGNLSQSLSLMQQTEQM FT ARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKEQHLEQLPMHEFLVRIR FT AQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRL FT EKLLGNGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNI FT ARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQSGRKNDAQRVLLD FT ALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRILRYINQHHRHKFAH FT FDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHI FT RNLYQKLGVAHRQDAVQHAQQLLKMMGYGV" FT misc_feature complement(177983..178180) FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 94.10, E-value FT 2.8e-24" FT misc_feature complement(178046..178129) FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature" FT CDS 181270..183663 FT /transl_table=11 FT /gene="STY4282" FT /gene_synonym="malP" FT /product="maltodextrin phosphorylase" FT /EC_number="2.4.1.1" FT /note="Similar to Escherichia coli maltodextrin FT phosphorylase SW:PHSM_ECOLI (P00490) (796 aa) fasta scores: FT E(): 0, 89.7% id in 796 aa, and to Escherichia coli FT glycogen phosphorylase GlgP SW:PHSG_ECOLI (P13031) (815 aa) FT fasta scores: E(): 0, 45.8% id in 806 aa" FT /db_xref="GOA:Q8Z226" FT /db_xref="HSSP:1L5W" FT /db_xref="InterPro:IPR011833" FT /db_xref="UniProtKB/TrEMBL:Q8Z226" FT /protein_id="CAD08100.1" FT /translation="MSQPTFNKDQFQAALTRQWQRFGLLSASDMTPRQWWQAVSGALAE FT LLSAQPVAQPTKGQRHVNYISMEFLIGRLTGNNLLNLGWYQDVSDVLKAHDINLTDLLE FT EEVDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVEGKQMEAPDDWH FT RGSYPWFRHNEALDVQVGIGGKVTKEGRWKPGFVITGQSWDLPVLGYRNGVAQPLRLWQ FT ATHAHPFDLTKFNDGAFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSV FT ADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLLDEHQMSWDDAWAITSKT FT FAYTNHTLMPEALECWDERLIKALLPRHMQIIKQINDRFKALVDNTWPGDKQVWAKLAV FT VHDRQVRMANMCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWI FT KQCNPQLAALLDKTLKKEWANDLDQLINLEKYADDATFRQQYRDIKRANKERLVKFIQA FT RTGIEISSHAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAA FT PGYYLAKNIIFAINKVAEAINNDPAVGDKLKVVFLPDYCVSAAEMLIPAADISEQISTA FT GKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEEVKALKAKGYDP FT VKWRKKDKVLDAVLKELESGQYSDGDKHAFDQMLHSLGKQGGDPYLVMADFAAYVEAQK FT QVDALYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR" FT misc_feature 181543..183660 FT /note="Pfam match to entry PF00343 phosphorylase, FT Carbohydrate phosphorylases, score 1724.60, E-value 0" FT misc_feature 183181..183219 FT /note="PS00102 Phosphorylase pyridoxal-phosphate attachment FT site" FT CDS 183673..185754 FT /transl_table=11 FT /gene="malQ" FT /gene_synonym="STY4283" FT /product="4-alpha-glucanotransferase" FT /EC_number="2.4.1.25" FT /note="Similar to Escherichia coli FT 4-alpha-glucanotransferase MalQ SW:MALQ_ECOLI (P15977) (694 FT aa) fasta scores: E(): 0, 84.9% id in 694 aa, and to FT Haemophilus influenzae 4-alpha-glucanotransferase MalQ FT SW:MALQ_HAEIN (P45176) (699 aa) fasta scores: E(): 0, 41.1% FT id in 635 aa" FT /db_xref="GOA:Q8Z225" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q8Z225" FT /protein_id="CAD08101.1" FT /translation="MENKRLDSAALAAGISPSYINAHGKPQSIGAETKRRLLAAMHGTT FT TGPQAVVPNVKVYTAGKKMALPVEGRGEFAWLLTTEEGEHYKGRVTGGKKLNLPATLPE FT GYHTLTLTQDEQRTHCRIIVAPPRCYEPQALLEGKKLWGACVQLYTLRSEKNWGIGDFG FT DLKSMLVDVATRGGAFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFRL FT SEEAQAWWQMPATQQKLRQARDAQWVDYATVTALKITALRMAWTRFAARDDAQMAEFRH FT FIAREGESLYWQAAFDALHAYQVKEDGQRWGWPAWPEAYQSVESPAVKQFCEAHREEVE FT FYLWLQWLAWRQFAACWDTCQSFKLPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGA FT PPDILGPLGQNWGLPPMDPHIIVARAYEPFIDLLRANMQNCGALRIDHVMSLLRLWWIP FT YDETADQGAYVHYPVDDLLSILALESQRHRCMVIGEDLGTVPVEIVGKLRDSGVYSYKV FT LWFENDLEKNFRAPGAYPQQSMAVASTHDLPTLRGYWECGDLTLGKALGLYPDEVILRG FT LYEDRERAKQGLLDALHKYGCLPKRAGHKALLMSMTPTLNRGLQRYIADSNSGLLGLQP FT EDWLDMADPVNVPGTSDQYKNWRRKLSASLEAMFADEGVNKLIKDLDKRRKAAAKKKK" FT CDS complement(185873..187189) FT /transl_table=11 FT /gene="gntT" FT /gene_synonym="STY4284" FT /product="high-affinity gluconate transporter" FT /note="Similar to Escherichia coli high-affinity gluconate FT transporter GntT SW:GNTT_ECOLI (P39835) (437 aa) fasta FT scores: E(): 0, 96.3% id in 438 aa, and to Escherichia coli FT GntII-system L-idonate transporter SW:IDNT_ECOLI (P39344) FT (439 aa) fasta scores: E(): 0, 61.2% id in 438 aa. FT Predicted hydrophobic membrane spanning domains, integral FT membrane protein." FT /db_xref="GOA:Q8Z224" FT /db_xref="InterPro:IPR003474" FT /db_xref="UniProtKB/TrEMBL:Q8Z224" FT /protein_id="CAD08102.1" FT /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDK FT VIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVVLT FT GFTVGFALFYEVGFVLMLPLVFTIAAAANIPLLYVGVPMAAALSVTHGFLPPHPGPTAI FT ATIFHADMGKTLLFGTILAIPTVILAGPVYARFLKGIDKPIPEGLYSAKTFTEEEMPGF FT GVSVWTSLVPVILMAMRAVAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGLNR FT GRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNVSPLLMA FT WSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFW FT LFKEYFNLTIGETIKSWSMLETIISVCGLIGCLLLGMVV" FT CDS complement(187566..188141) FT /transl_table=11 FT /gene="STY4285" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli 21.0 kDa protein in FT bioH-gntT intergenic region. protein yhgi SW:YHGI_ECOLI FT (P46847) (191 aa) fasta scores: E(): 0, 97.9% id in 191 aa, FT and to Haemophilus influenzae hypothetical 21.9 kDa protein FT in locus involved in transformation HI0433 SW:YHGI_HAEIN FT (P31774) (198 aa) fasta scores: E(): 0, 74.3% id in 191 aa" FT /db_xref="GOA:Q8Z223" FT /db_xref="InterPro:IPR001075" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z223" FT /protein_id="CAD08103.1" FT /translation="MIRISDAAQAHFAKLLANQKEGTQIRVFVINPGTPNAECGVSYCP FT PDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVADD FT APLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGI FT EKQLLNEFPELKGVRDLTEHQRGEHSYY" FT misc_feature complement(187602..187811) FT /note="Pfam match to entry PF01106 NifU-like, NifU-like FT domain, score 20.90, E-value 1.2e-05" FT misc_feature complement(187821..188141) FT /note="Pfam match to entry PF01521 HesB-like, HesB-like FT domain, score 141.50, E-value 1.5e-38" FT CDS complement(188200..188883) FT /transl_table=11 FT /gene="STY4286" FT /product="putative competence protein" FT /note="Similar to Haemophilus influenzae competence protein FT F, involved in DNA transformation, ComF SW:COMF_HAEIN FT (P31773) (229 aa) fasta scores: E(): 6.9e-31, 41.3% id in FT 223 aa, and to Escherichia coli hypothetical 25.7 kDa FT protein in bioH-gntT intergenic region YhgH SW:YHGH_ECOLI FT (P46846) (227 aa) fasta scores: E(): 0, 85.0% id in 227 aa" FT /db_xref="GOA:Q8Z222" FT /db_xref="InterPro:IPR000836" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z222" FT /protein_id="CAD08104.1" FT /translation="MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPAG FT HPSLPCGRCLQKPPPWQRLVSVSDYTPPLSLLVHQLKFTRRSEIAAALARLLLQEVLMA FT RRSTGLPLPDRIVSVPLWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRATATQ FT HHLSARLRKRNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWC FT LCRTL" FT CDS 188921..189691 FT /transl_table=11 FT /gene="STY4287" FT /gene_synonym="bioH" FT /product="putative biotin biosynthesis protein" FT /note="Possible hydrolase. Similar to Escherichia coli BioH FT protein SW:BIOH_ECOLI (P13001) (256 aa) fasta scores: E(): FT 0, 80.6% id in 253 aa, and to Neisseria meningitidis FT putative hydrolase NMA2216 TR:CAB85427(312 aa) fasta FT scores: E(): 1.8e-18, 32.3% id in 235 aa" FT /db_xref="GOA:Q8Z221" FT /db_xref="HSSP:1M33" FT /db_xref="InterPro:IPR010076" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z221" FT /protein_id="CAD08105.1" FT /translation="MNDIWWQTYGEGNCHLVLLHGWGLNAEVWHCIREELGSHFTLHLV FT DLPGYGRSSGFGAMTLEEMTAQVAKNAPDQAIWLGWSLGGLVASQMALTHPERVQALVT FT VASSPCFSAREGWPGIKPEILGGFQQQLSDDFQRTVERFLALQTLGTETARQDARTLKS FT VVLAQPMPDVEVLNGGLEILKTVDLREALKNVNMPFLRLYGYLDGLVPRKIAPLLDTLW FT PHSTSQIMAKAAHAPFISHPAAFCQALMTLKSSL" FT misc_feature 189038..189676 FT /note="Pfam match to entry PF00561 abhydrolase, alpha/beta FT hydrolase fold, score 112.80, E-value 6.6e-30" FT CDS complement(189727..190653) FT /transl_table=11 FT /gene="STY4288" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 34.9 kDa FT protein in glpC-ais intergenic region SW:YFAD_ECOLI FT (P37014) (299 aa) fasta scores: E(): 0, 63.7% id in 303 aa, FT and to Escherichia coli hypothetical 34.2 kDa protein in FT folX-hisP intergenic region SW:YFCI_ECOLI (P77768) (296 aa) FT fasta scores: E(): 0, 66.9% id in 308 aa" FT /db_xref="InterPro:IPR010106" FT /db_xref="UniProtKB/TrEMBL:Q8Z220" FT /protein_id="CAD08106.1" FT /translation="MATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNTL FT RLESGSFIEEDLRPHYSDILWSLETSEGDGYIYVVIEHQSTPDAHMAFRLMRYAMAAMQ FT RHLEAGHKTLPLVVPMLFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDITVVP FT DDEIMRHRRVALLELIQKHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMHTGDA FT ARFNTFIRQVAMRIPQHKEKIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAALRIARS FT MLNDGFDRDTVLRVTGLAPADLASESH" FT CDS complement(190888..191124) FT /transl_table=11 FT /gene="STY4289" FT /gene_synonym="yhgG" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 8.7 kDa FT protein in feoB-bioH intergenic region YhgG SW:YHGG_ECOLI FT (P46845) (78 aa) fasta scores: E(): 3.7e-27, 89.7% id in 78 FT aa" FT /db_xref="GOA:Q8XG51" FT /db_xref="InterPro:IPR015102" FT /db_xref="UniProtKB/Swiss-Prot:Q8XG51" FT /protein_id="CAD08107.1" FT /translation="MASLIQVRDLLALRGRMEATQISHTLHAPQPMIDAMLNQLEIMGK FT AVRIPEEPDGCLSGSCKSCPEGKACLREWWALR" FT CDS complement(191137..193455) FT /transl_table=11 FT /gene="feoB" FT /gene_synonym="STY4290" FT /product="ferrous iron transport protein B" FT /note="Similar to Escherichia coli ferrous iron transport FT protein B FeoB SW:FEOB_ECOLI (P33650) (773 aa) fasta FT scores: E(): 0, 92.1% id in 773 aa, and to Shewanella FT putrefaciens ferrous iron transporter FeoB TR:Q9Z478 FT (EMBL:AF083240) (692 aa) fasta scores: E(): 0, 41.9% id in FT 683 aa. Predicted hydrophobic membrane spanning domains, FT integral membrane protein" FT /db_xref="GOA:Q83ST5" FT /db_xref="InterPro:IPR005225" FT /db_xref="UniProtKB/Swiss-Prot:Q83ST5" FT /protein_id="CAD08108.1" FT /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQF FT ATTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYL FT TLQLLELGIPCIVALNMLDIAEKQQVRIDVDALSTRLGCPVVPLVSTRGRGIEALKLAI FT DRHNANDNVELVHYAQPLLREAGFLADAMAQEMPLQQRRWLGLQMLEGDICSRAYAGEA FT AQNLDTSLARLKDEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTRAVDKIILNR FT FLGLPIFLFVMYLMFLLAINIGGALQPLFDAGSVAIFIHGIQWIGYTLHFPDWLTIFLA FT QGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIV FT GFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSL FT YVLGIVMAVLTGLMLKHTIMRGEASPFVMELPVYHVPHIKSLIIQTWQRLKGFVLRAGK FT VIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHEDNWQATVGLFT FT GAMAKEVVVGTLNTLYTAENIQDEAFNPADFHLGDELLGAVDDTWQSLKDTFSLSVLAN FT PIEASKGDGEMATGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMGAIARESSRGWMS FT FSILWGLNIAYSLATLFYQVTSFSQHPTYSLICILAVIVFNVVVLSLLRRARSRVDIEL FT LATRKSVTSCCSGTAGNCH" FT misc_feature complement(192277..192300) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(193405..193428) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(193474..193701) FT /transl_table=11 FT /gene="feoA" FT /gene_synonym="STY4291" FT /product="putative ferrous iron transport protein" FT /note="Similar to Escherichia coli ferrous iron transport FT protein A FeoA SW:FEOA_ECOLI (P33649) (75 aa) fasta scores: FT E(): 1.8e-29, 96.0% id in 75 aa, and to Deinococcus FT radiodurans ferrous iron transport protein A DR1220 FT TR:Q9RV10 (EMBL:AE001970) (76 aa) fasta scores: E(): FT 0.00022, 40.6% id in 69 aa. Function not known." FT /db_xref="GOA:Q8XF15" FT /db_xref="InterPro:IPR007167" FT /db_xref="UniProtKB/TrEMBL:Q8XF15" FT /protein_id="CAD08109.1" FT /translation="MQFTPDTAWKITGFAREISPAYRQKLLSLGMLPGSSFNVVRVAPL FT GDPIHIETRRVSLVLRKKDLALIEVEAVSC" FT CDS complement(194138..196468) FT /transl_table=11 FT /gene="STY4292" FT /product="putative transcription accessory protein" FT /note="Possible RNA binding protein. Similar to Bordetella FT pertussis transcription accessory tex protein SW:TEX_BORPE FT (Q45388) (791 aa) fasta scores: E(): 0, 60.7% id in 768 aa, FT and to Escherichia coli 85.1 kDa protein in greB-feoA FT intergenic region YhgF SW:YHGF_ECOLI (P46837) (773 aa) FT fasta scores: E(): 0, 94.1% id in 776 aa" FT /db_xref="GOA:Q8Z218" FT /db_xref="HSSP:1SRO" FT /db_xref="InterPro:IPR018974" FT /db_xref="UniProtKB/TrEMBL:Q8Z218" FT /protein_id="CAD08110.1" FT /translation="MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEIT FT GGLDDTQLRNLETRLGYLRELEDRRQAILKSISEQGKLTDELAGAINATLSKTELEDLY FT LPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVKAAKYIDGDKGVADTKAALDGAR FT YILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHR FT ALAMFRGRNEGILQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSW FT TWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGV FT KVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYL FT DVQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV FT KIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMA FT QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVV FT ERILAATQQALKDLMGNSNELRHLKAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKT FT AQFADGVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSTKFVDDPHTV FT VKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETAARRGGGADRAQGNRPASKAAKPRG FT RDAQPAGNSAMMDALAAAMGKKR" FT misc_feature complement(194309..194530) FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 100.40, E-value 3.5e-26" FT CDS complement(196567..197040) FT /transl_table=11 FT /gene="greB" FT /gene_synonym="STY4293" FT /product="transcription elongation factor GreB" FT /note="Similar to Escherichia coli transcription elongation FT factor GreB SW:GREB_ECOLI (P30128) (158 aa) fasta scores: FT E(): 0, 94.9% id in 157 aa, and to Haemophilus influenzae FT transcription elongation factor GreB SW:GREB_HAEIN (P43882) FT (158 aa) fasta scores: E(): 0, 61.5% id in 156 aa" FT /db_xref="GOA:Q8Z217" FT /db_xref="HSSP:1GRJ" FT /db_xref="InterPro:IPR018151" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z217" FT /protein_id="CAD08111.1" FT /translation="MKTPLITREGYETLKQELNYLWREERPEVTKKVTWAASLGDRSEN FT ADYQYNKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIENDDGDTLKFR FT IVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPVGEANWYVNAIEYVK" FT misc_feature complement(196573..197040) FT /note="Pfam match to entry PF01272 GreA_GreB, Prokaryotic FT transcription elongation factor, GreA/GreB, score 335.20, FT E-value 7.3e-97" FT misc_feature complement(196636..196686) FT /note="PS00830 Prokaryotic transcription elongation factors FT signature 2" FT misc_feature complement(196897..197022) FT /note="PS00829 Prokaryotic transcription elongation factors FT signature 1" FT CDS 197266..197985 FT /transl_table=11 FT /gene="ompR" FT /gene_synonym="STY4294" FT /product="two-component response regulator OmpR" FT /note="Identical to the Escherichia coli transcriptional FT regulatory protein OmpR SW:OMPR_ECOLI (P03025) (239 aa) FT fasta scores: E(): 0, 100.0% id in 239 aa, and simillar to FT Salmonella typhimurium, and Salmonella typhi FT transcriptional regulatory protein OmpR SW:OMPR_SALTY FT (P08981) (239 aa) fasta scores: E(): 0, 99.6% id in 239 aa" FT /db_xref="GOA:P0AA20" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:P0AA20" FT /protein_id="CAD08112.1" FT /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLT FT RESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIP FT KPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTS FT GEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYI FT QTVWGLGYVFVPDGSKA" FT misc_feature 197278..197613 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 146.20, E-value 5.8e-40" FT misc_feature 197734..197952 FT /note="Pfam match to entry PF00486 trans_reg_C, FT Transcriptional regulatory protein, C terminal, score FT 126.80, E-value 1.2e-36" FT CDS 197982..199334 FT /transl_table=11 FT /gene="envZ" FT /gene_synonym="STY4295" FT /product="two-component sensor kinase EnvZ" FT /note="Salmonella typhi osmolarity sensor protein EnvZ FT SW:ENVZ_SALTI (P41406) (450 aa) fasta scores: E(): 0, FT 100.0% id in 450 aa, similar to Escherichia coli osmolarity FT sensor protein EnvZ SW:ENVZ_ECOLI (P02933) (450 aa) fasta FT scores: E(): 0, 95.5% id in 449 aa" FT /note="Orthologue of E. coli envZ (ENVZ_ECOLI); Fasta hit FT to ENVZ_ECOLI (450 aa), 96% identity in 446 aa overlap" FT /db_xref="GOA:P41406" FT /db_xref="HSSP:1JOY" FT /db_xref="InterPro:IPR005467" FT /db_xref="UniProtKB/Swiss-Prot:P41406" FT /protein_id="CAD08113.1" FT /translation="MRRMRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQQ FT FNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYTNEAAEEAGLRWAQH FT YEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRY FT TLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNH FT MAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMGEEDGYLAESINKDIEECNAII FT EQFIDYLRTGQEMPMEMADLNSVLGEVIAAESGYEREINTALQAGSIQVKMHPLSIKRA FT VANMVVNAARYGNCWIKVSSGTESHRAWFQVEDDGPGIKPEQRKHLFQPFVRGDSARST FT SGTGLGLAIVQRIIDNHNGMLEIGTSERGGLSIRAWLPVPVARVQGTTKEA" FT misc_feature 198459..198668 FT /note="Pfam match to entry PF00672 DUF5, HAMP domain, score FT 50.10, E-value 4.8e-11" FT misc_feature 198708..199292 FT /note="Pfam match to entry PF00512 signal, Histidine FT kinase, score 206.50, E-value 4.1e-58" FT CDS complement(199409..201028) FT /transl_table=11 FT /gene="STY4296" FT /gene_synonym="pckA" FT /product="phosphoenolpyruvate carboxykinase" FT /EC_number="4.1.1.49" FT /note="Similar to Escherichia coli phosphoenolpyruvate FT carboxykinase [ATP] PckA SW:PPCK_ECOLI (P22259) (540 aa) FT fasta scores: E(): 0, 93.7% id in 540 aa, and to FT Haemophilus influenzae phosphoenolpyruvate carboxykinase FT [ATP] PckA SW:PPCK_HAEIN (P43923) (538 aa) fasta scores: FT E(): 0, 77.3% id in 534 aa" FT /db_xref="GOA:Q8Z216" FT /db_xref="HSSP:1AYL" FT /db_xref="InterPro:IPR015994" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z216" FT /protein_id="CAD08114.1" FT /translation="MRVNNLTPQDLKAYGINDVQDIVYNPSYDTLYQEELNPGLEGYER FT GVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTLWWSDKGKGKNDNKPLSQETWQHL FT KGLVTHQLSGKRLFIVDAFCGANADTRLSVRFITEVAWQAHFVKNMFIRPTDEELVGFK FT PDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLL FT PLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFE FT GGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVREDGTVDFDDGSKTENTRVSYPIYHI FT DNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTE FT PTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAII FT DAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFI FT ENFEKYTDTPAGEALVSAGPKL" FT misc_feature complement(199553..200977) FT /note="Pfam match to entry PF01293 PEPCK_ATP, FT Phosphoenolpyruvate carboxykinase, score 1245.80, E-value FT 0" FT misc_feature complement(200192..200239) FT /note="PS00532 Phosphoenolpyruvate carboxykinase (ATP) FT signature" FT misc_feature complement(200267..200290) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 201408..203117 FT /transl_table=11 FT /gene="STY4297" FT /gene_synonym="yhgE" FT /product="putative membrane protein" FT /note="similar to Escherichia coli hypothetical 64.6 kDa FT protein in mrcA-pckA intergenic region YhgE SW:YHGE_ECOLI FT (P45804) (574 aa) fasta scores: E(): 0, 55.9% id in 571 aa. FT Predicted hydrophobic membrane spanning domains, integral FT membrane protein." FT /db_xref="UniProtKB/TrEMBL:Q8Z215" FT /protein_id="CAD08115.1" FT /translation="MESVALSRTTRWGMLLTGLLQGVLCYLLMAWLVPQNSDWLFYGMP FT ATIALSSMLLLTVVSFKQRALWGWLGLIFVVVLAMSGWLKWQVEAVEKWRLAELLWLYG FT LRLVLMAMLVLPWMQYQLHSQTGSARYPQFYLRLWHNVLTLFIVLVANGLFWLVLLLWS FT ALFRLVGIRFFSTLFFETEAFIYVTIGLITALAVILARTQSRLVAAVQKLLTLIATGLL FT PVVSLLALLFIVTLPFTGLEAISARVSATGLLSTLTLMLLLLVAIVNEPQKRVLPYPRV FT LRGMISASLCVAPIYMLLAGWALWVRIQQYGWTPDRLYGALTASVLLVWSFGYLIGLLR FT RGRDPDEWQGKVILSVSLLTLVILLLLASPVLDVWRISVNSHMARYHSGKITADQISLY FT MLDHSGKPGQEALKSLRDDEAFTQNRKRNRELMTFLQRNKVPPTADDLARVVMIAPGSQ FT KPDAAFWAFVKEQSYSDASCLEPDACVLVSQDLNGDGQPEQVLYNFIVAESQVYGLKEG FT KWTQKAFARLPDGFSKTQLLHAIAGHRLDSAPKAWRDIIVDGQRLDVDYYNE" FT CDS complement(203228..204106) FT /transl_table=11 FT /gene="STY4298" FT /product="heat shock protein" FT /note="Similar to Escherichia coli 33 kDa heat shock FT protein, redox regulated molecular chaperonin, HslO FT SW:HSLO_ECOLI (P45803) (292 aa) fasta scores: E(): 0, 92.5% FT id in 292 aa, and to Vibrio cholerae hypothetical protein FT VC2736 TR:Q9KNK2 (EMBL:AE004339) (296 aa) fasta scores: FT E(): 0, 57.1% id in 289 aa" FT /db_xref="GOA:Q8Z214" FT /db_xref="HSSP:1HW7" FT /db_xref="InterPro:IPR016153" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z214" FT /protein_id="CAD08116.1" FT /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILDNHNYPQSVKTVL FT AELLVATSLLTATLKFAGDITVQLQGDGPLSLAVINGNNQQQMRGVARVQGDIPDNADL FT KTLVGNGYLVITITPEEGERYQGVVGLEGDTLAACLEDYFLRSEQLPTRLFIRTGDVDG FT KPAAGGMLLQVMPAQNAQAEDFDHLAMLTETIKSEELLTLPANDVLWRLYHEEEVTLYD FT PQEVEFKCTCSRERCAGALKTLPDEEVDSILAEEGEIDMHCDYCGNHYLFNAMDIAEIR FT NNASPADPQVH" FT misc_feature complement(203267..204094) FT /note="Pfam match to entry PF01430 HSP33, Hsp33 protein, FT score 598.30, E-value 4.7e-176" FT CDS complement(204131..204532) FT /transl_table=11 FT /gene="STY4299" FT /gene_synonym="hslR" FT /product="heat shock protein" FT /note="Similar to Escherichia coli, 50S ribosomal subunit FT associated heat shock protein HSP15, HslR SW:HSLR_ECOLI FT (P45802) (133 aa) fasta scores: E(): 0, 95.5% id in 133 aa, FT and to Haemophilus influenzae heat shock protein 15 HslR FT SW:HSLR_HAEIN (P44754) (131 aa) fasta scores: E(): 2.1e-32, FT 66.4% id in 131 aa" FT /db_xref="GOA:Q8Z213" FT /db_xref="HSSP:1DM9" FT /db_xref="InterPro:IPR002942" FT /db_xref="UniProtKB/TrEMBL:Q8Z213" FT /protein_id="CAD08117.1" FT /translation="MKEKSSVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKP FT SKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAVALYEETAESVEKREKMAQARKL FT NALTMPHPARRPDKKERRDLLRFKHGDSE" FT misc_feature complement(204368..204508) FT /note="Pfam match to entry PF01479 S4, S4 domain, score FT 59.10, E-value 9.2e-14" FT CDS complement(204543..205253) FT /transl_table=11 FT /gene="yrfG" FT /gene_synonym="STY4300" FT /product="putative hydrolase" FT /note="Similar to Escherichia coli hypothetical 25.4 kDa FT protein in mrca-pcka intergenic region yrfG SW:YRFG_ECOLI FT (P45801) (222 aa) fasta scores: E(): 0, 85.5% id in 221 aa, FT and to Pseudomonas sp 2-haloalkanoic acid dehalogenase FT SW:HAD_PSESP (Q53464) (232 aa) fasta scores: E(): 0.0029, FT 27.8% id in 144 aa" FT /db_xref="GOA:Q8Z212" FT /db_xref="InterPro:IPR005833" FT /db_xref="UniProtKB/TrEMBL:Q8Z212" FT /protein_id="CAD08118.1" FT /translation="MLPCRANCVTLEFPMHIDIDWQNVDTVLLDMDGTLLDLAFDNYFW FT QKLVPETYGAQQGISPQDAQEYIRQQYHAVQHTLNWYCLDYWSERLGLDICAMTTAQGP FT RAVLRDDTVPFLNALKASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFGYPK FT EDQRLWRAVTEETGISAEKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGLAEKHYTRH FT PSLNDYRRLIPSLK" FT misc_feature complement(204627..205184) FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 108.10, E-value 1.7e-28" FT CDS complement(205276..207408) FT /transl_table=11 FT /gene="yrfF" FT /gene_synonym="STY4301" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 79.5 kDa FT protein in mrcA-pckA intergenic region YrfF SW:YRFF_ECOLI FT (P45800) (711 aa) fasta scores: E(): 0, 83.9% id in 710 aa, FT and to Proteus mirabilis UmoB TR:O86988 (EMBL:U66822) (702 FT aa) fasta scores: E(): 0, 39.2% id in 701 aa. This CDS FT contains a signal sequence and several transmembrane FT regions" FT /db_xref="GOA:P58721" FT /db_xref="InterPro:IPR010771" FT /db_xref="UniProtKB/Swiss-Prot:P58721" FT /protein_id="CAD08119.1" FT /translation="MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWFSAFQDAQTRKL FT LPEERSAVENYLDNLSQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITTDD FT PNKWRYYLDSVEVHLPPFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESRGYA FT LQNTASTQASIRGEESEQIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFFCLIT FT PDVFVPWMIGGAILLLAAGLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQEQINNI FT SLGIIDLIYPAHWQPYITQDLGQQTDIDIYLDRHVARQGRFLSLHDEVKNFPLQHWLRS FT TVIAIGSLLVLFMLLFWIPLDMPIKFTLSWMKGAQTIEATTVKQLEKAGVRVGDTLHLS FT GKGMCNIHSGATWSGQSNSPFMPFDCSQIIWNDAPALPLPESDLVNKAMALSQAVNRQL FT HPKPEDDSRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCAAEDECVRLKNALVNLGNS FT KDWNALVKRANAGKLDGVNVLLRPVSAESLENLVTTSTAPFISRETARAAQSLNSPAPG FT GFLIASDEGSELVDQAWPSTPLYDYPAQEQWSAFQRLAQTLMQTPFSAEGIVTSVYTDA FT NGTQHISLHRIPDKSGWWRYLGTTLLMLAMIVSAVYNGIQAFRRYQRHRTRMADIQEYY FT ESCLNPRLTVSPENLI" FT CDS 207698..208294 FT /transl_table=11 FT /gene="yrfE" FT /gene_synonym="STY4302" FT /product="putative NUDIX hydrolase" FT /note="Similar to Escherichia coli hypothetical 21.2 kDa FT protein in mrca-pcka intergenic region yrfE SW:YRFE_ECOLI FT (P45799) (186 aa) fasta scores: E(): 0, 92.5% id in 186 aa" FT /db_xref="GOA:Q8XF95" FT /db_xref="HSSP:1VHZ" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/TrEMBL:Q8XF95" FT /protein_id="CAD08120.1" FT /translation="MTTDYTAKILTMSKSLQKPTILKVETVAQSRLFNVESVDLEFSNG FT VRRVYERMRPSTREAVMIVPIVDEHLILIREYAVGTESYELGFSKGLIDPGETVFEAAN FT RELKEEVGFGAHNLTFLKKLSMAPSYFSSKMNIVVAEDLYPESLEGDEPEPLPQVRWPL FT AHLMDLLEDPDFNEARNVSALFLVREWLKAQGRIA" FT misc_feature 207905..208036 FT /note="Pfam match to entry PF00293 mutT, Bacterial mutT FT protein, score 57.20, E-value 5.7e-15" FT misc_feature 207968..208027 FT /note="PS00893 mutT domain signature" FT CDS complement(208390..210966) FT /transl_table=11 FT /gene="mrcA" FT /gene_synonym="STY4303" FT /product="penicillin-binding protein 1A" FT /note="Similar to Escherichia coli penicillin-binding FT protein 1A mrca or ponA SW:PBPA_ECOLI (P02918) (850 aa) FT fasta scores: E(): 0, 92.5% id in 850 aa, and to FT Pseudomonas aeruginosa penicillin-binding protein 1A ponA FT TR:Q07806 (EMBL:U73780) (822 aa) fasta scores: E(): 0, FT 42.1% id in 860 aa" FT /db_xref="GOA:Q8Z211" FT /db_xref="HSSP:1K25" FT /db_xref="InterPro:IPR011816" FT /db_xref="UniProtKB/TrEMBL:Q8Z211" FT /protein_id="CAD08121.1" FT /translation="MTLNGKSPVKFVKYLLILAVCCILLGAGSIYGLYRYIEPQLPDVA FT TLKDVRLQIPMQVYSADGELIAQYGEKRRIPVTLDQIPPEMINAFIATEDSRFYEHHGI FT DPVGIFRAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLLN FT KNEILELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLSLSEMAVIAGLPKAPSTFNPLYS FT MDRAVARRNVVLSRMLSEGYITQAQYDQARSEPIDANYHAPEIAFSAPYLSEMVRQEMY FT NRYGESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYSGPANVLWKVGETAWD FT SKKITDTLKALPTYGPLLPAVVTSANPQEATAALADGTSVSLHMEGMRWARPYRSDTQQ FT GPTPRKVTDVVQTGQQIWVRQVDNDWWLAQVPEVNSALVSLNPQTGAVLALVGGFDFNQ FT SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWRPKNSPP FT QYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSASF FT TPMQVARGYAVMANGGFLIDPYFISKIENDQGGVIFEAKPKIACTECDIPVIYGNTQKS FT DVLENTNVEEVAVSQEQQNSAVPMPELEQANQALVAQNGTQEYAPHVINTPLAFLIKSA FT LNTNIFGEPGWMGTGWRAARDLKRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDD FT HRRDLGRTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPGIVTVNI FT DRSTGQLASGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGETHELF" FT misc_feature complement(208606..209736) FT /note="Pfam match to entry PF00905 Transpeptidase, FT Penicillin binding protein transpeptidase domain, score FT 15.40, E-value 1.1e-07" FT misc_feature complement(210295..210801) FT /note="Pfam match to entry PF00912 Transglycosyl, FT Transglycosylase, score 390.80, E-value 1.3e-113" FT CDS 211063..211842 FT /transl_table=11 FT /gene="yrfD" FT /gene_synonym="STY4304" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 30.0 kDa FT protein in hofq-mrca intergenic region SW:YRFD_ECOLI FT (P45753) (268 aa) fasta scores: E(): 0, 66.1% id in 257 aa" FT /db_xref="UniProtKB/TrEMBL:Q8Z210" FT /protein_id="CAD08122.1" FT /translation="MAFKTWQIGLHIQQHEALAIAVIRGASGWSLQRWWRLPLMNASTA FT EGTIPDPQSLAHVLRPWSRELPLRHRIYLSFPANRTLQRAFPHPPMRLREREQVAWLSQ FT TMARELDMDPDLLRFDFQDDALSPAFNVTAVQSKEISELLTLAQTLNVRIAAVTPDACA FT LQRLLPFIPSGRQCLVWRDESQWLWATRYAWGRKSAREAMTLHDLAATLSVVPEHISLC FT AEGEFDPWRAVTVRQPPVPPDGYRFAIALGLAMGEIR" FT CDS 211842..212381 FT /transl_table=11 FT /gene="yrfC" FT /gene_synonym="STY4305" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical protein FT yrfC SW:YRFC_ECOLI (P45752) (179 aa) fasta scores: E(): FT 7.9e-29, 49.2% id in 179 aa. Contains a predicted FT transmembrane helix" FT /db_xref="InterPro:IPR007813" FT /db_xref="UniProtKB/TrEMBL:Q8Z209" FT /protein_id="CAD08123.1" FT /translation="MAHSVNLLPWRRQHYVARLRLWCVVWGASLLLIASLATIARLVFW FT QEGRINELLLTAENGRTTALAANIPQLQQRQRQQQARLQRQAQRELTQAWQSILTDLAN FT LLPEQAWLTSLNYQQETLELEGLARTFDALLTLETSLRHYVSFPLNRTGATRQDAQGRW FT QFHYQLTRSAARERAL" FT CDS 212365..212838 FT /transl_table=11 FT /gene="yrfB" FT /gene_synonym="STY4306" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical protein FT yrfB SW:YRFB_ECOLI (P45751) (146 aa) fasta scores: E(): FT 1.5e-15, 47.1% id in 157 aa. Contains a predicted FT transmembrane helix" FT /db_xref="UniProtKB/TrEMBL:Q8Z208" FT /protein_id="CAD08124.1" FT /translation="MNALFDIWYGMSRRGRVFCWCAGVLCLTLTVALSVGYPGWKTLDT FT QHARLSQQREAARQQWRHLRRLSVAAEPLFGRTIENPRPFSPLDFQAPPLRLLHWQPSA FT QGGEMALKTSWDAVPSLFVRLAESEMSVSRFSLRREGAELLITLQLERLANEG" FT CDS 212828..213229 FT /transl_table=11 FT /gene="yrfA" FT /gene_synonym="STY4307" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yrfA (YRFA_ECOLI); Fasta hit FT to YRFA_ECOLI (146 aa), 62% identity in 133 aa overlap" FT /db_xref="InterPro:IPR019684" FT /db_xref="UniProtKB/TrEMBL:Q8Z207" FT /protein_id="CAD08125.1" FT /translation="MKVSRGVLLCFCLLTLTGMRDPFRPPEDRCRIAELSQWRYQGAVR FT KGERWTGILKDSQQKWRRVEEGQTLENGWTIVRLTAEALTLTTGKNCAPPQWRWLRQGA FT DNEAMDSHNTDSLDARRAGGKSGESDAGG" FT CDS 213144..214382 FT /transl_table=11 FT /gene="hofQ" FT /gene_synonym="STY4308" FT /product="type II secretion system protein" FT /note="Similar to Escherichia coli protein transport FT protein hofq precursor hofq or hopQ SW:HOFQ_ECOLI (P34749) FT (412 aa) fasta scores: E(): 0, 86.9% id in 412 aa" FT /db_xref="GOA:Q8Z206" FT /db_xref="InterPro:IPR013355" FT /db_xref="UniProtKB/TrEMBL:Q8Z206" FT /protein_id="CAD08126.1" FT /translation="MKRWIAIILIVLMPAAQAGKAAKVTLVVDDVPVVQVLQALAEQER FT QNLVVSPDVSGTLSLHLTDVPWKQALQTVVNSAGLVLRQEGNILHVHSQAWQKEHSARQ FT DAERLRLQANLPLENRSISLQYADAGELAKAGEKLLSAKGTIMVDKRTNRLLLRDNRAA FT LAELEKWVSQMDLPVAQVELAAHIVTINEKSLRELGVKWTLADATQAGAVGDVTTLSSD FT LSVAAATSRVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI FT PYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA FT IDKQEIETQVEVKSGETLALGGIFSRKNKSGSDSVPLLGDIPWLGQLFRHDGKEDERRE FT LVVFITPRLVATE" FT misc_feature 213231..214373 FT /note="Pfam match to entry PF00263 Bac_GSPproteins, FT Bacterial type II secretion system protein, score 426.10, FT E-value 3.1e-124" FT misc_feature 214206..214307 FT /note="PS00875 Bacterial type II secretion system protein D FT signature" FT CDS 214847..215368 FT /transl_table=11 FT /gene="aroK" FT /gene_synonym="STY4309" FT /product="shikimate kinase I" FT /EC_number="2.7.1.71" FT /note="Similar to Escherichia coli shikimate kinase i aroK FT SW:AROK_ECOLI (P24167) (172 aa) fasta scores: E(): 0, 97.1% FT id in 172 aa, and to Haemophilus influenzae shikimate FT kinase arok or hi0207 SW:AROK_HAEIN (P43880) (180 aa) fasta FT scores: E(): 0, 72.7% id in 172 aa" FT /db_xref="GOA:P63602" FT /db_xref="HSSP:1SHK" FT /db_xref="InterPro:IPR000623" FT /db_xref="UniProtKB/Swiss-Prot:P63602" FT /protein_id="CAD08127.1" FT /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGA FT DVGWVFDVEGEDGFRNREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLE FT TTIEKQLARTQRDKKRPLLQVEAPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVA FT NQIIHMLESN" FT misc_feature 214859..215356 FT /note="Pfam match to entry PF01202 SKI, Shikimate kinase, FT score 306.50, E-value 3.1e-88" FT misc_feature 215024..215101 FT /note="PS01128 Shikimate kinase signature" FT CDS 215425..216513 FT /transl_table=11 FT /gene="aroB" FT /gene_synonym="STY4310" FT /product="3-dehydroquinate synthase" FT /EC_number="4.6.1.3" FT /note="Similar to Salmonella typhimurium 3-dehydroquinate FT synthase SW:AROB_SALTY (P77980) (362 aa) fasta scores: E(): FT 0, 99.4% id in 362 aa, and to Escherichia coli FT 3-dehydroquinate synthase aroB SW:AROB_ECOLI (P07639) (362 FT aa) fasta scores: E(): 0, 92.5% id in 362 aa" FT /db_xref="GOA:Q8Z205" FT /db_xref="HSSP:1DQS" FT /db_xref="InterPro:IPR016037" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z205" FT /protein_id="CAD08128.1" FT /translation="MERITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNETL FT APLYLDKVRGVLERAGVNVDSVILPDGEQYKSLTVLDTVFTALLKKPHGRDTTLVALGG FT GVIGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASV FT VVDLDCLKTLPARELASGLAEVIKYGIILDADFFTWLEGNLDALLRLDGPAMAYCIRRC FT CELKAEVVAADEREAGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGIVMAARASER FT LGQFSSADTQRIIALLERAGLPVNGPCEMSAQDYLPHMLRDKKVLAGELRLVLPLTIGK FT SEVRGGVSHEVVLSAIADCQQA" FT misc_feature 215470..216495 FT /note="Pfam match to entry PF01761 DHQ_synthase, FT 3-dehydroquinate synthase, score 696.70, E-value 1.1e-205" FT CDS 216611..217888 FT /transl_table=11 FT /gene="damX" FT /gene_synonym="STY4311" FT /product="DamX protein" FT /note="Similar to Escherichia coli DamX protein damX FT SW:DAMX_ECOLI (P11557) (427 aa) fasta scores: E(): 0, 76.2% FT id in 437 aa" FT /db_xref="InterPro:IPR007730" FT /db_xref="UniProtKB/TrEMBL:Q8Z204" FT /protein_id="CAD08129.1" FT /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERDNEPQINFDDVDLDADD FT RRPTRTRKARSEEPEVEEEYESDEDDTVDEERVERRPRKRKKAAHKPASRQYMMMGVGV FT LVLLLLIIGIGSALKAPSTSSSEPSASGEKSIDLSGNAADQANATQPAPGATSAEQTAG FT NTSQDISLPPISSTPMQGQSPVVADGQQRVEVQGDLNNALTQNPEQMNNVAVNSTLPTE FT PATVAPVRNGSTTRQAAVSEPAERHTTRPERKQAVIELKKPQTTAKTTTAEPKKPVAPV FT KRTEPAAPAATPKATTTTAAPQATASAAPVQTAKPAQASTTPVAGGGKSAGNVGALKSA FT PSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVTGMYASKEDAKRA FT VSTLPADVQAKNPWAKPLHQVQADLK" FT CDS 218069..218905 FT /transl_table=11 FT /gene="dam" FT /gene_synonym="STY4312" FT /product="DNA adenine methylase" FT /EC_number="2.1.1.72" FT /note="Similar to Salmonella typhimurium DNA adenine FT methylase SW:DMA_SALTY (P55893) (278 aa) fasta scores: E(): FT 0, 99.6% id in 278 aa, and to Escherichia coli DNA adenine FT methylase daM SW:DMA_ECOLI (P00475) (278 aa) fasta scores: FT E(): 0, 92.1% id in 278 aa" FT /db_xref="GOA:P0A292" FT /db_xref="HSSP:2DPM" FT /db_xref="InterPro:IPR002052" FT /db_xref="UniProtKB/Swiss-Prot:P0A292" FT /protein_id="CAD08130.1" FT /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNT FT DFSRYILADINSDLISLYNIVKLRTDEYVQASRELFMPETNQAEVYYQLREEFNTCQDP FT FRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKRPYFPEAELYHFAEKAQNAFFYCE FT SYADSMARADKSSVVYCDPPYAPLSATANFTAYHTNSFSLTQQAHLAEIAENLVSNRIP FT VLISNHDTALTREWYQLAKLHVVKVRRSISSNGGTRKKVDELLALYQPGVATPARK" FT misc_feature 218096..218821 FT /note="Pfam match to entry PF02086 MethyltransfD12, D12 FT class N6 adenine-specific DNA methyltransferase, score FT 341.80, E-value 7.4e-99" FT misc_feature 218600..218620 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature" FT CDS 218923..219600 FT /transl_table=11 FT /gene="rpe" FT /gene_synonym="STY4313" FT /product="ribulose-phosphate 