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EBI DbfetchID AL627274; SV 1; linear; genomic DNA; STD; PRO; 256050 BP. XX AC AL627274; XX DT 25-OCT-2001 (Rel. 69, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete DE chromosome; segment 10/20 XX KW . XX OS Salmonella enterica subsp. enterica serovar Typhi OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. XX RN [1] RP 1-256050 RX DOI; 10.1038/35101607 RX PUBMED; 11677608. RA Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J., RA Churcher C., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M., RA Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A., RA Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T., RA Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A., RA Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M., RA Rutherford K., Simmonds M., Skelton J., Stevens K., Whitehead S., RA Barrell B.G.; RT "Complete genome sequence of a multiple drug resistant Salmonella enterica RT serovar Typhi CT18"; RL Nature 413(6858):848-852(2001). XX RN [2] RP 1-256050 RA Parkhill J.; RT ; RL Submitted (25-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. XX DR EMBL-CON; AL513382. DR GOA; P0A250. DR HSSP; 1EZC; P08839. DR InterPro; IPR015813; Pyrv/PenolPyrv_Kinase_cat. DR RFAM; RF01409; STnc250. DR UniProtKB/Swiss-Prot; P0A250; PT1_SALTI. XX CC E-mail: parkhill@sanger.ac.uk CC CC Notes: CC Details of S. typhi sequencing at the Sanger Centre CC are available on the World Wide Web. CC (URL, http://www.sanger.ac.uk/Projects/S_typhi/) XX FH Key Location/Qualifiers FH FT source 1..256050 FT /organism="Salmonella enterica subsp. enterica serovar FT Typhi" FT /strain="CT18" FT /mol_type="genomic DNA" FT /db_xref="taxon:90370" FT CDS complement(136..918) FT /pseudo FT /transl_table=11 FT /gene="STY2469" FT /product="putative bacteriophage tail protein (pseudogene)" FT /note="Similar to part of e.g. Yersinia pestis plasmid pMT1 FT putative lambda tail fiber protein Y1051 TR:O68722 FT (EMBL:AF074611) (978 aa) fasta scores: E(): 0, 62.8% id in FT 172 aa and Bacteriophage P2 probable tail fiber protein FT SW:VPH_BPP2 (P26700) (669 aa) fasta scores: E(): 4.4e-23, FT 44.6% id in 249 aa" FT CDS 966..1169 FT /transl_table=11 FT /gene="STY2470" FT /product="homolog of virulence protein msgA" FT /note="Similar to Salmonella typhimurium virulence protein FT msgA SW:MSGA_SALTY (Q56031) (79 aa) fasta scores: E(): FT 4.9e-06, 46.9% id in 64 aa" FT /db_xref="InterPro:IPR010391" FT /db_xref="UniProtKB/TrEMBL:Q8XFI5" FT /protein_id="CAD07476.1" FT /translation="MPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHV FT CTKTEKAHLHPILEKMFAVAGK" FT CDS complement(1361..1621) FT /transl_table=11 FT /gene="STY2471" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="InterPro:IPR018550" FT /db_xref="UniProtKB/TrEMBL:Q8Z577" FT /protein_id="CAD07477.1" FT /translation="MGISKDVALVHFAGIYTGIGLGAYIKSKSRDDMRVNSAFTFGEKA FT FLGWNFGAFSTEAYIRHFSNGSLTDKNSGHNFVGASISYNF" FT RBS 2641..2645 FT /note="possible RBS" FT CDS 2653..3300 FT /transl_table=11 FT /gene="STY2472" FT /gene_synonym="narP" FT /product="nitrate/nitrite response regulator protein NarP" FT /note="Fasta hit to UHPA_ECOLI (196 aa), 37% identity in FT 195 aa overlap" FT /note="Fasta hit to FIMZ_ECOLI (210 aa), 30% identity in FT 200 aa overlap" FT /note="Fasta hit to CPXR_ECOLI (232 aa), 31% identity in FT 229 aa overlap" FT /note="Fasta hit to NARL_ECOLI (216 aa), 43% identity in FT 214 aa overlap" FT /note="Fasta hit to UVRY_ECOLI (218 aa), 34% identity in FT 200 aa overlap" FT /note="Orthologue of E. coli narP (NARP_ECOLI); Fasta hit FT to NARP_ECOLI (215 aa), 88% identity in 215 aa overlap" FT /db_xref="GOA:Q8Z576" FT /db_xref="HSSP:1RNL" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q8Z576" FT /protein_id="CAD07478.1" FT /translation="MPEVTPFQVLIVDDHPLMRRGIRQLLELDPAFYVVAEAGDGASAI FT DLANRIEPDLILLDLNMKGLSGLDTLNALRRDGVTAQIIILTVSDSASDIYALIDAGAD FT GYLLKDSDPEVLLEAIRKGANGGKVFSDRVNEYLRERERFGAQEDPFSILTERELDVLH FT ELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQTRGMQ" FT misc_feature 2671..3012 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 142.40, E-value 7.8e-39" FT misc_feature 3103..3297 FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 102.80, E-value FT 6.9e-27" FT misc_feature 3154..3237 FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature" FT repeat_region complement(3315..9613) FT /note="This sequence is duplicated at base position FT 3830133..3836431" FT CDS complement(3344..4387) FT /transl_table=11 FT /gene="ccmH1" FT /gene_synonym="STY2473" FT /product="cytochrome c-type biogenesis protein H1" FT /note="Orthologue of E. coli ccmH (CCMH_ECOLI); Fasta hit FT to CCMH_ECOLI (350 aa), 74% identity in 336 aa overlap" FT /db_xref="GOA:Q8XES8" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q8XES8" FT /protein_id="CAD07479.1" FT /translation="MRLLPGMVMLMLALVISGSARATTDVMPFKDEAQEQQFRQLTEQL FT RCPKCQNNSIADSNAMIATDMRRRVYDLMQEGKSRQEIIDYMVARYGNFVTYDPPLTPL FT TVLLWVLPLAAIVAGGWIIVARTRRRVRLRREPLPADTPVCGARAGWGVYVPGAVIALA FT VGAGSYALTGSYPQVRAWQQATAQTPGLLARALDPQAQPLNEEEMARLALGLRTRLQND FT AGNVEGWLMLGRTGMVLGNAGTATGAYANAYRLDPENRDAALGYAEALTRSSDPEDNRR FT GGELLRQLVSRDHTDIRVLSLYAFSAFEQQRFGEAVAAWEMMLKLLPAGDARRAVIERS FT IRLAQEK" FT CDS complement(4384..4941) FT /transl_table=11 FT /gene="dsbE1" FT /gene_synonym="STY2474" FT /product="thiol:disulfide interchange protein" FT /note="Orthologue of E. coli dsbE (DSBE_ECOLI); Fasta hit FT to DSBE_ECOLI (185 aa), 86% identity in 185 aa overlap" FT /db_xref="GOA:Q8XFE5" FT /db_xref="HSSP:1KNG" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/Swiss-Prot:Q8XFE5" FT /protein_id="CAD07480.1" FT /translation="MKRNVLLLPLLIFLLIAAALLWQLARNAQGDDPTNLESALTGKPV FT PAFRLESLETPGQYYQAEVLTQGKPVLLNVWATWCPTCRAEHQYLNRLAAQGIRVVGLN FT YKDDRAKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGRGIIRYRHAGDL FT NARVWESELKPLWDRYSREAAQ" FT RBS complement(4395..4399) FT /note="possible RBS" FT misc_feature complement(4672..4728) FT /note="PS00194 Thioredoxin family active site" FT CDS complement(4938..6869) FT /transl_table=11 FT /gene="ccmF1" FT /gene_synonym="STY2475" FT /product="cytochrome c-type biogenesis protein F1" FT /note="Fasta hit to NRFE_ECOLI (552 aa), 38% identity in FT 611 aa overlap" FT /note="Orthologue of E. coli ccmF (CCMF_ECOLI); Fasta hit FT to CCMF_ECOLI (647 aa), 85% identity in 646 aa overlap" FT /db_xref="GOA:Q8XFH4" FT /db_xref="InterPro:IPR003568" FT /db_xref="UniProtKB/TrEMBL:Q8XFH4" FT /protein_id="CAD07481.1" FT /translation="MMPEYGHALLCLALGVALLLSVYPLWGVARGDARMMASAGVFAWL FT LFICVAGAFFVLVHAFVVNDFTVAYVAGNSNTQLPVWYRVAATWGAHEGSLLLWVLLMS FT GWTLAVAVFSRQVPADIVARVLAVMGMVCAGFLAFILFTSGPFARTLPAFPVEGRDLNP FT LLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLSGRLDSAFTRFARPWTLAAWVFLTLG FT IVLGSAWAYYELGWGGWWFWDPVENASFMPWLAGTALLHSLAVTEQRAGFKAWTLLLSI FT CAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVTGGSLLLFAVRGHRVRSR FT VNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFTWLM FT VPFALLLGVGPLVRWGRDRPRNIRKLLLTALVSTLVLSVLLPWLLEDRIIAMTAVGMAM FT ACWIAVLAVAEAVQRVSRGTKTSLSYWGMVAAHLGLAVTITGIAFSQNYSVERDVRMRA FT GDSVTIHDYRFTFREVRDITGPNYRGGVALIGVTRHGEPEAVLHAEKRLYNTSRMVMTE FT AAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGGLLCLADPRYRR FT RKPLPEAG" FT RBS complement(4946..4950) FT /note="possible RBS" FT misc_feature complement(5511..6164) FT /note="Pfam match to entry PF01578 CytC_asm, Cytochrome C FT assembly protein, score 204.40, E-value 1.8e-57" FT CDS complement(6866..7345) FT /transl_table=11 FT /gene="ccmE1" FT /gene_synonym="STY2476" FT /product="cytochrome c-type biogenesis protein E1" FT /note="Orthologue of E. coli ccmE (CCME_ECOLI); Fasta hit FT to CCME_ECOLI (159 aa), 84% identity in 159 aa overlap" FT /db_xref="GOA:Q8XEN3" FT /db_xref="HSSP:1SR3" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/Swiss-Prot:Q8XEN3" FT /protein_id="CAD07482.1" FT /translation="MNLRRKNRLWVVCAVLAGLALTTALVLYALRANIDLFYTPGEILY FT GKRETQQLPAVGQRLRVGGMVMPGSVRRDPDSLKVNFSLYDAEGSVTVSYEGILPDLFR FT EGQGVVVQGTLEKGNHVLAHEVLAKHDENYTPPEVEKAMQENHRRPQRADKDTSS" FT RBS complement(6879..6884) FT /note="possible RBS" FT CDS complement(7342..7554) FT /transl_table=11 FT /gene="ccmD1" FT /gene_synonym="STY2477" FT /product="heme exporter protein D1" FT /note="Orthologue of E. coli ccmD (CCMD_ECOLI); Fasta hit FT to CCMD_ECOLI (69 aa), 77% identity in 70 aa overlap" FT /db_xref="GOA:Q8XGH4" FT /db_xref="InterPro:IPR007078" FT /db_xref="UniProtKB/TrEMBL:Q8XGH4" FT /protein_id="CAD07483.1" FT /translation="MSPAFSSWSDFFAMGGYAFFVWLAVAMTVAPLALLALHTVLQRRA FT ILRGVAQQRAREARMRAAQAQQEAA" FT RBS complement(7350..7355) FT /note="possible RBS" FT CDS complement(7551..8288) FT /transl_table=11 FT /gene="ccmC1" FT /gene_synonym="STY2478" FT /product="heme exporter protein C1" FT /note="Orthologue of E. coli ccmC (CCMC_ECOLI); Fasta hit FT to CCMC_ECOLI (245 aa), 87% identity in 245 aa overlap" FT /db_xref="GOA:Q8Z575" FT /db_xref="InterPro:IPR003557" FT /db_xref="UniProtKB/TrEMBL:Q8Z575" FT /protein_id="CAD07484.1" FT /translation="MWKTLHQLAAPPRLYQICGRLVPWLAAAGIIVLATGWVRGFGFAP FT ADYQQGESYRIMYLHVPAAIWSMGIYAAMAVAAFTGLVWQMKMASLAVAAMAPVGAVYT FT FIALVTGAAWGKPMWGTWWVWDARLTSELVLLFLYAGVIALWHAFDDRKMAGRAAGILV FT LVGVVNLPVIHYSVEWWNTLHQGSTRMQLSIDPAMRSPLRWAIAGFLLLFMTLALMRMR FT NLILLMEKRRPWVSELILKRGHR" FT misc_feature complement(7605..8219) FT /note="Pfam match to entry PF01578 CytC_asm, Cytochrome C FT assembly protein, score 204.50, E-value 1.6e-57" FT RBS complement(8302..8307) FT /note="possible RBS" FT CDS complement(8340..8999) FT /transl_table=11 FT /gene="ccmB1" FT /gene_synonym="STY2479" FT /product="heme exporter protein B1" FT /note="Orthologue of E. coli ccmB (CCMB_ECOLI); Fasta hit FT to CCMB_ECOLI (220 aa), 85% identity in 219 aa overlap" FT /db_xref="GOA:Q7CB58" FT /db_xref="InterPro:IPR003544" FT /db_xref="UniProtKB/TrEMBL:Q7CB58" FT /protein_id="CAD07485.1" FT /translation="MMWRVFCLELRVAFRHGADIAGPLWFFLMVITLFPLSVGPQPQLL FT ARIAPGIIQVAALLASLLALERLFRDDLQDGSLEQLMLLPVPLPAVVLAKVLAHWAVTG FT LPLMMLSPLVALLLGMDVYGWKIMALTLLLGTPALGFLAAPGVGLTAGLRRGGVLLGIL FT VLPLSVPVLIFATAAMDAASMHLPVDGYLAVLGALLAGSATLSPFATAAALRISTQ" FT CDS complement(8996..9613) FT /transl_table=11 FT /gene="ccmA1" FT /gene_synonym="STY2480" FT /product="heme exporter protein A1" FT /note="Fasta hit to YBBA_ECOLI (228 aa), 32% identity in FT 203 aa overlap" FT /note="Fasta hit to BTUD_ECOLI (249 aa), 31% identity in FT 206 aa overlap" FT /note="Orthologue of E. coli ccmA (CCMA_ECOLI); Fasta hit FT to CCMA_ECOLI (205 aa), 80% identity in 200 aa overlap" FT /db_xref="GOA:P61377" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:P61377" FT /protein_id="CAD07486.1" FT /translation="MLEARDLYCERDERTLFRGLSFTVEAGEWVQVTGGNGAGKTTLLR FT LLTGLARPDGGEVYWQGEPLRRVRDSFHRSLLWIGHQPGIKTRLTARENLHFFHPGDGA FT RLPEALAQAGLAGFEDVPVAQLSAGQQRRVALARLWLTRAALWVLDEPFTAIDVNGVAR FT LTRRMAAHTAQGGMVILTTHQPLPGAADTVRRLALTGGGAGL" FT misc_feature complement(9011..9535) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 165.00, E-value 1.2e-45" FT misc_feature complement(9194..9238) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(9491..9514) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(9634..10236) FT /transl_table=11 FT /gene="STY2481" FT /gene_synonym="napC" FT /product="cytochrome c-type protein NapC" FT /note="Orthologue of E. coli napC (NAPC_ECOLI); Fasta hit FT to NAPC_ECOLI (200 aa), 88% identity in 200 aa overlap" FT /db_xref="GOA:Q8Z573" FT /db_xref="InterPro:IPR011885" FT /db_xref="UniProtKB/TrEMBL:Q8Z573" FT /protein_id="CAD07487.1" FT /translation="MENSNRKLGWIKRVWRWWRSPSRLALGTLLLIGFIGGVIFWGGFN FT TGMEKANTEEFCISCHEMRNTVYEEYMETVHYNNRSGVRATCPDCHVPHEWGPKMIRKI FT KASKELYAKVFGLIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTAQKG FT VAAKMHDQAVKDGQTCIDCHKGIAHKLPDMRDVKPGF" FT misc_feature complement(9685..9702) FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT misc_feature complement(9781..9798) FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT misc_feature complement(10051..10068) FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT RBS complement(10242..10248) FT /note="possible RBS" FT CDS complement(10246..10695) FT /transl_table=11 FT /gene="STY2482" FT /gene_synonym="napB" FT /product="cytochrome c-type protein NapB precursor" FT /note="Orthologue of E. coli napB (NAPB_ECOLI); Fasta hit FT to NAPB_ECOLI (149 aa), 92% identity in 149 aa overlap" FT /db_xref="HSSP:1JNI" FT /db_xref="InterPro:IPR011031" FT /db_xref="UniProtKB/TrEMBL:Q8XGM8" FT /protein_id="CAD07488.1" FT /translation="MKSHDLMKALCQWMATLALVVSGAVWAANGVDLSQSPEVSGTQEG FT AIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTH FT FMDSDGKVSGNVAPRRYFCLQCHVPQSDTAPIIDNTFTPSQGYGK" FT misc_feature complement(10312..10329) FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT misc_feature complement(10432..10449) FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT RBS complement(10703..10706) FT /note="possible RBS" FT CDS complement(10811..11680) FT /transl_table=11 FT /gene="STY2483" FT /gene_synonym="napH" FT /product="ferredoxin-type protein NapH" FT /note="Orthologue of E. coli napH (NAPH_ECOLI); Fasta hit FT to NAPH_ECOLI (287 aa), 89% identity in 278 aa overlap" FT /db_xref="GOA:Q8Z572" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q8Z572" FT /protein_id="CAD07489.1" FT /translation="MANRKRDAGREARAKKGWWRSHRWLVLRRISQFMVLGMFLSGPWL FT GFWVLHGNYSSSLLFDTLPLTDPLITLESLASGHLPATVALTGAVIIAVLYALAGKRLF FT CSWVCPLNPVTDLANWMRRKFDLNQSATIPRHIRYVLLVVVLIGSALTGTLLWEWINPV FT SLLGRSLIMGFSSGALLIIALFLFDLLVVEHGWCGHICPMGALYGVLGSKGVVTVTAKK FT REKCNRCMDCFHVCPEPHVLRAPVLDEQSPAQVTHRDCMTCGRCVDVCSEDVFTITIHN FT IIRDASRR" FT misc_feature complement(10853..10924) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 17.50, E-value 0.005" FT misc_feature complement(10970..11005) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT CDS complement(11667..12362) FT /transl_table=11 FT /gene="STY2484" FT /gene_synonym="napG" FT /product="ferredoxin-type protein NapG" FT /note="Orthologue of E. coli napG (NAPG_ECOLI); Fasta hit FT to NAPG_ECOLI (231 aa), 94% identity in 231 aa overlap" FT /db_xref="GOA:Q8Z571" FT /db_xref="HSSP:1CLF" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q8Z571" FT /protein_id="CAD07490.1" FT /translation="MSRTAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARATGVR FT LRPPGALNENVFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCED FT IPCAKVCPSGALNKDIASIDDSRMGLAVLLDQENCLNFQGLRCDVCYRECPKIDEAITL FT ELDRNMRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFG FT WLEGKDGKS" FT RBS complement(11687..11691) FT /note="possible RBS" FT misc_feature complement(11751..11828) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 13.90, E-value 0.018" FT misc_feature complement(12132..12203) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 29.20, E-value 7.5e-05" FT misc_feature complement(12147..12182) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT CDS complement(12369..14855) FT /transl_table=11 FT /gene="STY2485" FT /gene_synonym="napA" FT /product="probable nitrate reductase" FT /note="Orthologue of E. coli napA (NAPA_ECOLI); Fasta hit FT to NAPA_ECOLI (828 aa), 94% identity in 828 aa overlap" FT /db_xref="GOA:Q8Z570" FT /db_xref="HSSP:1OGY" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z570" FT /protein_id="CAD07491.1" FT /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAP FT CRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPMLRM FT KDGSYHKDGEFTPVSWEQAFDVMEEKFKTALKEKGPEAIGMFGSGQWTIWEGYAAAKLF FT KAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPI FT LWSRITNRRLSDPNVKVAVLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAV FT NQDFFTKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFDEYKAFVAEYTLDK FT TAEMTGVPKDQLEQLAQLYADPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQ FT PGCGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVG FT LHAVAQDRALKDGKLNVYWVMCNNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSAL FT SADLILPTAMWVEKEGAYGNAERRTQFWRQQIKAPGEAKSDLWQLVQFSRRFKTEEVWP FT EALLAQKPELRGKTLYDVLFATPAVSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAW FT FGRGHGHDLAPFDDYHNARGLRWPVVEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKA FT VIFALPFEPAAESPDNEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDA FT KARDLRRGDKVKVSSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQLVNNLTLDATDPL FT SKETDFKKCAVKLAKV" FT misc_feature complement(12390..12716) FT /note="Pfam match to entry PF01568 Molydop_binding, FT Molydopterin dinucleotide binding domain, score 152.00, FT E-value 1e-41" FT misc_feature complement(13158..13346) FT /note="Pfam match to entry PF00384 molybdopterin, FT Prokaryotic molybdopterin oxidoreductases, score 90.80, FT E-value 1.2e-28" FT misc_feature complement(14673..14726) FT /note="PS00551 Prokaryotic molybdopterin oxidoreductases FT signature 1" FT CDS complement(14852..15115) FT /transl_table=11 FT /gene="STY2486" FT /gene_synonym="yojF" FT /gene_synonym="napD" FT /product="putative napAB assembly protein" FT /note="Orthologue of E. coli yojF (NAPD_ECOLI); Fasta hit FT to NAPD_ECOLI (87 aa), 82% identity in 87 aa overlap" FT /db_xref="InterPro:IPR005623" FT /db_xref="UniProtKB/TrEMBL:Q8XGF6" FT /protein_id="CAD07492.1" FT /translation="MRTNWQVCSLVVQAKSQNIAAIGTQLNTLPGCEVALSDVESGQLI FT VVAEADQSETLMQTIESVRNVEGVLAVSLVYHQQDEQGEETP" FT RBS complement(14863..14866) FT /note="possible RBS" FT CDS complement(15105..15596) FT /transl_table=11 FT /gene="STY2487" FT /gene_synonym="napF" FT /product="ferredoxin-type protein NapF" FT /note="Orthologue of E. coli napF (NAPF_ECOLI); Fasta hit FT to NAPF_ECOLI (164 aa), 76% identity in 162 aa overlap" FT /db_xref="GOA:Q8Z569" FT /db_xref="HSSP:1BWE" FT /db_xref="InterPro:IPR004496" FT /db_xref="UniProtKB/TrEMBL:Q8Z569" FT /protein_id="CAD07493.1" FT /translation="MVDLSRRSMLTGSWRNASNGILPPWARETTYFLAHCLRCDACIQA FT CEADILQRGMGGYPSVNFKRGECSFCYACAQACPESLFLPRRTRAWDLIFTLTENCLAR FT QSVECHRCLDSCEPMAITFRPTLSGIYQPQLDSQACNGCGACVAICPVSAIKAENHHAH FT " FT RBS complement(15123..15126) FT /note="possible RBS" FT misc_feature complement(15129..15200) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 34.50, E-value 2.5e-06" FT misc_feature complement(15144..15179) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT misc_feature complement(15345..15416) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 13.70, E-value 0.019" FT misc_feature complement(15360..15395) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT misc_feature complement(15441..15512) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 13.90, E-value 0.018" FT misc_feature complement(15456..15491) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT CDS 16010..16504 FT /transl_table=11 FT /gene="STY2488" FT /gene_synonym="eco" FT /product="ecotin precursor" FT /note="Orthologue of E. coli eco (ECOT_ECOLI); Fasta hit to FT ECOT_ECOLI (162 aa), 79% identity in 164 aa overlap" FT /db_xref="GOA:Q8Z568" FT /db_xref="HSSP:1FI8" FT /db_xref="InterPro:IPR005658" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z568" FT /protein_id="CAD07494.1" FT /translation="MKMFVPAVVFAALASASAWANNGDTAQPLEKIAPYPQAEKGMKRQ FT VITLTPQQDESTLKVELLIGQTLNVDCNQHRLGGTLETKTLEGWGYDYYVFDNVTSPVS FT TMMACPEGKKEQKFVTAWLGEDGMLRYNSKLPIVVYTPANVDVKYRIWKADANVQNAIA FT R" FT CDS complement(16713..18356) FT /transl_table=11 FT /gene="STY2489" FT /gene_synonym="yojI" FT /product="putative ABC transporter ATP-binding protein" FT /note="Orthologue of E. coli yojI (YOJI_ECOLI); Fasta hit FT to YOJI_ECOLI (547 aa), 91% identity in 547 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z567" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:Q8Z567" FT /protein_id="CAD07495.1" FT /translation="MELLILVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETVD FT TTVMVLPEFLGLLLLLMVVTLGSQLALTALGHHFVYRLRSEFIKRILDTHVERIEQLGS FT ASLLAGLTSDIRNITIAFVRLPELVQGIVLTVGSAAYLAMLSTKMLLVTAIWMAVTIWG FT GFVLVARVYQHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEQIFQQCYTPDAKEYR FT HHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLRTPLLS FT AVGALPTLLTAQVAFNKLNKFALAPYKPDFPQPKAFPDWKTLELRNVVFHYQDNAFSVG FT PINLTIHRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGTILLDGQPVAAGQPEDYRKLF FT SAVFTDVWLFDRLLGPQGKPANPALVEKWLEHLKMTHKLELNDGCILNLKLSKGQKKRI FT ALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHAD FT RLLEMRNGQLTELTGDERDAASRDAVARTA" FT misc_feature complement(16782..17312) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 154.50, E-value 1.8e-42" FT misc_feature complement(16965..17009) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(17268..17291) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(18432..19082) FT /transl_table=11 FT /gene="STY2490" FT /gene_synonym="alkB" FT /product="AlkB protein" FT /note="Orthologue of E. coli alkB (ALKB_ECOLI); Fasta hit FT to ALKB_ECOLI (216 aa), 80% identity in 216 aa overlap" FT /db_xref="GOA:Q8Z566" FT /db_xref="InterPro:IPR005123" FT /db_xref="UniProtKB/TrEMBL:Q8Z566" FT /protein_id="CAD07496.1" FT /translation="MLDLFADEAPWQEPLAPGAVVLRRFAFRAAQSLLDDIGFVASQSP FT FRQMVTPGGYTMSVAMTNCGALGWTTDGHGYCYAVRDPLTDKPWPALPLSFASVCRQAA FT IAAGYASFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGVPAVFQFGGLRRSD FT PLQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMTGEFRYNLTFRQAAEKE" FT CDS complement(19085..20146) FT /transl_table=11 FT /gene="STY2491" FT /gene_synonym="ada" FT /product="ADA regulatory protein" FT /EC_number="2.1.1.63" FT /note="Similar to Salmonella typhimurium regulatory protein FT adA SW:ADA_SALTY (P26189) (352 aa) fasta scores: E(): 0, FT 98.6% id in 352 aa" FT /note="Orthologue of E. coli ada (ADA_ECOLI); Fasta hit to FT ADA_ECOLI (354 aa), 75% identity in 353 aa overlap" FT /db_xref="GOA:Q8Z565" FT /db_xref="HSSP:1SFE" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q8Z565" FT /protein_id="CAD07497.1" FT /translation="MMKKALLTDDECWLRVQARDASADGRFVFAVRTTGVFCRPSCRSK FT RALRKNVRFFANAQQALDAGFRPCKRCQPDNARAQQRRLDKIACACRLLEQETPVTLAS FT LAQAVAMSPFHLHRLFKASTGMTPKGWQQAWRARRLREALAKGEPITAAIYRAGFPDSS FT SYYRHADQTLGMTAKQFRKGGDNVSVRYALTDWVYGRCLVAESGRGICAILPGDSDDAL FT LAELHTLFPAARHEPADAPFQQRVRQVVAAINTRDVLLSLPLDIQGTAFQQQVWQALCA FT IPCGETVSYQQLAATIGKPTAVRAVASACGANKLAMVIPCHRVVRRDGALSGYRWGVRR FT KAQLLKREAQKEE" FT RBS complement(19088..19092) FT /note="possible RBS" FT misc_feature complement(19088..19420) FT /note="Pfam match to entry PF01035 Methyltransf_1, FT 6-O-methylguanine DNA methyltransferase, score 225.60, FT E-value 7.4e-64" FT misc_feature complement(19172..19192) FT /note="PS00374 Methylated-DNA--protein-cysteine FT methyltransferase active site" FT misc_feature complement(19595..19852) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 94.00, E-value 3.1e-24" FT misc_feature complement(19616..19741) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature" FT misc_feature complement(19763..19891) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature" FT CDS complement(20227..21279) FT /transl_table=11 FT /gene="STY2492" FT /gene_synonym="yojL" FT /gene_synonym="apbE" FT /product="thiamine biosynthesis protein" FT /note="Similar to Salmonella typhimurium thiamine FT biosynthesis lipoprotein ApbE precursor apbE SW:APBE_SALTY FT (P41780; O06948) (350 aa) fasta scores: E(): 0, 99.7% id in FT 350 aa. Contains probable N-terminal signal sequence" FT /note="Orthologue of E. coli yojL (APBE_ECOLI); Fasta hit FT to APBE_ECOLI (351 aa), 80% identity in 351 aa overlap" FT /db_xref="GOA:Q8Z564" FT /db_xref="InterPro:IPR003374" FT /db_xref="UniProtKB/TrEMBL:Q8Z564" FT /protein_id="CAD07498.1" FT /translation="MKMTFCRAVCLAAAFLLMGCDEAPETTTASPAAQVLEGKTMGTLW FT RVSVVGIDAKRAAELQTKIQTQLDADDWLLSTYKNDSALMRFNHSRSLAPWPVSEAMAD FT IVTSALRIGAKTDGAMDITVGPLVNLWGFGPDRQPLHIPTPAQIDAAKAKTGLQHLQVI FT DRAGHQFLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGIARYLVSVGGALSSRGMNAQ FT GLPWRVAIQKPTDRENAVQAIVDINGHGISTSGSYRNYYELDGKRVSHVIDPQTGRPIE FT HNLVSVTVIAPTALEADGWDTGLMVLGTQKAQEVVRREGLAVFMIMKEGEGFKTWMSPQ FT FKTFLVSDKN" FT misc_feature complement(21160..21183) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(21220..21252) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS complement(21290..21293) FT /note="possible RBS" FT CDS complement(21394..22530) FT /transl_table=11 FT /gene="ompC" FT /gene_synonym="STY2493" FT /product="outer membrane protein C" FT /note="Identical to Salmonella typhi TY2 outer membrane FT protein C precursor ompC SW:OMPC_SALTI (P09878) (378 aa) FT fasta scores: E(): 0, 100.0% id in 378 aa and similar to FT Salmonella typhimurium outer membrane protein C precursor FT SW:OMPC_SALTY (O52503) (378 aa) fasta scores: E(): 0, 98.1% FT id in 378 aa" FT /note="Fasta hit to PHOE_ECOLI (351 aa), 57% identity in FT 381 aa overlap" FT /note="Fasta hit to YEDS_ECOLI (397 aa), 63% identity in FT 397 aa overlap" FT /note="Fasta hit to OMPF_ECOLI (362 aa), 58% identity in FT 386 aa overlap" FT /note="Fasta hit to NMPC_ECOLI (365 aa), 62% identity in FT 379 aa overlap" FT /note="Orthologue of E. coli OMPC_ECOLI; Fasta hit to FT OMPC_ECOLI (367 aa), 79% identity in 384 aa overlap" FT /db_xref="GOA:P0A264" FT /db_xref="InterPro:IPR001702" FT /db_xref="PDB:1IIV" FT /db_xref="UniProtKB/Swiss-Prot:P0A264" FT /protein_id="CAD07499.1" FT /translation="MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLFGKVDGLHYFS FT DDKGSDGDQTYMRIGFKGETQVNDQLTGYGQWEYQIQGNQTEGSNDSWTRVAFAGLKFA FT DAGSFDYGRNYGVTYDVTSWTDVLPEFGGDTYGADNFMQQRGNGYATYRNTDFFGLVDG FT LDFALQYQGKNGSVSGENTNGRSLLNQNGDGYGGSLTYAIGEGFSVGGAITTSKRTADQ FT NNTANARLYGNGDRATVYTGGLKYDANNIYLAAQYSQTYNATRFGTSNGSNPSTSYGFA FT NKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDISNGYGASYGDQDIVKYVDVGATYYFNK FT NMSTYVDYKINLLDKNDFTRDAGINTDDIVALGLVYQF" FT misc_feature complement(21397..22452) FT /note="Pfam match to entry PF00267 Gram-ve_porins, General FT diffusion Gram-negative porins, score 715.20, E-value FT 4.5e-218" FT misc_feature complement(21493..21543) FT /note="PS00576 General diffusion Gram-negative porins FT signature" FT RBS complement(22540..22543) FT /note="possible RBS" FT misc_RNA 22599..22955 FT /gene="micF" FT /note="micF RNA post-transcriptionally regulates outer FT membrane protein F (OmpF) as a response to stess by binding FT and destabilising the ompF RNA message." FT CDS 23258..25927 FT /transl_table=11 FT /gene="STY2494" FT /gene_synonym="yojN" FT /product="putative two-component system sensor kinase" FT /note="Similar to Salmonella typhimurium putative regulator FT YojN yojN TR:Q9X6X6 (EMBL:AF153717) (889 aa) fasta scores: FT E(): 0, 99.6% id in 889 aa and Proteus mirabilis regulator FT of swarming behavior precursor rsbA TR:O85661 FT (EMBL:AF071215) (897 aa) fasta scores: E(): 0, 32.5% id in FT 908 aa" FT /note="Orthologue of E. coli yojN (YOJN_ECOLI); Fasta hit FT to YOJN_ECOLI (890 aa), 85% identity in 890 aa overlap" FT /db_xref="GOA:Q8Z563" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:Q8Z563" FT /protein_id="CAD07500.1" FT /translation="MSQSDTTVSTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAW FT LKDKSYQIVDITHAIHKRVDTWRYVTWQIYDNIAATTTPSTGEGLQETRLKQDVYYLEK FT PRRKTEALIFGSHDSATLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLILISTLPL FT KDLSSGFKESTIGNIVDSRRAEMLQQANALDERESFSSLRKLAWQNGHYFTLRTTFNQP FT GHLATVVAFDLPINDLIPPGMPLDSFRIEPDATQTTGRSSEKEAPDSVTISFNGSKIEI FT SSALNSTGMRLIWQVPFGTLLLDTLQNILLPLLLNIGLLALALFGYATFRHQPGRSTES FT TSGNAANNELRVLRAINEEIVSLLPLGLLVYDQEGNRTVISNKIADHLLPHLNLQNITS FT MAEQHQGVIQATINNELYEIRLFRSQIAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKN FT QQGRAAFMQNISNTLKEPVRQLAVNAAAVTTPESLKLADQADVLVRMIDEIQLANMLEN FT DAWKSEATLFSLQDLIDEVVPEVLPAIKRKGLQLLINNHLSGNDERWGDRDALRRILLL FT LIQYAVTTTAMGKITLEVEQDESIAERLTFRILDTGEGVTLNEIDNLHFPYMNETQGDR FT YGKANPLTFWLCNQLARKLGGHLNIKARETLGTRYTVHVKMLPHDQHTQVEERLLDDVS FT VMVDVTSNEVRAIVLRQLENWGATCITPDERQISQEYDLFLTDNPSNLTASGLLLSDDE FT SGVRKIGPGQLRVNFNMSNAMQEAVLQLIEEQLAQEEIPASPLGGDENAELHASGYYAL FT FVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCVTLEHLIREKDA FT PGIEKYISVIDAYVKSLL" FT misc_feature 24644..25282 FT /note="Pfam match to entry PF00512 signal, Histidine FT kinase, score -22.50, E-value 0.00077" FT CDS 25944..26594 FT /transl_table=11 FT /gene="STY2495" FT /gene_synonym="rcsB" FT /product="regulator of capsule synthesis B component" FT /note="Identical to Salmonella typhi TY2 capsular synthesis FT regulator component B rcsB SW:RCSB_SALTI (Q56127) (216 aa) FT fasta scores: E(): 0, 100.0% id in 216 aa" FT /note="Fasta hit to NARP_ECOLI (215 aa), 31% identity in FT 198 aa overlap" FT /note="Orthologue of E. coli rcsB (RCSB_ECOLI); Fasta hit FT to RCSB_ECOLI (216 aa), 99% identity in 216 aa overlap" FT /db_xref="GOA:Q56127" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q56127" FT /protein_id="CAD07501.1" FT /translation="MNNMNIIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL FT PKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIE FT GIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFA FT EGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPTDKE" FT misc_feature 25953..26303 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 114.50, E-value 2e-30" FT misc_feature 26385..26582 FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 82.10, E-value FT 1.2e-20" FT misc_feature 26436..26519 FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature" FT CDS complement(26697..29543) FT /transl_table=11 FT /gene="rcsC" FT /gene_synonym="STY2496" FT /product="sensor protein RcsC" FT /EC_number="2.7.3.