3-epimerase" FT /EC_number="5.1.3.1" FT /note="Similar to Escherichia coli ribulose-phosphate FT 3-epimerase rpe or doD SW:RPE_ECOLI (P32661) (225 aa) fasta FT scores: E(): 0, 97.3% id in 225 aa, and to Serratia FT marcescens ribulose-phosphate 3-epimerase rpe or doD FT SW:RPE_SERMA (P45455) (210 aa) fasta scores: E(): 0, 87.1% FT id in 210 aa" FT /db_xref="GOA:Q8Z203" FT /db_xref="HSSP:1RPX" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q8Z203" FT /protein_id="CAD08131.1" FT /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPN FT LTIGPMVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQ FT LIKEHGCKAGLVFNPATSLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRR FT RIDASGYDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDKPDYKKVIDEMRSELAKV FT SHE" FT misc_feature 218935..219540 FT /note="Pfam match to entry PF00834 Ribul_P_3_epim, FT Ribulose-phosphate 3 epimerase family, score 469.70, FT E-value 2.3e-137" FT misc_feature 219019..219063 FT /note="PS01085 Ribulose-phosphate 3-epimerase family FT signature 1" FT misc_feature 219328..219396 FT /note="PS01086 Ribulose-phosphate 3-epimerase family FT signature 2" FT CDS 219593..220351 FT /transl_table=11 FT /gene="gph" FT /gene_synonym="STY4314" FT /product="phosphoglycolate phosphatase" FT /EC_number="3.1.3.18" FT /note="Similar to Escherichia coli phosphoglycolate FT phosphatase gph SW:GPH_ECOLI (P32662) (252 aa) fasta FT scores: E(): 0, 90.5% id in 252 aa, and to Pseudomonas FT aeruginosa phosphoglycolate phosphatase gph TR:Q9S586 FT (EMBL:AB030825) (272 aa) fasta scores: E(): 8.9e-23, 45.7% FT id in 230 aa" FT /db_xref="GOA:Q8Z202" FT /db_xref="InterPro:IPR006346" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z202" FT /protein_id="CAD08132.1" FT /translation="MNKLQNIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEER FT VITWIGNGADVLMERALTWASQERATLRKTMGKPPVDEDIPAEEQVRILRKLFDKYYGE FT VAEEGTFLFPHVADTLGALHASGLSLGLVTNKPTPFVAPLLESLDIAKYFSVVIGGDDV FT QNKKPHPEPLLLVASRLGMTPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEVIAL FT SEPDVIYDSFNDLLPALGLPHSDNQEIKND" FT misc_feature 219611..220231 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 184.50, E-value 1.7e-51" FT CDS 220344..221348 FT /transl_table=11 FT /gene="trpS" FT /gene_synonym="STY4315" FT /product="tryptophanyl-tRNA synthetase" FT /EC_number="6.1.1.2" FT /note="Similar to Escherichia coli tryptophanyl-tRNA FT synthetase trpS SW:SYW_ECOLI (P00954) (334 aa) fasta FT scores: E(): 0, 96.7% id in 333 aa, and to Haemophilus FT influenzae tryptophanyl-tRNA synthetase trps or hi0637 FT SW:SYW_HAEIN (P43835) (334 aa) fasta scores: E(): 0, 77.7% FT id in 332 aa" FT /db_xref="GOA:P0A2P3" FT /db_xref="InterPro:IPR002306" FT /db_xref="UniProtKB/Swiss-Prot:P0A2P3" FT /protein_id="CAD08133.1" FT /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQH FT AITVRQDAQQLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGEL FT SRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQR FT FNGLYGDIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKR FT AVTDSDEPPVVRYDVKEKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGEVAEAV FT SGMLSELQERYHRFRNDEAFLQKVMKDGAEKASARAAETLKAVYEAIGFVAKP" FT misc_feature 220359..221027 FT /note="Pfam match to entry PF00579 tRNA-synt_1b, tRNA FT synthetases class I (W and Y), score 362.10, E-value FT 5.8e-105" FT misc_feature 220377..220406 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature" FT CDS complement(221492..221662) FT /transl_table=11 FT /gene="yhfL" FT /gene_synonym="STY4316" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 5.8 kDa FT protein in cysg-trps intergenic region yhfL SW:YHFL_ECOLI FT (P45538) (55 aa) fasta scores: E(): 4.6e-18, 81.5% id in 54 FT aa" FT /db_xref="UniProtKB/TrEMBL:Q8XGL5" FT /protein_id="CAD08134.1" FT /translation="MFKFVKIAVVAGVLATLTACTGHIENKKNNCSYDYLLHPAISISK FT IIGGCGPAADQ" FT CDS complement(221856..227464) FT /pseudo FT /transl_table=11 FT /gene="bigA" FT /gene_synonym="STY4318" FT /product="putative surface-exposed virulence protein FT (pseudogene)" FT /note="Similar to Salmonella typhi bigA TR:Q9X686 FT (EMBL:AF133185) (1136 aa) fasta scores: E(): 0, 100.0% id FT in 1136 aa, and to Salmonella typhimurium putative FT surface-exposed virulence protein BigA bigA TR:Q9XCQ3 FT (EMBL:AF133696) (1963 aa) fasta scores: E(): 0, 62.1% id in FT 1260 aa. Contains a frameshift at around codon 1137" FT CDS complement(227791..229164) FT /transl_table=11 FT /gene="cysG" FT /gene_synonym="STY4319" FT /product="siroheme synthase" FT /EC_number="2.1.1.107" FT /EC_number="4.99.1.-" FT /note="Similar to Salmonella typhimurium siroheme synthase FT [includes: uroporphyrin-III C-methyltransferase, precorrin FT 2-oxidase and ferrochelatase] cysG SW:CYSG_SALTY (P25924) FT (457 aa) fasta scores: E(): 0, 98.7% id in 457 aa, and to FT Escherichia coli siroheme synthase cysG SW:CYSG_ECOLI FT (P11098) (457 aa) fasta scores: E(): 0, 90.2% id in 457 aa" FT /db_xref="GOA:Q8Z201" FT /db_xref="HSSP:1PJT" FT /db_xref="InterPro:IPR003043" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z201" FT /protein_id="CAD08136.1" FT /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF FT IPQFTVWVNEGMLTLVEGPFDETLLDSCWLAIAATDDDTVNQRVSEAAESRRIFCNVVD FT APKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQHLGQVARYAGQLRA FT RVKKQFATMGERRRFWEKFFVNDRLAQSLANADEKAVNATTEHLFSEPLDHRGEVVLVG FT AGPGDAGLLTLKGLQQIQQADIVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHCVPQEE FT INQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYS FT GIPLTHRDYAQSVRLVTGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQEKLIAFGM FT EANMPVALVENGTSVKQRVVHGVLTQLGELAQQVESPALIIVGRVVALRDKLNWFSNH" FT misc_feature complement(227884..228516) FT /note="Pfam match to entry PF00590 TP_methylase, FT Tetrapyrrole (Corrin/Porphyrin) Methylases., score 328.80, FT E-value 6.1e-95" FT misc_feature complement(228157..228189) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT misc_feature complement(228178..228279) FT /note="PS00840 Uroporphyrin-III C-methyltransferase FT signature 2" FT misc_feature complement(228460..228504) FT /note="PS00839 Uroporphyrin-III C-methyltransferase FT signature 1" FT CDS complement(229176..229985) FT /transl_table=11 FT /gene="nirC" FT /gene_synonym="STY4320" FT /product="putative nitrite transporter" FT /note="Similar to Salmonella typhimurium potential nitrite FT transporter nirC SW:NIRC_SALTY (P25926) (269 aa) fasta FT scores: E(): 0, 94.1% id in 269 aa, Escherichia coli FT potential nitrite transporter nirC SW:NIRC_ECOLI (P11097) FT (268 aa) fasta scores: E(): 0, 92.1% id in 267 aa and FT Chlamydomonas reinhardtii chloroplast nitrite transporter FT nar1 TR:Q9LE25 (Q9LE25) (355 aa) fasta scores: E(): FT 1.2e-18, 34.7% id in 248 aa" FT /db_xref="GOA:Q8Z200" FT /db_xref="InterPro:IPR000292" FT /db_xref="UniProtKB/TrEMBL:Q8Z200" FT /protein_id="CAD08137.1" FT /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILI FT FTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTLGVKAGTISHGQMWAI FT LPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPATVLFFKGALCNWL FT VCLAIWMAIRTEGTAKFLAIWWCLLAFIASGYEHSVANMTLFALSWFGHHSDAYTLSGI FT GHNLLWVTLGNTLSGVVFMGLGYWYATPKSERPVPQKTNQIKATANH" FT misc_feature complement(229224..229985) FT /note="Pfam match to entry PF01226 Form_Nir_trans, FT Formate/nitrite transporter, score 471.80, E-value FT 5.7e-138" FT misc_feature complement(229485..229517) FT /note="PS01006 Formate and nitrite transporters signature FT 2" FT misc_feature complement(229740..229769) FT /note="PS01005 Formate and nitrite transporters signature FT 1" FT CDS complement(230167..230493) FT /transl_table=11 FT /gene="nirD" FT /gene_synonym="STY4321" FT /product="nitrite reductase (NAD(P)H) small subunit" FT /EC_number="1.6.6.4" FT /note="Similar to Escherichia coli nitrite reductase [NAD FT nirD SW:NIRD_ECOLI (P23675) (108 aa) fasta scores: E(): 0, FT 93.5% id in 108 aa, and to Salmonella typhimurium nitrite FT reductase [NAD nirD SW:NIRD_SALTY (P40789) (67 aa) fasta FT scores: E(): 2.2e-25, 98.5% id in 67 aa" FT /db_xref="GOA:P0A230" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/Swiss-Prot:P0A230" FT /protein_id="CAD08138.1" FT /translation="MSQWQNICKIDDILPGTGVCALSGGEQVAIFRPYHSDQVFAISNI FT DPFFEASVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYDARVKDGVV FT QLRG" FT CDS complement(230490..233033) FT /transl_table=11 FT /gene="nirB" FT /gene_synonym="STY4322" FT /product="nitrite reductase large subunit" FT /EC_number="1.6.6.4" FT /note="Similar to Escherichia coli nitrite reductase [NAD FT nirB SW:NIRB_ECOLI (P08201) (847 aa) fasta scores: E(): 0, FT 95.0% id in 847 aa" FT /db_xref="GOA:Q8Z1Z9" FT /db_xref="InterPro:IPR017121" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Z9" FT /protein_id="CAD08139.1" FT /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDASLFDITVFCEEPRKAYD FT RVHLSSYFSHHTAEELSLVREGFYEKHGVKVLVGERAITINRQEKVIHSSAGRTVYYDK FT LIMATGSYPWIPPIKGSETQDCFVYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGA FT LKNLGVETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTQEIVQQGNEARK FT TMRFADGSELEVDFIVFSTGIRPRDKLATQCGLAVAQRGGIVINDTCQTSDPDIYAIGE FT CASWNNRVYGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRT FT PGARSYVYLDESKEVYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDS FT LILPSHASSGKPAIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTG FT CGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEELLTKHGK FT GYGCEVCKPTVGSLLASCWNEYILKPQHTPLQDTNDNFLANIQKDGTYSVIPRSAGGEI FT TPEGLVAVGRIAREFNLYTKITGSQRIGLFGAQKDDLPEIWRQLIEAGFETGHAYAKAL FT RMAKTCVGSTWCRYGVGDSVGFGVELENRYKGIRTPHKMKFGVSGCTRECAEAQGKDVG FT IIATEKGWNLYVCGNGGMKPRHADLLAADLDRDTLIKYLDRFMMFYIRTADKLTRTAPW FT LDNLEGGIEYLKSVIIDDKLGLNEHLEEEMARLRAAVVCEWTETVNTPAAQVRFKHFIN FT SDKRDPNVQVVPEREQHRPATPYERIPVTLVEENA" FT misc_feature complement(230934..231128) FT /note="Pfam match to entry PF01077 NIR_SIR, Nitrite and FT sulphite reductase 4Fe-4S domain, score 99.80, E-value FT 5.3e-26" FT misc_feature complement(230949..230999) FT /note="PS00365 Nitrite and sulfite reductases FT iron-sulfur/siroheme-binding site" FT misc_feature complement(232188..233018) FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 260.30, E-value FT 4e-76" FT CDS complement(233350..234531) FT /transl_table=11 FT /gene="yhfC" FT /gene_synonym="STY4323" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 43.2 kDa FT protein in ppia-nirb intergenic region yhfC SW:YHFC_ECOLI FT (P21229) (393 aa) fasta scores: E(): 0, 91.3% id in 393 aa" FT /db_xref="GOA:Q8Z1Z8" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z1Z8" FT /protein_id="CAD08140.1" FT /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFQLPVSSM FT SNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFILMVLAVAGLMFSHSLALFSAAMF FT VLGLVSGITMSIGTFLITQLYEGRQRGSRLLFTDSFFSMAGMIFPMVAAFLLARSIEWY FT WVYACIGLVYLAIFILTFGCEFPALGKHAQHSQAPVVKEKWGIGVLFLAVAALCYILGQ FT LGFISWVPEYAKGLGMSLNDAGALVSDFWMSYMFGMWAFSFILRFFDLQRILTVLAGMA FT AILMYLFITGTQAHMPWFILTLGFFSSAIYTSIITLGSQQTKVASPKLVNFILTCGTIG FT TMLTFVVTGPIVAHSGPQAALLTANGLYAVVFVMCFALGFVSRHRQHSSPAAH" FT misc_feature complement(234142..234219) FT /note="PS00217 Sugar transport proteins signature 2" FT CDS 234808..235380 FT /transl_table=11 FT /gene="ppiA" FT /gene_synonym="rotA" FT /gene_synonym="STY4324" FT /product="peptidyl-prolyl cis-trans isomerase" FT /EC_number="5.2.1.8" FT /note="Similar to Escherichia coli peptidyl-prolyl FT cis-trans isomerase a precursor ppia or rota or roT FT SW:CYPH_ECOLI (P20752) (190 aa) fasta scores: E(): 0, 95.3% FT id in 190 aa" FT /db_xref="GOA:Q8Z1Z7" FT /db_xref="HSSP:1CLH" FT /db_xref="InterPro:IPR002130" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Z7" FT /protein_id="CAD08141.1" FT /translation="MLKSTLAAVAAVFALSALSPVALAAKGDPHVLLTTSAGNIELELN FT SQKAPVSVKNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFNEQMQQKKPNPPIKNEADNG FT LRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKIS FT QVPTHDVGPYQNVPTKPVVILSAKVLP" FT misc_feature 234889..235377 FT /note="Pfam match to entry PF00160 pro_isomerase, FT Cyclophilin type peptidyl-prolyl cis-trans isomerase, score FT 266.20, E-value 1.5e-76" FT misc_feature 235000..235053 FT /note="PS00170 Cyclophilin-type peptidyl-prolyl cis-trans FT isomerase signature" FT CDS 235489..235656 FT /transl_table=11 FT /gene="yhfG" FT /gene_synonym="STY4325" FT /product="conserved hypothetical protein" FT /note="Similar to Salmonella typhimurium hypothetical 6.8 FT kDa protein in fic-ppia intergenic region yhfG FT SW:YHFG_SALTY (P37771) (55 aa) fasta scores: E(): 1.8e-21, FT 96.4% id in 55 aa, and to Escherichia coli hypothetical 6.6 FT kDa protein in fic-ppia intergenic region yhfG FT SW:YHFG_ECOLI (P37770) (55 aa) fasta scores: E(): 1.3e-16, FT 80.0% id in 55 aa" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Z6" FT /protein_id="CAD08142.1" FT /translation="MKKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALAR FT LDELRRHYER" FT CDS 235646..236248 FT /transl_table=11 FT /gene="fic" FT /gene_synonym="STY4326" FT /product="cell filamentation protein Fic" FT /note="Similar to Salmonella typhimurium cell filamentation FT protein FiC fiC SW:FIC_SALTY (P20751) (200 aa) fasta FT scores: E(): 0, 98.0% id in 200 aa, and to Escherichia coli FT cell filamentation protein Fic SW:FIC_ECOLI (P20605) (200 FT aa) fasta scores: E(): 0, 87.0% id in 200 aa" FT /db_xref="InterPro:IPR003812" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Z5" FT /protein_id="CAD08143.1" FT /translation="MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAA FT TIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNALMQ FT DLEEEGYLVGLTHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYALSWQ FT GIAVETWNQANQSGAMGDLSALRAIFQKAISEARETE" FT CDS 236280..236843 FT /transl_table=11 FT /gene="pabA" FT /gene_synonym="STY4327" FT /product="para-aminobenzoate synthase, glutamine FT amidotransferase component II" FT /EC_number="4.1.3.-" FT /note="Similar to Salmonella typhimurium para-aminobenzoate FT synthase glutamine amidotransferase component ii pabA FT SW:PABA_SALTY (P06193) (187 aa) fasta scores: E(): 0, 99.5% FT id in 187 aa, and to Escherichia coli para-aminobenzoate FT synthase glutamine amidotransferase component ii pabA FT SW:PABA_ECOLI (P00903) (187 aa) fasta scores: E(): 0, 85.0% FT id in 187 aa" FT /db_xref="GOA:Q8Z1Z4" FT /db_xref="HSSP:1I1Q" FT /db_xref="InterPro:IPR019775" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Z4" FT /protein_id="CAD08144.1" FT /translation="MILLIDNYDSFTWNLYQYFCELGAEVQVRRNDALTLAHIDALNPQ FT KIVISPGPCTPNDAGISLAVIRHYAGRIPMLGVCLGHQAMAQAFGASVVRAAKVMHGKT FT SPVTHNGQGVFRGLPSPLTVTRYHSLIVDPATLPECFEITAWSETQEIMGIRHREWDLE FT GVQFHPESILSEQGHALLENFLRR" FT misc_feature 236286..236840 FT /note="Pfam match to entry PF00117 GATase, Glutamine FT amidotransferase class-I, score 302.30, E-value 5.7e-87" FT misc_feature 236499..236534 FT /note="PS00442 Glutamine amidotransferases class-I active FT site" FT CDS 236929..238146 FT /transl_table=11 FT /gene="argD" FT /gene_synonym="dtU" FT /gene_synonym="STY4328" FT /product="acetylornithine aminotransferase" FT /EC_number="2.6.1.11" FT /note="Similar to Escherichia coli acetylornithine FT aminotransferase argd or dtU SW:ARGD_ECOLI (P18335) (405 FT aa) fasta scores: E(): 0, 91.3% id in 403 aa, and to FT Pseudomonas aeruginosa acetylornithine aminotransferase FT aruC TR:O30508 (EMBL:AF011922) (406 aa) fasta scores: E(): FT 0, 65.3% id in 404 aa" FT /note="Fasta hit to ARGM_ECOLI (406 aa), 61% identity in FT 398 aa overlap" FT /note="Fasta hit to BIOA_ECOLI (429 aa), 31% identity in FT 415 aa overlap" FT /note="Fasta hit to GOAG_ECOLI (421 aa), 33% identity in FT 403 aa overlap" FT /note="Fasta hit to GABT_ECOLI (426 aa), 35% identity in FT 427 aa overlap" FT /note="Fasta hit to OAT_ECOLI (429 aa), 34% identity in 414 FT aa overlap" FT /note="Orthologue of E. coli argD (ARGD_ECOLI); Fasta hit FT to ARGD_ECOLI (405 aa), 91% identity in 403 aa overlap" FT /db_xref="GOA:Q8Z1Z3" FT /db_xref="HSSP:1QJ3" FT /db_xref="InterPro:IPR017652" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z1Z3" FT /protein_id="CAD08145.1" FT /translation="MATEQTAITRATFDEVILPVYAPADFIPVKGKGSRVWDQQGKEYI FT DFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALCLGRKLIDATFAERVLF FT MNSGTEANETAFKLARHYACVRHSPFKTKIIAFQNAFHGRSLFTVSVGGQPKYSDGFGP FT KPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDKHQAL FT LVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHVGSH FT GSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGL FT LIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADINEGMQRFAQA FT VGKVVA" FT misc_feature 237025..238083 FT /note="Pfam match to entry PF00202 aminotran_3, FT Aminotransferases class-III pyridoxal-phosphate, score FT 561.70, E-value 8.1e-195" FT misc_feature 237595..237708 FT /note="PS00600 Aminotransferases class-III FT pyridoxal-phosphate attachment site" FT CDS complement(238189..240276) FT /pseudo FT /transl_table=11 FT /gene="yhfK" FT /gene_synonym="STY4329" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Similar to Escherichia coli hypothetical 79.5 kDa FT protein in crp-argd intergenic region yhfK SW:YHFK_ECOLI FT (P45537) (696 aa) fasta scores: E(): 0, 88.2% id in 153 aa. FT Contains a stop codon at aa 154. The sequence has been FT checked and is believed to be correct" FT CDS complement(240325..240957) FT /transl_table=11 FT /gene="crp" FT /gene_synonym="cap" FT /gene_synonym="STY4331" FT /product="cyclic AMP receptor protein,catabolite gene FT activator" FT /note="Similar to Salmonella typhimurium, and Klebsiella FT aerogenes catabolite gene activator crp or cap SW:CRP_SALTY FT (P06170) (210 aa) fasta scores: E(): 0, 99.5% id in 210 aa, FT and to Escherichia coli, and Shigella flexneri catabolite FT gene activator crp or cap or csm SW:CRP_ECOLI (P03020) (210 FT aa) fasta scores: E(): 0, 99.0% id in 210 aa" FT /db_xref="GOA:Q8Z1Z2" FT /db_xref="HSSP:1I5Z" FT /db_xref="InterPro:IPR018335" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Z2" FT /protein_id="CAD08147.1" FT /translation="MVLGKPQTDPALEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVK FT GSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFR FT QLIQVNPDILMRLSSQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDG FT MQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR" FT misc_feature complement(240367..240462) FT /note="Pfam match to entry PF00325 crp, Bacterial FT regulatory proteins, crp family, score 59.30, E-value FT 3.7e-18" FT misc_feature complement(240385..240456) FT /note="PS00042 Bacterial regulatory proteins, crp family FT signature" FT misc_feature complement(240622..240906) FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 122.70, E-value 7e-33" FT misc_feature complement(240691..240747) FT /note="PS00889 Cyclic nucleotide-binding domain signature FT 2" FT misc_feature complement(240820..240870) FT /note="PS00888 Cyclic nucleotide-binding domain signature FT 1" FT CDS 241265..241669 FT /transl_table=11 FT /gene="yhfA" FT /gene_synonym="STY4332" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 14.5 kDa FT protein in prkb-crp intergenic region yhfA SW:YHFA_ECOLI FT (P24246) (134 aa) fasta scores: E(): 0, 94.0% id in 134 aa, FT and to Erwinia chrysanthemi DNA for crp gene TR:O07095 FT (EMBL:X89443) (135 aa) fasta scores: E(): 0, 85.7% id in FT 133 aa" FT /db_xref="GOA:Q8Z1Z1" FT /db_xref="HSSP:1ML8" FT /db_xref="InterPro:IPR003718" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Z1" FT /protein_id="CAD08148.1" FT /translation="MQARVKWVEGLTFLGESSSGHQILMDGNSGDKAPSPMEMVLMAAG FT GCSAIDVVSILQKGRQNVTNCEVKLTSERREDAPRLFTHINLHFIVTGGDLKEAAVARA FT VDLSAEKYCSVALMLEKAVNITHSYEVIAA" FT CDS complement(241765..242634) FT /transl_table=11 FT /gene="prkB" FT /gene_synonym="STY4333" FT /product="phosphoribulokinase" FT /EC_number="2.7.1.19" FT /note="Similar to Escherichia coli probable FT phosphoribulokinase prkB SW:KPPR_ECOLI (P37307) (289 aa) FT fasta scores: E(): 0, 97.2% id in 289 aa, and to FT Alcaligenes eutrophus phosphoribulokinase, plasmid cfxP FT SW:KPPP_ALCEU (P19924) (291 aa) fasta scores: E(): 0, 57.1% FT id in 287 aa" FT /db_xref="GOA:Q8XEY0" FT /db_xref="HSSP:1A7J" FT /db_xref="InterPro:IPR006083" FT /db_xref="UniProtKB/TrEMBL:Q8XEY0" FT /protein_id="CAD08149.1" FT /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFH FT RYTRPEMDMAIRKARDAGRHISYFGPEANDFSLLEHTFIEYGQTGKGQSRKYLHTYDEA FT VPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHDVARHVDLLVGVVPIVNLEWIQ FT KLIRDTSERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFAAKGI FT PSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQR FT LMEGKKIE" FT misc_feature complement(241816..242616) FT /note="Pfam match to entry PF00485 PRK, FT Phosphoribulokinase, score 502.00, E-value 4.4e-147" FT misc_feature complement(242104..242145) FT /note="PS00567 Phosphoribulokinase signature" FT CDS complement(242686..242904) FT /transl_table=11 FT /gene="yheU" FT /gene_synonym="STY4334" FT /product="conserved hypothetical protein" FT /note="Similar to Haemophilus influenzae hypothetical FT protein HI0956 SW:YHEU_HAEIN (P44954) (56 aa) fasta scores: FT E(): 1.2e-06, 65.8% id in 38 aa" FT /note="Orthologue of E. coli yheU (YHEU_ECOLI); Fasta hit FT to YHEU_ECOLI (72 aa), 88% identity in 72 aa overlap" FT /db_xref="InterPro:IPR010648" FT /db_xref="UniProtKB/Swiss-Prot:P0A2P5" FT /protein_id="CAD08150.1" FT /translation="MIIPWQGLAPDTLDNLIESFVLREGTDYGEHERSLEQKVADVKRQ FT LQSGEAVLVWSELHETVNIMPKKQFRE" FT CDS complement(242901..243780) FT /pseudo FT /transl_table=11 FT /gene="yheT" FT /gene_synonym="STY4335" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Similar to Escherichia coli hypothetical 38.5 kDa FT protein in kifb-prkb intergenic region yheT SW:YHET_ECOLI FT (P45524) (340 aa) fasta scores: E(): 2.1e-16, 78.2% id in FT 55 aa, and to Vibrio cholerae hypothetical protein Vc2610 FT vc2610 TR:Q9KNX0 (EMBL:AE004327) (329 aa) fasta scores: FT E(): 3.5e-09, 54.7% id in 53 aa. This CDS contains a FT frameshift at around codon 66 due to a 77 bp deletion. The FT sequence has been checked and is believed to be correct" FT misc_feature complement(242928..243608) FT /note="Pfam match to entry PF00561 abhydrolase, alpha/beta FT hydrolase fold, score 77.50, E-value 2.7e-19" FT misc_feature complement(243081..243206) FT /note="PS01133 Uncharacterized protein family UPF0017 FT signature" FT CDS 244086..244397 FT /transl_table=11 FT /gene="STY4337" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 11.3 kDa FT protein in ribe-pykf intergenic region precursor. protein FT ydhr precursor SW:YDHR_ECOLI (P77225) (101 aa) fasta FT scores: E(): 1.7e-26, 65.3% id in 98 aa" FT /note="Orthologue of E. coli YDHR_ECOLI; Fasta hit to FT YDHR_ECOLI (101 aa), 65% identity in 98 aa overlap" FT /db_xref="InterPro:IPR014910" FT /db_xref="UniProtKB/TrEMBL:Q8XEU6" FT /protein_id="CAD08152.1" FT /translation="MSKTLLQIHFNFSGPFGEEMTQQLVGLAESINEEPGFIWKIWTES FT EKNQQAGGIYLFESEETAQAYIKKHTARLKNLGVDEVTFTLFGVNDALTKINHGNLCR" FT CDS 244480..244704 FT /transl_table=11 FT /gene="STY4338" FT /product="hypothetical protein" FT /note="No database matches" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Y9" FT /protein_id="CAD08153.1" FT /translation="MDEQWTTNVLFQRVQRLGGAGDVTLLHKHHEDGELAEGNVIGDRQ FT VHRPPRALEPIPVGVIVEASLGPDSAQKP" FT CDS complement(244765..246672) FT /transl_table=11 FT /gene="yheS" FT /gene_synonym="STY4339" FT /product="probable ABC transporter ATP-binding protein" FT /note="Similar to Escherichia coli hypothetical ABC FT transporter ATP-binding protein YheS yheS