-" FT /note="Similar to Escherichia coli sensor protein RcsC rcsC FT SW:RCSC_ECOLI (P14376; Q47586; P76457) (933 aa) fasta FT scores: E(): 0, 89.0% id in 931 aa. Contains hydrophobic, FT probable membrane-spanning region near N-terminus" FT /db_xref="GOA:Q56128" FT /db_xref="HSSP:1JBE" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/Swiss-Prot:Q56128" FT /protein_id="CAD07502.1" FT /translation="MKYLASFRTTLKVSRYLFRALALLIWLLIAFVSVFYIVNALHQRE FT SEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLTAENGVMSSRARDDKMVVPDFEP FT LFADSDCAAMGSAWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLREM FT PVERDDALKALHERIMKYRNAPQEESGNNLFWISQGARQGVGYFYALTPVYLANRLQAL FT LGVEQSIRMENFFTPGSLPMGVTIIDENGHSLISLTGPDGIIKAEPRWMQERSWFGYTP FT GFRELVLKKSLPPSSLSIVYSVPVDLVLERIRILILNAILLNVLVGAGLFTLARMYERR FT IFIPAESDAQRLEEHEQFNRKIVASAPVGICILRTIDGVNILSNELAHTYLNMLTHEDR FT QRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSTRVKMEESLQE FT MAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSL FT LLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVP FT VSLNGDPMRLQQVISNLLSNAIKFTDIGCIVLHVRCDGDYLSIRVRDTGVGIPAKEVVR FT LFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTLRIPLYGAQ FT YPVKKSVEGLAGTCCWLAVRNTSLCQFIETSLARSGVHTQRYEGQEPAADDILIVDDAL FT EHTWQGRAAVVFCRRHIGIPLERAPGEWVHSVASVHELPALLARIYSIELDSEALSSAL FT PTTDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNAIDI FT VLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLD FT ALKQTLAVYAERVRKTRA" FT misc_feature complement(26736..27071) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 140.30, E-value 3.5e-38" FT misc_feature complement(27477..28109) FT /note="Pfam match to entry PF00512 signal, Histidine FT kinase, score 300.30, E-value 2.4e-86" FT RBS complement(29559..29562) FT /note="possible RBS" FT repeat_region complement(29612..30342) FT /note="IS200" FT CDS complement(29729..30187) FT /transl_table=11 FT /gene="tnpA" FT /gene_synonym="STY2497" FT /product="transposase for insertion sequence element IS200" FT /note="Identical to Salmonella typhimurium and Salmonella FT typhi transposase for insertion sequence element IS200 tnpA FT SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0, FT 100.0% id in 152 aa" FT /db_xref="GOA:P59697" FT /db_xref="InterPro:IPR002686" FT /db_xref="UniProtKB/Swiss-Prot:P59697" FT /protein_id="CAD07503.1" FT /translation="MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLC FT EWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNRE FT FWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK" FT misc_feature complement(29822..30133) FT /note="Pfam match to entry PF01797 Transposase_17, FT Transposase IS200 like, score 244.30, E-value 1.7e-69" FT CDS complement(30373..33009) FT /transl_table=11 FT /gene="STY2499" FT /gene_synonym="gyrA" FT /product="DNA gyrase subunit A" FT /EC_number="5.99.1.3" FT /note="Fasta hit to PARC_ECOLI (752 aa), 36% identity in FT 753 aa overlap" FT /note="Orthologue of E. coli gyrA (GYRA_ECOLI); Fasta hit FT to GYRA_ECOLI (875 aa), 92% identity in 871 aa overlap" FT /db_xref="GOA:Q8Z562" FT /db_xref="HSSP:1AB4" FT /db_xref="InterPro:IPR013757" FT /db_xref="UniProtKB/TrEMBL:Q8Z562" FT /protein_id="CAD07504.1" FT /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVH FT RRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVD FT GQGNFGSIDGDSAAAMRYTEIRLAKIAHGLMADLEKETVDFVDNYDGTEKIPDVMPTKI FT PNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAI FT INGRRGIEEAYRTGRGKVYIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELV FT KDKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHG FT QPKIMNLKDIISAFVRHRREVVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRR FT APTPAEAKAALISRPWDLGNVAAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAI FT LDLRLQKLTGLEHEKLLDEYKELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDER FT RTEITANSADINIEDLISQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEED FT FIDRLLVANTHDTILCFSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAIL FT PVREYEEGVNVFMATASGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEV FT MLFSAAGKVVRFKEDAVRAMGRTATGVRGIKLAGDDKVVSLIIPRGEGAILTVTQNGYG FT KRTAADEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEI FT SVVGRNTQGVILIRTAEDENVVGLQRVAEPVDDEELDAIDGSVTEGDEDIAPEAESDDD FT VADDADE" FT misc_feature complement(31468..32916) FT /note="Pfam match to entry PF00521 DNA_topoisoIV, DNA FT gyrase/topoisomerase IV, subunit A, score 1089.40, E-value FT 0" FT RBS complement(33022..33025) FT /note="possible RBS" FT CDS complement(33419..34621) FT /transl_table=11 FT /gene="STY2500" FT /product="putative MR-MLE-family protein" FT /note="Similar to Escherichia coli starvation sensing FT protein RspA rspA SW:RSPA_ECOLI (P38104) (404 aa) fasta FT scores: E(): 1.3e-27, 28.4% id in 405 aa which can prevent FT homoserine lactone-induced effects when over-expressed" FT /db_xref="GOA:Q8Z561" FT /db_xref="InterPro:IPR013342" FT /db_xref="UniProtKB/TrEMBL:Q8Z561" FT /protein_id="CAD07505.1" FT /translation="MKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGLSGIGEVGLA FT YGAGAKAGVGIIRDLASLIVGEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDIAL FT WDIKGKYLGVPVYQLLGGKTNEKLRTYASQLQFGWGDKRQILVTPEEYAEAARAALDDG FT YDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVE FT IHSLLGTNSAIQFAKAIEKYRIFLYEEPSHPLNSDNMQKVSRSTTIPIATGERSYTRWG FT YRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVCGGPVSTVAALHMET FT AIPNFIIHEHHTNAMKASIRELCTHDYQPENGYYVAPEQPGLGQELNDEVVKEYLAYVI FT K" FT misc_feature complement(33494..34609) FT /note="Pfam match to entry PF01188 MR_MLE, Mandelate FT racemase / muconate lactonizing enzyme family, score FT 151.60, E-value 1.3e-41" FT RBS complement(34627..34630) FT /note="possible RBS" FT CDS complement(34636..35961) FT /pseudo FT /transl_table=11 FT /gene="STY2501" FT /product="putative transmembrane transpot protein FT (pseudogene)" FT /note="Similar to e.g. Agrobacterium vitis putative FT tartrate transporter ttuB SW:TUB3_AGRVI (P70786) (449 aa) FT fasta scores: E(): 0, 34.6% id in 327 aa. Contains FT hydrophobic, probable membrane-spanning regions. This CDS FT contains an in-frame stop at codon 85. The sequence has FT been checked and is believed to be correct" FT RBS 36187..36191 FT /note="possible RBS" FT CDS 36200..36894 FT /pseudo FT /transl_table=11 FT /gene="STY2504" FT /product="putative transcriptional regulator (pseudogene)" FT /note="Shows weak similarity to e.g. Chelatobacter heintzii FT nta operon transcriptional regulator ntaR or nmoR FT SW:NTRA_CHEHE (P54988) (210 aa) fasta scores: E(): 0.0021, FT 25.6% id in 125 aa. Contains a frameshift after codon 83. FT The sequence has been checked and is believed to be FT correct" FT misc_feature 36269..36448 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 43.10, E-value FT 9.4e-12" FT CDS 36977..37705 FT /transl_table=11 FT /gene="STY2505" FT /gene_synonym="ubiG" FT /product="3-demethylubiquinone-9 3-methyltransferase" FT /EC_number="2.1.1.64" FT /note="Orthologue of E. coli ubiG (UBIG_ECOLI); Fasta hit FT to UBIG_ECOLI (240 aa), 92% identity in 240 aa overlap" FT /db_xref="GOA:Q8Z560" FT /db_xref="InterPro:IPR010233" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z560" FT /protein_id="CAD07508.1" FT /translation="MNTEKPSVAHNVDHNEIAKFEAVASRWWDLKGEFKPLHRINPLRL FT GYITERSGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIE FT VEYVQETVEEHAAKHAQQYDVVTCMEMLEHVPDPQSVVHACAQLVKPGGEVFFSTLNRN FT GKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLSWVDETVLKEQHITGLHYNPITNT FT FKLGPGVDVNYMLHTRAKKA" FT misc_feature 37010..37699 FT /note="Pfam match to entry PF01209 Ubie_methyltran, FT ubiE/COQ5 methyltransferase family, score -111.70, E-value FT 0.00084" FT CDS 38060..40345 FT /transl_table=11 FT /gene="STY2506" FT /gene_synonym="nrdA" FT /product="ribonucleoside-diphosphate reductase 1 alpha FT chain" FT /EC_number="1.17.4.1" FT /note="Similar to Salmonella typhimurium FT ribonucleoside-diphosphate reductase 1 alpha chain nrdA FT SW:RIR1_SALTY (P37426) (761 aa) fasta scores: E(): 0, 99.6% FT id in 761 aa" FT /note="Orthologue of E. coli nrdA (RIR1_ECOLI); Fasta hit FT to RIR1_ECOLI (761 aa), 96% identity in 761 aa overlap" FT /db_xref="GOA:Q8Z559" FT /db_xref="HSSP:5R1R" FT /db_xref="InterPro:IPR013509" FT /db_xref="UniProtKB/TrEMBL:Q8Z559" FT /protein_id="CAD07509.1" FT /translation="MNQSLLVTKRDGRTERINLDKIHRVLDWAAEGLNNVSVSQVELRS FT HIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAFGQFEPPALYH FT HVVKMVELGKYDNHLLEDYTEEEFKQMDSFIVHDRDMTFSYAAVKQLEGKYLVQNRVTG FT EIYESAQFLYILVVACLFSNYPRETRLDYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF FT SSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPF FT YKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGIQIN FT KLMYTRLLKGGDITLFSPSDVPGLYDAFFADQDEFERLYVKYENDDSIRKQRVKAVELF FT SLMMQERASTGRIYIQNVDHCNTHSPFDPVVAPVRQSNLCLEIALPTKPLNDVNDENGE FT IALCTLSAFNLGAIKTLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGV FT INFAYWLAKNGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKG FT ILPIDTYKKDLDAIVNEPLHYDWEQLRESIKTHGLRNSTLSALMPSETSSQISNATNGI FT EPPRGYVSIKASKDGILRQVVPDYEHLKDAYELLWEMPNNDGYLQLVGIMQKFIDQSIS FT ANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLAPSIQDDG FT CESGACKI" FT misc_feature 38456..40252 FT /note="Pfam match to entry PF00317 ribonucleo_red, FT Ribonucleotide reductase, score 1004.90, E-value 0" FT misc_feature 38564..38596 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT misc_feature 39854..39922 FT /note="PS00089 Ribonucleotide reductase large subunit FT signature" FT CDS 40458..41588 FT /transl_table=11 FT /gene="STY2507" FT /gene_synonym="nrdB" FT /product="ribonucleoside-diphosphate reductase 1 beta FT chain" FT /EC_number="1.17.4.1" FT /note="Similar to Salmonella typhimurium FT ribonucleoside-diphosphate reductase 1 beta chain nrdB FT SW:RIR2_SALTY (P37427) (375 aa) fasta scores: E(): 0, 99.7% FT id in 375 aa" FT /note="Orthologue of E. coli nrdB (RIR2_ECOLI); Fasta hit FT to RIR2_ECOLI (375 aa), 98% identity in 375 aa overlap" FT /db_xref="GOA:Q8Z558" FT /db_xref="HSSP:5R1R" FT /db_xref="InterPro:IPR012348" FT /db_xref="UniProtKB/TrEMBL:Q8Z558" FT /protein_id="CAD07510.1" FT /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQL FT SFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPE FT LETWVETWAFSETIHSRSYTHIIRNIVNDPAIVFDDIVTNEQIQKRAEGISAYYDELIE FT MTSYWHLLGEGTHTVNGKTVVVNLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER FT ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAA FT QQEKEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL FT VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL" FT misc_feature 40602..41528 FT /note="Pfam match to entry PF00268 ribonuc_red, FT Ribonucleotide reductases, score 547.90, E-value 1.6e-187" FT misc_feature 40800..40850 FT /note="PS00368 Ribonucleotide reductase small subunit FT signature" FT CDS 41588..41842 FT /transl_table=11 FT /gene="STY2508" FT /gene_synonym="yfaE" FT /product="putative ferredoxin" FT /note="Similar to Neisseria meningitidis (serogroup A and FT B) putative iron-sulphur binding protein NMA1497 or NMB1287 FT TR:Q9JQU8 (EMBL:AL162756) (96 aa) fasta scores: E(): FT 5.7e-11, 50.0% id in 66 aa. Similar to the N-termini of FT some oxidoreductases e.g. Yersinia pseudotuberculosis FT CDP-6-deoxy-delta-3,4-glucoseen reductase ascD or rfbI FT SW:ASCD_YERPS (P37911) (328 aa) fasta scores: E(): 5.8e-07, FT 38.4% id in 86 aa. Also similar to plant ferredoxins e.g. FT Phytolacca esculenta ferredoxin i SW:FER1_PHYES (P00230) FT (96 aa) fasta scores: E(): 3.7e-05, 38.6% id in 88 aa" FT /note="Orthologue of E. coli yfaE (YFAE_ECOLI); Fasta hit FT to YFAE_ECOLI (84 aa), 96% identity in 84 aa overlap" FT /db_xref="GOA:Q8XH23" FT /db_xref="HSSP:1FXI" FT /db_xref="InterPro:IPR012675" FT /db_xref="UniProtKB/TrEMBL:Q8XH23" FT /protein_id="CAD07511.1" FT /translation="MGRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGSC FT RTRLVAGQVDWITEPLAFIQPGEILPCCCRAKGDIEIEM" FT misc_feature 41597..41821 FT /note="Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur FT cluster binding domains, score 45.60, E-value 1.1e-09" FT misc_feature 41696..41722 FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature" FT CDS complement(41844..43034) FT /transl_table=11 FT /gene="STY2509" FT /product="putative transmembrane transport protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT ywoG TR:P94577 (EMBL:Z82987) (396 aa) fasta scores: E(): 0, FT 37.5% id in 381 aa. Similar to Staphylococcus aureus FT quinolone resistance protein norA SW:NORA_STAAU (P21191) FT (388 aa) fasta scores: E(): 1.9e-14, 25.1% id in 394 aa and FT Bacillus subtilis multidrug resistance protein 1 bmr or FT bmr1 SW:BMR1_BACSU (P33449) (389 aa) fasta scores: E(): FT 4.7e-14, 23.5% id in 371 aa. Contains hydrophobic, probable FT membrane-spanning regions" FT /db_xref="GOA:Q7AMM5" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7AMM5" FT /protein_id="CAD07512.1" FT /translation="MKEKLWTKDFWAITIVSFIIFFVFYVLLTLLPIYIADRLHASADK FT AGLLVTCFLAAAIVIRPFAGQWVGKYSNKKILVLSSLAFLVITALYPVCHSIESLLFIR FT VLHGITFGVITTVKGTISARLIPASRRGEGISFFSLAMGLAMVVGPWIGLNMARWDAFT FT AAFWLCSAVAALGIVLSLIVTVPPVIRHADGSKPNLGFSAMFDRAALPFALVTFFMTFS FT YAGVSAFLALYARELDLMAAASNFLLCYAILLMICRTFTGNICDKKGPKYVVYPCLLAF FT TIGLVALGYTNGSIMMIISGGLIGIGYGSVTPVFQTQIISSVEPHKIGVANSLFFNAMD FT AGMAIGAFIMGMMVESVGYRMIYVAGAVLVVLAGALYAVQMKKRGVMPLVSTSELH" FT misc_feature complement(41862..43013) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -100.20, E-value 0.0027" FT CDS 43196..44074 FT /transl_table=11 FT /gene="STY2510" FT /product="putative transcriptional regulator" FT /note="Similar to transcriptional regulators e.g. Bacillus FT subtilis hypothetical transcriptional regulator YvbU yvbU FT SW:YVBU_BACSU (O32255) (292 aa) fasta scores: E(): 8.9e-30, FT 34.2% id in 269 aa and Bacillus subtilis transcriptional FT regulatory protein GltC gltC SW:GLTC_BACSU (P20668) (300 FT aa) fasta scores: E(): 8.2e-19, 29.6% id in 274 aa" FT /db_xref="GOA:Q8Z557" FT /db_xref="InterPro:IPR020093" FT /db_xref="UniProtKB/TrEMBL:Q8Z557" FT /protein_id="CAD07513.1" FT /translation="MTLTQIHALLAVLEYGGFTEASKRLYMTQSAVSQAISALEEELGV FT DILIRERRKEIELTAAGSRIVRHLRAIQRDVNAVKEIVEQEKKNPARTLRIGCFPSACA FT CILPGVIRYFESHHPNVKIIPYEENSTAIIDSLQDGSIDAGFVPFPVNGMYCVPIYRDK FT FTVVVPENHPLAANSTVTVEELMDEPLIVSKGRYELSIMALFKEKGIEPIFKYEFNHPD FT TALNFIRQGLGIALLPELTLKATTGKLCSVALEPTFYRQISLLAKEPPVEGSPLFLLQK FT CMETLTDEGLL" FT misc_feature 43202..43633 FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 146.80, E-value 3.8e-40" FT misc_feature 43244..43336 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT CDS complement(44190..45260) FT /transl_table=11 FT /gene="STY2511" FT /gene_synonym="glpQ" FT /product="glycerophosphoryl diester phosphodiesterase FT periplasmic precursor" FT /EC_number="3.1.4.46" FT /note="Orthologue of E. coli glpQ (GLPQ_ECOLI); Fasta hit FT to GLPQ_ECOLI (358 aa), 89% identity in 357 aa overlap" FT /db_xref="GOA:Q8Z556" FT /db_xref="InterPro:IPR017946" FT /db_xref="UniProtKB/TrEMBL:Q8Z556" FT /protein_id="CAD07514.1" FT /translation="MKTTLKNLSVALMLAGMTIGSGAVAAEKVVIAHRGASGYLPEHTL FT PAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDF FT TLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRIHTFEEEIEFVQGLNHSTGKNI FT GIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYIGKQDNVYLQCFDVAELKRIKNELEPK FT MGMDLNLVQLIAYTDWNETQQKQPDGRWVNYNYDWMFKPGAMKQVAEYADGIGPDYHML FT VAEGSTKGNIKLTGMVQDAHQNKMVVHPYTVRADQLPDYATDVNQLYDILYNKAGVDGL FT FTDFPDKAVMFLQKND" FT misc_feature complement(44847..44870) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(45265..46623) FT /transl_table=11 FT /gene="STY2512" FT /gene_synonym="glpT" FT /product="glycerol-3-phosphate transporter" FT /note="Fasta hit to UHPT_ECOLI (463 aa), 33% identity in FT 452 aa overlap" FT /note="Fasta hit to UHPC_ECOLI (439 aa), 38% identity in FT 434 aa overlap" FT /note="Orthologue of E. coli glpT (GLPT_ECOLI); Fasta hit FT to GLPT_ECOLI (452 aa), 96% identity in 452 aa overlap" FT /db_xref="GOA:Q8Z555" FT /db_xref="HSSP:1PW4" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q8Z555" FT /protein_id="CAD07515.1" FT /translation="MLSIFKPALHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVR FT KNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA FT AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPSCGRTMVHWWSQKERGGIVSVWNC FT AHNVGGGIPPLLFLLGMAWFNDWKAALYMPAFGAIVVALFAFAMMRDTPQSCGLPPIEE FT YKNDYPDDYNEKAEEELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLK FT EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGASGVFFMTLVTIATIVYW FT MNPAGNPNVDMACMIIIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVA FT ASAIVGYTVDFFGWDGGFMVMIGGSILAVILLVVVMIGEKRHHDELQLKRNGG" FT RBS complement(45269..45273) FT /note="possible RBS" FT misc_feature complement(46117..46167) FT /note="PS00942 glpT family of transporters signature" FT RBS complement(46631..46635) FT /note="possible RBS" FT RBS 46844..46849 FT /note="possible RBS" FT CDS 46856..48484 FT /transl_table=11 FT /gene="STY2513" FT /gene_synonym="glpA" FT /product="anaerobic glycerol-3-phosphate dehydrogenase FT subunit A" FT /EC_number="1.1.99.5" FT /note="Orthologue of E. coli glpA (GLPA_ECOLI); Fasta hit FT to GLPA_ECOLI (542 aa), 93% identity in 542 aa overlap" FT /db_xref="GOA:Q8Z554" FT /db_xref="InterPro:IPR000447" FT /db_xref="UniProtKB/TrEMBL:Q8Z554" FT /protein_id="CAD07516.1" FT /translation="MKTRDSQASDVIIIGGGATGAGIARDCALRGLRVILVERHDIATG FT ATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTDGLFITLPEDGLAFQ FT ATFIRACEAAGIRAEAIDPQQARIIEPSVNPALIGAVKVPDGTVDPFRLTAANMLDARE FT HGAIVLTAHEVTGLIREGATVCGVHVRNHLTGETQTLHAPVVVNAAGIWGQRIAEYADL FT SIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSTHIDYNEIDSN FT RVTADEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLFDHAE FT RDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCITADTPLPGSKESTEHTLKR FT IISLPAPLRGSAVYRHGDRTPGWLSEGRQHRSLVCECEAVTAGEVQYAVENLTVNSLLD FT LRRRTRVGMGTCQGELCACRAAGLLQRFNVTTAAQSITQLSEFLNERWKGVQPVAWGDA FT LRESEFTRWVYQGLCGLEKEHQDEI" FT misc_feature 46871..48445 FT /note="Pfam match to entry PF01224 FAD_Gly3P_dh, FT FAD-dependent glycerol-3-phosphate dehydrogenase, score FT 881.80, E-value 2.2e-261" FT misc_feature 46895..46948 FT /note="PS00977 FAD-dependent glycerol-3-phosphate FT dehydrogenase signature 1" FT misc_feature 47909..47941 FT /note="PS00978 FAD-dependent glycerol-3-phosphate FT dehydrogenase signature 2" FT RBS 48461..48466 FT /note="possible RBS" FT CDS 48474..49733 FT /transl_table=11 FT /gene="STY2514" FT /gene_synonym="glpB" FT /product="anaerobic glycerol-3-phosphate dehydrogenase FT subunit B" FT /EC_number="1.1.99.5" FT /note="Orthologue of E. coli glpB (GLPB_ECOLI); Fasta hit FT to GLPB_ECOLI (419 aa), 81% identity in 419 aa overlap" FT /db_xref="GOA:Q8Z553" FT /db_xref="InterPro:IPR003953" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z553" FT /protein_id="CAD07517.1" FT /translation="MKFDTVIMGGGLAGLLCGLQLQQHGLRCAIVTRGQSALHFSSGSL FT DLLSALPNGQPVTDITAGLDALRRQAPEHPYSRLGAQKVLTLAQQAQTLLNASGAQLYG FT DVQQAHQRVTPLGTLRSTWLSSPEVPVWPLSAQRICVVGVSGLLDFQAHLAAASLRQRD FT LNVETAEIDLPELDVLRDNPTEFRAVNIARLLDNEEKWQLLYDALSPIATNCDMIIMPA FT CFGLANDTLWRWLNERLPCALTLLPTLPPSVLGIRLHNQLQRQFVRQGGIWMPGDEVKK FT VTCRRGTVSEIWTRNHADIPLRPRFAVLASGSFFSSGLVAEREGIREPILGLDVQQTAT FT RAEWYQQHFFDPQPWQQFGVVTDDAFRPSLAGNTVENLYAIGSVLAGFDPIAEGCGGGV FT CAVSALQAAHHIAERAGEQQ" FT RBS 49718..49722 FT /note="possible RBS" FT CDS 49730..50920 FT /transl_table=11 FT /gene="STY2515" FT /gene_synonym="glpC" FT /product="anaerobic glycerol-3-phosphate dehydrogenase FT subunit C" FT /note="Orthologue of E. coli glpC (GLPC_ECOLI); Fasta hit FT to GLPC_ECOLI (396 aa), 94% identity in 395 aa overlap" FT /db_xref="GOA:Q8Z552" FT /db_xref="HSSP:1JB0" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q8Z552" FT /protein_id="CAD07518.1" FT /translation="MSDTRFESCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKD FT GALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFILSHTDLMGSV FT STPFAPVVNTATALKPVRQLLDYALKIDHRRTLPKYSFGTFRRWYRSVAAQQAKYKDQV FT AFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAISN FT VESLREAIAVKGIPVIATSSTCTFALRDEYPEVLDVDNAGLREHIELATRWLWRKLDAG FT KTLPLNPLPLKVVYHTPCHMEKMGWTLYTLELLRQIPGLELTVLDSQCCGIAGTYGFKK FT ENYPTSQSIGAPLFRQIEESGADIVVTDCETCKWQIEMSTSKRCEYPITLLAKALG" FT misc_feature 49754..49789 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT misc_feature 49874..49945 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 13.90, E-value 0.018" FT misc_feature 49895..49930 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT CDS 51222..51425 FT /transl_table=11 FT /gene="STY2516" FT /product="putative membrane protein" FT /note="Unknown function. Contains hydrophobic, possible FT membrane-spanning region" FT /db_xref="UniProtKB/TrEMBL:Q8Z551" FT /protein_id="CAD07519.1" FT /translation="MNNNKIRSMPDLIYLPLTIIFLQIIIHDIIFVTFTYQETEQNEYM FT CKFTLPIEHTAISQFIFRRGER" FT CDS 51415..52368 FT /transl_table=11 FT /gene="STY2517" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli ElaD protein elaD FT SW:ELAD_ECOLI (Q47013; P76480) (402 aa) fasta scores: E(): FT 7.6e-14, 29.3% id in 341 aa" FT /db_xref="GOA:Q8Z550" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z550" FT /protein_id="CAD07520.1" FT /translation="MSDEALALLFSAVENGDQNCIDLLCNLALRNDNLGHRVEKFLFDL FT FSGKRSGSPDIDKKINQACLVLHQIANNDITKDNTEWKKLHAPSRLLYMAGSATTDLSK FT KIGIAHKIMGDQFAQTDQEQVGVENLWCSARMLSSDELAAATLGLVQESPLLSVNYPIG FT LIHPTTKENILRTQLLEKMAQSGLSENEVFLINTGDHWLICLFYKLAEKIKCLIFNTYH FT DLNENTKQEIIEAAKITGISENEDIDFIETNLQNNVPNGCGLFCYHTIQLLSNAGQNDP FT ATTLREFAENFLTLSVEEQTLFNTQTRRQIYEYSLQ" FT CDS complement(52461..52631) FT /pseudo FT /partial FT /transl_table=11 FT /gene="STY2518" FT /product="conserved hypothetical protein" FT /note="Similar to C-terminus of Escherichia coli CinA-like FT protein cinA SW:CINA_ECOLI (P77808) (400 aa) fasta scores: FT E(): 1.6e-22, 87.5% id in 56 aa. Seems to be a duplication FT of the C-terminus of the upstream gene STY2523" FT /db_xref="PSEUDO:CAD07521.1" FT CDS complement(52637..53440) FT /transl_table=11 FT /gene="STY2519" FT /product="putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid FT aldolase" FT /note="Similar to e.g. Salmonella dublin FT 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase hpaI FT SW:HPAI_SALDU (Q9RPV0) (263 aa) fasta scores: E(): 0, 56.3% FT id in 263 aa and Escherichia coli FT 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase hpcH or FT hpaI SW:HPAI_ECOLI (Q47098; Q46983) (262 aa) fasta scores: FT E(): 0, 56.4% id in 250 aa" FT /note="Fasta hit to YHAF_ECOLI (256 aa), 43% identity in FT 254 aa overlap" FT /note="Orthologue of E. coli P76469; Fasta hit to P76469 FT (267 aa), 87% identity in 267 aa overlap" FT /db_xref="GOA:Q8Z549" FT /db_xref="HSSP:1DXE" FT /db_xref="InterPro:IPR015813" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z549" FT /protein_id="CAD07522.1" FT /translation="MNALLSNPFKEGLRKRDTQIGLWLSSTTSYMAEIAATSGYDWLLI FT DGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQ FT ARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDA FT ILEVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIESCIYRIRAAGKAAGFLAVDPAM FT AQKCLAWGANFVAVGVDTMLYTEALDSRLAMFKSVQSVSTAKRSY" FT RBS complement(53446..53451) FT /note="possible RBS" FT CDS complement(53466..54755) FT /transl_table=11 FT /gene="STY2520" FT /product="putative transport protein" FT /note="Similar to e.g. Agrobacterium vitis putative FT tartrate transporter ttuB SW:TUB3_AGRVI (P70786) (449 aa) FT fasta scores: E(): 0, 40.9% id in 421 aa. Contains FT hydrophobic, probable membrane-spanning regions" FT /note="Orthologue of E. coli YFAV_ECOLI; Fasta hit to FT YFAV_ECOLI (429 aa), 92% identity in 429 aa overlap" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q8XFW1" FT /protein_id="CAD07523.1" FT /translation="MSITLLDGVVKKNRARLIPFMLALYVLAFLDRSNIGFAKETYQID FT TGLSNEAYALGAGIFFVVYAFLGVPANLLMRKFGARTWIGTTTLLWGFLSAAMAWADSE FT AKFLIIRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGAL FT LEMHGFMGHPGWFWMFVIEGLLAIGAGIFTFFWLDDTPQQARFLSLEEKNALIRQLASE FT EEKKVTSRLADALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVT FT AVPWVAALLGTWLIPRYSDRTGDRRNVAAVTLLAAGIGIGLSGLVSPVLAILALCVAAV FT GFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFASDAAGLL FT TLAGVAIIGSLIIFTLSVNRPVAQSGAAHH" FT RBS complement(54764..54767) FT /note="possible RBS" FT CDS complement(54811..56028) FT /transl_table=11 FT /gene="STY2521" FT /product="putative MR-MLE-family protein" FT /note="Shows weak similarity to mandelate racemase/muconate FT lactonizing enzyme-family proteins e.g. and Pseudomonas FT putida mandelate racemase mdlA SW:MANR_PSEPU (P11444) (359 FT aa) fasta scores: E(): 6.2e-12, 29.1% id in 247 aa" FT /note="Orthologue of E. coli YFAW_ECOLI; Fasta hit to FT YFAW_ECOLI (405 aa), 96% identity in 405 aa overlap" FT /db_xref="GOA:Q8Z548" FT /db_xref="InterPro:IPR001354" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z548" FT /protein_id="CAD07524.1" FT /translation="MENIMTLPKIKHVRAWFIGGATAEKGAGGGDYHDQGGNHWIDDHI FT ATPMSKYRDYEQSRQSFGINVLGTLIVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFI FT EGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGA FT VRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFW FT LMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEH FT HGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHAVI FT TFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRDCHL FT KRPYSH" FT misc_feature complement(54916..55857) FT /note="Pfam match to entry PF01188 MR_MLE, Mandelate FT racemase / muconate lactonizing enzyme family, score 36.00, FT E-value 2.2e-10" FT CDS complement(56030..56812) FT /transl_table=11 FT /gene="STY2522" FT /product="putative transcriptional regulator" FT /note="Similar to transcriptional regulators e.g. Erwinia FT chrysanthemi pectin degradation repressor protein KdgR kdgR FT SW:KDGR_ERWCH (P37728) (305 aa) fasta scores: E(): 6.2e-18, FT 29.6% id in 257 aa" FT /note="Fasta hit to KDGR_ECOLI (263 aa), 31% identity in FT 257 aa overlap" FT /note="Fasta hit to YJHI_ECOLI (262 aa), 32% identity in FT 251 aa overlap" FT /note="Orthologue of E. coli YFAX_ECOLI; Fasta hit to FT YFAX_ECOLI (260 aa), 87% identity in 260 aa overlap" FT /db_xref="GOA:Q8Z547" FT /db_xref="HSSP:1MKM" FT /db_xref="InterPro:IPR014757" FT /db_xref="UniProtKB/TrEMBL:Q8Z547" FT /protein_id="CAD07525.1" FT /translation="MLESSKVPALTRAIDILNLIARIGPCSAAIIIETLRIPKSTAYLL FT LNELKRQRFISLDHQENYCLWTKLVELSGHALSKMDLRELARPRLTQLMDEIGLLCHLG FT IIDHENAYYILKVESSSTISVRSHEGKSLSLYRSGIGKCLLAWQPAAVRKAIIEKMVWE FT RATLTTITEPQQLNDELERIRQRGWSFDNGEDYPDVRCVAAPVFNARNELTAAISLVGT FT RLQINEENLDYLAGKAIACAKDISRLLGWKSPFDSLAS" FT misc_feature complement(56069..56626) FT /note="Pfam match to entry PF01614 IclR, Bacterial FT transcriptional regulator, score 267.30, E-value 2e-76" FT misc_feature complement(56189..56254) FT /note="PS01051 Bacterial regulatory proteins, iclR family FT signature" FT RBS complement(56819..56822) FT /note="possible RBS" FT CDS complement(57062..58258) FT /transl_table=11 FT /gene="STY2523" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli P77808; Fasta hit to P77808 FT (400 aa), 88% identity in 397 aa overlap" FT /db_xref="GOA:Q8Z546" FT /db_xref="InterPro:IPR008135" FT /db_xref="UniProtKB/TrEMBL:Q8Z546" FT /protein_id="CAD07526.1" FT /translation="MLNVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGVPLSRRNTVGD FT NLDSLVAILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHQAWLTEMERYF FT QQRGRVMAPSNRKQAELPASAEFINNPVGTACGFALQLNRCLMFFTPGVPSEFKVMVEK FT EILPRLRARFSLPEPPLCLRLTTFGRSESDLAQRLDSLPLPPGVTMGYRSSMPIIELKL FT TGPATQREAMLALWPEVKRVAGQNLIFEGTENLPAQIARRLQERQLSLTLSEQYTSGLL FT ALQLSRAGAPVLASEVVPSQEETLAQTAHWTTERRSNHYAGLALAVSGLENEHLNFALA FT TPDGTYALRVRFSANRYSLAIRQEVCAMMALNMLRRWLNGEDITSEHGWIDVVESLTS" FT RBS complement(58265..58269) FT /note="possible RBS" FT CDS complement(58373..59020) FT /transl_table=11 FT /gene="STY2524" FT /product="conserved hypothetical protein" FT /note="Similar to part of Proteus mirabilis hypothetical FT protein TR:Q9K374 (EMBL:AJ400965) (110 aa) fasta scores: FT E(): 8.6e-16, 44.9% id in 107 aa" FT /note="Orthologue of E. coli YFAZ_ECOLI; Fasta hit to FT YFAZ_ECOLI (180 aa), 86% identity in 180 aa overlap" FT /db_xref="InterPro:IPR009998" FT /db_xref="UniProtKB/TrEMBL:Q8Z545" FT /protein_id="CAD07527.1" FT /translation="MFLEWFLSALIPQRLAVQFCRFGEFFFMCLLERVKMKKSILLGFA FT GMLFVSASAQAISISGQAGEDYTNIGVGFGTESTGLALSGNWMHNDDDGDAAGVGLGLN FT IPVGPLLATVGGKGIYTNPKDSDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGI FT ESYEEANAGARFTIMRPLSIEAGYRYLNLAGKDGNRDNAIADGPYVGVNASF" FT RBS 59180..59187 FT /note="possible RBS" FT CDS 59194..59619 FT /transl_table=11 FT /gene="STY2525" FT /product="conserved hypothetical protein" FT /note="Shows weak similarity to Streptomyces lipmanii FT putative NTP pyrophosphohydrolase pur7 TR:Q53738 FT (EMBL:X92429) (152 aa) fasta scores: E(): 8.7e-06, 32.1% id FT in 131 aa" FT /note="Orthologue of E. coli YFAO_ECOLI; Fasta hit to FT YFAO_ECOLI (141 aa), 87% identity in 141 aa overlap" FT /db_xref="GOA:Q8Z544" FT /db_xref="HSSP:1Q33" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z544" FT /protein_id="CAD07528.1" FT /translation="MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGER FT IEEALRREIREELGEQLILSDITPWTFRDDIRVKTYADGRQEEIYMIYLIFDCVSANRD FT ICINDEFQDYAWVKPEELALYDLNVATRHTLALKGLL" FT misc_feature 59284..59373 FT /note="Pfam match to entry PF00293 mutT, Bacterial mutT FT protein, score 23.30, E-value 3.8e-05" FT misc_feature 59305..59364 FT /note="PS00893 mutT domain signature" FT CDS complement(59664..60269) FT /transl_table=11 FT /gene="STY2526" FT /gene_synonym="ais" FT /product="Ais protein" FT /note="Orthologue of E. coli ais (AIS_ECOLI); Fasta hit to FT AIS_ECOLI (200 aa), 67% identity in 199 aa overlap. FT Contains probable N-terminal signal sequence" FT /db_xref="InterPro:IPR013078" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z543" FT /protein_id="CAD07529.1" FT /translation="MLAFTLRFIKNKRYFAILAGALVIIAGLASQHAWSGNGLPQINGK FT ALAALAKQHPVVVLFRHAERCDRSDNTCLSDSTGITVNGAQDARALGKAFSADIQNYNL FT YSSNTVRTIQSATWFSAGRSLTADKKMMDCGSGIYASINTLLKKSQNKNIVIFTHNHCL FT TYIAKNKRGVKFDPDYLNALVMYAENGKLFLDGEFVPG" FT RBS complement(60275..60278) FT /note="possible RBS" FT CDS 60544..61701 FT /transl_table=11 FT /gene="STY2527" FT /product="putative lipopolysaccharide biosynthesis protein" FT /note="Similar to proteins from lipopolysaccharide FT biosynthesis loci e.g. Shigella sonnei WbgX wbgX FT TR:AAG17424 (EMBL:AF285971) (384 aa) fasta scores: E(): 0, FT 42.1% id in 387 aa and Bordetella pertussis DNA for FT lipopolysaccharide biosynthesis locus bplF TR:Q45381 FT (EMBL:X90711) (395 aa) fasta scores: E(): 0, 41.9% id in FT 394 aa" FT /note="Fasta hit to RFFA_ECOLI (376 aa), 32% identity in FT 377 aa overlap" FT /note="Orthologue of E. coli YFBE_ECOLI; Fasta hit to FT YFBE_ECOLI (390 aa), 82% identity in 385 aa overlap" FT /db_xref="GOA:Q8Z542" FT /db_xref="HSSP:1MDZ" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z542" FT /protein_id="CAD07530.1" FT /translation="MAEGKMMSDFLPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELE FT AAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGATPV FT MVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGARYGIPVIEDAAH FT ATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAW FT DRQSGGRAPQAEVLAPGYKYNLPDFNAAIALAQLQKLDALNARRAAIAAQYHQAMADLP FT FQPLSLPPWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYR FT ERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQ" FT misc_feature 60589..61683 FT /note="Pfam match to entry PF01041 DegT_DnrJ_EryC1, FT DegT/DnrJ/EryC1/StrS family, score 613.10, E-value FT 1.6e-180" FT CDS 61704..62687 FT /transl_table=11 FT /gene="pmrF" FT /gene_synonym="STY2528" FT /product="putative lipopolysaccharide modification protein" FT /note="Similar to Salmonella typhimurium polymixin FT resistance protein PmrF pmrF TR:O52324 (EMBL:AF036677) (327 FT aa) fasta scores: E(): 0, 99.7% id in 327 aa. Contains FT hydrophobic, possible membrane-spanning regions" FT /note="Fasta hit to YFDH_ECOLI (306 aa), 33% identity in FT 309 aa overlap" FT /note="Orthologue of E. coli YFBF_ECOLI; Fasta hit to FT YFBF_ECOLI (322 aa), 88% identity in 318 aa overlap" FT /db_xref="GOA:Q8Z541" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z541" FT /protein_id="CAD07531.1" FT /translation="MFDAAPIKKVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILL FT IDDGSSDSSAELMVKASQEADSHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQ FT NPPEEIPRLVAKADEGFDVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKAMGDYGCML FT RAYRRPIIDTMLRCHERSTFIPILANIFARRATEIPVHHAEREFGDSKYSFMRLINLMY FT DLVTCLTTTPLRLLSLLGSVIAIGGFSLSVLLIVLRLALGPQWAAEGVFMLFAVLFTFI FT GAQFIGMGLLGEYIGRIYNDVRARPRYFVQQVIYPESTSFTEESHQ" FT misc_feature 61734..62228 FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferases, score 55.70, E-value 1e-12" FT RBS 62670..62673 FT /note="possible RBS" FT CDS 62684..64666 FT /transl_table=11 FT /gene="STY2529" FT /product="putative lipopolysaccharide modification protein" FT /note="Almost identical to Salmonella typhimurium FT hypothetical protein located within the putative PmrAB FT regulated operon confering polymyxin resistance via lipid A FT modification SW:YFBG_SALTY (O52325) (660 aa) fasta scores: FT E(): 0, 98.5% id in 660 aa. The C-terminal half is similar FT to e.g rabidopsis thaliana hypothetical protein t23g18.6 FT TR:Q9SGE0 (EMBL:AC011438) (389 aa) fasta scores: E(): FT 1.9e-26, 34.0% id in 359 aa. The N-terminal half is similar FT to Mycobacterium smegmatis ferric exochelin biosynthesis FT fxbA TR:Q50378 (EMBL:U10425) (360 aa) fasta scores: E(): FT 1.8e-23, 31.1% id in 251 aa and to formyl-transferases" FT /note="Orthologue of E. coli YFBG_ECOLI; Fasta hit to FT YFBG_ECOLI (660 aa), 80% identity in 660 aa overlap" FT /db_xref="GOA:Q8Z540" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z540" FT /protein_id="CAD07532.1" FT /translation="MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAENTFFGSV FT SRLAAGLGIPVYAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLH FT GSLLPAYRGRAPLNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHH FT KLCQAARQLLNSILPTMKCGNIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVR FT AVAAPWPGAFSYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQA FT GDGITVQGSQLAQTLGLVAGACLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLDEEN FT YEVYGMDIGSNAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT FT RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK FT PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLIL FT NLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQE FT LATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPS FT IAMRDTVEETLDFFLRSVDIAERAS" FT misc_feature 62942..63214 FT /note="Pfam match to entry PF00551 formyl_transf, Formyl FT transferase, score 63.40, E-value 4.2e-17" FT CDS 64663..65562 FT /transl_table=11 FT /gene="STY2530" FT /product="conserved hypothetical protein" FT /note="Identical to Salmonella typhimurium 14028s FT hypothetical protein located within the putative PmrAB FT regulated operon confering polymyxin resistance via lipid A FT modification TR:O52326 (EMBL:AF036677) (299 aa) fasta FT scores: E(): 0, 99.3% id in 299 aa and Salmonella typhi TY2 FT hypothetical protein TR:P81889 (EMBL:AF071082) (227 aa) FT fasta scores: E(): 0, 100.0% id in 227 aa" FT /note="Orthologue of E. coli P76472; Fasta hit to P76472 FT (296 aa), 74% identity in 294 aa overlap" FT /db_xref="GOA:Q8Z539" FT /db_xref="InterPro:IPR002509" FT /db_xref="UniProtKB/TrEMBL:Q8Z539" FT /protein_id="CAD07533.1" FT /translation="MTKVGLRIDVDTLRGTREGVPRLLATLHRHGVQASFFFSVGPDNM FT GRHLWRLIKPRFLWKMLRSNAASLYGWDILLAGTAWPGKNIGNANAGIIRETATYHETG FT LHAWDHHAWQTHSGHWSIRQLEEDIARGITALEAIIGKPVTCSAAAGWRADGRVVRAKE FT PFNLRYNSDCRGTTLFRPLLMPGQTGTPQIPVTLPTWDEVIGPAVQAQSFNTWIISRML FT QDKGTPVYTIHAEVEGIVHQPLFEDLLVRARDAGITFCPLGELLPASPESLPLGQIVRG FT HIPGREGWLGCQQAVSAS" FT CDS 65559..67205 FT /transl_table=11 FT /gene="pqaB" FT /gene_synonym="STY2531" FT /product="melittin resistance protein PqaB" FT /note=" Identical to Salmonella typhi TY2 melittin FT resistance protein PqaB TR:P81890 (EMBL:AF071082) (548 aa) FT fasta scores: E(): 0, 99.6% id in 548 aa and Salmonella FT typhimurium hypothetical protein located within the FT putative PmrAB regulated operon confering polymyxin FT resistance via lipid A modification TR:O52327 FT (EMBL:AF036677) (548 aa) fasta scores: E(): 0, 98.4% id in FT 548 aa" FT /note="Orthologue of E. coli P76473; Fasta hit to P76473 FT (550 aa), 71% identity in 550 aa overlap" FT /db_xref="GOA:Q8Z538" FT /db_xref="InterPro:IPR003342" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z538" FT /protein_id="CAD07534.1" FT /translation="MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREMLA FT SGDWIVPHFLGLRYFEKPIAGYWINSLGQWLFGATNFGVRAGAILTTLLAAALVAWLTF FT RLWRDKRTALLASVIFLSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRTGKI FT GMFLLLGATCGLGVLTKGFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFVVVLP FT WAIAIARREADFWHYFFWVEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLLPGALK FT LGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVKEGVAA FT LRVNGGINLVFGIIGIVAAFVVSSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSL FT CHSPKYLLPAFCPLGLALLFGFSVPDRVMESKQPQFFVEMTQAPLASSRYILADSVGVA FT AGLAWSLKRDDIMLYGHAGELRYGLSYPDVQNKFVKADDFNAWLNQHRQEGIITLVLSI FT DKDEDISALSLPPADNVDYQGRLVLIQYRPK" FT CDS 67202..67537 FT /transl_table=11 FT /gene="STY2532" FT /product="putative membrane protein" FT /note="Identical to Salmonella typhi TY2 hypothetical FT protein TR:P81891 (EMBL:AF071082) (111 aa) fasta scores: FT E(): 0, 99.1% id in 111 aa and Salmonella typhimurium FT 14028s hypothetical protein located within the putative FT PmrAB regulated operon confering polymyxin resistance via FT lipid A modification TR:O52328 (EMBL:AF036677) (111 aa) FT fasta scores: E(): 0, 97.3% id in 111 aa" FT /db_xref="GOA:P81891" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/Swiss-Prot:P81891" FT /protein_id="CAD07535.1" FT /translation="MIGIVLVLASLLSVGGQLCQKQATRPLTTGGRRRHLMLWLGLALI FT CMGAAMVLWLLVLQTLPVGIAYPMLSLNFVWVTLAAWKIWHEQVLPRHWLGVALIISGI FT IILGSAA" FT RBS 67524..67527 FT /note="possible RBS" FT CDS 67537..67914 FT /transl_table=11 FT /gene="STY2533" FT /product="putative membrane protein" FT /note="Similar to Salmonella typhimurium 14028s FT hypothetical protein located within the putative PmrAB FT regulated operon confering polymyxin resistance via lipid A FT modification TR:O52329 (EMBL:AF036677) (125 aa) fasta FT scores: E(): 0, 98.4% id in 125 aa, Escherichia coli ORF159 FT TR:Q47376 (EMBL:L35031) (159 aa) fasta scores: E(): FT 2.1e-28, 68.9% id in 122 aa and in part to Salmonella typhi FT TY2 hypothetical protein TR:P81892 (EMBL:AF071082) (57 aa) FT fasta scores: E(): 1.8e-16, 98.2% id in 57 aa. Contains FT hydrophobic, possible membrane-spanning regions" FT /db_xref="GOA:Q8Z537" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z537" FT /protein_id="CAD07536.1" FT /translation="MGVMWGLISVAIASLAQLSLGFAMMRLPSIAHPLAFISGLGAFNA FT ATLALFAGLAGYLVSVFCWQKTLHMLALSKAYALLSLSYVLVWVASMLLPGLQGAFSLK FT AMLGVLCIMAGVMLIFLPARS" FT CDS complement(67909..68166) FT /transl_table=11 FT /gene="pmrD" FT /gene_synonym="STY2534" FT /product="polymyxin B resistance protein" FT /note="Identical to Salmonella typhimurium polymyxin B FT resistance protein PmrD SW:PMRD_SALTY (P37589) (85 aa) FT fasta scores: E(): 0, 100.0% id in 84 aa" FT /note="Orthologue of E. coli pmrD (PMRD_ECOLI); Fasta hit FT to PMRD_ECOLI (88 aa), 60% identity in 79 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8Z536" FT /protein_id="CAD07537.1" FT /translation="MEWLVKKSHYVKKRACHVLVLCDSGGSLKMIAEANSMILLSPGDI FT LSPLQDAQYCINREKHQTLKIVDARCYSCDEWQRLTRKPL" FT CDS complement(68264..69631) FT /transl_table=11 FT /gene="menE" FT /gene_synonym="STY2535" FT /product="O-succinylbenzoic acid-CoA ligase" FT /EC_number="6.2.1.26" FT /note="Similar to Salmonella typhimurium LT2 FT O-succinylbenzoic acid-CoA ligase SW:MENE_SALTY (P37418) FT (228 aa) fasta scores: E(): 0, 98.7% id in 228 aa" FT /note="Orthologue of E. coli menE (MENE_ECOLI); Fasta hit FT to MENE_ECOLI (451 aa), 79% identity in 449 aa overlap" FT /db_xref="GOA:Q8Z535" FT /db_xref="InterPro:IPR010192" FT /db_xref="UniProtKB/TrEMBL:Q8Z535" FT /protein_id="CAD07538.1" FT /translation="MTFTDWPWRHWRQVRSQAPALRLNDEVLSWRALCERIDALAGGFA FT AQGVREGDGVLLRAGNQPRTLLAWLALMQCGARVLPVNPQLPQTLLEALVPKLTLRFAL FT TLEGENAFSGLTVLQLRKSTVAYAVAWQPQRLVSMTLTSGSTGLPKAAVHTCQAHLASA FT QGVLSLMPFGPQDDWLLSLPLFHVSGQGIMWRWLFAGARMTVRDKQPLEQMLAGCTHAS FT LVPTQLWRLLANRAAVTLKAVLLGGAVIPVELTDQASKQGIRCWCGYGLTEFASTVCAK FT EADGSDDVGAPLPGREIRIVDNEVWLRAASMAEGYWRDGKLIPLVNDEGWFATRDRGEL FT NHGRLTIAGRLDNLFFSGGEGIQPEEVERVINAHPLVQQAFVVPVEDKEFGHRPVAVVE FT YASQAGDVNLAEWVRDKLARFQQPVRWLTLPSELKNGGIKISRRALQQWVCKICKN" FT misc_feature complement(68486..69547) FT /note="Pfam match to entry PF00501 AMP-binding, AMP-binding FT enzyme, score -29.10, E-value 8.6e-14" FT misc_feature complement(69182..69217) FT /note="PS00455 Putative AMP-binding domain signature" FT CDS complement(69628..70590) FT /transl_table=11 FT /gene="menC" FT /gene_synonym="STY2536" FT /product="O-succinylbenzoate-CoA synthase" FT /note="Similar to Escherichia coli O-succinylbenzoate-CoA FT synthase menC SW:MENC_ECOLI (P29208) (320 aa) fasta scores: FT E(): 0, 88.4% id in 320 aa, and to Haemophilus influenzae FT O-succinylbenzoate-CoA synthase menc or hi0969 FT SW:MENC_HAEIN (P44961) (347 aa) fasta scores: E(): 0, 56.2% FT id in 317 aa" FT /note="Orthologue of E. coli menC (MENC_ECOLI); Fasta hit FT to MENC_ECOLI (320 aa), 88% identity in 320 aa overlap" FT /db_xref="GOA:P58485" FT /db_xref="HSSP:1FHU" FT /db_xref="InterPro:IPR010196" FT /db_xref="UniProtKB/Swiss-Prot:P58485" FT /protein_id="CAD07539.1" FT /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLRDGEREGWGEI FT SPLPGFSQETWEEAQTALLTWVNDWLQGSEGLPEMPSVAFGASCALAELTGVLPEAADY FT RAAPLCTGDPDDLVLRLADMPGEKIAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDAN FT RAWTPLKAQQFAKYVNPDYRARIAFLEEPCKTRDDSRAFARETGIAIAWDESLREADFT FT FEAEEGVRAVVIKPTLTGSLDKVREQVAAAHALGLTAVISSSIESSLGLTQLARIAAWL FT TPGTLPGLDTLHLMQAQQVRPWPGNALPCLKRDELERLL" FT CDS complement(70590..71447) FT /transl_table=11 FT /gene="menB" FT /gene_synonym="STY2537" FT /product="naphthoate synthase" FT /EC_number="4.1.3.36" FT /note="Fasta hit to PAAF_ECOLI (255 aa), 33% identity in FT 247 aa overlap" FT /note="Orthologue of E. coli menB (MENB_ECOLI); Fasta hit FT to MENB_ECOLI (285 aa), 97% identity in 285 aa overlap" FT /db_xref="GOA:Q8XFL0" FT /db_xref="HSSP:2DUB" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q8XFL0" FT /protein_id="CAD07540.1" FT /translation="MIYPDETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVR FT NAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVH FT HLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFD FT GGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREML FT QNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKF FT KRNP" FT misc_feature complement(70830..71345) FT /note="Pfam match to entry PF00378 ECH, Enoyl-CoA FT hydratase/isomerase family, score 255.20, E-value 8.7e-73" FT misc_feature complement(71019..71081) FT /note="PS00166 Enoyl-CoA hydratase/isomerase signature" FT RBS complement(71454..71458) FT /note="possible RBS" FT CDS complement(71462..72220) FT /transl_table=11 FT /gene="yfbB" FT /gene_synonym="STY2538" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical protein FT yfbB SW:YFBB_ECOLI (P37355) (241 aa) fasta scores: E(): FT 1.8e-22, 68.1% id in 91 aa." FT /db_xref="GOA:Q8Z534" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z534" FT /protein_id="CAD07541.1" FT /translation="MMLHAQHMPGQPGTPSLVFLHGFSGDCREWQPVGEQFHGCSRLNI FT DLPGHGGSAAIPVGGFADVIRLLRATLISYNILKFWLVGYSLGDRVQMIASCQGIPGLC FT GLVVEGGHPGLQNEQARAERRLSDGRWAERFRHEPLTEVFHDWYQQPVFASLTAQQRQA FT LTALRSQNNGETLAAMLEATSLAVQPDLREVLNALAFPFYYLCGERDSKFRALAQEVAA FT TCHVIRNAGHNAHRENPAGVVDSLAQILRL" FT CDS complement(72217..73887) FT /transl_table=11 FT /gene="menD" FT /gene_synonym="STY2540" FT /product="menaquinone biosynthesis protein" FT /EC_number="4.1.3.-" FT /EC_number="4.1.1.71" FT /note="Similar to Escherichia coli menaquinone biosynthesis FT protein MenD [includes: 2-succinyl-6-hydroxy- FT 2,4-cyclohexadiene-1-carboxylate synthase menD FT SW:MEND_ECOLI (P17109) (556 aa) fasta scores: E(): 0, 90.6% FT id in 556 aa, and to Haemophilus influenzae menaquinone FT biosynthesis protein mend [includes: 2-succinyl-6-hydroxy- FT 2,4-cyclohexadiene-1-carboxylate synthase mend or hi0283 FT SW:MEND_HAEIN (P44612) (568 aa) fasta scores: E(): 0, 47.7% FT id in 566 aa" FT /db_xref="GOA:Q8Z533" FT /db_xref="InterPro:IPR004433" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z533" FT /protein_id="CAD07542.1" FT /translation="MSVSAFNRRWAAVILEALTRHGVRHVCIAPGSRSTPLTLAAAENP FT AFIHHTHFDERGLGHLALGLAKVSQQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLT FT ADRPPELIDCGANQAIRQAGMFASHPSQTLSLPRPTQDIPARWLVSTIDNALAMLHAGA FT LHINCPFAEPLYGDMNDTGLVWQQRLGDWWQDEKPWLREARRLASDKQRDWFFWRQKRG FT VVVAGRMSAEEGKKVAQWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKAVTELQQAQI FT VVQLGSSLTGKRLLQWQATCVPEEYWVIDNIEGRLDPAHHRGRRLVAKIADWLELHPAE FT KRKPWCVEIPRLAELAWQRVVAQRDTFGEAQLAHRIRDYLPEQGQLFVGNSLVVRLIDA FT LSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASAKSTLAIVGDLSALYDLNALALLRQV FT SAPFVLIVVNNNGGQIFSLLPTPQSKRERFYLMPQNVHFDHAAAMFNLRYHRPENWEEL FT ESALAGAWRTPATTVIELVVNDTDGAQTLQQLLAQVSHL" FT CDS complement(73973..75268) FT /transl_table=11 FT /gene="menF" FT /gene_synonym="STY2541" FT /product="isochorismate synthase" FT /EC_number="5.4.99.6" FT /note="Orthologue of E. coli menF (MENF_ECOLI); Fasta hit FT to MENF_ECOLI (431 aa), 78% identity in 431 aa overlap" FT /db_xref="GOA:Q8Z532" FT /db_xref="HSSP:1K0G" FT /db_xref="InterPro:IPR005801" FT /db_xref="UniProtKB/TrEMBL:Q8Z532" FT /protein_id="CAD07543.1" FT /translation="MHSITTALENLTRQLSQEIPATPGLCVFDAPFPLNDAFDALSWLA FT SQSSFPQFYWQQRNGDEEAAVLGAITVFSSLDLAQRFLRQHAQPDLRIWGLNAFEPKEG FT YLLLPRLEWRRSGGTATLRLHLHSDVSLRDDARLAKAFLASLVGIKPVPALRLSLTSEQ FT HWPDKDGWVKLIQQATHTIAQEAFDKVVLARATDLQFSRPVNAAAMMASSRRLNLNCYH FT FFMAFSADTAFLGSSPERLWRRRETALRTEALAGTVANHPDNHKAWQLGEWLMKDDKNQ FT RENMLVVEDICQRLQNCTHSLDVLPPQVLRLRKVQHLRRCIWTALNQADDTLCLHQLQP FT TAAVAGIPREPARCFIEQHEPFEREWYAGSAGYLSTRQSEFCVTLRSAKVTANVVRLYA FT GAGIVRGSDPEQEWQEIDNKAAGLRTLLQMDA" FT misc_feature complement(73991..74770) FT /note="Pfam match to entry PF00425 chorismate_bind, FT chorismate binding enzyme, score 311.00, E-value 1.4e-89" FT RBS complement(75275..75279) FT /note="possible RBS" FT CDS complement(75369..75680) FT /transl_table=11 FT /gene="STY2542" FT /product="conserved hypothetical protein" FT /note="Fasta hit to YGAM_ECOLI (113 aa), 34% identity in 96 FT aa overlap" FT /note="Fasta hit to YQJD_ECOLI (101 aa), 42% identity in FT 101 aa overlap" FT /note="Orthologue of E. coli ELAB_ECOLI; Fasta hit to FT ELAB_ECOLI (101 aa), 89% identity in 101 aa overlap" FT /db_xref="InterPro:IPR010279" FT /db_xref="UniProtKB/TrEMBL:Q8XF60" FT /protein_id="CAD07544.1" FT /translation="MRMSYQFGESRVDDDLTLLSETLEEVLRSSGDPADQKYIELKARA FT EQALEEVKNRVSHASDSYYYRAKQAVYKADDYVHEKPWQGIGVGAAVGLVLGLLLARR" FT CDS complement(75729..76190) FT /transl_table=11 FT /gene="STY2543" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli ELAA_ECOLI; Fasta hit to FT ELAA_ECOLI (153 aa), 80% identity in 153 aa overlap" FT /db_xref="GOA:Q8XG97" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q8XG97" FT /protein_id="CAD07545.1" FT /translation="MIDWQDLHHSELTVPQLYALLKLRCAVFVVEQRCPYLDVDGDDLV FT GDNRHILGWHQDELVAYARILKSDNESDPVVIGRVIVSDAWRGAKLGQQLMAKTLESCG FT RHWPDKPLYLGAQAHLQPFYARFGFIPVTDVYDEDGIPHRGMAREVHQA" FT misc_feature complement(75801..76028) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 43.90, E-value FT 3.7e-09" FT RBS complement(76197..76201) FT /note="possible RBS" FT CDS 76251..77168 FT /transl_table=11 FT /gene="STY2544" FT /product="putative hydrolase" FT /note="Orthologue of E. coli ELAC_ECOLI; Fasta hit to FT ELAC_ECOLI (305 aa), 81% identity in 305 aa overlap" FT /db_xref="GOA:P60194" FT /db_xref="InterPro:IPR013469" FT /db_xref="UniProtKB/Swiss-Prot:P60194" FT /protein_id="CAD07546.1" FT /translation="MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQH FT QMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIATT FT LRLSGSWTDFPLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVEHDKPGALNARA FT LKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTAPCEAALAL FT AQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHISSRYDDKGCQ FT RLLAECRAIFPATELAYDFSVFPV" FT misc_feature 76299..76889 FT /note="Pfam match to entry PF00753 lactamase_B, FT Metallo-beta-lactamase superfamily, score 8.70, E-value FT 0.00054" FT misc_feature 76845..76868 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS 77225..77228 FT /note="possible RBS" FT CDS 77234..78238 FT /transl_table=11 FT /gene="STY2545" FT /product="putative receptor/regulator protein" FT /note="Shows weak similarity to Bacillus subtilis FT chemotaxis CheV protein cheV SW:CHEV_BACSU (P37599) (303 FT aa) fasta scores: E(): 2.7e-17, 31.4% id in 299 aa and e.g. FT Vibrio parahaemolyticus chemotaxis CheV homolog cheV FT TR:Q9X9K3 (EMBL:U12817) (308 aa) fasta scores: E(): FT 5.7e-26, 32.6% id in 322 aa" FT /db_xref="GOA:Q8Z531" FT /db_xref="InterPro:IPR002545" FT /db_xref="UniProtKB/TrEMBL:Q8Z531" FT /protein_id="CAD07547.1" FT /translation="MDNFQKDIDDRANLTLSNRFELLLFRLGTSLHEQKSELFGINVFK FT LREIIPMPAFTRPAGMKAPLLGMVNIRDQVIPVIDLPAVAGCKPETGLNILLITEYVRS FT VQAFAVESVENIMRLDWQQVHTAEKAVNGRYITSIACLDDNKETNNLALVLDVEQILYD FT IVPSSHDLRATNLKTNKFYITPGAVAIVAEDSKVACAMLEKGLNAMEIPHQMHVTGKDA FT WERIQQLAQEAEAEGKPISEKIALVLTDLEMPEMDGFTLTRKIKTDERLKKIPVVIHSS FT LSGSANEDHVRKVKADGYVAKFEINELSSVIQEVMERAAQNISGPLVSRQLLS" FT misc_feature 77288..77728 FT /note="Pfam match to entry PF01584 CheW, CheW-like domain, FT score 82.70, E-value 7.5e-21" FT misc_feature 77792..78169 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 15.70, E-value 0.00021" FT CDS complement(78379..79656) FT /transl_table=11 FT /gene="STY2546" FT /gene_synonym="nuoN" FT /product="NADH dehydrogenase I chain N" FT /EC_number="1.6.5.3" FT /note="Orthologue of E. coli nuoN (NUON_ECOLI); Fasta hit FT to NUON_ECOLI (425 aa), 95% identity in 425 aa overlap" FT /db_xref="GOA:Q8Z530" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z530" FT /protein_id="CAD07548.1" FT /translation="MDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNQEEF FT YLLVLIASLGGILLANANHLAALFLGIELISLPLFGLIGYAFRQKRSLEASIKYTILSA FT AASSFLLFGMALVYAQSGNLSFEALGKSLGDGMLHEPLLLAGFGLMIVGLGFKLSLVPF FT HLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAVRVVLGIIAFASII FT FGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQSGEMSMEAVGVYLAGYLFSSLGAF FT GVVSLMSSPFRGPDADSLYSYRGLFWHRPVLAAVMTVMMLSLAGIPMTLGFIGKFYVLA FT VGVQASLWWLVAAVVVGSAIGLYYYLRVAVSLYLHAPQQPGRDAPTNWQYSAGGIVVLI FT SALLVLVLGVWPQPLISLVQLATPLM" FT misc_feature complement(78571..79473) FT /note="Pfam match to entry PF00361 oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains, FT score 345.40, E-value 6.3e-100" FT CDS complement(79843..81372) FT /transl_table=11 FT /gene="STY2547" FT /gene_synonym="nuoM" FT /product="NADH dehydrogenase I chain M" FT /EC_number="1.6.5.3" FT /note="Orthologue of E. coli nuoM (NUOM_ECOLI); Fasta hit FT to NUOM_ECOLI (509 aa), 96% identity in 509 aa overlap" FT /db_xref="GOA:Q8Z529" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q8Z529" FT /protein_id="CAD07549.1" FT /translation="MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMELTLALGLQ FT LWLQGGYSLTQSAGIPQWQSEFVLPWIPRFGISIHLALDGLSLLMVVLTGLLGVLAVLC FT SWREIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASD FT GKTRITAATKFFIYTQASGLVMLIAILALVFVHYKATSVWTFNYEELLNTPMSHGVEYL FT LMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPN FT ASAEFAPIAMWLGVIGIFYGAWMAFTQYDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQG FT AVIQMIAHGLSAAGLFILCGQLYERLHTRDMRMMGGLWGKMKWLPALSMFFAVATLGMP FT GTGNFVGEFMILFGSYQVVPMITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELL FT GMSLRELFIILLLVVLLVLLGFYPQPILDTSHSAMSNIQQWFVNSVTTTRP" FT misc_feature complement(80053..80976) FT /note="Pfam match to entry PF00361 oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains, FT score 258.70, E-value 7.6e-74" FT CDS complement(81686..83527) FT /transl_table=11 FT /gene="STY2548" FT /gene_synonym="nuoL" FT /product="NADH dehydrogenase I chain L" FT /EC_number="1.6.5.3" FT /note="Fasta hit to HYFD_ECOLI (479 aa), 33% identity in FT 494 aa overlap" FT /note="Orthologue of E. coli nuoL (NUOL_ECOLI); Fasta hit FT to NUOL_ECOLI (613 aa), 95% identity in 613 aa overlap" FT /db_xref="GOA:Q8Z528" FT /db_xref="InterPro:IPR003916" FT /db_xref="UniProtKB/TrEMBL:Q8Z528" FT /protein_id="CAD07550.1" FT /translation="MNMLALTIILPLIGFVLLAFSRGRWSENLSATIGVGSVGLAALVT FT AFVGMDFFANGKQAFSQPLWTWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFAS FT WYMRGEEGYSRFFAYTNLFIASMVVLVLSDNLLLMYLGWEGVGLCSYLLIGFYYSDPKN FT GAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLML FT LGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILH FT LVGIIGAITLVMAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAF FT FKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYACFLVGGAALSALPLVTAGFFSK FT DEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAGKGITHHLPLI FT VLMILSTFVGALIVPPLQGVLPQTTELAHGRVLTLEITSGVVAIAGILIAAWLWLGKRT FT LVTSIANSAPGHLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLNALMNIPAILS FT RFAGKGLVLSENGYLRWYVASMSIGAVVVLALLMVLR" FT misc_feature complement(82250..83131) FT /note="Pfam match to entry PF00361 oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains, FT score 428.10, E-value 8.1e-125" FT misc_feature complement(83162..83347) FT /note="Pfam match to entry PF00662 oxidored_q1_N, FT NADH-Ubiquinone oxidoreductase (complex I), chain 5 FT N-terminus, score 105.80, E-value 8.4e-28" FT CDS complement(83524..83826) FT /transl_table=11 FT /gene="nuoK" FT /gene_synonym="STY2549" FT /product="NADH dehydrogenase I chain k" FT /EC_number="1.6.5.3" FT /note="Similar to Escherichia coli NADH dehydrogenase i FT chain k SW:NUOK_ECOLI (P33606) (100 aa) fasta scores: E(): FT 0, 99.0% id in 100 aa" FT /db_xref="GOA:Q8XFA3" FT /db_xref="InterPro:IPR017863" FT /db_xref="UniProtKB/TrEMBL:Q8XFA3" FT /protein_id="CAD07551.1" FT /translation="MIPLTHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALA FT FVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG" FT misc_feature complement(83527..83823) FT /note="Pfam match to entry PF00420 oxidored_q2, FT NADH-ubiquinone/plastoquinone oxidoreductase chain 4L, FT score 74.80, E-value 2.1e-19" FT CDS complement(83823..84377) FT /transl_table=11 FT /gene="STY2550" FT /gene_synonym="nuoJ" FT /product="NADH dehydrogenase I chain J" FT /EC_number="1.6.5.3" FT /note="Orthologue of E. coli nuoJ (NUOJ_ECOLI); Fasta hit FT to NUOJ_ECOLI (184 aa), 97% identity in 184 aa overlap" FT /db_xref="GOA:Q8XG37" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:Q8XG37" FT /protein_id="CAD07552.1" FT /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFS FT LGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAIML FT AVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREER FT AGEVLSNRADDRAKRKTEERA" FT RBS complement(83834..83838) FT /note="possible RBS" FT misc_feature complement(83898..84377) FT /note="Pfam match to entry PF00499 oxidored_q3, FT NADH-ubiquinone/plastoquinone oxidoreductase chain 6, score FT 61.10, E-value 2.4e-14" FT RBS complement(84384..84390) FT /note="possible RBS" FT CDS complement(84388..84930) FT /transl_table=11 FT /gene="nuoI" FT /gene_synonym="STY2551" FT /product="NADH dehydrogenase I chain I" FT /EC_number="1.6.5.3" FT /note="Similar to Escherichia coli NADH dehydrogenase i FT chain i SW:NUOI_ECOLI (P33604) (180 aa) fasta scores: E(): FT 0, 99.4% id in 180 aa" FT /db_xref="GOA:Q8XFD5" FT /db_xref="HSSP:1CLF" FT /db_xref="InterPro:IPR010226" FT /db_xref="UniProtKB/Swiss-Prot:Q8XFD5" FT /protein_id="CAD07553.1" FT /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYR FT GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGL FT CEEACPTTAIQLTPDFELGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDK FT GEAENEAKPIDVKSLLP" FT misc_feature complement(84586..84657) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 38.10, E-value 2.1e-07" FT misc_feature complement(84601..84636) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT misc_feature complement(84703..84774) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 21.90, E-value 0.001" FT misc_feature complement(84718..84753) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT CDS complement(84945..85922) FT /transl_table=11 FT /gene="STY2552" FT /gene_synonym="nuoH" FT /product="NADH dehydrogenase I chain H" FT /EC_number="1.6.5.3" FT /note="Similar to Salmonella typhimurium F98 NADH FT dehydrogenase I chain H SW:NUOH_SALTY (Q60010) (325 aa) FT fasta scores: E(): 0, 98.8% id in 325 aa" FT /note="Orthologue of E. coli nuoH (NUOH_ECOLI); Fasta hit FT to NUOH_ECOLI (325 aa), 95% identity in 325 aa overlap" FT /db_xref="GOA:Q8Z527" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z527" FT /protein_id="CAD07554.1" FT /translation="MSWITPDLIEILLSILKAVVILLVVVTCGAFMSFGERRLLGLFQN FT RYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVS FT PNWVVADLNIGILFSLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLS FT LMGVVAQAGSFNMTDIVNNQAHLWNVIPQFFGFVTFAIAGVAVCHRHPFDQPEAEQELA FT DGYHIEYSGMKFGLFFVGEYIGIVTVSALMVTLFFGGWHGPFLPPFVWFALKTAFFMMM FT FILIRASLPRPRYDQVMSFGWKVCLPLTLINLLVTAAVILWQAQ" FT misc_feature complement(84957..85892) FT /note="Pfam match to entry PF00146 NADHdh, NADH FT dehydrogenases, score 598.50, E-value 4e-176" FT misc_feature complement(85251..85292) FT /note="PS00668 Respiratory-chain NADH dehydrogenase subunit FT 1 signature 2" FT misc_feature complement(85710..85757) FT /note="PS00667 Respiratory-chain NADH dehydrogenase subunit FT 1 signature 1" FT CDS complement(85919..88651) FT /transl_table=11 FT /gene="nuoG" FT /gene_synonym="STY2553" FT /product="NADH dehydrogenase I chain G" FT /EC_number="1.6.5.3" FT /note="Similar to Salmonella typhimurium NADH dehydrogenase FT I chain G nuoG SW:NUOG_SALTY (P33900) (907 aa) fasta FT scores: E(): 0, 99.2% id in 907 aa" FT /note="Orthologue of E. coli nuoG (NUOG_ECOLI); Fasta hit FT to NUOG_ECOLI (907 aa), 95% identity in 907 aa overlap" FT /db_xref="GOA:P0A1Y5" FT /db_xref="InterPro:IPR019574" FT /db_xref="UniProtKB/Swiss-Prot:P0A1Y5" FT /protein_id="CAD07555.1" FT /translation="MLMATIHVDGKEYEVNGADNLLQACLSLGLDIPYFCWHPALGSVG FT ACRQCAVKQYQNAEDTRGRLVMSCMTPATDGTFISIDDEEAKQFRESVVEWLMTNHPHD FT CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYY FT KDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWD FT MQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRP FT RQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASIESNFALRELVGAENFY FT TGIARGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAV FT KGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQAR FT LGFAIAHALDNTAPAVDGIDSDLQNKIDVIVQALAGAKKPLIISGTNAGSSEVIQAAAN FT VAKALKGRGADVGITMIARSVNSMGLGMMGGGSLDDALGELETGSADAVVVLENDLHRH FT ASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNEGRAQRFFQV FT YDPAYYDNKTIMLESWRWLHSLHSTVENREVDWTQLDHVIDAVIAAMPQFAGIKDAAPD FT ATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDKDTMFAFSMEGNNQPTAPRSEI FT PFAWAPGWNSPQAWNKFQDEVGGKLRHGDPGVRLIEATEGGLDYFTTVPASFQAQDGQW FT RIAPYYHLFGSDELSQRSPVFQSRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTL FT PVEISEGLAAGQVGLPMGMPGIAPVLAGARLEDLREAQQ" FT RBS complement(85930..85934) FT /note="possible RBS" FT misc_feature complement(88166..88198) FT /note="PS00643 Respiratory-chain NADH dehydrogenase 75 Kd FT subunit signature 3" FT misc_feature complement(88301..88339) FT /note="PS00642 Respiratory-chain NADH dehydrogenase 75 Kd FT subunit signature 2" FT misc_feature complement(88427..88642) FT /note="Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur FT cluster binding domains, score 48.00, E-value 2.2e-10" FT misc_feature complement(88502..88555) FT /note="PS00641 Respiratory-chain NADH dehydrogenase 75 Kd FT subunit signature 1" FT misc_feature complement(88511..88543) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(88676..90013) FT /transl_table=11 FT /gene="STY2554" FT /gene_synonym="nuoF" FT /product="NADH dehydrogenase I chain F" FT /EC_number="1.6.5.3" FT /note="Similar to Salmonella typhimurium NADH dehydrogenase FT I chain F nuoF SW:NUOF_SALTY (P33901) (431 aa) fasta FT scores: E(): 0, 99.8% id in 400 aa" FT /note="Orthologue of E. coli nuoF (NUOF_ECOLI); Fasta hit FT to NUOF_ECOLI (445 aa), 99% identity in 445 aa overlap" FT /db_xref="GOA:Q8Z526" FT /db_xref="InterPro:IPR019575" FT /db_xref="UniProtKB/TrEMBL:Q8Z526" FT /protein_id="CAD07556.1" FT /translation="MKNVIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGL FT SPDEIVSQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL FT MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVHLRRAIAEATEAGLLGKNIMGT FT GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNNVETL FT CNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTIAREILEDYAGGM FT RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIGMVSLVR FT NLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA FT HAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW" FT misc_feature complement(88934..88969) FT /note="PS00645 Respiratory-chain NADH dehydrogenase 51 Kd FT subunit signature 2" FT misc_feature complement(89105..89965) FT /note="Pfam match to entry PF01512 Complex1_51K, FT Respiratory-chain NADH dehydrogenase 51 Kd subunit, score FT 613.40, E-value 1.3e-180" FT misc_feature complement(89447..89494) FT /note="PS00644 Respiratory-chain NADH dehydrogenase 51 Kd FT subunit signature 1" FT CDS complement(90010..90510) FT /transl_table=11 FT /gene="STY2555" FT /gene_synonym="nuoE" FT /product="NADH dehydrogenase I chain E" FT /EC_number="1.6.5.3" FT /note="Similar to Salmonella typhimurium NADH dehydrogenase FT I chain E nuoE SW:NUOE_SALTY (P33903) (166 aa) fasta FT scores: E(): 0, 100.0% id in 166 aa" FT /note="Orthologue of E. coli nuoE (NUOE_ECOLI); Fasta hit FT to NUOE_ECOLI (166 aa), 97% identity in 166 aa overlap" FT /db_xref="GOA:P0A1Y9" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/Swiss-Prot:P0A1Y9" FT /protein_id="CAD07557.1" FT /translation="MHENQQPQTEAFELSAAEREAIEHEKHHYEDPRAASIEALKIVQK FT QRGWVPDGAIYAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGYQG FT IQAALEKNLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHSHLTPEAIPELLE FT RYK" FT misc_feature complement(90013..90477) FT /note="Pfam match to entry PF01257 complex1_24kD, FT Respiratory-chain NADH dehydrogenase 24 Kd subunit, score FT 353.20, E-value 2.7e-102" FT RBS complement(90022..90025) FT /note="possible RBS" FT misc_feature complement(90088..90144) FT /note="PS01099 Respiratory-chain NADH dehydrogenase 24 Kd FT subunit signature" FT CDS complement(90513..92315) FT /transl_table=11 FT /gene="STY2556" FT /gene_synonym="nuoC" FT /product="NADH dehydrogenase I chain C; chain D" FT /EC_number="1.6.5.3" FT /note="Orthologue of E. coli P78089; Fasta hit to P78089 FT (600 aa), 95% identity in 600 aa overlap" FT /db_xref="GOA:P0A1Y7" FT /db_xref="InterPro:IPR014029" FT /db_xref="UniProtKB/Swiss-Prot:P0A1Y7" FT /protein_id="CAD07558.1" FT /translation="MVNNMTDLTAQDAAWSTRDHLDDPVIGELRNRFGPDAFTVQATRT FT GIPVVWVKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRDGLPAADFSVFYHLIS FT IERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGIDIEGHPHLTRIMMPQT FT WEGHPLRKDYPARATEFDPFELTKAKQDLEMEALTFKPEDWGMKRGTDNEDFMFLNLGP FT NHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGC FT VNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAF FT TDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLEWMPKRLDSYEKAAL FT RNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKWRPYSGYENFDFEVPVGG FT GVSDCYTRVMLKVEELRQSLRILQQCLDNMPEGPFKADHPLTTPPPKERTLQHIETLIT FT HFLQVSWGPVMPAQESFQMVEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPSAI FT RGSLVSDLIVYLGSIDFVMSDVDR" FT misc_feature complement(90516..91331) FT /note="Pfam match to entry PF00346 complex1_49Kd, FT Respiratory-chain NADH dehydrogenase, 49 Kd subunit, score FT 618.90, E-value 9.6e-223" FT misc_feature complement(91527..91562) FT /note="PS00535 Respiratory chain NADH dehydrogenase 49 Kd FT subunit signature" FT misc_feature complement(91794..91979) FT /note="Pfam match to entry PF00329 complex1_30Kd, FT Respiratory-chain NADH dehydrogenase, 30 Kd subunit, score FT 128.50, E-value 1.2e-34" FT CDS complement(92402..93064) FT /transl_table=11 FT /gene="STY2557" FT /gene_synonym="nuoB" FT /product="NADH dehydrogenase I chain B" FT /EC_number="1.6.5.3" FT /note="Orthologue of E. coli nuoB (NUOB_ECOLI); Fasta hit FT to NUOB_ECOLI (220 aa), 99% identity in 220 aa overlap" FT /db_xref="GOA:Q8XGN7" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/Swiss-Prot:Q8XGN7" FT /protein_id="CAD07559.1" FT /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLHDM FT VNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT FT KMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPE FT AYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQPERERKRGERIAVTNLRTPDEI" FT misc_feature complement(92546..92869) FT /note="Pfam match to entry PF01058 oxidored_q6, NADH FT ubiquinone oxidoreductase, 20 Kd subunit, score 199.60, FT E-value 4.8e-56" FT misc_feature complement(92585..92635) FT /note="PS01150 Respiratory-chain NADH dehydrogenase 20 Kd FT subunit signature" FT RBS complement(93072..93075) FT /note="possible RBS" FT CDS complement(93080..93523) FT /transl_table=11 FT /gene="STY2558" FT /gene_synonym="nuoA" FT /product="NADH dehydrogenase I chain A" FT /EC_number="1.6.5.3" FT /note="Orthologue of E. coli nuoA (NUOA_ECOLI); Fasta hit FT to NUOA_ECOLI (147 aa), 98% identity in 147 aa overlap" FT /db_xref="GOA:Q8XFY2" FT /db_xref="InterPro:IPR000440" FT /db_xref="UniProtKB/Swiss-Prot:Q8XFY2" FT /protein_id="CAD07560.1" FT /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARH FT KNVPFESGIDSVGTARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAA FT IFIFVLLAGLVYLARIGALDWTPARSRRERMNPETNSIANRQR" FT misc_feature complement(93149..93391) FT /note="Pfam match to entry PF00507 oxidored_q4, FT NADH-ubiquinone/plastoquinone oxidoreductase, chain 3, FT score 140.00, E-value 1e-41" FT misc_feature complement(93326..93373) FT /note="PS00012 Phosphopantetheine attachment site" FT CDS complement(93916..94068) FT /transl_table=11 FT /gene="STY2559" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8XGZ6" FT /protein_id="CAD07561.1" FT /translation="MPICTRLTAQIVKVAVNQPVAIRSSMWAKNNQNIHFMNLHVKKLE FT KLLLF" FT CDS complement(94148..95086) FT /transl_table=11 FT /gene="STY2560" FT /gene_synonym="lrhA" FT /product="NADH dehydrogenase operon transcriptional FT regulator" FT /note="Orthologue of E. coli lrhA (LRHA_ECOLI); Fasta hit FT to LRHA_ECOLI (312 aa), 85% identity in 312 aa overlap" FT /db_xref="GOA:Q8Z525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q8Z525" FT /protein_id="CAD07562.1" FT /translation="MINANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQ FT MQRLEQLVGKELFARHGRNKLLSEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIG FT ASDESADTILPFLLSRISSVYPKLALDVRVKRNAYMVDMVKSQEVDLVVTTNQPHSLDC FT LNLRTSPTHWYCAAEYVLQRGEPVPLVLLDDPSPFRDMVLETLNAAGIPWRLAYVASTL FT LAVRAAVKAGLGVTARPVEMMSPDLRVLGAADGLPPLLDTEYMLCRDPNSQNELAMVIF FT HAMESYQNPWHYNQFSAEGGDDPLMVEGGFE" FT misc_feature complement(94628..95050) FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 143.50, E-value 3.8e-39" FT misc_feature complement(94853..94885) FT /note="PS00639 Eukaryotic thiol (cysteine) proteases FT histidine active site" FT misc_feature complement(94916..95008) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT CDS 96018..97232 FT /transl_table=11 FT /gene="STY2561" FT /product="putative aminotransferase" FT /note="Similar to Methylobacillus flagellatum aspartate FT aminotransferase aat TR:Q9RAN0 (EMBL:L78665) (429 aa) fasta FT scores: E(): 0, 62.1% id in 404 aa and to many putative FT aminotransferases" FT /note="Orthologue of E. coli YFBQ_ECOLI; Fasta hit to FT YFBQ_ECOLI (405 aa), 97% identity in 404 aa overlap" FT /db_xref="GOA:Q8XGH1" FT /db_xref="HSSP:1DJU" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q8XGH1" FT /protein_id="CAD07563.1" FT /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAP FT FGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGV FT SELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRA FT KITPRTRGIVIINPNNPTGAVYSKELLMEIVNIAREHNLIIFADEIYDKILYDDAEHHS FT IAALAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVP FT AQHAIQTALGGYQSISEFILPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPRIDA FT KRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPREDDLEMAINRFGRFL FT SGYHQ" FT misc_feature 96024..97220 FT /note="Pfam match to entry PF00155 aminotran_1, FT Aminotransferases class-I, score 102.00, E-value 1.2e-26" FT CDS 97326..97925 FT /transl_table=11 FT /gene="STY2562" FT /product="putative oxetanocin A biosynthetic enzyme" FT /note="Shows weak similarity to Bacillus megaterium FT oxetanocin A biosynthetic enzyme oxsA TR:O24769 FT (EMBL:AB005787) (194 aa) fasta scores: E(): 1.6e-11, 30.0% FT id in 180 aa" FT /note="Orthologue of E. coli P76491; Fasta hit to P76491 FT (199 aa), 91% identity in 199 aa overlap" FT /db_xref="GOA:Q8Z524" FT /db_xref="InterPro:IPR006674" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z524" FT /protein_id="CAD07564.1" FT /translation="MKQSHFFAHLSRMKLINRWPLMRNVRTENVSEHSLQVAMVAHALA FT AIKNRKFGGQLNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKL FT VDMAPDELHDIFAPLIDENAWSKEEQAIVKQADALCAYLKCLEELSAGNNEFRLAKTRL FT EKTLELRRSQEMDYFMAVFVPSFHLSLDEISQDSPL" FT CDS complement(98017..99843) FT /transl_table=11 FT /gene="STY2563" FT /product="putative sodium/sulphate transporter" FT /note="Similar to e.g. Chlamydomonas reinhardtii putative FT sulphur deprivation response regulator sac1 SW:SAC1_CHLRE FT (Q39593) (585 aa) fasta scores: E(): 3.7e-24, 25.8% id in FT 597 aa. Mutants in sac1 are unable to synthesise FT arylsulphatase and are defficient in sulphate uptake FT compared to wild type. Contains hydrophobic, probable FT membrane-spanning regions" FT /note="Orthologue of E. coli YFBS_ECOLI; Fasta hit to FT YFBS_ECOLI (610 aa), 91% identity in 610 aa overlap" FT /db_xref="GOA:Q8Z523" FT /db_xref="InterPro:IPR006037" FT /db_xref="UniProtKB/TrEMBL:Q8Z523" FT /protein_id="CAD07565.1" FT /translation="MNGELIWVLSLLAIAVVLFATGKVRMDAVALFVIVAFVLSGTLTL FT SEAFSGFSDPNVILIAALFIIGDGLVRTGVATVVGTWLVKMAGSSEIKMLVLLMITVAG FT LGAFMSSTGVVAIFIPVVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNS FT ELLREGLHGFNFFSVTPLGVVVLALGIVYMLVMRFMLKGDAPGQQAGKRRTFRDLIREY FT RLTGRARRLAIRPGSPMVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRA FT RDVLLIDMSAAEVDLREFCAEQLLEPMVLRGEYFSDQALDVGMAEISLIPKSELIGKSV FT REIAFRTRYGLNVVGLKRDGVALEGSLADEPLLMGDIILVVGNWKLISLLGQKGRDFVV FT LNMPVEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPSAAIIACLLMGKFRCIDAES FT AYKAIHWPSIILIVGMMPFALALQKTGGVSLVVQGLMDIGGGYGPYMMLGCLFVLCAVI FT GLFISNTATAVLMAPIALAAAKSMGVSPYPFAMAVAMAASAAFMTPVSSPVNTLVLGPG FT NYSFSDFVKLGVPFTLIVMAVCIVMIPMLFPF" FT misc_feature complement(98020..98289) FT /note="Pfam match to entry PF00939 Na_sulph_symp, FT Sodium:sulfate symporter transmembrane region, score 21.90, FT E-value 1.4e-05" FT misc_feature complement(98128..98178) FT /note="PS01271 Sodium:sulfate symporter family signature" FT misc_feature complement(98650..98925) FT /note="Pfam match to entry PF02080 TrkA, Potassium channel, FT score 69.30, E-value 8.2e-17" FT misc_feature complement(98932..99207) FT /note="Pfam match to entry PF02080 TrkA, Potassium channel, FT score 64.00, E-value 3.2e-15" FT misc_feature complement(99622..99768) FT /note="Pfam match to entry PF00939 Na_sulph_symp, FT Sodium:sulfate symporter transmembrane region, score 25.00, FT E-value 1.9e-06" FT RBS complement(99850..99854) FT /note="possible RBS" FT CDS complement(99919..100596) FT /transl_table=11 FT /gene="STY2564" FT /product="putative phosphatase" FT /note="Similar to e.g. Saccharomyces cerevisiae GPP1 or FT RHR2 or YIL053W SW:GPP1_YEAST (P41277) (249 aa) fasta FT scores: E(): 3.9e-15, 34.2% id in 199 aa" FT /note="Fasta hit to GPH_ECOLI (252 aa), 31% identity in 203 FT aa overlap" FT /note="Orthologue of E. coli YFBT_ECOLI; Fasta hit to FT YFBT_ECOLI (222 aa), 87% identity in 221 aa overlap" FT /db_xref="GOA:Q8Z522" FT /db_xref="InterPro:IPR005833" FT /db_xref="UniProtKB/TrEMBL:Q8Z522" FT /protein_id="CAD07566.1" FT /translation="MPEEAHVQCKGFLFDLDGTLVDSLPAVERAWCSWADRFNLAHDEV FT LGFIHGKQAITSLRHFMAGKSEAEIAAEFTRLEQIEATETAGITALPGAVDLLNHLNKA FT GIPWAIVTSGSMPVARARHQVAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE FT CVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLADVDFALDSLTQLSVAKQPNGDVVVL FT RKT" FT misc_feature complement(100027..100572) FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 174.30, E-value 2e-48" FT CDS complement(100589..101083) FT /transl_table=11 FT /gene="STY2565" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical protein FT yfbU SW:YFBU_ECOLI (P76492) (164 aa) fasta scores: E(): 0, FT 95.7% id in 164 aa and Vibrio cholerae hypothetical protein FT VC1871 vc1871 TR:Q9KQX6 (EMBL:AE004263) (170 aa) fasta FT scores: E(): 0, 64.5% id in 166 aa. Shows weaker similarity FT to Methanococcus jannaschii hypothetical protein MJECS11 FT SW:YY11_METJA (Q60310) (195 aa) fasta scores: E(): 3.3e-13, FT 30.5% id in 177 aa" FT /db_xref="InterPro:IPR005587" FT /db_xref="UniProtKB/Swiss-Prot:P60816" FT /protein_id="CAD07567.1" FT /translation="MEMTNAQRLILSNQYKMMTMLDPTNAERYRRLQTIIERGYGLQMR FT ELDREFGELTEETCRTIIDIMEMYHALHVSWTNLKDTQAIDERRVTFLGFDAATEARYL FT GYVRFMVNIEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQIIN FT A" FT RBS complement(101090..101094) FT /note="possible RBS" FT CDS complement(101166..101621) FT /transl_table=11 FT /gene="STY2566" FT /product="conserved hypothetical protein" FT /note="Similar to Vibrio cholerae hypothetical protein FT VC1099 TR:Q9KT06 (EMBL:AE004191) (152 aa) fasta scores: FT E(): 1.1e-24, 46.6% id in 146 aa and Haemophilus influenzae FT hypothetical protein HIL205 SW:YC05_HAEIN (P44127) (147 aa) FT fasta scores: E(): 7.5e-22, 44.1% id in 145 aa" FT /note="Orthologue of E. coli P77496; Fasta hit to P77496 FT (151 aa), 95% identity in 151 aa overlap" FT /db_xref="GOA:Q8Z521" FT /db_xref="InterPro:IPR007334" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z521" FT /protein_id="CAD07568.1" FT /translation="MSTPDNRSVNFFSLFRRGQHYAKTWPMEKRLAPVFVENRVIRMTR FT YAIRFMPPVAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSLTPLPPSILN FT WFYEVRGKLQEAGQALAPVEGKPDYQALADTLKRAFKQLDKTFLDDL" FT RBS complement(101628..101631) FT /note="possible RBS" FT CDS 101961..103163 FT /transl_table=11 FT /gene="STY2567" FT /gene_synonym="ackA" FT /product="acetate kinase" FT /EC_number="2.7.2.1" FT /note="Fasta hit to TDCD_ECOLI (402 aa), 44% identity in FT 396 aa overlap" FT /note="Orthologue of E. coli ackA (ACKA_ECOLI); Fasta hit FT to ACKA_ECOLI (400 aa), 98% identity in 400 aa overlap" FT /db_xref="GOA:P63412" FT /db_xref="HSSP:1G99" FT /db_xref="InterPro:IPR004372" FT /db_xref="UniProtKB/Swiss-Prot:P63412" FT /protein_id="CAD07569.1" FT /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLAECFHLPEARIK FT WKMDGSKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSSVV FT IDESVIQGIKDSASFAPLHNPAHLIGIAEALKSFPQLKDKNVAVFDTAFHQTMPEESYL FT YALPYSLYKEHGVRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRN FT GKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDQINKMLTKESGLLGLTE FT VTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAM FT VRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIAQDASRLT FT A" FT misc_feature 101973..103139 FT /note="Pfam match to entry PF00871 Acetate_kinase, FT Acetokinase family, score 848.80, E-value 1.8e-251" FT misc_feature 101976..102011 FT /note="PS01075 Acetate and butyrate kinases family FT signature 1" FT misc_feature 102576..102629 FT /note="PS01076 Acetate and butyrate kinases family FT signature 2" FT RBS 103229..103232 FT /note="possible RBS" FT CDS 103240..105384 FT /transl_table=11 FT /gene="STY2568" FT /gene_synonym="pta" FT /product="phosphate acetyltransferase" FT /EC_number="2.3.1.8" FT /note="Orthologue of E. coli pta (PTA_ECOLI); Fasta hit to FT PTA_ECOLI (713 aa), 96% identity in 713 aa overlap" FT /db_xref="GOA:Q8Z520" FT /db_xref="InterPro:IPR016475" FT /db_xref="UniProtKB/TrEMBL:Q8Z520" FT /protein_id="CAD07570.1" FT /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRA FT GGDAPDQTTTIVRANSTLPAAEPLKMSHVESLLSSNQKDVLMEEIIANYHANTKDAEVV FT LVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLNERIELTRSSFGGAKN FT TNITGVIINKLNAPVDEQGRTRPDLSEIFDDSSKAQVIKIDPAKLQESSPLPVLGAVPW FT SFDLIATRAIDMARHLNATIINEGDIKTRRVKSVTFCARSIPHMLEHFRAGSLLVTSAD FT RPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSL FT SLQSFNLEVPVDDHERIEKVQEYVANYVNADWIESLTATSERSRRLSPPAFRYQLTELA FT RKAGKRVVLPEGDEPRTVKAAAICAERGIATCVLLGNPDEINRVAASQGVELGAGIEIV FT DPEVVRESYVARLVELRKSKGMTEPVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTA FT NTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSA FT IAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVA FT KSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGAL FT VDDIVYTIALTAIQASQQQQ" FT misc_feature 104407..105357 FT /note="Pfam match to entry PF01515 PTA_PTB, Phosphate FT acetyl/butaryl transferase, score 642.90, E-value 1.8e-189" FT CDS 105602..107122 FT /transl_table=11 FT /gene="STY2569" FT /product="putative membrane protein" FT /note="Similar to many e.g. Borrelia afzelii hypothetical FT protein TR:O51898 (EMBL:AF008219) (473 aa) fasta scores: FT E(): 0, 31.3% id in 502 aa and Haemophilus influenzae FT hypothetical protein HI0594 SW:YFCC_HAEIN (P44023) (509 aa) FT fasta scores: E(): 0, 28.8% id in 513 aa. Contains FT hydrophobic, probable membrane-spanning regions" FT /note="Orthologue of E. coli YFCC_ECOLI; Fasta hit to FT YFCC_ECOLI (506 aa), 92% identity in 506 aa overlap" FT /db_xref="GOA:Q8XGF4" FT /db_xref="InterPro:IPR018387" FT /db_xref="UniProtKB/TrEMBL:Q8XGF4" FT /protein_id="CAD07571.1" FT /translation="MSVVTESKTARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQE FT VQYQVDGQTKTRKVVDPHSFRIVTNEAGEAQYHRVQFFTTGDERPGLMNFPFEGLTSGS FT KFGTAVGIIMFMLVIGGAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSLGGA FT VFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAG FT VPVLSGSGLRIVVWIVATLIGLVFTLVYASRVKKNPLLSRVHESDRYFREQQDEVVQRP FT FTFGDWLVLLVLTGVMIWVVWGVIVHAWFIPEIASQFFTMGVVIGLIGVIFRLNGMTVN FT VMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGEPSVLNTLLNSIAHGISGLNNAI FT AAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIY FT PTSASLMATLGVCRVDFRNWLKVGASLLGLLFIMSSVVVIGAQMMGYH" FT misc_feature 