SW:YHES_ECOLI FT (P45535) (637 aa) fasta scores: E(): 0, 93.4% id in 632 aa, FT and to Haemophilus influenzae hypothetical ABC transporter FT ATP-binding protein Hi0658 hi0658 SW:YHES_HAEIN (P44808) FT (638 aa) fasta scores: E(): 0, 67.9% id in 638 aa, and to FT Neisseria meningitidis ABC transporter, ATP-binding protein FT nmb1226 TR:AAF41607 (EMBL:UNNKOWN ACCESSION) (640 aa) fasta FT scores: E(): 0, 53.1% id in 635 aa" FT /note="Fasta hit to YBIT_ECOLI (530 aa), 33% identity in FT 528 aa overlap" FT /note="Fasta hit to YJJK_ECOLI (554 aa), 30% identity in FT 525 aa overlap" FT /note="Fasta hit to UUP_ECOLI (635 aa), 30% identity in 634 FT aa overlap" FT /db_xref="GOA:Q8Z1Y8" FT /db_xref="HSSP:1US8" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Y8" FT /protein_id="CAD08154.1" FT /translation="MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLLA FT LLKNEISADAGSFTLPGTWQLAWVNQETPALPQPAIEYVIDGDREYRHLEAQLNDANER FT NDGHAIASIHGKLDAIDAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNLAQA FT LICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYPGTLILISHDRDFLDPIVDKIIHIEQQ FT TLFEYTGNYSAFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIK FT MLERMELIAPAHVDNPFHFSFRAPESLPNPLLKMEKVSAGYGDRIILESIKLNLVPGSR FT IGLLGRNGAGKSTLIKLLAGELEPLHGEIGLAKGIKLGYFAQHQLEFLRADESPLQHMA FT RLAPQELEQKLRDYLGGFGFQGDKVTEETQRFSGGEKARLVLALIVWQRPNLLLLDEPT FT NHLDLDMRQALTEALIDFEGALVVVSHDRHLIRSTTDDLYLVHDKKVEPFDGDLEDYQQ FT WLSDVQKQENQADDAPKENNANSAQSRKDQKRREAELRTLTQPLRKEITRLEKEMEKLN FT AQLAQAEEKLGDSSLYDPSRKAEMTECLQLQASAKSGLEECEMAWLEAQEQLEQMMQND FT " FT misc_feature complement(245164..245661) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 142.60, E-value 7.2e-39" FT misc_feature complement(245338..245382) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(245617..245640) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(246007..246594) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 164.40, E-value 1.9e-45" FT misc_feature complement(246181..246225) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(246550..246573) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 246938..247489 FT /transl_table=11 FT /gene="yheR" FT /gene_synonym="STY4340" FT /product="putative oxidoreductase" FT /note="Similar to Escherichia coli putative oxidoreductase FT yheR SW:YHER_ECOLI (P45534) (184 aa) fasta scores: E(): 0, FT 89.6% id in 182 aa, and to Yersinia pestis sequence 26 from FT patent wo0047725 TR:CAC09970 (EMBL:AX033149) (183 aa) fasta FT scores: E(): 0, 74.6% id in 181 aa, and to Vibrio cholerae FT NAD vc2607 TR:Q9KNX3 (EMBL:AE004327) (196 aa) fasta scores: FT E(): 0, 57.6% id in 170 aa" FT /db_xref="GOA:P65511" FT /db_xref="HSSP:1QR2" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/Swiss-Prot:P65511" FT /protein_id="CAD08155.1" FT /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPAIQHNNVTVHDLYARYP FT DFFIDTPYEQALLREHDVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLVGKY FT WRSVITTGEPESAYRYDALNRYPMSDVLRPFELTAAMCRMHWMPPIIVYWARRQSPQTL FT ASHAKAYGEWLANPVSAGGY" FT CDS 247489..249294 FT /transl_table=11 FT /gene="kefB" FT /gene_synonym="trkB" FT /gene_synonym="STY4341" FT /product="glutathione-regulated potassium-efflux system FT protein (K(+)/H(+)antiporter)" FT /note="Similar to Escherichia coli glutathione-regulated FT potassium-efflux system protein kefb kefb or trkB FT SW:KEFB_ECOLI (P45522) (601 aa) fasta scores: E(): 0, 93.3% FT id in 601 aa" FT /db_xref="GOA:Q8Z1Y7" FT /db_xref="InterPro:IPR003148" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z1Y7" FT /protein_id="CAD08156.1" FT /translation="MEGADLLTAGVLFLFAAVAAVPLAARLGIGAVLGYLLAGIAIGPW FT GLGFISDVDEILHFSELGVVFLMFIIGLELNPSRLWQLRRSIFGVGAAQVLLSAAVLAG FT LLMLADFLWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPA FT LALVPLLAGSADEHFDWFKVAMKVLAFAVMLIGGRYLLRPVFRFIAASGVREVFTAATL FT LLVLSAALFMDALGLSMALGTFIAGVLLAESEYRHELENAIDPFKGLLLGLFFISVGMS FT LNLGVLYTHLLWVAASVVILVVIKMLTLYLLARLYGIRSSERMQFASVLSQGGEFAFVL FT FSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKGIDKWLSRRLNGPEENDEKPWVEDD FT KPQVVVVGFGRFGQVIARLLMANKMRITVLERDIGAVNLMRKYGYKVYYGDATQVELLR FT SAGAEAAESIVITCNEPEDTMKLVALCQQHFPHLHILARARGRVEAHELLQAGVTQFSR FT ETFSSALELGRKTLVSLGMHPHQAQRAQLHFRRLDMRMLRELIPEHSDMVQISRAREAR FT RELEEIFQREMQQERRQLDGWDEFE" FT misc_feature 248692..249054 FT /note="Pfam match to entry PF02254 KTN, KTN NAD-binding FT domain, score 48.40, E-value 1.6e-10" FT CDS 249304..249504 FT /transl_table=11 FT /gene="yheV" FT /gene_synonym="STY4342" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 7.6 kDa FT protein in slyd-kefb intergenic region yheV SW:YHEV_ECOLI FT (P56622) (66 aa) fasta scores: E(): 1.7e-27, 90.9% id in 66 FT aa." FT /db_xref="InterPro:IPR012658" FT /db_xref="UniProtKB/TrEMBL:Q8XEV2" FT /protein_id="CAD08157.1" FT /translation="MAIRKRFIAGAKCPACQAQDTMAMWRENNVDIVECVKCGHQMREA FT DKDVREHVRKEEQVIGIFHPD" FT CDS 249599..250189 FT /transl_table=11 FT /gene="slyD" FT /gene_synonym="STY4343" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase" FT /EC_number="5.2.1.8" FT /note="Similar to Escherichia coli fkbp-type FT peptidyl-prolyl cis-trans isomerase SlyD slyD SW:SLYD_ECOLI FT (P30856) (196 aa) fasta scores: E(): 0, 96.4% id in 196 aa" FT /db_xref="GOA:Q8Z1Y6" FT /db_xref="HSSP:1IX5" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Y6" FT /protein_id="CAD08158.1" FT /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGL FT ETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGP FT VPVEITEVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDHG FT EDGCCSGHGHDHGHEHGGEGCCGGGGKGSCGCH" FT misc_feature 249629..249676 FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1" FT misc_feature 249707..250009 FT /note="Pfam match to entry PF00254 FKBP, FKBP-type FT peptidyl-prolyl cis-trans isomerases, score 129.40, E-value FT 1.1e-39" FT misc_feature 249719..249805 FT /note="PS00454 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 2" FT CDS complement(250376..250594) FT /transl_table=11 FT /gene="slyX" FT /gene_synonym="STY4344" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli SlyX protein slyX FT SW:SLYX_ECOLI (P30857) (72 aa) fasta scores: E(): 2.8e-25, FT 93.1% id in 72 aa, and to Haemophilus influenzae slyx FT protein homolog slyx or hi0573 SW:SLYX_HAEIN (P44759) (73 FT aa) fasta scores: E(): 4.1e-10, 49.3% id in 67 aa" FT /db_xref="InterPro:IPR007236" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z1Y5" FT /protein_id="CAD08159.1" FT /translation="MQDITMEARLAELESRLAFQEITIEELNLTVTAHEMEMAKLRNHL FT RLLTEKLKASQPSNIASQAEETPPPHY" FT CDS 250814..251632 FT /transl_table=11 FT /gene="fkpA" FT /gene_synonym="STY4345" FT /product="FKBP-type peptidyl-prolyl isomerase" FT /EC_number="5.2.1.8" FT /note="Similar to Escherichia coli fkbp-type FT peptidyl-prolyl cis-trans isomerase FkpA precursor fkpA FT SW:FKBA_ECOLI (P45523) (270 aa) fasta scores: E(): 0, 89.7% FT id in 272 aa, and to Aeromonas hydrophila fkbp-type FT peptidyl-prolyl cis-trans isomerase FkpA precursor fkpA FT SW:FKBA_AERHY (O08437) (268 aa) fasta scores: E(): 0, 44.0% FT id in 266 aa" FT /db_xref="GOA:Q8Z1Y4" FT /db_xref="HSSP:1Q6H" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Y4" FT /protein_id="CAD08160.1" FT /translation="MKSLFKATLLATTMAVAMHVPITFAADAAKPAATADSKAAFKNDD FT QKAAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQT FT FEARVKSAAQAKMEKDAADNEAKGKTFRDAFAKEKGVKTSSTGLLYKVEKEGTGEAPKD FT SDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKSGKIKLVIPPA FT LAYGKTGVPGIPANSTLVFDVELLDIKPAPKADAKPADAADAKAADAAKK" FT misc_feature 250880..251269 FT /note="Pfam match to entry PF01346 FKBP_N, Domain amino FT terminal to FKBP-type peptidyl-prolyl isomerase, score FT 204.30, E-value 1.8e-57" FT misc_feature 251279..251551 FT /note="Pfam match to entry PF00254 FKBP, FKBP-type FT peptidyl-prolyl cis-trans isomerases, score 172.30, E-value FT 2.7e-53" FT CDS 251909..252631 FT /transl_table=11 FT /gene="yheO" FT /gene_synonym="STY4346" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 26.8 kDa FT protein in rpsl-fkpa intergenic region yheO SW:YHEO_ECOLI FT (P45533) (240 aa) fasta scores: E(): 0, 97.9% id in 240 aa, FT and to Haemophilus influenzae hypothetical protein Hi0575 FT hi0575 SW:YHEO_HAEIN (P44761) (221 aa) fasta scores: E(): FT 0, 67.6% id in 219 aa" FT /note="Orthologue of E. coli YHEO_ECOLI; Fasta hit to FT YHEO_ECOLI (240 aa), 98% identity in 240 aa overlap" FT /db_xref="InterPro:IPR013559" FT /db_xref="UniProtKB/TrEMBL:Q8XFW2" FT /protein_id="CAD08161.1" FT /translation="MSRSLLTNETSELDLLDQRPFEQTDFDILKSYEAVVDGLAMLIGS FT HCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRA FT KSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMNTFIPPETPEVGSAVNFASSV FT EDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHT FT VYLYIRQFKSGDFQGQDK" FT CDS 252631..253017 FT /transl_table=11 FT /gene="yheN" FT /gene_synonym="STY4347" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 13.6 kDa FT protein in rpsl-fkpa intergenic region yheN SW:YHEN_ECOLI FT (P45532) (128 aa) fasta scores: E(): 0, 85.2% id in 128 aa, FT and to Chromatium vinosum DsrE dsrE TR:O87896 (EMBL:U84760) FT (130 aa) fasta scores: E(): 1.4e-20, 45.7% id in 129 aa" FT /db_xref="GOA:Q8Z1Y3" FT /db_xref="InterPro:IPR017463" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z1Y3" FT /protein_id="CAD08162.1" FT /translation="MRYAIMVTGPAYGTQQASSALQFAHALLNEGHELASVFFYREGVY FT NANLLTSPASDEYDLVRVWQKLNTQHGVALNICVAAALRRGIIDETEAGRLELPSANLQ FT PGFTLSGLGALAEASLTCDRVVQF" FT CDS 253017..253373 FT /transl_table=11 FT /gene="yheM" FT /gene_synonym="STY4348" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 13.0 kDa FT protein in rpsl-fkpa intergenic region yheM SW:YHEM_ECOLI FT (P45531) (119 aa) fasta scores: E(): 0, 84.0% id in 119 aa, FT and to Haemophilus influenzae hypothetical protein Hi0576.1 FT hi0576.1 SW:YHEM_HAEIN (Q57194) (119 aa) fasta scores: E(): FT 8.8e-18, 41.5% id in 118 aa, and to Chromatium vinosum FT intracellular sulfur oxidation protein DsrF dsrF TR:O87897 FT (EMBL:U84760) (136 aa) fasta scores: E(): 1.9e-05, 26.1% id FT in 111 aa" FT /note="Orthologue of E. coli YHEM_ECOLI; Fasta hit to FT YHEM_ECOLI (119 aa), 84% identity in 119 aa overlap" FT /db_xref="GOA:Q8Z1Y2" FT /db_xref="InterPro:IPR017462" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z1Y2" FT /protein_id="CAD08163.1" FT /translation="MKRIAFVFSTAPHGSASGREGLDALLATSALTEALGVFFISDGVF FT QLLPGQKPDAVLARDYIATFKLFDLYDIDQCWICAASLRERGLENVNFVVNATPLEPVA FT LRRELGNYDVILRF" FT CDS 253381..253668 FT /transl_table=11 FT /gene="yheL" FT /gene_synonym="STY4349" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical 10.7 kDa FT protein in rpsl-fkpa intergenic region yheL SW:YHEL_ECOLI FT (P45530) (95 aa) fasta scores: E(): 4.1e-23, 68.4% id in 95 FT aa, and to Chromatium vinosum DsrH dsrH TR:O87898 FT (EMBL:U84760) (102 aa) fasta scores: E(): 0.0018, 32.1% id FT in 81 aa" FT /db_xref="GOA:Q8Z1Y1" FT /db_xref="InterPro:IPR007215" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z1Y1" FT /protein_id="CAD08164.1" FT /translation="MLHTLPHCASGVDFPALLRLLKEGDALLLLQDGVTVAIEGNRFLE FT SLRDAPITVYALKEDIDARGLGGQISDSVVRVDYTEFVRLTVKYANQMAW" FT misc_feature 253794..254162 FT /note="Pfam match to entry PF00164 Ribosomal_S12, Ribosomal FT protein S12, score 271.90, E-value 8.3e-78" FT CDS 253794..254168 FT /transl_table=11 FT /gene="rpsL" FT /gene_synonym="STY4350" FT /product="30S ribosomal subunit protein S12" FT /note="Orthologue of E. coli rpsL (RS12_ECOLI); Fasta hit FT to RS12_ECOLI (123 aa), 100% identity in 123 aa overlap" FT /db_xref="GOA:P0A7S7" FT /db_xref="InterPro:IPR005679" FT /db_xref="UniProtKB/Swiss-Prot:P0A7S7" FT /protein_id="CAD08165.1" FT /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKP FT NSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDC FT SGVKDRKQARSKYGVKRPKA" FT