106151..106198 FT /note="PS00012 Phosphopantetheine attachment site" FT CDS complement(107171..108124) FT /transl_table=11 FT /gene="STY2570" FT /product="putative transketolase C-terminal section" FT /note="Similar to the C-terminal halves of transketolases FT e.g. Mus musculus transketolase tkt SW:TKT_MOUSE (P40142) FT (623 aa) fasta scores: E(): 4e-27, 33.1% id in 311 aa and FT Escherichia coli 1-deoxyxylulose-5-phosphate synthase dxs FT SW:DXS_ECOLI (P77488) (619 aa) fasta scores: E(): 4e-19, FT 27.6% id in 308 aa" FT /db_xref="GOA:Q8Z519" FT /db_xref="InterPro:IPR015941" FT /db_xref="UniProtKB/TrEMBL:Q8Z519" FT /protein_id="CAD07572.1" FT /translation="MIKLAPAGLKDDIEMRKVYAGFVAGQIEAGSPIIALEADLMSSMA FT MDSVARDYPQHVINCGIMEANVIGTAAGLALTGRKPFVHTFTAFASRRCFDQLFMALDY FT QRNNVKVIASDAGVTACHNGGTHMSFEDMGIVRGLAHSVVLEVTDAVMFANILRQLMDL FT DGFYWLRTIRKQATSIYAPGSTFTIGKGNVLREGDDITLIANGIMVAEALEAARQLEQE FT GVSAAVIDMFTLKPIDRMLVKNYAEKTRRIVTCENHSIHNGLGSAVAEVLVENCPVPMR FT RVGVKERYGQVGTQDFLQQEYGLTAAAIVEAAKSLL" FT misc_feature complement(107399..107548) FT /note="Pfam match to entry PF00456 transketolase, FT Transketolase, score 20.60, E-value 0.00012" FT CDS complement(108117..108947) FT /transl_table=11 FT /gene="STY2571" FT /product="putative transketolase N-terminal section" FT /note="Similar to the N-terminal halves of transketolases FT e.g. Mus musculus transketolase tkt SW:TKT_MOUSE (P40142) FT (623 aa) fasta scores: E(): 5.6e-24, 33.0% id in 267 aa" FT /db_xref="HSSP:1QGD" FT /db_xref="InterPro:IPR005474" FT /db_xref="UniProtKB/TrEMBL:Q8Z518" FT /protein_id="CAD07573.1" FT /translation="MNVTEITQLARDIRVATLKSLNHLGFGHYGGSMSVVETLAVLYGA FT VMKIDPADPDWPERDYFVLSKGHAGPALYSTLAIKGYFPREELNTLNQNGTRLPSHPDR FT LKTHGVDATTGSLGQGISIAGGMALSHKLARRPNRVFCIVGDGELNEGQCWEAFQFIAH FT HRLNNLTVFIDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVVQPV FT PPADARPRVVILDSIKGQGVPCLEQLTNSHHLRLTDGMKQTLNEAIHQLEVMHD" FT RBS complement(108130..108135) FT /note="possible RBS" FT misc_feature complement(108303..108920) FT /note="Pfam match to entry PF00456 transketolase, FT Transketolase, score 129.40, E-value 6.8e-35" FT CDS complement(108944..110335) FT /transl_table=11 FT /gene="STY2572" FT /product="putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCJ21.17C TR:Q9S1Z0 (EMBL:AL109747) (516 FT aa) fasta scores: E(): 0, 47.3% id in 457 aa and FT Escherichia coli putative transport protein SgaT sgaT FT SW:SGAT_ECOLI (P39301) (484 aa) fasta scores: E(): 0, 27.6% FT id in 460 aa. Contains hydrophobic, probable FT membrane-spanning regions" FT /db_xref="GOA:Q8Z517" FT /db_xref="InterPro:IPR007333" FT /db_xref="UniProtKB/TrEMBL:Q8Z517" FT /protein_id="CAD07574.1" FT /translation="MFILETLNFVVDILKVPSVLVGLIALIGLVAQKKAFSDVVKGTIK FT TILGFIVLGGGATVLVGSLNPLGGMFEHAFNIQGIIPNNEAIVSIALEKYGASTALIMA FT FGMVANIVVARFTRLKYIFLTGHHTFYMACMIGVILTVAGFEGVGLVFTGSLILGLVMA FT FFPALAQRYMRRITGTDDIAFGHFGTLGYVLSGWIGSLCGKGSRSTEEMNLPKNLSFLR FT DSSISISLTMMIIYLIMAVSAGREYVEATFSGGQNYLVYAIIMAITFAAGVFIILQGVR FT LILAEIVPAFTGFSEKLVPNARPALDCPVVYPYAPNAVLIGFLFSFLGGLVGLFLLGQM FT KLVLILPGVVPHFFTGATAGVFGNATGGRRGAMIGAFANGLLITFLPVLLLPVLGAIGF FT ANTTFSDADFGVIGILLGNLARYLSPMAITGLVVALFALLVAYNVLAKSKKATAEVQEN FT SGAKE" FT RBS complement(110339..110344) FT /note="possible RBS" FT CDS complement(110356..110628) FT /transl_table=11 FT /gene="STY2573" FT /product="putative sugar phosphotransferase component II B" FT /note="Similar to Escherichia coli unknown pentitol FT phosphotransferase enzyme II, B component sgaB FT SW:PTXB_ECOLI (P39302) (101 aa) fasta scores: E(): 0.0058, FT 28.7% id in 87 aa, and to the C-termini of pts system FT proteins e.g. Escherichia coli pts system, mannitol cmtA FT SW:PTYC_ECOLI (P32059) (462 aa) fasta scores: E(): 0.061, FT 30.9% id in 81 aa" FT /db_xref="GOA:Q8XG32" FT /db_xref="InterPro:IPR013011" FT /db_xref="UniProtKB/TrEMBL:Q8XG32" FT /protein_id="CAD07575.1" FT /translation="MKIMAICGSGLGSSFMVEMNIKKVLKKLNIDAEVEHSDLSSATPG FT AADLFVMAKDIAASASVPESQLVVINNIIDINELETQLRAWFAKQ" FT CDS complement(110709..111152) FT /transl_table=11 FT /gene="STY2574" FT /product="putative sugar phosphotransferase component II A" FT /note="Fasta hit to PTYA_ECOLI (147 aa), 41% identity in FT 146 aa overlap" FT /note="Paralogue of E. coli ptxA (PTXA_ECOLI); Fasta hit to FT PTXA_ECOLI (154 aa), 40% identity in 140 aa overlap" FT /db_xref="GOA:Q8Z516" FT /db_xref="InterPro:IPR002178" FT /db_xref="UniProtKB/TrEMBL:Q8Z516" FT /protein_id="CAD07576.1" FT /translation="MLGTWLSDATITLRESVETWPQALEICGKPLLDAGVIAPEYITAI FT VQQHQKLGPYYVLAPGLAMPHARPEEGAKGLGLSLLKLQRGVSFGADEFDPVDIIIMLA FT APDKHSHIEMISALAELFSSDVDMEKLHQAKNLEDIKTIIDRF" FT misc_feature complement(110895..111086) FT /note="Pfam match to entry PF00359 PTS_EIIA_2, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 2, score 76.20, E-value 5.4e-20" FT CDS 111405..112424 FT /transl_table=11 FT /gene="STY2575" FT /product="putative transcriptional regulator" FT /note="Paralogue of E. coli gntR (GNTR_ECOLI); Fasta hit to FT GNTR_ECOLI (331 aa), 36% identity in 305 aa overlap" FT /db_xref="GOA:Q8Z515" FT /db_xref="HSSP:1LCC" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q8Z515" FT /protein_id="CAD07577.1" FT /translation="MSIPRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLRE FT KIEAAVHELGYMPNLAASALASASSHTIAMVVPNLAEAGCSEMFAGLQQILQPAGYQIM FT LAESQHRVEQEEKLLETLLASNIAAAILLSVEHSTTVRQWLKNASIPVMEMGAIRSDPI FT DMNIGIDNVAAMYELTEMLIQRGYQNIGLLCANQEQWIFQQHLHGWYKAMLRHHMSPNR FT VINAALPPNFSTGASQLPEFLLAWPELHALVCVSDELACGALYECQRRRIKVPYDLTVV FT GFGDSDVSRVCQPPLTTMAVPHRKIGSEAGRALLERLNQGNWSDRKSIASSLCMRESC" FT misc_feature 111435..111518 FT /note="Pfam match to entry PF00356 lacI, Bacterial FT regulatory proteins, lacI family, score 36.90, E-value FT 5.9e-09" FT misc_feature 111447..111503 FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature" FT misc_feature 111609..112334 FT /note="Pfam match to entry PF00532 Peripla_BP_like, FT Periplasmic binding proteins and sugar binding domain of FT the LacI family., score 84.60, E-value 2e-21" FT CDS complement(112430..112984) FT /transl_table=11 FT /gene="STY2576" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative NTP FT pyrophosphohydrolase SCI30A.07 TR:Q9S266 (EMBL:AL096811) FT (181 aa) fasta scores: E(): 3.3e-15, 37.5% id in 160 aa, FT and to Deinococcus radiodurans mutt/nudix family protein FT DR0079 TR:Q9RY71 (EMBL:AE001871) (171 aa) fasta scores: FT E(): 5.6e-09, 31.5% id in 146 aa" FT /note="Orthologue of E. coli P76494; Fasta hit to P76494 FT (180 aa), 93% identity in 180 aa overlap" FT /db_xref="GOA:P65560" FT /db_xref="InterPro:IPR000086" FT /db_xref="UniProtKB/Swiss-Prot:P65560" FT /protein_id="CAD07578.1" FT /translation="MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVV FT HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEH FT GLFYFEDQHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALA FT LWMTRNAKNEAALQEKPEETE" FT misc_feature complement(112460..112963) FT /note="Pfam match to entry PF01772 IPP_isomerase, FT Isopentenyl-diphosphate delta-isomerase, score -73.70, FT E-value 0.00074" FT RBS complement(112991..112999) FT /note="possible RBS" FT CDS complement(113041..113592) FT /transl_table=11 FT /gene="STY2577" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium histolyticum orf2dg TR:Q9X723 FT (EMBL:D87215) (180 aa) fasta scores: E(): 0, 50.6% id in FT 176 aa and Thermotoga maritima conserved hypothetical FT protein TM1101 TR:Q9X0I5 (EMBL:AE001769) (189 aa) fasta FT scores: E(): 2.1e-19, 38.6% id in 166 aa" FT /note="Orthologue of E. coli YFCE_ECOLI; Fasta hit to FT YFCE_ECOLI (184 aa), 85% identity in 182 aa overlap" FT /db_xref="GOA:Q8XGM7" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/TrEMBL:Q8XGM7" FT /protein_id="CAD07579.1" FT /translation="MKLMFASDIHGSLPATERVLERFAQSGARWLVILGDVLNHGPRNA FT LPEGYAPAQVAERLNAVATQIIAVRGNCDSEVDQMLLHFPITAPWQQILTQERRLFLTH FT GHLFGPTNLPALHTGDVLVYGHTHLPVAQQQEGLYHFNPGSVSIPKGGYAASYGILDDN FT VLSVIALNDQSIIAQVAINS" FT misc_feature complement(113056..113592) FT /note="Pfam match to entry PF01143 UPF0025, Uncharacterized FT protein family UPF0025, score 303.30, E-value 3e-87" FT misc_feature complement(113161..113235) FT /note="PS01269 Uncharacterized protein family UPF0025 FT signature" FT RBS complement(113599..113603) FT /note="possible RBS" FT CDS complement(113648..114292) FT /transl_table=11 FT /gene="STY2578" FT /product="putative glutathione-S transferase" FT /note="Similar to glutathione-S transferase-family proteins FT e.g. Dianthus caryophyllus glutathione S-transferase 1 gst1 FT or carsr8 SW:GTT1_DIACA (P28342) (221 aa) fasta scores: FT E(): 4e-07, 34.7% id in 196 aa" FT /note="Orthologue of E. coli YFCF_ECOLI; Fasta hit to FT YFCF_ECOLI (214 aa), 81% identity in 214 aa overlap" FT /db_xref="GOA:Q8Z514" FT /db_xref="InterPro:IPR017933" FT /db_xref="UniProtKB/TrEMBL:Q8Z514" FT /protein_id="CAD07580.1" FT /translation="MSKPVIVLWSDANFFSPYVLSAWVALQEKGLSFTLKTRDLDQGEH FT LQPGWRGYALTQRVPVLEADNFELSESSAIAEYLEERFAPPQWERIYPHDLQKRARARQ FT IQAWLRSDLLPLREERPTDVVFAGAKKAPLSEAGKASAAKLFATAEALLGQGTQNLFGE FT WCIADTDLALMINRLVLHGDDVPASLAAYATFQWQRASVQRFIALSSKRSG" FT misc_feature complement(113945..114247) FT /note="Pfam match to entry PF00043 GST, Glutathione FT S-transferases., score 46.70, E-value 3.6e-13" FT RBS complement(114298..114303) FT /note="possible RBS" FT RBS 114425..114429 FT /note="possible RBS" FT CDS 114435..115082 FT /transl_table=11 FT /gene="STY2579" FT /product="putative glutathione-S transferase" FT /note="Similar to Rhodococcus SPAD45 glutathione FT S-transferase isoJ TR:Q9RBP3 (EMBL:AJ249207) (233 aa) fasta FT scores: E(): 0, 49.8% id in 203 aa" FT /note="Orthologue of E. coli YFCG_ECOLI; Fasta hit to FT YFCG_ECOLI (215 aa), 83% identity in 208 aa overlap" FT /db_xref="GOA:Q8Z513" FT /db_xref="HSSP:1K0D" FT /db_xref="InterPro:IPR017933" FT /db_xref="UniProtKB/TrEMBL:Q8Z513" FT /protein_id="CAD07581.1" FT /translation="MIDLYYAPTPNGHKIMLFLEEAELAYRLLKVDISKGNQFRPDFLA FT ISPNNKIPAIVDHAPADGGQPLSLFESGEILLYLAEKSGKLLSGELRERHTTLQWLFWQ FT VGGLGPMLGQNHHFNHFAPQAIPYAIERYQVETQRLYNVLNKRLETSPWLGGDHYSIAD FT IASWPWVNAHQRQRIDLDTYPAVYNWFERIRTRPATARALLQAQLHCNSTKA" FT misc_feature 114438..115025 FT /note="Pfam match to entry PF00043 GST, Glutathione FT S-transferases., score 89.20, E-value 4.2e-26" FT RBS 115197..115202 FT /note="possible RBS" FT CDS 115206..116099 FT /transl_table=11 FT /gene="STY2580" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli YFCH_ECOLI; Fasta hit to FT YFCH_ECOLI (297 aa), 87% identity in 297 aa overlap" FT /db_xref="GOA:Q8Z512" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z512" FT /protein_id="CAD07582.1" FT /translation="MQILITGGTGLIGRHLIPRLLILGHQVTVVTRNPDNARQILDSRV FT TLWKGLAEREHLNEIDAIINLAGEPIADKRWTSQQKERLCQSRWAITQKLVDLIHASAT FT PPSVLISGSATGYYGDLGDVVVTEDEPPHNEFTHKLCARWEQIACRAQSDQTRVCLLRT FT GVVLAPQGGILGKMVPPFRLGLGGPVGNGRQYLAWIHIDDMVNGILWLLDNDLRGPFNM FT VSPYPVHNEQFAHALGRALRRPAIIRIPATAIRLLMGESSVLVLGGQRALPKRLEAAGF FT AFRWYDLEEALADVIR" FT CDS complement(116151..116927) FT /transl_table=11 FT /gene="STY2581" FT /gene_synonym="hisP" FT /product="histidine transport ATP-binding protein" FT /note="Similar to Salmonella typhimurium histidine FT transport ATP-binding protein HisP hisP SW:HISP_SALTY FT (P02915) (258 aa) fasta scores: E(): 0, 98.8% id in 258 aa" FT /note="Fasta hit to ARTP_ECOLI (242 aa), 44% identity in FT 238 aa overlap" FT /note="Fasta hit to FEPC_ECOLI (271 aa), 31% identity in FT 229 aa overlap" FT /note="Fasta hit to SSUB_ECOLI (255 aa), 36% identity in FT 219 aa overlap" FT /note="Fasta hit to YCFV_ECOLI (233 aa), 35% identity in FT 238 aa overlap" FT /note="Fasta hit to YBBA_ECOLI (228 aa), 36% identity in FT 239 aa overlap" FT /note="Fasta hit to FECE_ECOLI (255 aa), 31% identity in FT 238 aa overlap" FT /note="Fasta hit to PHNK_ECOLI (252 aa), 30% identity in FT 262 aa overlap" FT /note="Fasta hit to GLTL_ECOLI (241 aa), 49% identity in FT 243 aa overlap" FT /note="Fasta hit to TAUB_ECOLI (255 aa), 33% identity in FT 224 aa overlap" FT /note="Fasta hit to FTSE_ECOLI (222 aa), 35% identity in FT 215 aa overlap" FT /note="Fasta hit to PHNC_ECOLI (262 aa), 34% identity in FT 256 aa overlap" FT /note="Fasta hit to YECC_ECOLI (250 aa), 52% identity in FT 248 aa overlap" FT /note="Fasta hit to YRBF_ECOLI (269 aa), 31% identity in FT 253 aa overlap" FT /note="Fasta hit to NIKE_ECOLI (268 aa), 32% identity in FT 223 aa overlap" FT /note="Fasta hit to YABJ_ECOLI (232 aa), 31% identity in FT 245 aa overlap" FT /note="Fasta hit to GLNQ_ECOLI (240 aa), 54% identity in FT 245 aa overlap" FT /note="Fasta hit to YHDZ_ECOLI (252 aa), 48% identity in FT 243 aa overlap" FT /note="Fasta hit to PSTB_ECOLI (257 aa), 35% identity in FT 261 aa overlap" FT /note="Orthologue of E. coli hisP (HISP_ECOLI); Fasta hit FT to HISP_ECOLI (257 aa), 94% identity in 257 aa overlap" FT /db_xref="GOA:Q8Z511" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8Z511" FT /protein_id="CAD07583.1" FT /translation="MMSENKLHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGK FT STFLRCINFLEKSSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNL FT WNHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVS FT IARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSH FT VIFLHQGKIEEEGNPEQVFGNPQSPRLQQFLKGSLK" FT misc_feature complement(116241..116834) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 217.80, E-value 1.6e-61" FT misc_feature complement(116424..116468) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(116790..116813) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(116938..117645) FT /transl_table=11 FT /gene="STY2582" FT /gene_synonym="hisM" FT /product="histidine transport system permease" FT /note="Similar to Salmonella typhimurium histidine FT transport system permease protein HisM hisM SW:HISM_SALTY FT (P02912) (235 aa) fasta scores: E(): 0, 99.6% id in 235 aa" FT /note="Fasta hit to YECS_ECOLI (222 aa), 34% identity in FT 216 aa overlap" FT /note="Fasta hit to ARTM_ECOLI (222 aa), 32% identity in FT 211 aa overlap" FT /note="Fasta hit to HISQ_ECOLI (228 aa), 33% identity in FT 213 aa overlap" FT /note="Orthologue of E. coli hisM (HISM_ECOLI); Fasta hit FT to HISM_ECOLI (238 aa), 92% identity in 232 aa overlap" FT /db_xref="GOA:P0A2I8" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/Swiss-Prot:P0A2I8" FT /protein_id="CAD07584.1" FT /translation="MIEIIQEYWKSLLWTDGYRFTGVAITLWLLISSVVMGGLLAVILA FT VGRVSSNKFIRFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTDLLNAFFRSGLNC FT TVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAY FT SNEVILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFR FT RAERRWLQHVSSK" FT misc_feature complement(117055..117276) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 44.50, E-value 2.3e-09" FT misc_feature complement(117187..117273) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS complement(117642..118328) FT /transl_table=11 FT /gene="STY2583" FT /gene_synonym="hisQ" FT /product="histidine transport system permease protein" FT /note="Identical to Salmonella typhimurium histidine FT transport system permease protein HisQ hisQ SW:HISQ_SALTY FT (P02913) (228 aa) fasta scores: E(): 0, 100.0% id in 228 FT aa" FT /note="Fasta hit to ARTQ_ECOLI (238 aa), 34% identity in FT 219 aa overlap" FT /note="Fasta hit to YECS_ECOLI (222 aa), 31% identity in FT 199 aa overlap" FT /note="Fasta hit to POTB_ECOLI (275 aa), 30% identity in FT 220 aa overlap" FT /note="Orthologue of E. coli hisQ (HISQ_ECOLI); Fasta hit FT to HISQ_ECOLI (228 aa), 91% identity in 228 aa overlap" FT /db_xref="GOA:P0A2J0" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/Swiss-Prot:P0A2J0" FT /protein_id="CAD07585.1" FT /translation="MLYGFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVT FT GLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIY FT GAYFTETFRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILK FT ATALVSLLGLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVG FT VKRADL" FT RBS complement(117654..117659) FT /note="possible RBS" FT misc_feature complement(117762..117986) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 78.80, E-value 1.1e-19" FT misc_feature complement(117771..117794) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(117897..117983) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS complement(118511..119293) FT /transl_table=11 FT /gene="STY2584" FT /gene_synonym="hisJ" FT /product="histidine-binding periplasmic protein" FT /note="Similar to Salmonella typhimurium histidine-binding FT periplasmic protein precursor hisJ SW:HISJ_SALTY (P02910) FT (260 aa) fasta scores: E(): 0, 99.2% id in 260 aa" FT /note="Fasta hit to ARTI_ECOLI (243 aa), 39% identity in FT 255 aa overlap" FT /note="Fasta hit to ARGT_ECOLI (260 aa), 67% identity in FT 259 aa overlap" FT /note="Fasta hit to ARTJ_ECOLI (243 aa), 41% identity in FT 255 aa overlap" FT /note="Fasta hit to GLNH_ECOLI (248 aa), 30% identity in FT 257 aa overlap" FT /note="Orthologue of E. coli hisJ (HISJ_ECOLI); Fasta hit FT to HISJ_ECOLI (260 aa), 97% identity in 260 aa overlap" FT /db_xref="GOA:Q8Z510" FT /db_xref="HSSP:1HSL" FT /db_xref="InterPro:IPR018313" FT /db_xref="UniProtKB/TrEMBL:Q8Z510" FT /protein_id="CAD07586.1" FT /translation="MKKLALSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNAQ FT GELVGFDIDLAKELCNRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIA FT FTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQ FT GQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKDYKFGGPAVKDEKLFGVGTGMGLR FT KEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG" FT misc_feature complement(118535..119293) FT /note="Pfam match to entry PF00497 SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3, score FT 422.20, E-value 4.6e-123" FT misc_feature complement(119105..119146) FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature" FT RBS complement(119300..119303) FT /note="possible RBS" FT CDS complement(119531..120313) FT /transl_table=11 FT /gene="STY2585" FT /gene_synonym="argT" FT /product="lysine-arginine-ornithine-binding periplasmic FT protein precursor" FT /note="Similar to Salmonella typhimurium FT lysine-arginine-ornithine-binding periplasmic protein FT precursor argT SW:ARGT_SALTY (P02911) (260 aa) fasta FT scores: E(): 0, 99.2% id in 260 aa" FT /note="Fasta hit to HISJ_ECOLI (260 aa), 68% identity in FT 259 aa overlap" FT /note="Fasta hit to ARTI_ECOLI (243 aa), 34% identity in FT 255 aa overlap" FT /note="Fasta hit to ARTJ_ECOLI (243 aa), 36% identity in FT 254 aa overlap" FT /note="Fasta hit to GLNH_ECOLI (248 aa), 32% identity in FT 253 aa overlap" FT /note="Orthologue of E. coli argT (ARGT_ECOLI); Fasta hit FT to ARGT_ECOLI (260 aa), 92% identity in 260 aa overlap" FT /db_xref="GOA:Q8Z509" FT /db_xref="HSSP:1LST" FT /db_xref="InterPro:IPR018313" FT /db_xref="UniProtKB/TrEMBL:Q8Z509" FT /protein_id="CAD07587.1" FT /translation="MKKTVLALSLLIGLGATAASYAALPQTVRIGTDTTYAPFSSKDAK FT GDFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIA FT FSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYA FT NQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLR FT KDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD" FT misc_feature complement(119555..120313) FT /note="Pfam match to entry PF00497 SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3, score FT 406.10, E-value 3.3e-118" FT misc_feature complement(120125..120166) FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature" FT RBS complement(120321..120324) FT /note="possible RBS" FT CDS complement(120602..121171) FT /transl_table=11 FT /gene="STY2586" FT /gene_synonym="ubiX" FT /product="putative decarboxylase" FT /note="Similar to many putative decarboxylases and to FT Saccharomyces cerevisiae phenylacrylic acid decarboxylase FT pad1 or pof1 or ydr538W SW:PAD1_YEAST (P33751) (242 aa) FT fasta scores: E(): 2.8e-31, 48.4% id in 188 aa" FT /note="Orthologue of E. coli ubiX (UBIX_ECOLI); Fasta hit FT to UBIX_ECOLI (189 aa), 91% identity in 189 aa overlap" FT /db_xref="GOA:P0A246" FT /db_xref="InterPro:IPR004507" FT /db_xref="UniProtKB/Swiss-Prot:P0A246" FT /protein_id="CAD07588.1" FT /translation="MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTLA FT LETHFSLREVQALADVTHDARDIAASISSGSYPTAGMVILPCSIKTLSGIVHSYTDGLL FT TRAADVILKERRPLVLCVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLDDVI FT NQTVNRVLDQFDIPLPHDLFVRWQGA" FT RBS complement(121174..121180) FT /note="possible RBS" FT CDS complement(121315..122604) FT /transl_table=11 FT /gene="STY2587" FT /product="putative amino acid permease" FT /note="Similar to many e.g. Bacillus subtilis amino-acid FT permease RocE rocE SW:ROCE_BACSU (P39137) (467 aa) fasta FT scores: E(): 0, 39.5% id in 418 aa. Contains hydrophobic, FT probable membrane-spanning regions" FT /note="Fasta hit to CYCA_ECOLI (470 aa), 34% identity in FT 409 aa overlap" FT /note="Fasta hit to PHEP_ECOLI (458 aa), 33% identity in FT 423 aa overlap" FT /note="Fasta hit to LYSP_ECOLI (488 aa), 38% identity in FT 429 aa overlap" FT /note="Fasta hit to YIFK_ECOLI (461 aa), 34% identity in FT 424 aa overlap" FT /note="Fasta hit to PROY_ECOLI (457 aa), 35% identity in FT 405 aa overlap" FT /note="Fasta hit to GABP_ECOLI (466 aa), 35% identity in FT 431 aa overlap" FT /note="Fasta hit to ANSP_ECOLI (499 aa), 35% identity in FT 422 aa overlap" FT /note="Fasta hit to AROP_ECOLI (457 aa), 34% identity in FT 415 aa overlap" FT /note="Paralogue of E. coli ykfD (MMUP_ECOLI); Fasta hit to FT MMUP_ECOLI (475 aa), 38% identity in 434 aa overlap" FT /db_xref="GOA:Q8Z508" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:Q8Z508" FT /protein_id="CAD07589.1" FT /translation="MDTLQQSPPAEPEGGLRRNLKKRHLLMMSLGGTIGTGLFIGIAEP FT LSSVGPAGTLLAYLFAGTIMLATMMCLGELSCAFPHSGSFQHYALMFMPSPCWSYTIGW FT LYWFSWVFSLAADLTAAGFIAHQFFPAVPVYMFCLAILLILTAINLTSAKSFGECEYWL FT SAIKVFAIVLFICAGGVMIYSLMGHSDWHPTLKTDGMWFPHGWEQIVVCMTIVIYSFQG FT VELVGNAAGETESPHIILPKVILGIGLRIILFYGLAIAVLALVYPHELTPNGQSPFVWV FT FSHAGIPGADTLMTLVIFSAAVSAANSAIYASSRMLWSMAGDRFAPACFGKTNGGGVPV FT YAILITALLALVSLLTRYIPAQQFYLYLIASTGQVGCLAWITIGWCQYRFRQSVRNGTY FT ASDLLRYRSPLFPWTARFVIITNFAIMVGT" FT misc_feature complement(121321..122559) FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 343.30, E-value 2.6e-99" FT misc_feature complement(121606..121629) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS complement(122610..122613) FT /note="possible RBS" FT CDS complement(122668..123771) FT /transl_table=11 FT /gene="STY2588" FT /product="conserved hypothetical protein" FT /note="Similar to Thermotoga maritima hypothetical protein FT TM1597 TR:Q9X1T3 (EMBL:AE001804) (354 aa) fasta scores: FT E(): 8.4e-15, 34.5% id in 357 aa" FT /db_xref="InterPro:IPR001608" FT /db_xref="UniProtKB/TrEMBL:Q8Z507" FT /protein_id="CAD07590.1" FT /translation="MYMPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFDGCVETA FT QAVLNGGITVIAESRTYNLKKIRETGCTTCLLRSPCLSEIEDVVRYADISLNSEPVVLR FT ALSQEAQRQGKTHQVLLMVDMGDLREGIWFGEYQRILETVTLITGLPGLELYGLGTNFN FT CYGTVLPTVKNGEDFLALAARLEADSGIPVRRLSAGNCTSYHLLDKGIWPQGLNHLRIG FT GLHEFGIEYVDMKYLNEFHHSAKPVDKACSDMYILEAEIIELNSKPTVPVGELGVDAFL FT QSKTFVDRGIRRRALLAFGRQDVPSDNCVPCDDAITILGQTSDHTLVDIEDCRQSLKVG FT DVVRFELDYTGLLMACQTKGVAWRFTR" FT CDS complement(123773..125194) FT /transl_table=11 FT /gene="STY2589" FT /product="putative amino acid transporter" FT /note="Shows weak similarity to putative amino acid FT transporters e.g. Shigella flexneri amino acid antiporter FT xasA or gadC SW:XASA_SHIFL (Q54152) (511 aa) fasta scores: FT E(): 1.8e-29, 25.3% id in 467 aa. Contains hydrophobic, FT probable membrane-spanning regions" FT /db_xref="GOA:Q8Z506" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:Q8Z506" FT /protein_id="CAD07591.1" FT /translation="MSNTNSGLLGIKDIVFMNVIAILSLRQIPNVAPYGASAMLLWVIA FT AFCLFFPLAMVCGELSTGWPKDGGIFVWIKEAFGKRIAWIVVVCFLFSCVLFFPLMLQF FT GFTALGYMIGGGLAENKAFIGIGSAVIFWLLTLMNIRGMEWTKIINSISAWCGVFIPSA FT ILILLAVVWLCTGHQMQTDYTTAKNWIPDLGHWDTIVFLSSMMFAFAGLEVAPMIAGRT FT RNPQRDFPRAMAVSAAVIVGIYMVGTWALNTLLPAGKTDIVAGVMQAMHAAADTLHMPW FT LIPVMAICMFFGALGQINSWLVGPIYMLQEASREDNLLGDRIGKLHPVWKTPAFALTIQ FT AIIVTVLCFSTFISPSVAAAYWMLTALTTITYFIPYLVMFPAFWRLRKTQPDTPRSFKI FT PGKVLPAILPALGFLSIAFAVALLFIPPSQIDMGGYFQYAGKIIGGAVLAVVVAEYIYH FT RAQKRNARLSMAGGK" FT RBS complement(123780..123784) FT /note="possible RBS" FT misc_feature complement(123818..125092) FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score -206.40, E-value 5.2e-05" FT misc_feature complement(124913..124945) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS complement(125201..125205) FT /note="possible RBS" FT CDS complement(125285..126682) FT /transl_table=11 FT /gene="STY2590" FT /product="putative amino acid decarboxylase" FT /note="Similar to Bacillus methanolicus diaminopimelate FT decarboxylase lysA SW:DCDA_BACMT (P41023) (432 aa) fasta FT scores: E(): 4.8e-21, 28.3% id in 438 aa and to many FT putative diaminopimelate decarboxylases" FT /db_xref="GOA:Q8Z505" FT /db_xref="HSSP:1NJJ" FT /db_xref="InterPro:IPR000183" FT /db_xref="UniProtKB/TrEMBL:Q8Z505" FT /protein_id="CAD07592.1" FT /translation="MTDSIMQNYNQLREQVINGDRRFQHKDGHLCFEGVDLDALARQYP FT TPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY FT EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKV FT ANVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQ FT VPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAG FT ITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVEC FT HVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKG FT EEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYED FT MVKYDIY" FT misc_feature complement(125714..126541) FT /note="Pfam match to entry PF00278 Orn_DAP_Arg_deC, FT Pyridoxal-dependent decarboxylase, score 122.40, E-value FT 7.8e-36" FT RBS complement(126688..126691) FT /note="possible RBS" FT RBS 126880..126883 FT /note="possible RBS" FT CDS 126893..128320 FT /transl_table=11 FT /gene="STY2591" FT /product="putative transcriptional regulator" FT /note="Similar to many transcriptional regulators e.g. FT Bacillus subtilis arginine utilization regulatory protein FT RocR rocR SW:ROCR_BACSU (P38022) (461 aa) fasta scores: FT E(): 0, 36.1% id in 457 aa and Escherichia coli FT acetoacetate metabolism regulatory protein AtoC atoC FT SW:ATOC_ECOLI (Q06065) (461 aa) fasta scores: E(): 0, 40.6% FT id in 345 aa" FT /db_xref="GOA:Q8Z504" FT /db_xref="InterPro:IPR013656" FT /db_xref="UniProtKB/TrEMBL:Q8Z504" FT /protein_id="CAD07593.1" FT /translation="MASTNQELASALRMFSRFFDLIHQPLAVINERGEYVYYNQESADL FT DGYSIERAMGKHMLDVYPGMKETQSTMLSSLKKGVEYIGHYQIYYNARGQAVDYQHTTA FT SLYASDGGMVGVIEIGRNMSGVRRLQEQVVELNQLLYADHHEKHHAIITENPEMLSNIA FT KAKRLAASNIPVTIVGETGTGKELFSRLIHQCSKRANKPFIALNCGALPPTLIESTLFG FT TVRGAYTGAENSQGYLELANGGTLFLDELNAMPIEMQSKLLRFLQDKTFWRLGGQQQLH FT SDVRIVAAMNEAPVKLIQQERLRADLFYRLSVGMLTLPPLRARPEDIPLLANYFIDKYR FT NDVPQDIHGLSETARADLLNHAWPGNVRMLENAIVRSMIMQEKDGLLKHIIFEQDELNL FT GVPETAPENPLPSSPDPQYEGSLEVRVANYERHLIETALDTHQGNIAAAARSLNVSRTT FT LQYKVQKYAIRFGVVRN" FT misc_feature 126929..127081 FT /note="Pfam match to entry PF00989 PAS, PAS domain, score FT 23.70, E-value 6e-05" FT misc_feature 127343..128035 FT /note="Pfam match to entry PF00158 sigma54, Sigma-54 FT transcription factors, score 389.50, E-value 3.2e-113" FT misc_feature 127598..127645 FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature" FT CDS complement(128356..129873) FT /transl_table=11 FT /gene="STY2592" FT /gene_synonym="purF" FT /product="amidophosphoribosyltransferase" FT /EC_number="2.4.2.14" FT /note="Orthologue of E. coli purF (PUR1_ECOLI); Fasta hit FT to PUR1_ECOLI (504 aa), 96% identity in 504 aa overlap" FT /db_xref="GOA:Q8Z503" FT /db_xref="HSSP:1ECB" FT /db_xref="InterPro:IPR002375" FT /db_xref="UniProtKB/TrEMBL:Q8Z503" FT /protein_id="CAD07594.1" FT /translation="MCGIVGISGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRL FT RKANGLVNDIFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGN FT LTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDSFRHYPLEADNIFAAIAATNRQ FT IRGAYACVAMIIGHGMVAFRDPHGIRPLVLGKRDVGDGRTEYMVASESVALDTLGFEFL FT RDVAPGEAIYITEKGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGT FT KLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQ FT QLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPE FT IRFPNVYGIDMPTANELIAHGREVDEIRQIIGADGLIFQDLNDLIEAVRAENPDIQQFE FT CSVFNGVYVTKDVDQQYLDFLDSLRNDDAKAVLFQNEMENLEMHNEG" FT misc_feature complement(128575..129084) FT /note="Pfam match to entry PF00156 Pribosyltran, FT Phosphoribosyl transferase domain, score 37.30, E-value FT 3.5e-07" FT misc_feature complement(128749..128787) FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature" FT misc_feature complement(129292..129870) FT /note="Pfam match to entry PF00310 GATase_2, Glutamine FT amidotransferases class-II, score 352.40, E-value 1.4e-119" FT RBS complement(129884..129887) FT /note="possible RBS" FT CDS complement(129911..130399) FT /transl_table=11 FT /gene="STY2593" FT /gene_synonym="cvpA" FT /product="colicin V production protein (DedE protein)" FT /note="Orthologue of E. coli cvpA (CVPA_ECOLI); Fasta hit FT to CVPA_ECOLI (162 aa), 96% identity in 161 aa overlap" FT /db_xref="GOA:Q8XFT6" FT /db_xref="InterPro:IPR003825" FT /db_xref="UniProtKB/TrEMBL:Q8XFT6" FT /protein_id="CAD07595.1" FT /translation="MVWIDYAIIAVIAFSCLVSLIRGFVREALSLVTWGCAFFVASHYY FT TYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGICF FT GALRGALIVAAILFFLDTFTGLSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLPRT" FT misc_feature complement(130352..130384) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(130710..131384) FT /transl_table=11 FT /gene="STY2595" FT /gene_synonym="dedD" FT /product="DedD protein" FT /note="Orthologue of E. coli dedD (DEDD_ECOLI); Fasta hit FT to DEDD_ECOLI (211 aa), 82% identity in 217 aa overlap. FT Contains hydrophobic, possible membrane-spanning region FT near N-terminus" FT /db_xref="InterPro:IPR007730" FT /db_xref="UniProtKB/TrEMBL:Q8Z502" FT /protein_id="CAD07596.1" FT /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVP FT KPGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPSRMASNNVELDPIPVET FT PKPKPVEKPKPQPKPQQPVVAVSTPTPAPQPATDDKPAPTGKAYVVQLGALKNADKVNE FT IVGKLRSAGFRVYTSPSTPVQGKITRILVGPDASKDKMKGSLGELKQISGLSGVVMGYS FT PN" FT CDS complement(131374..132642) FT /transl_table=11 FT /gene="STY2596" FT /gene_synonym="folC" FT /product="folylpolyglutamate synthase" FT /EC_number="6.3.2.17" FT /EC_number="6.3.2.12" FT /note="Orthologue of E. coli folC (FOLC_ECOLI); Fasta hit FT to FOLC_ECOLI (422 aa), 87% identity in 422 aa overlap" FT /db_xref="GOA:Q8Z501" FT /db_xref="HSSP:1JBV" FT /db_xref="InterPro:IPR018109" FT /db_xref="UniProtKB/TrEMBL:Q8Z501" FT /protein_id="CAD07597.1" FT /translation="MKNKSIPQAASPLASWLSYLENLHSKSIDLGLERVSQVAARLDIL FT KPAPFVFTVAGTNGKGTTCRTLESVLIAAGYRVGVYSSPHLVRYTERVRVQGKELAESA FT HTASFAEIEAARGDISLTYFEYGTLSALWLFKQANLDVVILEVGLGGRLDATNIVDADV FT AVITSIALDHTDWLGPDRESIGREKAGIFRAEKPAIVGEPEMPATIADVAQETGALLLR FT RGVDWRYEVTATHWAFTDGDGTLAGLPLPQVPQPNAATALAALRASGLNIDEQAIRDGI FT AQATLPGRFQIVSESPRVIFDVAHNPHAAEYLTGRLKMLPKRGRVLAVIGMLHDKDIAG FT TLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGKGNVYDSVAQAWQAAIDAAQPEDTVL FT VCGSFHTVAHVMEVIDAGRIGGE" FT misc_feature complement(131722..132492) FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, score 104.40, E-value 2.2e-27" FT misc_feature complement(132166..132213) FT /note="PS01012 Folylpolyglutamate synthase signature 2" FT misc_feature complement(132418..132489) FT /note="PS01011 Folylpolyglutamate synthase signature 1" FT CDS complement(132710..133624) FT /transl_table=11 FT /gene="STY2597" FT /gene_synonym="accD" FT /product="acetyl-CoA carboxylase beta subunit" FT /EC_number="6.4.1.2" FT /note="Orthologue of E. coli accD (ACCD_ECOLI); Fasta hit FT to ACCD_ECOLI (304 aa), 98% identity in 304 aa overlap" FT /db_xref="GOA:Q8XFJ5" FT /db_xref="HSSP:1ON9" FT /db_xref="InterPro:IPR011762" FT /db_xref="UniProtKB/Swiss-Prot:Q8XFJ5" FT /protein_id="CAD07598.1" FT /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEV FT CPKCDHHMRMSARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGE FT KDALVVMKGTLHGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLVCFSASG FT GARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPK FT ALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLP FT APNPDAPREGVVVPPAPDQESEA" FT misc_feature complement(133010..133288) FT /note="Pfam match to entry PF01039 Carboxyl_trans, Carboxyl FT transferase domain, score 44.10, E-value 3.4e-11" FT CDS complement(133774..134433) FT /transl_table=11 FT /gene="STY2598" FT /gene_synonym="dedA" FT /product="DedA protein (dsg-1 protein)" FT /note="Fasta hit to YQJA_ECOLI (220 aa), 32% identity in FT 195 aa overlap" FT /note="Orthologue of E. coli dedA (DEDA_ECOLI); Fasta hit FT to DEDA_ECOLI (219 aa), 97% identity in 219 aa overlap" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:Q8XEL7" FT /protein_id="CAD07599.1" FT /translation="MDLIYFIIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVV FT TPFLPGDSLLFVAGALASLETNDLNVHVMVALMLIAAIVGDAVNYTIGRLFGEKLFSNP FT NSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIG FT ALLWVLLFTYAGYFFGTIPLIQDNLKLLIVGIIVVSILPGVIEIVRHKRAASRAAK" FT misc_feature complement(133852..134343) FT /note="Pfam match to entry PF00597 DedA, DedA family, score FT 224.30, E-value 1.8e-63" FT CDS complement(134482..135294) FT /transl_table=11 FT /gene="STY2599" FT /gene_synonym="truA" FT /product="tRNA pseudouridine synthase A" FT /EC_number="4.2.1.70" FT /note="Orthologue of E. coli truA (TRUA_ECOLI); Fasta hit FT to TRUA_ECOLI (270 aa), 97% identity in 270 aa overlap" FT /db_xref="GOA:Q8Z500" FT /db_xref="HSSP:1DJ0" FT /db_xref="InterPro:IPR020094" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z500" FT /protein_id="CAD07600.1" FT /translation="MSGQQSSPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQ FT VANEPINVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVP FT DDFHARFSATARRYRYIIYNHRLRPAVLAKGVTHYYEPLDAERMHRAAQCLLGENDFTS FT FRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLLEVGAHNQPES FT WIAELLAARDRTLAAATAKAEGLYLVAVDYPDRFDLPKPPMGPLFLAD" FT misc_feature complement(134599..135195) FT /note="Pfam match to entry PF01416 PseudoU_synth_1, tRNA FT pseudouridine synthase, score 373.20, E-value 2.7e-108" FT CDS complement(135294..136307) FT /transl_table=11 FT /gene="STY2600" FT /gene_synonym="usg" FT /product="putative semialdehyde dehydrogenase" FT /note="Orthologue of E. coli usg (USG_ECOLI); Fasta hit to FT USG_ECOLI (337 aa), 89% identity in 337 aa overlap" FT /db_xref="GOA:Q8XGD4" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8XGD4" FT /protein_id="CAD07601.1" FT /translation="MSEGWNIAILGATGAVGEALLETLAERQFPVGEIYALARHESAGE FT HLRFGGKSVIVQDAADFDWTQAQLAFFVAGAEASAAWIDDATNAGCLVIDSSGLFALEP FT DVPLVVPEVNPYVLADYRNRNVIAVADSLTSQLLAALKPLIDQGGLSRIAVTSMLSASA FT QGKKAVDALAGQSAKLLNGIPIDEDDFFGRQLAFNMLPLLPDREGSVRQERRIVDEVRK FT ILQDDGVMISASVVQSPVFYGHAQMVSFEALRPLAAEEAREAFSRGEDIVLSEETDYPT FT QVGDASGNPQLSIGCVHNDYGMPEQIQFWSVADNVRFGGALMAVKIAEKLVQEYLY" FT misc_feature complement(135309..136295) FT /note="Pfam match to entry PF01118 Semialdhyde_dh, FT Semialdehyde dehydrogenase, score 432.90, E-value 2.9e-126" FT RBS complement(136317..136320) FT /note="possible RBS" FT CDS complement(136375..137511) FT /transl_table=11 FT /gene="STY2601" FT /gene_synonym="pdxB" FT /product="erythronate-4-phosphate dehydrogenase" FT /EC_number="1.1.1.-" FT /note="Orthologue of E. coli pdxB (PDXB_ECOLI); Fasta hit FT to PDXB_ECOLI (378 aa), 89% identity in 377 aa overlap" FT /db_xref="GOA:P60801" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P60801" FT /protein_id="CAD07602.1" FT /translation="MKILVDENMPYARELFSRLGEVKAVPGRPIPVEELNHADALMVRS FT VTKVNESLLSGTPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALL FT MLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDE FT LVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLN FT AGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGRE FT QRVALETLLPAPEFGRITLHGPLDQPTLKRLAHLVYDVRRDDAPLRKVAGIPGEFDKLR FT KNYLERREWSSLYVMCDDETAAALLCKLGFNAVHHPAH" FT misc_feature complement(136750..137310) FT /note="Pfam match to entry PF00389 2-Hacid_DH, D-isomer FT specific 2-hydroxyacid dehydrogenases, score 260.20, FT E-value 3e-106" FT misc_feature complement(136873..136923) FT /note="PS00671 D-isomer specific 2-hydroxyacid FT dehydrogenases signature 3" FT misc_feature complement(137074..137157) FT /note="PS00065 D-isomer specific 2-hydroxyacid FT dehydrogenases NAD-binding signature" FT RBS 137601..137605 FT /note="possible RBS" FT CDS 137615..138616 FT /transl_table=11 FT /gene="STY2602" FT /gene_synonym="div" FT /product="Div protein" FT /note="Orthologue of E. coli div (DIV_ECOLI); Fasta hit to FT DIV_ECOLI (331 aa), 60% identity in 333 aa overlap" FT /db_xref="UniProtKB/TrEMBL:O06951" FT /protein_id="CAD07603.1" FT /translation="MHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISL FT TQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTEL FT LGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLL FT PAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTL FT SLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRR FT VEREADELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS" FT CDS complement(138613..139791) FT /transl_table=11 FT /gene="STY2603" FT /product="putative transmembrane transporter" FT /note="Fasta hit to YHHS_ECOLI (419 aa), 42% identity in FT 372 aa overlap" FT /note="Orthologue of E. coli P77549; Fasta hit to P77549 FT (392 aa), 88% identity in 392 aa overlap" FT /note="Shows weak similarity to many transporters e.g. FT Erwinia chrysanthemi sugar efflux transporter sotA FT SW:SOTA_ERWCH (Q9S3K0) (393 aa) fasta scores: E(): 1.6e-08, FT 25.7% id in 409 aa overlap. Contains hydrophobic, probable FT membrane-spanning regions" FT /db_xref="GOA:Q8Z4Z9" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4Z9" FT /protein_id="CAD07604.1" FT /translation="MTAVSQKTTTPSADFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHE FT LGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMLACGLAGAAWLLAALL FT PVSAPVKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAA FT GAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPG FT LGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKV FT AVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFSALGVEVVKRVPAQVRGTAL FT GGYAAFQDISYGVTGPLAGMLATSYGYPSVFLAGAISAVVGILVTILSFRRG" FT RBS complement(139798..139801) FT /note="possible RBS" FT CDS complement(139971..140345) FT /transl_table=11 FT /gene="STY2604" FT /product="putative bacteriophage protein" FT /note="N-terminus shows weak similarity to that of FT Bacteriophage D108 repressor protein CI SW:RPC1_BPD10 FT (P07040) (174 aa) blastp score: Expect = 2.1e-05, FT Identities = 32/111 (28%), Positives = 52/111 (46%)" FT /db_xref="GOA:Q8Z4Z8" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Z8" FT /protein_id="CAD07605.1" FT /translation="MAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKAGVRRKRVKS FT KAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGR FT FKVRGMKAVFLFLFDDTPPR" FT RBS complement(140355..140359) FT /note="possible RBS" FT CDS 140517..140765 FT /transl_table=11 FT /gene="STY2605" FT /product="putative DNA-binding protein" FT /note="Similar to many e.g. Bacteriophage D108 DNA-binding FT protein ner SW:DBNE_BPD10 (P06903) (73 aa) fasta scores: FT E(): 2.6e-13, 57.8% id in 64 aa and Bacteriophage Mu FT DNA-binding protein ner SW:DBNE_BPMU (P06020) (74 aa) fasta FT scores: E(): 2.7e-12, 53.0% id in 66 aa" FT /note="Paralogue of E. coli nlp (NLP_ECOLI); Fasta hit to FT NLP_ECOLI (92 aa), 48% identity in 79 aa overlap" FT /db_xref="GOA:Q8Z4Z7" FT /db_xref="HSSP:1NEQ" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Z7" FT /protein_id="CAD07606.1" FT /translation="MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRS FT WPRAERIIADALGITPQEIWPSRYGDMQIKNDADIAE" FT misc_feature 140553..140708 FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 21.20, E-value 0.025" FT CDS 140934..141302 FT /transl_table=11 FT /gene="STY2606" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Z6" FT /protein_id="CAD07607.1" FT /translation="MSWDKRVAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHA FT KDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGAEWYSDFKQRDMW FT AGPGYRAARPSYTIYRKN" FT CDS 141302..141820 FT /transl_table=11 FT /gene="STY2607" FT /product="putative lipoprotein" FT /note="Unknown function. Contains probable N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Z5" FT /protein_id="CAD07608.1" FT /translation="MKTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFMNDVNTP FT DDTTALMQRYVAKEVIHRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFL FT GGEKVDVLLATESTPIHLEVYTRWEEGRWKIYRVRDADKDYEQPIYDAGAITQAEAWSA FT KVAPEYEKH" FT misc_feature 141317..141349 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(141887..142543) FT /transl_table=11 FT /gene="STY2608" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical protein FT SW:YPRA_ECOLI (P13974) (217 aa) fasta scores: E(): 1.3e-09, FT 32.4% id in 213 aa" FT /db_xref="GOA:Q8Z4Z4" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Z4" FT /protein_id="CAD07609.1" FT /translation="MPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLAA FT PFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNVFSGPEPWM FT AELSRQFFLHKFLNTLVMCFLAPVAEEIIFRGFLLNSSIGWGRYSRVSGIIITSLAFAF FT MHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPITLHILNNAWVIFGLLFSATE" FT CDS complement(142641..143855) FT /transl_table=11 FT /gene="STY2609" FT /gene_synonym="fabB" FT /product="3-oxoacyl-[acyl-carrier-protein] synthase I" FT /EC_number="2.3.1.41" FT /note="Fasta hit to FABF_ECOLI (412 aa), 38% identity in FT 417 aa overlap" FT /note="Orthologue of E. coli fabB (FABB_ECOLI); Fasta hit FT to FABB_ECOLI (406 aa), 97% identity in 404 aa overlap" FT /db_xref="GOA:Q8XEK7" FT /db_xref="HSSP:1DD8" FT /db_xref="InterPro:IPR018201" FT /db_xref="UniProtKB/TrEMBL:Q8XEK7" FT /protein_id="CAD07610.1" FT /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMR FT SQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAG FT SGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSAC FT ATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTY FT DAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCM FT QMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGV FT QEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTERELTTVMSNSFGFGGTNATL FT VMRKL" FT misc_feature complement(142647..143846) FT /note="Pfam match to entry PF00109 ketoacyl-synt, FT Beta-ketoacyl synthase, score 407.20, E-value 1.6e-118" FT misc_feature complement(143346..143396) FT /note="PS00606 Beta-ketoacyl synthases active site" FT RBS complement(143861..143865) FT /note="possible RBS" FT CDS 143955..146015 FT /transl_table=11 FT /gene="STY2610" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli P77182; Fasta hit to P77182 FT (688 aa), 79% identity in 686 aa overlap" FT /db_xref="GOA:Q8Z4Z3" FT /db_xref="InterPro:IPR017610" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4Z3" FT /protein_id="CAD07611.1" FT /translation="MRHQAHIVKIAIPPVRRVTYVKQYAIQPATLEFNAEGTPVSRDFD FT DVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFR FT SAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLL FT DRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAKNPDMWTPNLFNAMARLAR FT PGATLATFTSAGFVRRGLQEAGFTMQKHKGFGRKREMLCGVMEQHLMPTLSAPWFYCSG FT SEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDA FT AINRFFPTAFTFARRLYDALPVSFDHAWCGVTQLGWDEKSQQKIAQMLSLALPAGLASA FT LNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQ FT ESRWQLRFTSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQ FT VLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDANWATEVD FT VSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAASAPVYPGLFMLGAL FT GSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK" FT misc_feature 145902..145931 FT /note="PS00659 Glycosyl hydrolases family 5 signature" FT CDS complement(146067..146342) FT /transl_table=11 FT /gene="STY2611" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli YFCL_ECOLI; Fasta hit to FT YFCL_ECOLI (92 aa), 86% identity in 91 aa overlap" FT /db_xref="InterPro:IPR014987" FT /db_xref="UniProtKB/TrEMBL:Q8XER1" FT /protein_id="CAD07612.1" FT /translation="MIAEFESRILALIDDMVEHASDDELFASGYLRGHLTLAIAELESG FT DDHSVEAVYANVSQSLEKAIGAGELSPRDQALVKAMWDNLFDKAKQ" FT CDS complement(146375..146924) FT /pseudo FT /transl_table=11 FT /gene="STY2613" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Similar to Escherichia coli hypothetical protein FT yfcM SW:YFCM_ECOLI (P76938; P76497) (182 aa) fasta scores: FT E(): 0, 94.0% id in 116 aa and Haemophilus influenzae FT hypothetical protein HI1563 SW:YFCM_HAEIN (P44255) (178 aa) FT fasta scores: E(): 0, 63.4% id in 112 aa. Contains FT frameshift at codon 118. The sequence has been checked and FT is believed to be correct" FT CDS complement(146924..147733) FT /transl_table=11 FT /gene="STY2614" FT /gene_synonym="yfcA" FT /product="putative membrane protein" FT /note="Similar to Haemophilus influenzae hypothetical FT protein HI0198 SW:YFCA_HAEIN (P46490) (255 aa) fasta FT scores: E(): 0, 54.3% id in 243 aa and Vibrio cholerae FT hypothetical protein VC2384 TR:Q9S1F3 (EMBL:AJ249205) (261 FT aa) fasta scores: E(): 0, 48.2% id in 255 aa. Contains FT hydrophobic, possible membrane-spanning regions" FT /note="Orthologue of E. coli yfcA (YFCA_ECOLI); Fasta hit FT to YFCA_ECOLI (269 aa), 91% identity in 269 aa overlap" FT /db_xref="GOA:Q8XEQ5" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:Q8XEQ5" FT /protein_id="CAD07614.1" FT /translation="MDNFYDLFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALMA FT AGMSPANALATNKLQACGGSLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHV FT QADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAA FT GSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVGQFLG FT ARMGSRLVLSKGQKLIRPMIVIVSAVMSARLLYDSHGQEILHWLGMN" FT misc_feature complement(146972..147448) FT /note="Pfam match to entry PF01925 DUF81, Domain of unknown FT function DUF81, score 169.10, E-value 3.1e-47" FT CDS complement(147733..148557) FT /transl_table=11 FT /gene="STY2615" FT /gene_synonym="mepA" FT /product="penicillin-insensitive murein endopeptidase FT precursor" FT /EC_number="3.4.99.-" FT /note="Orthologue of E. coli mepA (MEPA_ECOLI); Fasta hit FT to MEPA_ECOLI (274 aa), 89% identity in 274 aa overlap" FT /db_xref="GOA:Q8Z4Z2" FT /db_xref="InterPro:IPR005073" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4Z2" FT /protein_id="CAD07615.1" FT /translation="MKKTAIALLAWFVSSASLAATPWQKITHPVPGAAQSIGSFANGCI FT IGADTLPVQSDNYQVMRTDQRRYFGHPDLVMFIQRLSHQAQQRGLGTVLIGDMGMPAGG FT RFNGGHASHQTGLDVDIFLQLPKTRWSQAQLLRPQALDLVSRDGKHVVPSRWSSDIASL FT IKLAAQDNDVTRIFVNPAIKQQLCLDAGSDRDWLRKVRPWFQHRAHMHVRLRCPADSLE FT CEDQPLPPPGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVL" FT CDS complement(148561..149646) FT /transl_table=11 FT /gene="STY2616" FT /gene_synonym="aroC" FT /product="chorismate synthase" FT /EC_number="4.6.1.4" FT /note="Similar to Salmonella typhi chorismate synthase aroC FT SW:AROC_SALTI (P16280) (360 aa) fasta scores: E(): 0, 99.7% FT id in 360 aa" FT /note="Orthologue of E. coli aroC (AROC_ECOLI); Fasta hit FT to AROC_ECOLI (360 aa), 95% identity in 360 aa overlap" FT /db_xref="GOA:P16280" FT /db_xref="InterPro:IPR000453" FT /db_xref="UniProtKB/Swiss-Prot:P16280" FT /protein_id="CAD07616.1" FT /translation="MAGNTIGQLFRVTTFGESHGLALGGIVDGVPPGIPLTEADLQHDL FT DRRRPGTSRYTTQRREPDQVKILSGVFDGVTTGTSIGLLIENTDQRSQDYSAIKDVFRP FT GHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDI FT PLEIKDWRQVELNPFFCPDADKLDALDELMRALKKEGDSIGAKVTVMASGVPAGLGEPV FT FDRLDADIAHALMSINAVKGVEIGEGFNVVALRGSQNRDEITAQGFQSNHAGGILGGIS FT SGQHIVAHMALKPTSSITVPGRTINRMGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVL FT MDHLLRHRAQNADVKTEIPRW" FT misc_feature complement(148603..149619) FT /note="Pfam match to entry PF01264 Chorismate_synt, FT Chorismate synthase, score 795.70, E-value 2.5e-242" FT misc_feature complement(148642..148692) FT /note="PS00789 Chorismate synthase signature 3" FT misc_feature complement(149233..149277) FT /note="PS00788 Chorismate synthase signature 2" FT misc_feature complement(149554..149601) FT /note="PS00787 Chorismate synthase signature 1" FT CDS complement(149682..150614) FT /transl_table=11 FT /gene="STY2617" FT /product="conserved hypothetical protein" FT /note="Similar to many putative methylases e.g. Escherichia FT coli hypothetical adenine-specific methylase yfcB FT SW:YFCB_ECOLI (P39199; P78252; P76939) (421 aa) fasta FT scores: E(): 0, 94.8% id in 310 aa and Haemophilus FT influenzae hypothetical adenine-specific methylase HI1201 FT SW:YFCB_HAEIN (P45106) (314 aa) fasta scores: E(): 0, 60.3% FT id in 305 aa. Shows weak similarity to part of Escherichia FT coli HemK protein hemK SW:HEMK_ECOLI (P37186; Q46754) (277 FT aa) fasta scores: E(): 3.4e-15, 32.5% id in 194 aa" FT /db_xref="GOA:P0A294" FT /db_xref="InterPro:IPR007848" FT /db_xref="UniProtKB/Swiss-Prot:P0A294" FT /protein_id="CAD07617.1" FT /translation="MDKIFVDEAVSELHTIQDMLRWAVSRFSAANIWYGHGTDNPWDEA FT VQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEF FT YVDERVLVPRSPIGELINNHFAGLISQQPKYILDMCTGSGCIAIACAYAFPDAEVDAVD FT ISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNE FT YRHEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVGNSMVHLMEQYPDVPFTWL FT EFDNGGDGVFMLTKAQLLAAREHFNIYKD" FT misc_feature complement(149985..150005) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature" FT RBS complement(150620..150624) FT /note="possible RBS" FT CDS 150780..151331 FT /transl_table=11 FT /gene="STY2618" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli YFCN_ECOLI; Fasta hit to FT YFCN_ECOLI (183 aa), 94% identity in 183 aa overlap" FT /db_xref="InterPro:IPR002625" FT /db_xref="UniProtKB/Swiss-Prot:P67247" FT /protein_id="CAD07618.1" FT /translation="MKKKTSLSEEDQALFRQLMVGTRKIKQDTIVHRPLRKKITEVPTR FT RLIQEQADASHYFSDEFQPLLNTEGPVKYVREDVSHFELKKMRRGDYSPELFLDLHGLT FT QLQAKQELGALIAACRREHIFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYG FT GDAALLVLIEVEEWQPPELP" FT misc_feature 151071..151295 FT /note="Pfam match to entry PF01713 Smr, Smr domain, score FT 138.80, E-value 9.6e-38" FT CDS complement(151380..151865) FT /transl_table=11 FT /gene="STY2619" FT /product="phosphohistidine phosphatase" FT /EC_number="3.1.3.