misc_feature 253920..253943 FT /note="PS00055 Ribosomal protein S12 signature" FT CDS 254264..254734 FT /transl_table=11 FT /gene="rpsG" FT /gene_synonym="STY4351" FT /product="30S ribosomal subunit protein S7" FT /note="Orthologue of E. coli rpsG (RS7_ECOLI); Fasta hit to FT RS7_ECOLI (178 aa), 99% identity in 155 aa overlap" FT /db_xref="GOA:P0A2B4" FT /db_xref="HSSP:1HUS" FT /db_xref="InterPro:IPR005717" FT /db_xref="UniProtKB/Swiss-Prot:P0A2B4" FT /protein_id="CAD08166.1" FT /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYS FT ALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWI FT VEAARKRGDKSMALRLANELSDAADNKGTAVKKREDVHRMAEANKAFAHYRW" FT misc_feature 254267..254731 FT /note="Pfam match to entry PF00177 Ribosomal_S7, Ribosomal FT protein S7p/S5e, score 330.20, E-value 2.4e-95" FT misc_feature 254321..254401 FT /note="PS00052 Ribosomal protein S7 signature" FT CDS 254831..256945 FT /transl_table=11 FT /gene="fusA" FT /gene_synonym="STY4352" FT /product="elongation factor G" FT /note="Similar to Salmonella typhimurium elongation factor FT g fusA SW:EFG_SALTY (P26229) (703 aa) fasta scores: E(): 0, FT 100.0% id in 703 aa, and to Escherichia coli elongation FT factor g fusa or fus or faR SW:EFG_ECOLI (P02996) (703 aa) FT fasta scores: E(): 0, 97.6% id in 703 aa" FT /db_xref="GOA:P0A1H4" FT /db_xref="HSSP:1ELO" FT /db_xref="InterPro:IPR004161" FT /db_xref="UniProtKB/Swiss-Prot:P0A1H4" FT /protein_id="CAD08167.1" FT /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHD FT GAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMR FT VLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKTRLG FT ANPVPLQLAIGAEEGFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLANEWHQNL FT IESAAEASEELMEKYLGGEELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQAMLDA FT VIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYS FT GVVNSGDTVLNSVKTARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCD FT PENPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTII FT AGMGELHLDIIVDRMKREFNVEANVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGH FT VVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKSGPLAGYPVVDLGV FT RLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDL FT SRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNV FT AQAVIEARGK" FT misc_feature 254852..256309 FT /note="Pfam match to entry PF00009 GTP_EFTU, Elongation FT factor Tu family, score 510.80, E-value 8.7e-151" FT misc_feature 254879..254902 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 254981..255028 FT /note="PS00301 GTP-binding elongation factors signature" FT misc_feature 256397..256912 FT /note="Pfam match to entry PF00679 EFG_C, Elongation factor FT G C-terminus, score 362.20, E-value 5.3e-105" FT CDS 257017..258201 FT /transl_table=11 FT /gene="tufA" FT /gene_synonym="tufB" FT /gene_synonym="STY4353" FT /product="elongation factor Tu" FT /note="Identical to Salmonella typhimurium elongation FT factor Tu tufa and tufB SW:EFTU_SALTY (P21694) (393 aa) FT fasta scores: E(): 0, 100.0% id in 393 aa, and to FT Escherichia coli elongation factor tu SW:EFTU_ECOLI FT (P02990) (393 aa) fasta scores: E(): 0, 99.7% id in 392 aa" FT /db_xref="GOA:P0A1H6" FT /db_xref="HSSP:1D8T" FT /db_xref="InterPro:IPR004160" FT /db_xref="UniProtKB/Swiss-Prot:P0A1H6" FT /protein_id="CAD08168.1" FT /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAAR FT AFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAIL FT VVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDF FT PGDDTPIVRGSALKALEGDAEWEAKIIELAGFLDSYIPEPERAIDKPFLLPIEDVFSIS FT GRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRG FT IKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTG FT TIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLG" FT misc_feature 257044..258138 FT /note="Pfam match to entry PF00009 GTP_EFTU, Elongation FT factor Tu family, score 488.60, E-value 3.4e-144" FT misc_feature 257071..257094 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 257167..257214 FT /note="PS00301 GTP-binding elongation factors signature" FT CDS 258386..258580 FT /transl_table=11 FT /gene="yheA" FT /gene_synonym="STY4354" FT /product="bacterioferritin-associated ferredoxin" FT /note="Similar to Salmonella typhimurium FT bacterioferritin-associated ferredoxin. FT bacterioferritin-associated ferredoxin SW:BFD_SALTY FT (O68925) (64 aa) fasta scores: E(): 1e-26, 100.0% id in 64 FT aa, and to Escherichia coli bacterioferritin-associated FT ferredoxin bfD SW:BFD_ECOLI (P13655) (64 aa) fasta scores: FT E(): 2.1e-23, 87.5% id in 64 aa" FT /db_xref="GOA:P0A1Z7" FT /db_xref="InterPro:IPR007419" FT /db_xref="UniProtKB/Swiss-Prot:P0A1Z7" FT /protein_id="CAD08169.1" FT /translation="MYVCLCNGISDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRA FT AREVMQDELTQMPEFKEIA" FT misc_feature 258652..259113 FT /note="Pfam match to entry PF01334 Bacteriofer, FT Bacterioferritin, score 364.30, E-value 1.3e-105" FT CDS 258652..259128 FT /transl_table=11 FT /gene="bfr" FT /gene_synonym="STY4355" FT /product="bacterioferritin" FT /note="Similar to Salmonella typhimurium bacterioferritin FT SW:BFR_SALTY (O68926) (158 aa) fasta scores: E(): 0, 99.4% FT id in 158 aa, and to Escherichia coli bacterioferritin bfR FT SW:BFR_ECOLI (P11056) (158 aa) fasta scores: E(): 0, 89.0% FT id in 155 aa" FT /db_xref="GOA:Q8Z1Y0" FT /db_xref="HSSP:1BCF" FT /db_xref="InterPro:IPR009040" FT /db_xref="UniProtKB/TrEMBL:Q8Z1Y0" FT /protein_id="CAD08170.1" FT /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLTRLNDVEY FT HESIDEMKHADKYIERILFLEGIPNLQDLGKLGIGEDVEEMLRSDLRLELEGAKDLREA FT IAYADNVHDYVSRDMMIEILADEEGHIDWLETELDLIAKLGMQNYLQSQIKVTD" FT CDS complement(259125..259592) FT /transl_table=11 FT /gene="hopD" FT /gene_synonym="STY4356" FT /product="Type III leader peptidase" FT /note="Similar to Salmonella typhimurium leader peptidase FT HopD hopD SW:HOPD_SALTY (O68927) (155 aa) fasta scores: FT E(): 0, 99.4% id in 155 aa, and to Escherichia coli leader FT peptidase HopD hopD SW:HOPD_ECOLI (O68932) (155 aa) fasta FT scores: E(): 0, 68.9% id in 148 aa" FT /db_xref="GOA:Q8Z1X9" FT /db_xref="InterPro:IPR014032" FT /db_xref="UniProtKB/TrEMBL:Q8Z1X9" FT /protein_id="CAD08171.1" FT /translation="MFVALPFLIFYASFSLLLGIYDARTGLLPDRFTCPLLWGGLLYHQ FT ICLPERLPDALWGAIAGYGGFALIYWGYRLRYQKEGLGYGDVKYLAALGAWHCWETLPL FT LVFLAAMLACGRFGVALLVRGKSALINPLPFGPWLAVAGFITGWKVFFPDG" FT misc_feature complement(259155..259529) FT /note="Pfam match to entry PF01478 Peptidase_C20, Type III FT leader peptidase family, score 128.90, E-value 9.3e-35" FT CDS 259972..260283 FT /transl_table=11 FT /gene="rpsJ" FT /gene_synonym="STY4357" FT /product="30S ribosomal subunit protein S10" FT /note="Orthologue of E. coli rpsJ (RS10_ECOLI); Fasta hit FT to RS10_ECOLI (103 aa), 98% identity in 103 aa overlap" FT /db_xref="GOA:P67905" FT /db_xref="HSSP:1J5E" FT /db_xref="InterPro:IPR018268" FT /db_xref="UniProtKB/Swiss-Prot:P67905" FT /protein_id="CAD08172.1" FT /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTR FT KERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG" FT misc_feature 259984..260271 FT /note="Pfam match to entry PF00338 Ribosomal_S10, Ribosomal FT protein S10p/S20e, score 210.60, E-value 2.4e-59" FT misc_feature 260056..260103 FT /note="PS00361 Ribosomal protein S10 signature" FT CDS 260316..260945 FT /transl_table=11 FT /gene="rplC" FT /gene_synonym="STY4358" FT /product="50S ribosomal subunit protein L3" FT /note="Orthologue of E. coli rplC (RL3_ECOLI); Fasta hit to FT RL3_ECOLI (209 aa), 98% identity in 209 aa overlap" FT /db_xref="GOA:P60445" FT /db_xref="InterPro:IPR019926" FT /db_xref="UniProtKB/Swiss-Prot:P60445" FT /protein_id="CAD08173.1" FT /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGY FT RAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVELFADV FT KKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAG FT QMGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPAVKA" FT misc_feature 260337..260927 FT /note="Pfam match to entry PF00297 Ribosomal_L3, Ribosomal FT protein L3, score 360.70, E-value 1.5e-104" FT misc_feature 260616..260687 FT /note="PS00474 Ribosomal protein L3 signature" FT CDS 260956..261561 FT /transl_table=11 FT /gene="rplD" FT /gene_synonym="STY4359" FT /product="50S ribosomal subunit protein L4" FT /note="Orthologue of E. coli rplD (RL4_ECOLI); Fasta hit to FT RL4_ECOLI (201 aa), 100% identity in 201 aa overlap" FT /db_xref="GOA:P60727" FT /db_xref="InterPro:IPR013005" FT /db_xref="UniProtKB/Swiss-Prot:P60727" FT /protein_id="CAD08174.1" FT /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRA FT QKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGA FT LKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARN FT LHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA" FT misc_feature 260986..261552 FT /note="Pfam match to entry PF00573 Ribosomal_L4, Ribosomal FT protein L4/L1 family, score 194.40, E-value 1.8e-54" FT CDS 261558..261860 FT /transl_table=11 FT /gene="rplW" FT /gene_synonym="STY4360" FT /product="50S ribosomal subunit protein L23" FT /note="Orthologue of E. coli rplW (RL23_ECOLI); Fasta hit FT to RL23_ECOLI (100 aa), 99% identity in 100 aa overlap" FT /db_xref="GOA:Q8XGM6" FT /db_xref="HSSP:1N88" FT /db_xref="InterPro:IPR013025" FT /db_xref="UniProtKB/Swiss-Prot:Q8XGM6" FT /protein_id="CAD08175.1" FT /translation="MIREERLLKVLRAPHVSEKASTAMEKTNTIVLKVAKDATKAEIKA FT AVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE" FT misc_feature 261579..261854 FT /note="Pfam match to entry PF00276 Ribosomal_L23, Ribosomal FT protein L23, score 155.10, E-value 6.2e-45" FT misc_feature 261798..261845 FT /note="PS00050 Ribosomal protein L23 signature" FT CDS 261878..262699 FT /transl_table=11 FT /gene="rplB" FT /gene_synonym="STY4361" FT /product="50S ribosomal subunit protein L2" FT /note="Orthologue of E. coli rplB (RL2_ECOLI); Fasta hit to FT RL2_ECOLI (272 aa), 99% identity in 272 aa overlap" FT /db_xref="GOA:P60427" FT /db_xref="InterPro:IPR014722" FT /db_xref="UniProtKB/Swiss-Prot:P60427" FT /protein_id="CAD08176.1" FT /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLVEKNSKSGGRNN FT NGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYI FT LAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQ FT IVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRG FT TAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK" FT misc_feature 262001..262696 FT /note="Pfam match to entry PF00181 Ribosomal_L2, Ribosomal FT Proteins L2, score 479.60, E-value 2.4e-140" FT misc_feature 262529..262564 FT /note="PS00467 Ribosomal protein L2 signature" FT CDS 262716..262994 FT /transl_table=11 FT /gene="rpsS" FT /gene_synonym="STY4362" FT /product="30S ribosomal subunit protein S19" FT /note="Orthologue of E. coli rpsS (RS19_ECOLI); Fasta hit FT to RS19_ECOLI (91 aa), 99% identity in 91 aa overlap" FT /db_xref="GOA:P66492" FT /db_xref="HSSP:1FJG" FT /db_xref="InterPro:IPR005732" FT /db_xref="UniProtKB/Swiss-Prot:P66492" FT /protein_id="CAD08177.1" FT /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMI FT GLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKK" FT misc_feature 262722..262964 FT /note="Pfam match to entry PF00203 Ribosomal_S19, Ribosomal FT protein S19, score 186.40, E-value 1.9e-53" FT misc_feature 262872..262946 FT /note="PS00323 Ribosomal protein S19 signature" FT CDS 263009..263341 FT /transl_table=11 FT /gene="rplV" FT /gene_synonym="STY4363" FT /product="50S ribosomal subunit protein L22" FT /note="Orthologue of E. coli rplV (RL22_ECOLI); Fasta hit FT to RL22_ECOLI (110 aa), 100% identity in 110 aa overlap" FT /db_xref="GOA:P61178" FT /db_xref="InterPro:IPR005727" FT /db_xref="UniProtKB/Swiss-Prot:P61178" FT /protein_id="CAD08178.1" FT /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAV FT LVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHIT FT VVVSDR" FT misc_feature 263021..263335 FT /note="Pfam match to entry PF00237 Ribosomal_L22, Ribosomal FT protein L22p/L17e, score 208.80, E-value 8e-59" FT misc_feature 263255..263329 FT /note="PS00464 Ribosomal protein L22 signature" FT misc_feature 263359..263544 FT /note="Pfam match to entry PF00417 Ribosomal_S3_N, FT Ribosomal protein S3, N-terminal domain., score 105.00, FT E-value 1.1e-32" FT CDS 263359..264060 FT /transl_table=11 FT /gene="rpsC" FT /gene_synonym="STY4364" FT /product="30S ribosomal subunit protein S3" FT /note="Orthologue of E. coli rpsC (RS3_ECOLI); Fasta hit to FT RS3_ECOLI (232 aa), 100% identity in 232 aa overlap" FT /db_xref="GOA:P0A7V7" FT /db_xref="InterPro:IPR008282" FT /db_xref="UniProtKB/Swiss-Prot:P0A7V7" FT /protein_id="CAD08179.1" FT /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK FT ELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIA FT EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIA FT RTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAA FT QPKKQQRKGRK" FT misc_feature 263551..263694 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 35.90, E-value 9.1e-07" FT misc_feature 263713..263964 FT /note="Pfam match to entry PF00189 Ribosomal_S3_C, FT Ribosomal protein S3, C-terminal domain., score 189.40, FT E-value 2e-58" FT misc_feature 263845..263949 FT /note="PS00548 Ribosomal protein S3 signature" FT misc_feature 264073..264465 FT /note="Pfam match to entry PF00252 Ribosomal_L16, Ribosomal FT protein L16, score 311.40, E-value 3.6e-90" FT CDS 264073..264483 FT /transl_table=11 FT /gene="rplP" FT /gene_synonym="STY4365" FT /product="50S ribosomal subunit protein L16" FT /note="Orthologue of E. coli rplP (RL16_ECOLI); Fasta hit FT to RL16_ECOLI (136 aa), 99% identity in 136 aa overlap" FT /db_xref="GOA:Q8XET6" FT /db_xref="InterPro:IPR000114" FT /db_xref="UniProtKB/Swiss-Prot:Q8XET6" FT /protein_id="CAD08180.1" FT /translation="MLQPKRTKFRKMHKGRNRGLAAGADVSFGSFGLKAVGRGRLTARQ FT IEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYE FT MDGVPEELAREAFKLAAAKLPIKTTFVTKTVM" FT misc_feature 264244..264279 FT /note="PS00586 Ribosomal protein L16 signature 1" FT misc_feature 264313..264348 FT /note="PS00701 Ribosomal protein L16 signature 2" FT CDS 264483..264674 FT /transl_table=11 FT /gene="rpmC" FT /gene_synonym="STY4366" FT /product="50S ribosomal subunit protein L29" FT /note="Orthologue of E. coli rpmC (RL29_ECOLI); Fasta hit FT to RL29_ECOLI (63 aa), 98% identity in 63 aa overlap" FT /db_xref="GOA:P66171" FT /db_xref="InterPro:IPR018254" FT /db_xref="UniProtKB/Swiss-Prot:P66171" FT /protein_id="CAD08181.1" FT /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQ FT VRRDVARVKTLLTEKAGA" FT misc_feature 264489..264671 FT /note="Pfam match to entry PF00831 Ribosomal_L29, Ribosomal FT L29 protein, score 91.90, E-value 1.2e-23" FT misc_feature 264597..264641 FT /note="PS00579 Ribosomal protein L29 signature" FT CDS 264674..264928 FT /transl_table=11 FT /gene="rpsQ" FT /gene_synonym="STY4367" FT /product="30S ribosomal subunit protein S17" FT /note="Orthologue of E. coli rpsQ (RS17_ECOLI); Fasta hit FT to RS17_ECOLI (83 aa), 99% identity in 83 aa overlap" FT /db_xref="GOA:P66452" FT /db_xref="HSSP:1RIP" FT /db_xref="InterPro:IPR019979" FT /db_xref="UniProtKB/Swiss-Prot:P66452" FT /protein_id="CAD08182.1" FT /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKMH FT VHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL" FT misc_feature 264701..264907 FT /note="Pfam match to entry PF00366 Ribosomal_S17, Ribosomal FT protein S17, score 150.30, E-value 1.8e-43" FT misc_feature 264839..264877 FT /note="PS00056 Ribosomal protein S17 signature" XX SQ Sequence 265050 BP; 61027 A; 68172 C; 73707 G; 62144 T; 0 other; gggtagagag gtaatttatg tgatattgat cacaaagtta ctgtgtaaaa aaacaacgaa 60 tctcattttt agcccttaaa aggctatttt atgtgagata tttcacactt ttattttggt 120 gctttgttga atttttgtga tcctcttcac atgaaatttt aagcccgggt aacgtcaata 180 cgatccgaca aacattttgt cgcgagccct ctcacgttat gtcattcagc aacttccttt 240 tgtgtctctt ttcgtcttat ttgagccata ctatgatttt tactggttgg caaaaaggac 300 acggcatgaa actcatcggt agctacacca gcccttttgt gcgcaaaatc tctgttctgc 360 tgctcgaaaa gggtattacc ttcgaattta ttaatgaact accttacgag gcggataacg 420 gcgtggcgca atacaaccct ctgggtaagg tgccagcgct ggtgacggag aaaggggagt 480 actggttcga ttcgccgatc atcgcggaat atattgaact gctggatatc gcgccagcga 540 tgctcccgcg tgacccgatg gcagcgctta aagttcgcca gcttgaagcg ttggctgacg 600 gcattatgga tgcagcgttg gtgtctgtac gcgaacaggc gcgcccggcg gcgcaacaat 660 cggaaacgga actgctgcgc cagcgggaaa aaatcaaccg cagcctggat atgctcgaaa 720 gttatctgag cgacgggacg ctaaaaacgg atacggtcaa tctggcgact atcgcgattg 780 cctgtgcggt aggctatctc aacttccgcc gggtcgcgcc cggctggtgt gttagccgcc 840 cccacctggt caaactggtc gaaacgcttt ttcaacgcga aagctttgcc cgcaccgaag 900 cgccaaaggc ttgacgcgca ttatgtccgc ctgagcaaac tcacgttaca atccccctta 960 tgtcgatatc cctctcccgc caggagaggg ccaccaacag ccaggcattt tcatgacaag 1020 cgaaacgcgt acactctaca gccagcttcc tgctatcgat cgtttattgc acgatagcgc 1080 ctttctttct ctgcgcgatc ggtatggcca tacccaggtg gttgatctgc ttaggcggat 1140 gcttgacgac gcgcgcgacg tcatacggaa tacgcaaacg cttcccgact ggtacgcaga 1200 ctgggcgcaa gaggcgaaac tccggctgga aaatgcggcg caaagcgcgc tgcgcccggt 1260 gattaacctg acggggacgg tgctgcacac caatcttggc cgcgcattgc aggcgcaaga 1320 agcgattgag gcggtaacgc aggcgatgcg cgcgccggtg acgctggaat acgatttaga 1380 tggcgccggg cgggggcatc gcgaccgggc gctggcgacg ctgttatgcc gtatcaccgg 1440 ggcggaggac gcctgtatcg tcaataacaa tgcggcggcg gtattgctga tgctggcggc 1500 gaccgccagc ggcaaagagg tggtggtttc gcgtggcgaa ctggtcgaaa tcggcggcgc 1560 gtttcgtatt ccggatgtta tgcgccaggc gggctgtacg ctgcatgaag tgggcaccac 1620 caaccggacg cacgcgaaag attaccgtca ggcggtaaat gaaaataccg ggctgttgat 1680 gaaggtgcat accagtaatt acagcattga gggctttacc aaaacggtag aggaagcgga 1740 actggcggaa atcgggcgag agctggatat tccggtggtg gcggatctgg gcagcggttc 1800 gctggtggat ttaagccaat atggcttacc caaagagccg atgccgcaac agctcattgc 1860 cgcaggcgtc agcctggtaa gcttctccgg cgataagttg ttgggcgggc cgcaggccgg 1920 gatcatcgtc ggcaaaaaag cgatgattgc ccaactgcaa agccatccgc tgaaacgcgc 1980 tctgcgcgcg gataaaatga cgctggcggc gctggaggca acgttacgtc tgtatctgca 2040 cccggaagcg ttggcggaga aattacccac cctgcgtctg ttaacccgca gtgaagcgtc 2100 gattcgcgaa caagcgcagc ggttacaggc gcggttggcg gcacgttacg gcgatgaatt 2160 tgcgctggag gttaaaccct gtctgtcgca aatcggcagc ggttcattac cggtagaccg 2220 cctccccagc gccgccatga cctttacccc gcacgacggg cgcggtagtc ggctggaggc 2280 gctggcggcc cgctggcgca cgctgcctgt accggtcatt ggccgaattt atgatggccg 2340 tttatggctg gatatgcgct gtcttgaaga cgaaagccgg tttatggaga tgatgctgaa 2400 atgattattg caactgccgg acacgtagac cacggtaaaa cgacgttgct ccaggcgatt 2460 accggcatta atgccgatcg cctgccggaa gagaaaaaac gcgggatgac tatcgatctg 2520 ggctacgcct attggccgca gccggatggt cgtgtgctgg gctttatcga tgtgcctggg 2580 catgaaaaat tcctctctaa catgctggcg ggcgtaggcg gtatcgatca cgctttgctg 2640 gtggtcgcct gtgatgacgg cgttatggcg caaacgcgcg agcatttaca gatcctacag 2700 ctgacgggca atctccagct caccgtcgcg ctgaccaaag ccgatcgcgt ggacgaggcg 2760 cgtatcagcg aagtacgtga agaggtgctg gcggcgctcg acaactatgg cttcgccgat 2820 accgttttat ttgtcaccgc cgccaatgaa ggacgcggta ttgcagaact tcgcgctcat 2880 ttacagcagc ttcctgcacg tttacacgcc gcgcagcatc gcttccgtct ggctatcgac 2940 cgtgcgttta cggtgaaagg ggcgggactg gtggtgaccg gaacggcgtt gagcggagag 3000 gtaaacgtgg gcgatacgct atggttgacc ggcgttaata cgccgatgcg cgtacgaagt 3060 ctacacgcgc aaaatcagcc taccgaccat gcgtatgccg ggcaacgtat tgcgctcaat 3120 attgcgggcg atgcggagaa ggagcagctt aaccgcggcg actggctgct ttccgatgcg 3180 ccggcggggg aggctttttc ccgggtgatc gtttctctgg cgcttcatgc gccgctttcc 3240 caatggcaac cgctacatat tcaccatgcc gccagccatg tgaccggtcg cgtctctttg 3300 ctggaaggcg cgctggccga gctgatcttt gatacgccgt tgtggctggc cgataatgac 3360 agactggtat tgcgtgatat ttccgcacgc gccacccttg ccggcgcacg cgtggtgacg 3420 cttaacgcgc cgcgccgcgg taaacgtaag ccagattatt tgcactggct ttcaacgctt 3480 gccgatgcgc aggacgatag cgcagcgttg gccattcatc tggaacgcgg ggccgtcaac 3540 ctgccggatt tcggttgggc gcgtcagctt aatcctctcg gtatgcgtca gcttattgag 3600 caacatggtt ttatccaggc cggagacaat ctgttaagcg cgcccgtcgc cgcccgctgg 3660 cagcgtaaga ttcttgatac gctggcgacc taccacgaac agcaccgcga tgaaccgggg 3720 ccgggacgcg agcgtttacg ccgcatggcc ctgccaatgg aggatgaagc gctggttctg 3780 atgctgatcg agcggatgcg cgacgagggc ctgattcata gccatcacgg ttggttgcat 3840 ctgccggatc ataaagcggg atttagcgat gagcagcagg ccgtctggca aaaagtcgaa 3900 ccgctatttg gcgatgagcc ctggtgggta cgcgatctgg cgaaagagac cggaacggaa 3960 gaacaattga tgcggctggt gctgcggcag gcggcacagc aaggcatcat taccgcgatc 4020 gtaaaagatc ggtactatcg taacgatcgg attgtcgctt tcgccaatat gatccgcgag 4080 ctggatcaag agagaggatc aacctgtgcg gcggattttc gcgacaggct gaatgtaggg 4140 cggaaactgg ccattcagat tcttgaatat tttgaccgga ttggatttac acgacgtcgt 4200 gggaatgatc atttattacg tgatgcgtta ttatttccgc aaaaagaatg aaatggttaa 4260 attaaataac aaatgaagca atacaattat tgcgttgctt tataaaaagc acatcagcaa 4320 atgaacctga tgtgcttttt atttttctgg cttcttaaaa tagccatcgt gagcctatta 4380 tcagaatagt tttgcccata ttctttgcgc cttattcagg cgactcacga cgagattgtg 4440 gaactttatc gcgcggcgat gtaacgcctt tgcccggtgg cgcggacgct taccgggcct 4500 gcgtagacga tgcaggccgg atagggcgta acacgttatc ttcggtcgag cttttgctgc 4560 gccagccaga cggcgcccag cctgcctgcc tgatttccca gttggcaggg ctgaatcggc 4620 acctggagcg cctcccacat ttcaaacgtt tcaagatgcc gcgtcaggag cgggtagagc 4680 ttttcctgtt cgcttattcc tccgccgatc agcaccacgc ccggatcaaa catagagatc 4740 acgctgtaaa cgccgcgtga cagataacgc gcccagtcat tgaccgcctc acgcagatga 4800 acatcggtcg ccattcgttc gaagatcaca tccgcaggcg gcatctcttc tgcaggcagc 4860 gccagagcct ggcggcacga cgccattaat ccgctggttg acgcgatttt atgcatactt 4920 tcgccattat tcccgaccgg catgacgccg aattcaccgg cgtggaaatg tgcgccgcga 4980 tacagttctc gtccgacgat aataccgccg ccaatgccgg ttccaatggt gatacagacc 5040 agattgtcat aatgctgccc ggcgcctcgc cacatttcgc ccagcgccgc gcagttcgcg 5100 tcgttctcca cgaccagcgg cagatcggtt agcccgctga acaactccat caggttgacg 5160 tcatccaggt atgccagcgc gcccgctttt gccgcatgac cgttatgggg attaatatgg 5220 ccggggaaac tgaccccgat tgccgcaatg tcatagtcct gctggcaacg cgccaccaca 5280 tcctgccatt tgcgggtaaa cgtggaggcg tcctctggcg tatcgaattg atgatgggtt 5340 aattcttcgc cgtcactgtt aatcacgcca tatttgacgt gagttcctcc cacatcaata 5400 ccgatatatt gctgcatagt gttctccgta cgttaaacag gcacctgttt agtatggcta 5460 aaaccagacg gagaaacgta aaggaaagta attcgtgatt gctgtcgtaa agcgagaaac 5520 cattggcgaa aaattcacca gtaccgtcta cccttgtgga gtacctttac aataaggagt 5580 tggtcatgac gaacaatccc ccttcaacac gtattcagcc aagtgaatac gggtacccac 5640 tgaagttaaa agcccgctat gacaatttta ttggcggtga ctgggttgcg cccgccgacg 5700 gcgaatatta tcaaaacctg acgccagtga ccggccagcc gctatgtgaa gtcgcttcct 5760 ccggtaaaaa agatatcgat ttagcgctcg acgccgcgca taaggcgaaa gataagtggg 5820 cgcatacgtc agtacaagac cgtgccgcta tcttgtttaa gatcgccgat cggatggaac 5880 aaaacctcga actgttggcg acagcggaaa cttgggataa cggtaaaccg attcgtgaaa 5940 ccagtgccgc cgacataccg ctggcgatcg atcatttccg ctatttcgcc tcctgtatac 6000 gtgcgcagga gggcgggatc agcgaagttg atagcgaaac cgtggcctac cattttcacg 6060 aaccgcttgg tgtcgtgggg cagataatcc cgtggaactt tccgctgctg atggcaagct 6120 ggaaaatggc gccagcgctg gcggcaggta actgcgtggt gcttaaaccg gcacgcctga 6180 cgccgctttc cgttttactg ttaatggaag tcattggcga tctgttaccg ccgggcgttg 6240 tcaacgtcgt gaacggcgcg ggcggcgaga ttggcgaata tctggcgacc tcaaaacgta 6300 tcgcgaaggt ggcgtttacc ggttcgacgg aagtgggtca acagatcatg cagtacgcca 6360 cgcagaacat tattccggtg acgctggagt taggcggcaa gtcgcccaat atcttcttcg 6420 ccgacgtgat ggatgaggaa gatgcgttct ttgataaagc gctggaggga tttgccctgt 6480 ttgcctttaa ccagggcgag gtgtgtacct gtccaagccg tgcgctggtt caggagtcca 6540 tctatgagcg ctttatggag cgcgctattc gccgggtgga gagcattcgc agcgggaacc 6600 cgctagatag cggtacacag atgggagcgc aggtctctca cggccagctt gagactatcc 6660 tcaattatat cgatatcggt aaaaaagagg gggccgatat tctgaccggt gggcgacgc |