-" FT /note="Orthologue of E. coli SIXA_ECOLI; Fasta hit to FT SIXA_ECOLI (161 aa), 89% identity in 161 aa overlap" FT /db_xref="GOA:Q8Z4Z1" FT /db_xref="InterPro:IPR013078" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Z1" FT /protein_id="CAD07619.1" FT /translation="MQVFIMRHGDAALDAASDSVRPLTSCGCDESRLMANWLKGQKVDI FT ERVLVSPFLRAEQTLDVVGDCMNLPTQVDVLPELTPCGDVGLVSAYLQALANEEIGSVL FT VISHLPLVGYLVSELCPGETPPMFTTSAIANVTLDESGKGTFNWQMSPCNLKMAKAI" FT CDS complement(152074..154221) FT /transl_table=11 FT /gene="STY2620" FT /product="putative fatty acid oxidation complex alpha FT subunit" FT /EC_number="4.2.1.17" FT /EC_number="5.1.2.3" FT /EC_number="1.1.1.35" FT /note="Similar to many, both bacterial and eukaryotic e.g. FT Pseudomonas fragi fatty oxidation complex alpha subunit FT [includes: enoyl-coa hydratase faoA SW:FAOB_PSEFR (P28793) FT (715 aa) fasta scores: E(): 0, 36.0% id in 714 aa, and to FT Escherichia coli fatty oxidation complex alpha subunit FT [includes: enoyl-coa hydratase fadb or oldB SW:FADB_ECOLI FT (P21177) (729 aa) fasta scores: E(): 0, 35.9% id in 710 aa" FT /note="Fasta hit to FADB_ECOLI (729 aa), 36% identity in FT 710 aa overlap" FT /note="Orthologue of E. coli YFCX_ECOLI; Fasta hit to FT YFCX_ECOLI (714 aa), 86% identity in 712 aa overlap" FT /db_xref="GOA:Q8Z4Z0" FT /db_xref="HSSP:3HDH" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4Z0" FT /protein_id="CAD07620.1" FT /translation="MTTTSAFMLSVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQ FT IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPV FT IAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVST FT ALDMILTGKQLRARQALKAGLVDDVVPQTILLEAAVELAKKERLAQRTLPVRERILAGP FT LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQ FT SQALRAVFFASTEVKKDPGSDAPPGPLNSVGILGGGLMGGGIAWVTACKGGLPVRIKDI FT NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFED FT LPLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVE FT VIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVE FT HIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVASILNDDRKG FT RKNGRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLSAQQVAERCVMLMLNEAARCFD FT EKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQ FT LVRMAERREHFWTNGETDQGN" FT misc_feature complement(152464..153291) FT /note="Pfam match to entry PF00725 3HCDH, 3-hydroxyacyl-CoA FT dehydrogenase, score 412.90, E-value 3e-120" FT misc_feature complement(152683..152757) FT /note="PS00067 3-hydroxyacyl-CoA dehydrogenase signature" FT misc_feature complement(153652..154173) FT /note="Pfam match to entry PF00378 ECH, Enoyl-CoA FT hydratase/isomerase family, score 225.00, E-value 1.1e-63" FT CDS complement(154221..155531) FT /transl_table=11 FT /gene="STY2621" FT /product="putative 3-ketoacyl-CoA thiolase" FT /EC_number="2.3.1.16" FT /note="Similar to many, both bacterial and eukaryotic e.g. FT Bos taurus trifunctonal enzyme beta subunit, mitochondrial FT precursor hadhB SW:ECHB_BOVIN (O46629) (475 aa) fasta FT scores: E(): 0, 42.3% id in 421 aa" FT /note="Fasta hit to ATOB_ECOLI (394 aa), 35% identity in FT 420 aa overlap" FT /note="Fasta hit to THIK_ECOLI (387 aa), 36% identity in FT 428 aa overlap" FT /note="Fasta hit to YQEF_ECOLI (393 aa), 32% identity in FT 422 aa overlap" FT /note="Fasta hit to P77525 (401 aa), 34% identity in 424 aa FT overlap" FT /note="Orthologue of E. coli YFCY_ECOLI; Fasta hit to FT YFCY_ECOLI (436 aa), 93% identity in 436 aa overlap" FT /db_xref="GOA:Q8Z4Y9" FT /db_xref="HSSP:1AFW" FT /db_xref="InterPro:IPR016038" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4Y9" FT /protein_id="CAD07621.1" FT /translation="MRQALPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVV FT GELLARSEIPADAIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQ FT AVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLFSRL FT RLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKL FT AEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAA FT VILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLF FT DMHEAFAAQTLANLQLLGSERFAREVFGRAQATGEVDDAKFNVLGGSIAYGHPFAATGA FT RMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE" FT misc_feature complement(154224..155498) FT /note="Pfam match to entry PF00108 thiolase, Thiolase, FT score 429.30, E-value 3.4e-125" FT misc_feature complement(154242..154283) FT /note="PS00099 Thiolases active site" FT misc_feature complement(154338..154388) FT /note="PS00737 Thiolases signature 2" FT misc_feature complement(155193..155249) FT /note="PS00098 Thiolases acyl-enzyme intermediate FT signature" FT RBS complement(155536..155539) FT CDS complement(155709..155993) FT /transl_table=11 FT /gene="STY2622" FT /product="conserved hypothetical protein" FT /note="Fasta hit to YIIS_ECOLI (99 aa), 41% identity in 96 FT aa overlap" FT /note="Orthologue of E. coli YFCZ_ECOLI; Fasta hit to FT YFCZ_ECOLI (94 aa), 94% identity in 94 aa overlap" FT /db_xref="InterPro:IPR005272" FT /db_xref="UniProtKB/TrEMBL:Q8XG86" FT /protein_id="CAD07622.1" FT /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFATRAEAEETLA FT ALTEKARSVESEPCQITPTFTEESEGVRLDIDFVFACEAETLIFQLGLR" FT RBS complement(156003..156006) FT /note="possible RBS" FT RBS 156352..156356 FT /note="possible RBS" FT CDS 156358..157671 FT /transl_table=11 FT /gene="STY2623" FT /gene_synonym="fadL" FT /product="long-chain fatty acid transport protein FT precursor" FT /note="Orthologue of E. coli fadL (FADL_ECOLI); Fasta hit FT to FADL_ECOLI (448 aa), 92% identity in 446 aa overlap" FT /db_xref="GOA:Q8Z4Y8" FT /db_xref="InterPro:IPR005017" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4Y8" FT /protein_id="CAD07623.1" FT /translation="MVMSQKTLFTKSALAVAVAIISTQAWSAGFQLNEFSSSGLGRAYS FT GEGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSRRTLDADNIAPTA FT WVPNVHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRL FT NEAWSFGLGFDAVYARAKIERFAGDLGQLVAAQNPALAPVAGQILSDTKIAHLNGNQWG FT FGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLPIAINRFNLPIPTATGGATQSG FT YLTLNLPEMWEVSGYNRVAPQWAIHYSLAYTSWSQFQELKAKSTAGDTLFEKHEGFKDA FT YRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASV FT DVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF" FT CDS complement(157732..158487) FT /transl_table=11 FT /gene="STY2624" FT /gene_synonym="vacJ" FT /product="VacJ lipoprotein precursor" FT /note="Orthologue of E. coli vacJ (VACJ_ECOLI); Fasta hit FT to VACJ_ECOLI (251 aa), 94% identity in 251 aa overlap" FT /db_xref="GOA:Q8XFB9" FT /db_xref="InterPro:IPR007428" FT /db_xref="UniProtKB/TrEMBL:Q8XFB9" FT /protein_id="CAD07624.1" FT /translation="MKLRLSALALGTTLLVGCASSGTEQQGRSDPFEGFNRTMYNFNFN FT VLDPYVVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAIMVNYFLQGDPYQGMVHFTRFF FT LNTLLGMGGFIDVAGMANPKLQRVEPHRFGSTLGHYGVGYGPYMQLPFYGSFTLREDGG FT DMADTLYPVLSWLTWPMSIGKWTIEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHD FT FIANGGKLKPQENPNAQAIQDELKEIDSE" FT misc_feature complement(158434..158466) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS 158766..158770 FT /note="possible RBS" FT CDS 158776..159717 FT /transl_table=11 FT /gene="STY2625" FT /gene_synonym="yfdC" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yfdC (YFDC_ECOLI); Fasta hit FT to YFDC_ECOLI (310 aa), 88% identity in 304 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z4Y7" FT /db_xref="InterPro:IPR000292" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y7" FT /protein_id="CAD07625.1" FT /translation="MDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHE FT HIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFG FT FIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEY FT MPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILM FT TWLIALGDTTHIVVGSVEILYLVFNGTLPWSDFFWPFALPTLAGNICGGTFIFALMSHA FT QIRNDMSNKRKEEARLRGERLERERKKAEKQR" FT tRNA 159793..159867 FT /note="tRNA Arg anticodon CCT, Cove score 73.20" FT CDS complement(160018..160233) FT /pseudo FT /transl_table=11 FT /gene="STY2626" FT /product="putative transposase (pseudogene)" FT /note="Similar to transposases e.g. Burkholderia cepacia FT transposase TR:Q45111 (EMBL:U44828) (419 aa) fasta scores: FT E(): 1.2e-12, 46.8% id in 77 aa and Yersinia pestis FT transposase Y1062 or YPMT1.80C TR:O68779 (EMBL:AF053947) FT (402 aa) fasta scores: E(): 7.7e-12, 45.8% id in 83 aa" FT CDS 160960..161349 FT /transl_table=11 FT /gene="gtrA2" FT /gene_synonym="STY2627a" FT /product="bactoprenol-linked glucose transferase" FT /note="Similar to e.g Bacteriophage P22 bactoprenol-linked FT glucose transferase gtrA SW:GTRA_BPP22 (P57021) (120 aa) FT fasta scores: E(): 0, 91.5% id in 118 aa, Bacteriophage SfX FT bactoprenol-linked glucose transferase gtrA SW:GTRA_BPSFX FT (Q9T1D7) (120 aa) fasta scores: E(): 0, 76.3% id in 118 aa FT and Bacteriophage SfV bactoprenol-linked glucose FT transferase gtrA SW:GTRA_BPSF5 (O22008) (120 aa) fasta FT scores: E(): 0, 77.1% id in 118 aa. Contains hydrophobic, FT probable membrane-spanning regions" FT /db_xref="GOA:Q8Z4Y6" FT /db_xref="InterPro:IPR016480" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y6" FT /protein_id="CAD07627.1" FT /translation="MLKLFAKYTSIGVLNTLIHWGVFAFCMYGMHTHQALTNFSDFVIA FT VSFSFYANARFTFNASTTAILYMMYMGFMGTLSAVVGWMADQCSLPPLVTLITFSAISL FT VCGFIYSRFIIFRDKNENLSCRPGF" FT CDS 161318..161536 FT /pseudo FT /transl_table=11 FT /gene="gtrB2" FT /gene_synonym="STY2627b" FT /product="bactoprenol glucosyl transferase (pseudogene)" FT /note="Similar to the N-termini of many glucosyl FT transferases e.g. Bacteriophage P22 bactoprenol glucosyl FT transferase SW:GTRB_BPP22 (P57022) (310 aa) fasta scores: FT E(): 1.7e-20, 79.5% id in 73 aa" FT CDS 161589..163511 FT /transl_table=11 FT /gene="STY2629" FT /product="putative lipopolysaccharide modification FT acyltransferase" FT /note="Similar to Pseudomonas aeruginosa WbpC wbpC FT TR:P72134 (EMBL:U50396) (629 aa) fasta scores: E(): 0, FT 30.3% id in 565 aa and Salmonella typhimurium OafA oafA FT TR:P74874 (EMBL:U65941) (609 aa) fasta scores: E(): 0, FT 31.0% id in 645 aa. N-terminal half is similar to Neisseria FT meningitidis putative lipopolysaccharide modification FT acyltransferase NMA0619 TR:Q9JVY7 (EMBL:AL162753) (622 aa) FT fasta scores: E(): 0, 36.3% id in 380 aa and Neisseria FT meningitidis lipopolysaccharide biosynthesis protein wbpC, FT putative, NMB1836 TR:Q9JXY4 (EMBL:AE002533) (623 aa) fasta FT scores: E(): 0, 36.2% id in 381 aa. Contains hydrophobic, FT probable membrane-spanning regions" FT /db_xref="GOA:Q8Z4Y5" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y5" FT /protein_id="CAD07629.1" FT /translation="MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVIS FT GYLITSIILKSASNKSFSYLDFYKRRVLRIFPALSIVLVSCLIVGWIYLFQDDYKLLGK FT HVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRSKNH FT NRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSL FT SKLMSLLGIILIALSITMIDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPV FT VFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELTLLLLLSFFLAILTYYLIEKPLRNS FT RSKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLR FT GGICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDG FT NAPPLFVDGKDDLQRSVITLNNNRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALS FT LTIKKIKEASPDSRIVFIGPVPEWNANLVKIISNYLSEFKKTPPLYMTYGLNSEISEWD FT SYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIG FT NKIIK" FT misc_feature 161673..161819 FT /note="Pfam match to entry PF01757 DUF33, Domain of unknown FT function DUF33, score 43.70, E-value 2.3e-11" FT misc_feature 161919..162131 FT /note="Pfam match to entry PF01757 DUF33, Domain of unknown FT function DUF33, score 13.30, E-value 0.0085" FT misc_feature 162243..162545 FT /note="Pfam match to entry PF01757 DUF33, Domain of unknown FT function DUF33, score 34.10, E-value 1.2e-08" FT CDS complement(163628..164128) FT /pseudo FT /transl_table=11 FT /gene="STY2631" FT /product="putative transposase (pseudogene)" FT /note="Similar to many transposases e.g. Yersinia pestis FT plasmid Lcr ORF2 TR:Q56970 (EMBL:X78303) (270 aa) fasta FT scores: E(): 0, 71.1% id in 149 aa, Yersinia pestis FT transposase Y1062 or YPMT1.80C TR:O68779 (EMBL:AF053947) FT (402 aa) fasta scores: E(): 0, 71.1% id in 149 aa and FT Escherichia coli transposase-like protein tnpA TR:AAG18473 FT (EMBL:AF143819) (402 aa) fasta scores: E(): 4.8e-26, 56.4% FT id in 149 aa" FT RBS complement(164139..164144) FT /note="possible RBS" FT CDS complement(164525..164770) FT /pseudo FT /transl_table=11 FT /gene="STY2631a" FT /product="putative bacteriophage tail protein (pseudogene)" FT /note="Similar to part of Bacteriophage P22 bifunctional FT tail protein SW:TSPE_BPP22 (P12528) (667 aa) fasta scores: FT E(): 9.7e-16, 56.1% id in 82 aa" FT CDS complement(164992..165930) FT /transl_table=11 FT /gene="STY2632" FT /gene_synonym="pgtE" FT /gene_synonym="prtA" FT /product="outer membrane protease E" FT /product="protease VII precursor" FT /EC_number="3.4.21.-" FT /note="Similar to Salmonella typhimurium outer membrane FT protease E precursor pgtE or prtA SW:PGTE_SALTY (P06185) FT (296 aa) fasta scores: E(): 0, 96.8% id in 277 aa, Yersinia FT pestis coagulase/fibrinolysin precursor pla SW:COLY_YERPE FT (P17811) (312 aa) fasta scores: E(): 0, 71.5% id in 312 aa FT and Escherichia coli protease VII precursor ompT FT SW:OMPT_ECOLI (P09169) (317 aa) fasta scores: E(): 0, 46.9% FT id in 320 aa" FT /db_xref="GOA:Q8Z4Y4" FT /db_xref="HSSP:1I78" FT /db_xref="InterPro:IPR020079" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y4" FT /protein_id="CAD07632.1" FT /translation="MKKHAIAVMMIAVFSESVYAESTLFIPDVSPESVTTSLSVGVLNG FT KSRELVYDTDTGRKLSQLDWKIKNVATLQGDLSWEPYSFMTLDARGWTSLASGSGHMVD FT HDWMSSEQPGWTDRSIHPDTSANYANEYDLNVKGWLLQGDNYKAGVTAGYQETRFSWTA FT RGGSYIYDNGRYIGNFPHGVRGIGYSQRFEMPYIGLAGDYRINDFECNVLFKYSDWVNA FT HDNDEHYMRKLTFREKTENSRYYGASIDAGYYITSNAKIFAEFAYSKYEEGKGGTQIID FT KTSGNTAYFGGDAAGIANNNYTVTAGLQYRF" FT misc_feature complement(165094..165930) FT /note="Pfam match to entry PF01278 Omptin, Omptin family, FT score 744.40, E-value 4.8e-220" FT misc_feature complement(165427..165477) FT /note="PS00835 Serine proteases, omptin family signature 2" FT misc_feature complement(165559..165588) FT /note="PS00834 Serine proteases, omptin family signature 1" FT misc_feature complement(165736..165774) FT /note="PS00018 EF-hand calcium-binding domain" FT RBS complement(165940..165943) FT /note="possible RBS" FT CDS complement(166198..167445) FT /transl_table=11 FT /gene="pgtA" FT /gene_synonym="STY2633" FT /product="phosphoglycerate transport system transcriptional FT regulatory protein PgtA" FT /note="Similar to Salmonella typhimurium phosphoglycerate FT transport system transcriptional regulatory protein PgtA FT pgtA SW:PGTA_SALTY (P06184) (415 aa) fasta scores: E(): 0, FT 98.1% id in 415 aa" FT /db_xref="GOA:Q8Z4Y3" FT /db_xref="HSSP:1QKK" FT /db_xref="InterPro:IPR002197" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y3" FT /protein_id="CAD07633.1" FT /translation="MLNDECSILLIDDDVDVLDAYTQMLEQAGYRVRGFTHPFEAKEWV FT KADWEGIVLSDVCMPGCSGIDLMTLFHQDDDQLPILLITGHGDVPMAVDAVKKGAWDFL FT QKPVDPGKLLILIEDALRQRRSVIARRQYCQQTLQVDLIGRSEWMNQFRQRLQQLAETD FT IAVWFYGEHDTGRMTGARYLHQLGRNAKGPFVRYELTPENAGQLETFIDQAQGGTLVLS FT YPEYLTREQQHHLARLQSLEHRPFRLVGVGSASLVEQAAANQIAAELYYCFAMTQIACQ FT SLSQRPDDIEPLFRHYLRKACLRLNHPVPEIAGELLKGIMRRAWPSNVRELANAAELFA FT VGVLPLAETVNPQLLLQEPTPLDRRVEEYERQIITEALNIHQGRINEVAEYLQIPRKKL FT YLRMKKYGLSKEHYKF" FT misc_feature complement(166417..167022) FT /note="Pfam match to entry PF00158 sigma54, Sigma-54 FT transcription factors, score 224.50, E-value 1.5e-63" FT misc_feature complement(166444..166473) FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature" FT misc_feature complement(167095..167430) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 134.50, E-value 1.9e-36" FT CDS complement(167435..169441) FT /transl_table=11 FT /gene="pgtB" FT /gene_synonym="STY2634" FT /product="phosphoglycerate transport system sensor protein FT PgtB" FT /EC_number="2.7.3.-" FT /note="Similar to Salmonella typhimurium phosphoglycerate FT transport system sensor protein PgtB pgtB SW:PGTB_SALTY FT (P37433) (593 aa) fasta scores: E(): 0, 98.6% id in 513 aa, FT and to Vibrio cholerae putative phosphoglycerate transport FT regulatory protein pgtB, vca0705 TR:Q9KLN8 (EMBL:AE004400) FT (789 aa) fasta scores: E(): 1.4e-26, 25.0% id in 781 aa, FT and to Rhizobium leguminosarum c4-dicarboxylate transport FT sensor protein DctB dctB SW:DCTB_RHILE (P10047) (622 aa) FT fasta scores: E(): 2.7e-21, 35.1% id in 259 aa" FT /db_xref="GOA:Q8Z4Y2" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y2" FT /protein_id="CAD07634.1" FT /translation="MKGRLLQRLRQLSISNSLRGAFLTGALLTLIVSMVSLYSWHEQSS FT QVRYSLDEYFPRIHSAFLIEGNLNLAVDQLNEFLLAPNTTVRLQLRTQIIQHLDKIERL FT SQGLQLAERRQLAVILQDSRTLLAELDNALYNMFLVREKVSELSARIDWLHDDFTTELN FT SLVQDFTWQQGTLLDQIEANQGDAAQYLQRSREVQNEQQQVYTLARIENQIVDDLRDRL FT NELKSGNNDGMLVETHIRYLENLKKTADENIRALDDWPSTITLRQTIDELLEIGMVKNK FT MPDTMRDYVAAQKALLDASRAREATLGRFRTLLEAQLGSSHQQMQTFNQRLEQIVRVSG FT GLILVTTLLALLLAWGLNHYFIRSRLVKRFTALNQAVVQIGLGRTDSTIPVYGRDELGR FT IARLLRHTLGQLNMQRRQLEQEVAERKEIEADLRAMQDELIQTAKLAVVGQTMTTLAHE FT INQPLNALSMYLFTAGRAIEQGQSGQARNTLTKAEGLINRIDAIIRSLRQFTRRAELET FT PLYPVDLRQTFVAAWELLAMRHQSRQGALSLPTDTVWVSGDEVRIQQVLVNVLANALDA FT CSHDAAIAVTWQTQGEALEVYIADNGPGWPGALLPSLLKPFTTSKAVGLGIGLSISVSL FT MAQMKGDLRLASTLTRNACVVLQFSVTDVDDVE" FT misc_feature complement(167462..168073) FT /note="Pfam match to entry PF00512 signal, Histidine FT kinase, score 218.40, E-value 1.1e-61" FT misc_feature complement(168203..168412) FT /note="Pfam match to entry PF00672 DUF5, HAMP domain, score FT 45.80, E-value 9.4e-10" FT CDS complement(169438..170631) FT /transl_table=11 FT /gene="pgtC" FT /gene_synonym="STY2635" FT /product="phosphoglycerate transport regulatory protein FT PgtC precursor" FT /note="Similar to Salmonella typhimurium phosphoglycerate FT transport regulatory protein PgtC precursor pgtC FT SW:PGTC_SALTY (P37591) (397 aa) fasta scores: E(): 0, 94.0% FT id in 400 aa" FT /db_xref="GOA:P0A234" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/Swiss-Prot:P0A234" FT /protein_id="CAD07635.1" FT /translation="MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRT FT SGSLEQLLDTANAENVDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRSTSV FT AVAVSGFGLLINRSALAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQ FT QKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPNLAFT FT YFPYSAVSPTYVAVLKNSRHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPR FT AAQQQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRLKRPLP FT EIRALLTSVPVDAASSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEELK" FT misc_feature complement(169759..169953) FT /note="Pfam match to entry PF01547 SBP_bacterial_1, FT Bacterial extracellular solute-binding protein, score FT 18.40, E-value 0.00037" FT CDS 171067..172458 FT /transl_table=11 FT /gene="pgtP" FT /gene_synonym="STY2637" FT /product="phosphoglycerate transporter protein" FT /note="Similar to Salmonella typhimurium phosphoglycerate FT transporter protein pgtP SW:PGTP_SALTY (P12681) (406 aa) FT fasta scores: E(): 0, 95.8% id in 406 aa" FT /note="Fasta hit to UHPT_ECOLI (463 aa), 33% identity in FT 464 aa overlap" FT /note="Fasta hit to UHPC_ECOLI (439 aa), 31% identity in FT 442 aa overlap" FT /note="Paralogue of E. coli glpT (GLPT_ECOLI); Fasta hit to FT GLPT_ECOLI (452 aa), 37% identity in 456 aa overlap" FT /db_xref="GOA:Q8Z4Y1" FT /db_xref="HSSP:1PW4" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y1" FT /protein_id="CAD07636.1" FT /translation="MLTILKTGRSAHKVPPEKVQATYGRYRIQALLSVFLGYLAYYIVR FT NNFTLSTPYLKEQLDLSATQIGLLSSCMLIAYGISKGVMSSLADKASPKVFMACGLVLC FT VIVNVGLGFSSAFWIFAALVVFNGLFQGMGVGPSFITIANWFPRRERGRVGAFWNISHN FT VGGGIVAPIVGAAFAILGSEHWQSASYIVPACVAVIFALIVLVLGKGSPREEGLPSLEQ FT MMPEEKVILKTKNTAKAPENMSAWQIFCTYVLRNKNAWYISLVDVFVYMVRFGMISWLP FT IYLLTVKHFSKEQMSVAFLFFEWAAIPSTLLAGWLSDKLFKGRRMPLAMICMALIFVCL FT IGYWKSESLLMVTIFAAIVGCLIYVPQFLASVQTMEIVPSFAVGSAVGLRGFMSYIFGA FT SLGTSLFGVMVDKLGWYGGFYLLMGGIVCCILFCYLSHRGALELERQRQNALHNQDSLQ FT LADAQ" FT misc_feature 171148..172416 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -52.40, E-value 5.6e-05" FT misc_feature 171250..171282 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT misc_feature 171514..171564 FT /note="PS00942 glpT family of transporters signature" FT misc_feature 172117..172149 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(172697..172939) FT /transl_table=11 FT /gene="STY2638" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli P76521; Fasta hit to P76521 FT (80 aa), 68% identity in 80 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8XG09" FT /protein_id="CAD07637.1" FT /translation="MIYLWTFLAISILAVSGYIGQVMGAFSAVSSFTGMVILAALIYLL FT NVWLQDGDDIVSGLLLFLAPACGLIIRFMVGYGKR" FT RBS complement(172947..172953) FT /note="possible RBS" FT CDS 173460..174380 FT /transl_table=11 FT /gene="STY2639" FT /product="putative acyltransferase" FT /EC_number="2.3.1.-" FT /note="Fasta hit to HTRB_ECOLI (306 aa), 56% identity in FT 301 aa overlap" FT /note="Orthologue of E. coli DDG_ECOLI; Fasta hit to FT DDG_ECOLI (306 aa), 91% identity in 306 aa overlap. FT Contains hydrophobic, possible membrane-spanning region" FT /db_xref="GOA:Q8Z4Y0" FT /db_xref="InterPro:IPR011920" FT /db_xref="UniProtKB/TrEMBL:Q8Z4Y0" FT /protein_id="CAD07638.1" FT /translation="MFPQSKFSRAFLHPRYWLTWFGVGVLWLLVQLPYPVLRFLGTRTG FT KLARPFLKRRESIAQKNIELCFPTLSREEREKLIAENFHSLGMALLETGMAWFWPDSRV FT RKWFDVDGLDNLTRAQAQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNPLMEW FT VQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVENVATT FT NGTYVLSRLSGAAMLTVTMVRKSDNSGYRLYITPEMEGYPADENQAAAYMNKIIEKEIM FT RAPEQYLWIHRRFKTRPLGEASLYI" FT repeat_region complement(174866..175587) FT /note="IS200" FT CDS complement(174976..175434) FT /transl_table=11 FT /gene="tnpA" FT /gene_synonym="STY2640" FT /product="transposase for insertion sequence element IS200" FT /note="Identical to Salmonella typhimurium and Salmonella FT typhi transposase for insertion sequence element IS200 tnpA FT SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0, FT 100.0% id in 152 aa" FT /db_xref="GOA:P59697" FT /db_xref="InterPro:IPR002686" FT /db_xref="UniProtKB/Swiss-Prot:P59697" FT /protein_id="CAD07639.1" FT /translation="MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLC FT EWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNRE FT FWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK" FT misc_feature complement(175069..175380) FT /note="Pfam match to entry PF01797 Transposase_17, FT Transposase IS200 like, score 244.30, E-value 1.7e-69" FT CDS complement(175613..176851) FT /transl_table=11 FT /gene="STY2642" FT /product="putative aminotransferase" FT /note="Orthologue of E. coli YFDZ_ECOLI; Fasta hit to FT YFDZ_ECOLI (412 aa), 95% identity in 412 aa overlap" FT /note="Similar to Lactococcus lactis aromatic amino acid FT aminotransferase araT TR:Q9RAT0 (EMBL:AF146529) (391 aa) FT fasta scores: E(): 2e-31, 30.5% id in 354 aa and to many FT putative aminotransferases" FT /db_xref="GOA:Q8Z4X9" FT /db_xref="HSSP:1O4S" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q8Z4X9" FT /protein_id="CAD07640.1" FT /translation="MADSRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGN FT PDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISHWYQERYDVDIDPETEAIVT FT IGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELER FT AIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWK FT APSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGAFTPL FT QVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEQYAA FT MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAVRGIKTMFRADGV FT LPSHPKPVEASTE" FT misc_feature complement(175664..176836) FT /note="Pfam match to entry PF00155 aminotran_1, FT Aminotransferases class-I, score 151.30, E-value 1.7e-41" FT RBS complement(176857..176860) FT /note="possible RBS" FT CDS complement(177574..178539) FT /transl_table=11 FT /gene="STY2644" FT /gene_synonym="glk" FT /product="glucokinase" FT /EC_number="2.7.1.2" FT /note="Orthologue of E. coli glk (HXKG_ECOLI); Fasta hit to FT HXKG_ECOLI (321 aa), 94% identity in 321 aa overlap" FT /db_xref="GOA:P58618" FT /db_xref="InterPro:IPR003836" FT /db_xref="UniProtKB/Swiss-Prot:P58618" FT /protein_id="CAD07641.1" FT /translation="MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVV FT RVYLDEHGVSVEDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAV FT SMAIPMLKKEHLIQFGGGEPVDGKPIAVYGAGTGLGVAHLVHVDKRWISLPGEGGHVDF FT APNSEEEAMILEILRAEIGHVSAERVLSGPGLVNLYRAIVKSDNRLPENLRPKDITERA FT LADSCIDCRRALSLFCVIMGRFGGDLALTMGTFGGVYIAGGIVPRFLEFFKASGFRGGF FT EDKGRFKDYVHGIPVYLIVHDNPGLLGSGAHLRQTLGHIL" FT RBS complement(178550..178553) FT /note="possible RBS" FT RBS 178730..178737 FT /note="possible RBS" FT CDS 178743..179978 FT /transl_table=11 FT /gene="STY2645" FT /product="putative membrane protein" FT /note="Orthologue of E. coli P76526; Fasta hit to P76526 FT (418 aa), 80% identity in 408 aa overlap. Contains FT hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z4X8" FT /db_xref="InterPro:IPR001807" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4X8" FT /protein_id="CAD07642.1" FT /translation="MFHPRARTMLLLSLPALIIGVASSLVLIASMKVASVFQQFLWQRL FT PASIGIAYDSPFWIVGMLTLTGIVVGLIIRYSPGHAGPDPAIEPLISMPVSPSALPGLL FT LALIIGLAGGVSLGPEHPIMTINIALAAAFGSRLFPRITALDWTILASAGTIGALFGTP FT VAAALIFSQTLSGSNDIPMWDRLFAPLMAAAAGSLTTSLFFHPHFSLPIAHYTQMRLVD FT IASGAIVAAIAIAAGMVAVWCLPRLHELLHRLKNPVLILGIGGFILGILGVIGGPLTLF FT KGLDEMQQMAFSQTLGAGDYFTLAVVKLAALVIAAASGFRGGRIFPAVFIGAALGLMLH FT AHVEAVPAAITVSCAILGLVLVVTRDGWLSLFMAAVVVPDTNLLPLLCIVMLPAWLLLA FT GKPLLAANRHEP" FT CDS complement(179998..181650) FT /transl_table=11 FT /gene="STY2646" FT /product="putative decarboxylase" FT /note="Similar to many e.g. Enterobacter cloacae FT indole-3-pyruvate decarboxylase ipdC SW:DCIP_ENTCL (P23234) FT (552 aa) fasta scores: E(): 0, 66.7% id in 550 aa and FT Saccharomyces cerevisiae pyruvate decarboxylase isozyme 3 FT pdc6 or ygr087C SW:DCP3_YEAST (P26263) (563 aa) fasta FT scores: E(): 0, 38.1% id in 548 aa" FT /db_xref="GOA:Q8Z4X7" FT /db_xref="HSSP:1OVM" FT /db_xref="InterPro:IPR012110" FT /db_xref="UniProtKB/TrEMBL:Q8Z4X7" FT /protein_id="CAD07643.1" FT /translation="MQNPYTVADYLLDRLAGCGIGHLFGVPGDYNLQFLDHVIDHPTLR FT WVGCANELNAAYTADGYARMSGAGALLTTFGVGELSAINGIAGSYAEYVPVLHIVGAPC FT SAAQQRGELMHHTLGDGDFRHFYRMSQAISAASAILDEQNACFEIDRVLGEMLAARRPG FT YIMLPADVAKKTAIPPTEALALPVHEAQSGVETAFRYHARQCLMNSRRIALLADFLAGR FT FGLRPLLQRWMAETPIAHATLLMGKGLFDEQHPNFVGTYSAGASSKEVRQAIEDADRVI FT CVGTRFVDTLTAGFTQQLPAERTLEIQPYASRIGETWFNLPMAQAVSTLRELCLECAFA FT PPPTRSAGQPVRIDKGELTQESFWQTLQQCLKPGDIILVDQGTAAFGAAALSLPDGAEV FT VVQPLWGSIGYSLPAAFGAQTACPDRRVILIIGDGAAQLTIQEMGSMLRDGQAPVILLL FT NNDGYTVERAIHGAAQRYNDIASWNWTQIPPALNAAQQAECWRVTQAIQLAEVLERLAR FT PQRLSFIEVMLPKADLPELLRTVTRALEARNGG" FT misc_feature complement(180073..180579) FT /note="Pfam match to entry PF00205 TPP_enzymes, Thiamine FT pyrophosphate enzymes, score 185.00, E-value 6.8e-57" FT misc_feature complement(180346..180405) FT /note="PS00187 Thiamine pyrophosphate enzymes signature" FT misc_feature complement(180694..181608) FT /note="Pfam match to entry PF00205 TPP_enzymes, Thiamine FT pyrophosphate enzymes, score 300.40, E-value 8.9e-93" FT misc_feature complement(181573..181605) FT /note="PS00626 Regulator of chromosome condensation (RCC1) FT signature 2" FT RBS complement(181660..181665) FT /note="possible RBS" FT CDS 181830..182828 FT /transl_table=11 FT /gene="STY2647" FT /product="putative ion-channel protein" FT /note="Similar to ion channels e.g. Arabidopsis thaliana K+ FT channel protein TR:Q39151 (EMBL:L40948) (328 aa) fasta FT scores: E(): 0, 38.7% id in 302 aa and Homo sapiens FT voltage-gated potassium channel beta-2 subunit kcnab2 or FT kcna2b or kv-beta-2 TR:Q13303 (EMBL:U33429) (367 aa) fasta FT scores: E(): 0, 37.0% id in 324 aa" FT /note="Fasta hit to YAJO_ECOLI (324 aa), 33% identity in FT 303 aa overlap" FT /note="Orthologue of E. coli Q46851; Fasta hit to Q46851 FT (346 aa), 59% identity in 337 aa overlap" FT /db_xref="GOA:Q8Z4X6" FT /db_xref="HSSP:1LQA" FT /db_xref="InterPro:IPR005399" FT /db_xref="UniProtKB/TrEMBL:Q8Z4X6" FT /protein_id="CAD07644.1" FT /translation="MIYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENS FT RALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELVISTKAGYTMWD FT GPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKAL FT YVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLTLLQEKGVGSIAFS FT PLAGGQLTDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMA FT LAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAECAEIDAILEGRF" FT misc_feature 182181..182339 FT /note="Pfam match to entry PF00248 aldo_ket_red, Aldo/keto FT reductase family, score 19.50, E-value 0.00015" FT RBS 182929..182934 FT /note="possible RBS" FT CDS 182942..183268 FT /transl_table=11 FT /gene="STY2648" FT /product="conserved hypothetical protein" FT /note="Fasta hit to YAAX_ECOLI (98 aa), 49% identity in 105 FT aa overlap" FT /note="Orthologue of E. coli YPEC_ECOLI; Fasta hit to FT YPEC_ECOLI (108 aa), 92% identity in 108 aa overlap" FT /db_xref="InterPro:IPR019638" FT /db_xref="UniProtKB/TrEMBL:Q8XFD1" FT /protein_id="CAD07645.1" FT /translation="MFRSLILAAALLAFTPLAANAGEITLLPSIKLQIGDRDDYGNYWD FT GGRWRDRDYWHNHYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGRGRGH FT KHHH" FT CDS complement(183329..184570) FT /transl_table=11 FT /gene="mntH" FT /gene_synonym="STY2649" FT /product="manganese transport protein MntH" FT /note="Similar to Salmonella typhimurium manganese FT transport protein MntH mntH SW:MNTH_SALTY (Q9RPF4) (413 aa) FT fasta scores: E(): 0, 99.8% id in 413 aa" FT /note="Orthologue of E. coli MNTH_ECOLI; Fasta hit to FT MNTH_ECOLI (412 aa), 94% identity in 412 aa overlap" FT /db_xref="GOA:Q8Z4X5" FT /db_xref="InterPro:IPR001046" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4X5" FT /protein_id="CAD07646.1" FT /translation="MTDNRVENSSGRAARKLRLALMGPAFIAAIGYIDPGNFATNIQAG FT ASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEII FT AMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLLLF FT VAAAYIVELFFSQPDMAQLGKGMVIPALPNPEAVFLAAGVLGATIMPHVIYLHSSLTQH FT LHGGTRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGIADLDQAYLTLEP FT LLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFHIPLWVRRTITMLPSFIVIL FT MGLDPTRILVMSQVLLSFGIALALVPLLIFTSNATLMGELVNTRRVKQIGWIIVVLVVA FT LNIWLLVGTVMGLS" FT misc_feature complement(183419..184459) FT /note="Pfam match to entry PF01566 Nramp, Natural FT resistance-associated macrophage protein, score 663.80, FT E-value 9e-196" FT RBS complement(184577..184580) FT /note="possible RBS" FT RBS 184904..184907 FT /note="possible RBS" FT CDS 184913..186115 FT /transl_table=11 FT /gene="STY2650" FT /gene_synonym="nupC" FT /product="nucleoside permease NupC" FT /note="Fasta hit to YEIM_ECOLI (416 aa), 30% identity in FT 415 aa overlap" FT /note="Fasta hit to YEIJ_ECOLI (416 aa), 32% identity in FT 415 aa overlap" FT /note="Orthologue of E. coli nupC (NUPC_ECOLI); Fasta hit FT to NUPC_ECOLI (400 aa), 98% identity in 400 aa overlap" FT /db_xref="GOA:Q8Z4X4" FT /db_xref="InterPro:IPR011657" FT /db_xref="UniProtKB/TrEMBL:Q8Z4X4" FT /protein_id="CAD07647.1" FT /translation="MDRVLHFVLALAVVAVLALLVSSDRKKIRIRYVIQLLVIEVLLAW FT FFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISAL FT IGILQHIRVLPVVIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKMSR FT NRMYTMAATAMSTVSMSIVGAYMTMLDPKYVVAALVLNMFSTFIVLSLINPYTVDASEE FT NIQMSNLHEGQSFFEMLGEYILAGFKVAIIIAAMLIGFIALIAALNALFATVTGWFGYS FT ISFQGILGYIFYPVAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAE FT GIISVFLVSFANFSSIGIIAGAIKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALV FT L" FT misc_feature 184916..186112 FT /note="Pfam match to entry PF01773 Nucleoside_tra2, Na+ FT dependent nucleoside transporter, score 778.70, E-value FT 2.3e-230" FT CDS complement(186168..188357) FT /transl_table=11 FT /gene="STY2651" FT /gene_synonym="yfeA" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yfeA (P76529); Fasta hit to FT P76529 (768 aa), 69% identity in 722 aa overlap. N-terminal FT half contains hydrophobic, probable membrane-spanning FT regions" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q8Z4X3" FT /protein_id="CAD07648.1" FT /translation="MPDKCNVLKNIKIFLLAFCLTVPAILLSRLISPRATIDSSYIFLA FT WLPLCVMFSVLFLFGRRGVAPMVGGMMLTNEWNFHLPLPQAMVLLFCQTFPVLLVCAIV FT RWQLGARWRYGIPNQGIWLRVFWLGLMTPFGIKISMHLAGHYLAFPVTISTFFGTGTAI FT FSIVDLLSLISAALIFTLFFYYPLRMIVSPHYMRIFWRRDVAPYLAKEKRLFTLLWFAT FT LATLLAVLCTPFETKYIAGYLVPVLFIGFTIGVGKISYPLLNFSWALTALFLLSYNRNF FT LQGVGSEYSLAFILSVLISFSICLLYMARINQRSEWLNRQWHSQALTDPLTQLPNLRAL FT GQFLLQDAGQSVCYLRMENLEFLSRHYGMQMRVHCEREVFRVLQPLLLEKEKIFHLPGS FT ELLLVLTGPETEARLQYMLNVLNNRKIYWNNTGLDMEYGASWGTFDGRQETLQPLLGQL FT SWLAEQSCSHRRVLALTQSIEAASGQTTERVLRLQKIRQALERGALVLYAQPIRDAQGK FT GYDEILTRLRCDDGIMMPNQFIPLIAQFNLSVRFDMQVMEALLQWLSAHPSAEQGARFS FT VNLMPLTLLQKETASRIMQLFKRYGVPPASVIIEITEEQAFSHSEISMHNINQLRKFGL FT KIAIDDFGTGYANYERLKRLKADIIKIDGCFVKDILTDSLDAMIVKSITDLAKAKSLSV FT VAEFVETPAQRDLLLQLGVHSLQGYLIGRPRPLGK" FT misc_feature complement(186171..186899) FT /note="Pfam match to entry PF00563 DUF2, Domain of unknown FT function 2, score 173.70, E-value 3e-48" FT tRNA complement(188548..188623) FT /note="tRNA Ala anticodon GGC, Cove score 86.51" FT tRNA complement(188666..188741) FT /note="tRNA Ala anticodon GGC, Cove score 86.51" FT CDS 188963..189325 FT /transl_table=11 FT /gene="STY2652" FT /gene_synonym="yfeC" FT /product="conserved hypothetical protein" FT /note="Fasta hit to YFED_ECOLI (130 aa), 35% identity in FT 126 aa overlap" FT /note="Orthologue of E. coli yfeC (YFEC_ECOLI); Fasta hit FT to YFEC_ECOLI (114 aa), 78% identity in 115 aa overlap" FT /db_xref="GOA:Q8XFP2" FT /db_xref="InterPro:IPR010749" FT /db_xref="UniProtKB/TrEMBL:Q8XFP2" FT /protein_id="CAD07649.1" FT /translation="MFKERMTPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKAR FT LVHVNEQVREYIRSAERSVDHHADTFTPASNASLEALLMTLAKEMTSSEQKQFTSLLVR FT EGITGLLQRLGIRDSK" FT CDS 189327..189719 FT /transl_table=11 FT /gene="STY2653" FT /gene_synonym="yfeD" FT /product="conserved hypothetical protein" FT /note="Fasta hit to YFEC_ECOLI (114 aa), 40% identity in FT 124 aa overlap" FT /note="Orthologue of E. coli yfeD (YFED_ECOLI); Fasta hit FT to YFED_ECOLI (130 aa), 70% identity in 129 aa overlap" FT /db_xref="GOA:Q8Z4X2" FT /db_xref="InterPro:IPR010749" FT /db_xref="UniProtKB/TrEMBL:Q8Z4X2" FT /protein_id="CAD07650.1" FT /translation="MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGR FT ARLIHIDASVREFILNIPAFRKLPAFYQAEEAFAEYANATHSHAYRQIIDAVENMSAQE FT QEKLALFLSREGIRGFLTRLGINEAD" FT CDS complement(189763..191187) FT /transl_table=11 FT /gene="STY2654" FT /gene_synonym="gltX" FT /product="glutamyl-tRNA synthetase" FT /EC_number="6.1.1.17" FT /note="Orthologue of E. coli gltX (SYE_ECOLI); Fasta hit to FT SYE_ECOLI (471 aa), 95% identity in 436 aa overlap" FT /db_xref="GOA:P0A2K4" FT /db_xref="HSSP:1J09" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:P0A2K4" FT /protein_id="CAD07651.1" FT /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARHHGGEFVLRIEDTD FT LERSTPEAIEAIMDGMNWLNLEWDEGPYFQTKRFDRYNAVIDEMLEAGTAYKCYCSKER FT LEQLREDQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQDGSVIFDDQIRGPIEFS FT NQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALNAPVP FT MYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSSGDQEIFTREE FT MIKLFSLGAVSKSASAFNTDKLLWLNHHYINTLAPEYVATHLQWHIEQENIDTRNGPQL FT AELVKLLGERCKTLKEMAQSCRYFYEDFSEFDADAAKKHLRPVARQPLEVVRDKLSAIT FT DWSAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGSRLRWMSPYMRLVKPAALSVST FT KRWALSPSVKVSSNAS" FT misc_feature complement(189880..191184) FT /note="Pfam match to entry PF00749 tRNA-synt_1c, tRNA FT synthetases class I (E and Q), score 771.20, E-value FT 4e-228" FT misc_feature complement(191128..191163) FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature" FT tRNA 191446..191521 FT /note="tRNA Val anticodon TAC, Cove score 90.02" FT tRNA 191567..191642 FT /note="tRNA Val anticodon TAC, Cove score 94.34" FT tRNA 191684..191759 FT /note="tRNA Val anticodon TAC, Cove score 94.34" FT tRNA 191764..191839 FT /note="tRNA Lys anticodon TTT, Cove score 99.54" FT CDS complement(192002..192886) FT /transl_table=11 FT /gene="STY2655" FT /gene_synonym="xapR" FT /product="xanthosine operon transcriptional regulator" FT /note="Fasta hit to YCJZ_ECOLI (299 aa), 31% identity in FT 264 aa overlap" FT /note="Fasta hit to YNFL_ECOLI (297 aa), 36% identity in FT 284 aa overlap" FT /note="Orthologue of E. coli xapR (XAPR_ECOLI); Fasta hit FT to XAPR_ECOLI (294 aa), 81% identity in 293 aa overlap" FT /db_xref="GOA:Q8Z4X0" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q8Z4X0" FT /protein_id="CAD07652.1" FT /translation="MERAHRIDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKEL FT EQQLGTLLFIRHSRSVALTHAGKVLMEESRRLLANANQALARVEQIGRGEAGRIELGVV FT GTALWGRMRPAMRHFLKANPNVEVLFREKSPGMQMALLERRELDAGIWRMAIEPAVGFT FT SIRLHESAFMVAVPEDHDLASRDSVPLSALRNEYFVTLPSVHSDWGFLQRVCQQAGFSP FT MIIREVVEPQTVLAMISMGIGITLMADGYAQMSWPGVVFRPLEERIPADLYIVYDQQQA FT TPALEKLVAALTV" FT misc_feature complement(192434..192862) FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 182.60, E-value 6.4e-51" FT misc_feature complement(192728..192820) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT RBS complement(192897..192900) FT /note="possible RBS" FT CDS complement(193155..194411) FT /transl_table=11 FT /gene="STY2657" FT /gene_synonym="xapB" FT /product="xanthosine permease" FT /note="Fasta hit to YEGT_ECOLI (425 aa), 30% identity in FT 419 aa overlap" FT /note="Fasta hit to NUPG_ECOLI (418 aa), 58% identity in FT 418 aa overlap" FT /note="Orthologue of E. coli xapB (XAPB_ECOLI); Fasta hit FT to XAPB_ECOLI (418 aa), 89% identity in 418 aa overlap" FT /db_xref="GOA:Q8Z4W9" FT /db_xref="InterPro:IPR004740" FT /db_xref="UniProtKB/TrEMBL:Q8Z4W9" FT /protein_id="CAD07653.1" FT /translation="MGITSRLKVMSFLQYFIWGSWLVTLGSYMINTLDFTGANVGMVYS FT SKGLAAIIMPGIMGIIADKWLRAERAYMLCHLVCAGALLYATTVTDPQTMFWVMLVNAM FT AYMPTIALSNSVSYSCLAKAGQDPVTSFPPVRVFGTIGFIVAMWTVSLMGLELSSAQLY FT IASGASLLLALYALTLPKIPVAEKKANTTLVSKLGLDAFVLFKNPRMAIFFLFAMMLGA FT VLQITNVFGNPFLHDFARNPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLKRFGIK FT TVMLMSMLAWTLRFGFFAFGDPSPFGFVLLLLSMIVYGCAFDFFNISGSVFVEQEVDSS FT IRASAQGLFMTMVNGVGAWIGSLLSGMAVDYFSIDGVKDWQTIWLVFAAYALALAVIFA FT LFFKYQHHPEKLSTKSLAH" FT RBS complement(194419..194423) FT /note="possible RBS" FT CDS complement(194466..195299) FT /transl_table=11 FT /gene="STY2658" FT /gene_synonym="xapA" FT /product="xanthosine phosphorylase" FT /EC_number="2.4.2.-" FT /note="Orthologue of E. coli xapA (XAPA_ECOLI); Fasta hit FT to XAPA_ECOLI (277 aa), 88% identity in 277 aa overlap" FT /db_xref="GOA:Q8Z4W8" FT /db_xref="HSSP:1LVU" FT /db_xref="InterPro:IPR001369" FT /db_xref="UniProtKB/TrEMBL:Q8Z4W8" FT /protein_id="CAD07654.1" FT /translation="MPHALFSHNPEYCIDIIHAHKPAFTPRVAFILGSGLGALADQIED FT AVAISYEKLPGFPVSTVHGHAGELVLGHLAGVPVACMKGRGHFYEGRGMAVMTDAIRTL FT KLLGCEVLFCTNAAGSLRPEVGPGSLVALSDHINTMPGTPMVGPNDDRYGDRFFSLANA FT YDADYRAMLQSVAAEKGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVI FT SARHCGLKVVAVSAITNLAEGLGDVKLSHAQTLAAAELSRQNFINLICGFLRKLA" FT misc_feature complement(194583..195218) FT /note="Pfam match to entry PF00896 Mtap_PNP, phosphorylases FT family 2, score 408.30, E-value 7.3e-119" FT RBS complement(195305..195309) FT /note="possible RBS" FT CDS 195555..196316 FT /transl_table=11 FT /gene="STY2659" FT /gene_synonym="yfeN" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yfeN (YFEN_ECOLI); Fasta hit FT to YFEN_ECOLI (254 aa), 85% identity in 254 aa overlap" FT /db_xref="GOA:Q8Z4W7" FT /db_xref="InterPro:IPR018013" FT /db_xref="UniProtKB/TrEMBL:Q8Z4W7" FT /protein_id="CAD07655.1" FT /translation="MKKILTLTLSSLLIIPALTHAEFKGGFADIGLHYLDWTSDTTEKT FT SKKSHKDDFGYLELEGGANFSWGEMYGFFDWENFYNGRHAKPSSEQRYTFKNTNRIYLG FT DTGLNLYLHAYGTYGSPHRANFHDDMFLYGLGYNFTGNGYWFKPFFAKRYTDQTYYTGD FT NGYVLGWVAGYSFSLGSEKFSVTNWNEYEFDRDASYAAGNGGKDGINGAVALWWNATPH FT LTAGVQYRYADNKLGESFLQDGIIYSIKYLF" FT CDS complement(196378..197304) FT /transl_table=11 FT /gene="STY2660" FT /product="putative transcriptional regulator" FT /note="Fasta hit to YCAN_ECOLI (302 aa), 30% identity in FT 308 aa overlap" FT /note="Fasta hit to YBHD_ECOLI (338 aa), 33% identity in FT 284 aa overlap" FT /note="Orthologue of E. coli YFER_ECOLI; Fasta hit to FT YFER_ECOLI (308 aa), 79% identity in 308 aa overlap" FT /db_xref="GOA:Q8Z4W6" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q8Z4W6" FT /protein_id="CAD07656.1" FT /translation="MNYSLRQLRIFITVAQAKSFSRAGDRIGLSQSAVSHSVKELERQT FT GVRLLDRTTREVVLTEAGQQLATRLERVLDELNSILRDAGRVGTQLTGTVRVAASQTIS FT AHLIPQCIAQSNSLYPAIDFVLHDRPQQWVLESIRQGEVDFGIVIDPGAAVDLQCEAIL FT SEPFLLLCRQDHPLAHQEWVSWQDLKQASLVLQDYASGSRPLIDAALAHFAIEADIVQE FT IGHPATLFPRVEAGIGISVLPALALPLPQGSHLQVKRLTPVVERQLMLARRKNRSLSTA FT AQALWDVVRTQASELTAARAKDPLYQL" FT misc_feature complement(196864..197292) FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 155.50, E-value 8.9e-43" FT misc_feature complement(197158..197250) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT RBS 197384..197388 FT /note="possible RBS" FT CDS 197394..198392 FT /transl_table=11 FT /gene="STY2661" FT /gene_synonym="yfeH" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yfeH (YFEH_ECOLI); Fasta hit FT to YFEH_ECOLI (332 aa), 91% identity in 332 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q93IN6" FT /db_xref="InterPro:IPR016833" FT /db_xref="UniProtKB/TrEMBL:Q93IN6" FT /protein_id="CAD07657.1" FT /translation="MKLFRILDPFTLTLITVVLLASFFPAEGGFVPVVEGITTAAIALL FT FFMHGAKLSREAIIAGGSHWRLHLWVMCSTFVLFPVLGVLFAWWAPVNVDPMLYSGFLY FT LCILPATVQSAIAFTSLAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNIHGAQGSLEE FT VGKIMLQLLLPFVLGHLSRPWIGNWVARNKKWIAKTDQTSILLVVYSAFSEAVVNGIWH FT KVGWGSLLFIVVVSLILLAIVIAINVFVARKCGFNKADEITIVFCGSKKSLANGIPMAN FT ILFPTSVLGMMVLPLMIFHQIQLMVCAGLARRYKRQTEKLQAQQESRAAKA" FT misc_feature 197514..198050 FT /note="Pfam match to entry PF01758 SBF, Sodium Bile acid FT symporter family, score -14.70, E-value 0.0024" FT CDS complement(198389..198616) FT /transl_table=11 FT /gene="ypeB" FT /gene_synonym="STY2662" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli ypeB (YPEB_ECOLI); Fasta hit FT to YPEB_ECOLI (72 aa), 94.4% identity in 72 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8Z4W5" FT /protein_id="CAD07658.1" FT /translation="MPEMEKEQLLEIANTVMPFGKYQGRRLIDLPEEYLLWFARKDQFP FT AGKLGELMQITLLIKTEGLTQLVQPLKRPL" FT CDS complement(198609..200624) FT /transl_table=11 FT /gene="STY2663" FT /gene_synonym="ligA" FT /product="DNA ligase" FT /EC_number="6.5.1.2" FT /note="Orthologue of E. coli ligA (DNLJ_ECOLI); Fasta hit FT to DNLJ_ECOLI (671 aa), 93% identity in 671 aa overlap" FT /db_xref="GOA:Q8Z4W4" FT /db_xref="HSSP:1B04" FT /db_xref="InterPro:IPR004149" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4W4" FT /protein_id="CAD07659.1" FT /translation="MEPIEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELREL FT EAQRPDLITPDSPTQRVGAAPLTAFNQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKS FT TENVIWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGDN FT IPARLEVRGEVFLPQTGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTF FT FCYGVGILEGGELPDTHLGRLLQFKAWGLPVSDRVTLCDSPQAVLDFYHNVEKDRPTLG FT FDIDGVVIKVNSLALQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPV FT ARLEPVQVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEET FT RPIVFPTHCPVCGSDVERVEGEAVTRCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKI FT IDQLVEREYVHTPADLFRLTAGKLTGLDRMGPKSAQNVVNALEKAKATTFARFLYALGI FT REVGEATAAGLAAYFGTLEALQAATIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQL FT LAEGVHWPAPVVINAQEIDSPFAGKTVVLTGSLSQMSRDDAKARLVALGAKVAGSVSKK FT TDLVIAGEAAGSKLAKAQELGITVIDEAEMIRLLGA" FT misc_feature complement(198618..198848) FT /note="Pfam match to entry PF00533 BRCT, BRCA1 C Terminus FT (BRCT) domain, score 30.10, E-value 5e-05" FT misc_feature complement(198936..199025) FT /note="Pfam match to entry PF00633 HHH, Helix-hairpin-helix FT motif., score 38.30, E-value 1.7e-07" FT misc_feature complement(199281..200621) FT /note="Pfam match to entry PF01653 DNA_ligase_N, FT NAD-dependent DNA ligase, score 1017.90, E-value 2.2e-302" FT misc_feature complement(199587..199634) FT /note="PS01056 NAD-dependent DNA ligase signature 2" FT misc_feature complement(200193..200282) FT /note="PS01055 NAD-dependent DNA ligase signature 1" FT CDS complement(200696..201682) FT /transl_table=11 FT /gene="STY2664" FT /product="cell division protein" FT /note="Orthologue of E. coli ZIPA_ECOLI; Fasta hit to FT ZIPA_ECOLI (328 aa), 81% identity in 335 aa overlap" FT /db_xref="GOA:P0A2N7" FT /db_xref="HSSP:1F46" FT /db_xref="InterPro:IPR007449" FT /db_xref="UniProtKB/Swiss-Prot:P0A2N7" FT /protein_id="CAD07660.1" FT /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMK FT SKRDDDSYDDDVEEDEGVGEVRVHRVNHAPGQSQEHDAPRQSPQHQYQPPYASAQPRPA FT APPQPQAPMQQPVQQPVQPAPQPQQVQPSAPPVQPPQQQPAPPSQAPQPVAQPAPPPSA FT QTFQPAEPVVEAEPVVEEAPVVEKPQRKEAVIIMNVAAHHGSELNGEVLLNSIQQSGFK FT FGDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSYGDALQN FT FKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDRIREVMDANA" FT RBS 201896..201901 FT /note="possible RBS" FT CDS 201914..202675 FT /transl_table=11 FT /gene="STY2665" FT /gene_synonym="cysZ" FT /product="putative sulfate transport protein CysZ" FT /note="Similar to Salmonella typhimurium CysZ protein cysZ FT SW:CYSZ_SALTY (P12673) (253 aa) fasta scores: E(): 0, 99.6% FT id in 253 aa" FT /note="Orthologue of E. coli cysZ (CYSZ_ECOLI); Fasta hit FT to CYSZ_ECOLI (253 aa), 89% identity in 253 aa overlap" FT /db_xref="GOA:Q8Z4W3" FT /db_xref="InterPro:IPR007496" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4W3" FT /protein_id="CAD07661.1" FT /translation="MVSSSTTVPRSGVYYFSQGWKLVTLPGIRRFVILPLLVNIVLMGG FT AFWWLFTQLDAWIPSLMSHVPDWLQWLSYLLWPIAVISVLLVFGYFFSTLANWIAAPFN FT GLLAEQLEARLTGATPPDTGILGIMKDVPRIMKREWQKLAWYLPRAIVLLVLYFIPGIG FT QTIAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKTMRAALRTQKVANMQFGALTSLFTMI FT PVLNLFIMPVAVCGATAMWVDCWRAKHALWK" FT RBS 203036..203041 FT /note="possible RBS" FT CDS 203048..204019 FT /transl_table=11 FT /gene="STY2666" FT /gene_synonym="cysK" FT /product="cysteine synthase A" FT /EC_number="4.2.99.8" FT /note="Similar to Salmonella typhimurium cysteine synthase FT A cysK SW:CYSK_SALTY (P12674) (322 aa) fasta scores: E(): FT 0, 99.1% id in 322 aa" FT /note="Fasta hit to CYSM_ECOLI (303 aa), 43% identity in FT 307 aa overlap" FT /note="Orthologue of E. coli cysK (CYSK_ECOLI); Fasta hit FT to CYSK_ECOLI (322 aa), 97% identity in 322 aa overlap" FT /db_xref="GOA:P0A1E4" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/Swiss-Prot:P0A1E4" FT /protein_id="CAD07662.1" FT /translation="MSKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRI FT GANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLL FT KALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWE FT DTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKP FT GPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAA FT LKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ" FT misc_feature 203069..203953 FT /note="Pfam match to entry PF00291 PALP, FT Pyridoxal-phosphate dependent enzyme, score 433.20, E-value FT 2.2e-126" FT misc_feature 203138..203194 FT /note="PS00901 Cysteine synthase/cystathionine FT beta-synthase P-phosphate attachment site" FT misc_feature 204403..204633 FT /note="Pfam match to entry PF00381 PTS-HPr, PTS HPr FT component phosphorylation sites, score 159.20, E-value FT 7.1e-44" FT CDS 204403..204660 FT /transl_table=11 FT /gene="STY2667" FT /gene_synonym="ptsH" FT /product="phosphocarrier protein HPr" FT /note="Fasta hit to PTSO_ECOLI (90 aa), 30% identity in 79 FT aa overlap" FT /note="Orthologue of E. coli ptsH (PTHP_ECOLI); Fasta hit FT to PTHP_ECOLI (85 aa), 100% identity in 85 aa overlap" FT /db_xref="GOA:P0AA08" FT /db_xref="InterPro:IPR002114" FT /db_xref="UniProtKB/Swiss-Prot:P0AA08" FT /protein_id="CAD07663.1" FT /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAK FT SLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE" FT misc_feature 204439..204462 FT /note="PS00369 PTS HPR component histidine phosphorylation FT site signature" FT misc_feature 204517..204564 FT /note="PS00589 PTS HPR component serine phosphorylation FT site signature" FT CDS 204709..206437 FT /pseudo FT /transl_table=11 FT /gene="STY2668" FT /product="phosphoenolpyruvate-protein phosphotransferase FT (pseudogene)" FT /EC_number="2.7.3.9" FT /note="Similar to many e.g. Escherichia coli FT phosphoenolpyruvate-protein phosphotransferase SW:PT1_ECOLI FT (P08839) (575 aa) fasta scores: E(): 0, 93.5% id in 368 aa FT and Salmonella typhimurium phosphoenolpyruvate-protein FT phosphotransferase ptsI SW:PT1_SALTY (P12654) (575 aa) FT fasta scores: E(): 0, 97.0% id in 368 aa. Contains a FT frameshift at codon 353. The sequence has been checked and FT is believed to be correct" FT misc_feature 205177..205764 FT /note="Pfam match to entry PF00391 PEP-utilizers, FT PEP-utilizing enzymes, score 382.40, E-value 4.4e-111" FT misc_feature 205258..205293 FT /note="PS00370 PEP-utilizing enzymes phosphorylation site FT signature" FT misc_feature 205787..206221 FT /note="Pfam match to entry PF00391 PEP-utilizers, FT PEP-utilizing enzymes, score 312.10, E-value 6.6e-90" FT misc_feature 206048..206104 FT /note="PS00742 PEP-utilizing enzymes signature 2" FT RBS 206467..206471 FT /note="possible RBS" FT CDS 206478..206987 FT /transl_table=11 FT /gene="STY2670" FT /gene_synonym="crr" FT /product="pts system, glucose-specific IIA component" FT /note="Identical to Salmonella typhimurium pts system, FT glucose-specific iia component crR SW:PTGA_SALTY (P02908) FT (168 aa) fasta scores: E(): 0, 100.0% id in 168 aa" FT /note="Orthologue of E. coli crr (PTGA_ECOLI); Fasta hit to FT PTGA_ECOLI (168 aa), 98% identity in 168 aa overlap" FT /db_xref="GOA:P0A284" FT /db_xref="HSSP:1GLC" FT /db_xref="InterPro:IPR001127" FT /db_xref="UniProtKB/Swiss-Prot:P0A284" FT /protein_id="CAD07665.1" FT /translation="MGLFDKLKSLVSDDKKDTGTIEIVAPLSGEIVNIEDVPDVVFAEK FT IVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGEGF FT KRIAEEGQRVKVGDPVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETP FT VIRIKK" FT misc_feature 206592..206906 FT /note="Pfam match to entry PF00358 PTS_EIIA_1, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 1, score 233.40, E-value 3.2e-66" FT misc_feature 206730..206768 FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1" FT misc_feature 207006..207038 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(207137..207376) FT /transl_table=11 FT /gene="STY2671" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="InterPro:IPR016160" FT /db_xref="UniProtKB/TrEMBL:Q8Z4W2" FT /protein_id="CAD07666.1" FT /translation="MKSYRLVVRQQGRIVGHFETSGLDALEDICVARAMFGITGGYQCE FT LQVSDSERRILESGPDGMKILMREKCFRPVTSQL" FT CDS complement(207373..208239) FT /transl_table=11 FT /gene="STY2672" FT /gene_synonym="pdxK" FT /product="pyridoxine kinase" FT /EC_number="2.7.1.35" FT /note="Similar to Escherichia coli pyridoxine kinase FT SW:PDXK_ECOLI (P40191) (283 aa) fasta scores: E(): 0, 62.0% FT id in 187 aa, and to Salmonella typhimurium pyridoxine FT kinase pdxK SW:PDXK_SALTY (P40192) (287 aa) fasta scores: FT E(): 0, 98.9% id in 187 aa." FT /db_xref="GOA:Q8Z4W1" FT /db_xref="HSSP:1LHP" FT /db_xref="InterPro:IPR004625" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4W1" FT /protein_id="CAD07667.1" FT /translation="MGQESDIQSVLFDDNHRALQTDIVAVQSQVVYGSVGNSIAVPAIK FT AQGLRVTAVPTVLFSNTPHYKTFYGGIIPAEWFAGYLTALNERDALRELKAITTGNMGS FT ADQIVLLSKWLMAIRASHPEVCILVDPVIGDTDSGMYVQAEIPQAYRTHLLPQAQGLTP FT NVFELEMLSGKPCRTLEEAVAAAQSLLSDTLKWVVITSAPGESLETITVAVVTAQVVEV FT FAHPRVATELKGTGDLFCAELVSGIVQGKKLTTAAKDAAQRVLEVMTWTQQCGCDELIL FT PPAGEAR" FT RBS complement(207381..207385) FT /note="possible RBS" FT CDS 208322..209614 FT /transl_table=11 FT /gene="ptsJ" FT /gene_synonym="STY2674" FT /product="putative transcriptional regulator" FT /note="Similar to Salmonella typhimurium putative FT transcriptional regulatory protein PtsJ ptsJ SW:PTSJ_SALTY FT (P40193) (430 aa) fasta scores: E(): 0, 97.9% id in 430 aa" FT /db_xref="GOA:Q8Z4W0" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q8Z4W0" FT /protein_id="CAD07668.1" FT /translation="MIDGKTANEIFDSIRQHIIAGTLRAKDSLPPVRELASELKVNRNT FT VAAAYKRLITAGLAQSLGRNGTVIKGSPSPVALEGGDPHTPLHDLSGGNPDPQRLPDLS FT RYFARLSRTPHLYGDAPVSPELHAWAARWLRDATPVAGEIDITSGAIDAIERLLCAHLL FT PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDSEGMQPEKLEQALNQGARAVILTPRAH FT NPTGCSLSARRAAALQNILARYPQVLVIIDDHFALLSSSPWQPVIAQTTQHWAVIRSVS FT KALGPDLRLAIVASDSSTSAKLRLRLNAGSQWVSHLLQDLVYACLTDPEYQHRLAQTRL FT FYATRQQKLARALQQYGIAISPGDGVNAWLPLDTHSQATAFTLAKSGWLVREGEAFGVS FT APSHGLRITLSTLNDGEINTLAADIHQALNR" FT misc_feature 208349..208528 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 85.60, E-value FT 6.4e-25" FT misc_feature 208406..208480 FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature" FT RBS 209616..209620 FT /note="possible RBS" FT CDS 209629..210348 FT /transl_table=11 FT /gene="STY2675" FT /product="putative amidotransferase" FT /note="Similar, in part, to Salmonella typhimurium LT2 FT hypothetical protein yfeJ SW:YFEJ_SALTY (P40194) (170 aa) FT fasta scores: E(): 0, 89.0% id in 155 aa. The similarity FT ends due to a deletion in S. typhimurium with respect to S. FT typhi. Similar to Zymomonas mobilis hypothetical protein FT TR:Q9RQD2 (EMBL:AF117351) (251 aa) fasta scores: E(): 0, FT 53.1% id in 239 aa and Pseudomonas aeruginosa probable FT glutamine amidotransferase PA0531 TR:AAG03920 FT (EMBL:AE004489) (238 aa) fasta scores: E(): 2.1e-16, 31.9% FT id in 238 aa" FT /db_xref="GOA:Q8Z4V9" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V9" FT /protein_id="CAD07669.1" FT /translation="MRVHFVIHESFESAGAYLKWAEDRGYTISWSRVYAGEALPPNADE FT FDMLVVFGGPQSPRTTREECPYFDSQAEQHLINQAISARKIVVGICLGSQLIGEALGAK FT VCQSPEKEIGHYPIVLTEAGQQHPLFNHFGSPLIVGHWHNDMPGLTDQAIILATSEGCP FT RQIVQYGNFVYGFQCHMEFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRAWNYQQMN FT EKLWRFLDELTLAHSQK" FT misc_feature 209653..210222 FT /note="Pfam match to entry PF00117 GATase, Glutamine FT amidotransferase class-I, score -0.10, E-value 3.4e-06" FT RBS 210388..210393 FT /note="possible RBS" FT CDS 210407..210784 FT /transl_table=11 FT /gene="STY2676" FT /product="putative exported protein" FT /note="Similar to Escherichia coli hypothetical protein FT yfeK SW:YFEK_ECOLI (Q47702; P77418) (124 aa) fasta scores: FT E(): 0, 85.7% id in 119 aa and Salmonella typhimurium FT hypothetical protein yfeK SW:YFEK_SALTY (P40195) (120 aa) FT fasta scores: E(): 0, 95.0% id in 119 aa. Contains a FT probable N-terminal signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V8" FT /protein_id="CAD07670.1" FT /translation="MKKDFTMKKIVCAVVALLLTLPAWAKLNAHEEARINAMLNVLAQK FT KDLTFVRNGDAHNCEEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPG FT KSDENAQPYLHALIAETDKTL" FT CDS complement(210817..211728) FT /transl_table=11 FT /gene="STY2677" FT /gene_synonym="cysM" FT /product="cysteine synthase B" FT /EC_number="4.2.99.8" FT /note="Similar to Salmonella typhimurium LT2 cysteine FT synthase B cysM SW:CYSM_SALTY (P29848) (303 aa) fasta FT scores: E(): 0, 98.7% id in 303 aa" FT /note="Fasta hit to CYSK_ECOLI (322 aa), 44% identity in FT 307 aa overlap" FT /note="Orthologue of E. coli cysM (CYSM_ECOLI); Fasta hit FT to CYSM_ECOLI (303 aa), 93% identity in 303 aa overlap" FT /db_xref="GOA:Q8Z4V7" FT /db_xref="HSSP:1O58" FT /db_xref="InterPro:IPR005858" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V7" FT /protein_id="CAD07671.1" FT /translation="MNTLEQTIGNTPLVKLQRLGPDNGSEIWVKLEGNNPAGSVKDRAA FT LSMIVEAEKRGEIKPGDALIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR FT AYGAELILVTKEQGMEGARDLALAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTS FT GRITHFVSSMGTTGTITGVSRFLREQEKTVTIVGLQPEEGSSIPGIRRWPTEYMPGIFN FT ASLVDEVLDIHQNDAENTMRELAVREGIFCGVSSGGAVAGALRVARATPGAIVVAIICD FT RGDRYLSTGVFGEEHFSQGAGI" FT misc_feature complement(210883..211719) FT /note="Pfam match to entry PF00291 PALP, FT Pyridoxal-phosphate dependent enzyme, score 376.10, E-value FT 3.5e-109" FT misc_feature complement(211585..211641) FT /note="PS00901 Cysteine synthase/cystathionine FT beta-synthase P-phosphate attachment site" FT CDS complement(211849..212943) FT /transl_table=11 FT /gene="STY2678" FT /gene_synonym="cysA" FT /product="sulphate transport ATP-binding protein CysA" FT /note="Fasta hit to UGPC_ECOLI (356 aa), 36% identity in FT 356 aa overlap" FT /note="Orthologue of E. coli cysA (CYSA_ECOLI); Fasta hit FT to CYSA_ECOLI (365 aa), 93% identity in 365 aa overlap" FT /db_xref="GOA:Q8Z4V6" FT /db_xref="HSSP:1L2T" FT /db_xref="InterPro:IPR005666" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4V6" FT /protein_id="CAD07672.1" FT /translation="MSIEIARIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLL FT RIIAGLEHQSSGHIRFHGTDVSRLHARERKVGFVFQHYALFRHMTVFDNIAFGLTVLPR FT RDRPTAAAIKTKVTQLLEMVQLAHLADRFPAQLSGGQKQRVALARALAVEPQILLLDEP FT FGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPD FT RVWREPATRFVLEFMGEVNRLTGTVRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVD FT ISRRTSLDSPLPVQVIEASPKGHYTQLVVQPLGWYHDPLTVVMAGDDVPQRGERLFVGL FT QNARLYHGDQRIEPHEALALAESA" FT misc_feature complement(212305..212862) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 246.20, E-value 4.7e-70" FT misc_feature complement(212491..212535) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(212818..212841) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(212933..213808) FT /transl_table=11 FT /gene="STY2679" FT /gene_synonym="cysW" FT /product="sulphate transport system permease protein CysW" FT /note="Fasta hit to CYST_ECOLI (277 aa), 37% identity in FT 259 aa overlap" FT /note="Orthologue of E. coli cysW (CYSW_ECOLI); Fasta hit FT to CYSW_ECOLI (291 aa), 97% identity in 291 aa overlap" FT /db_xref="GOA:Q8Z4V5" FT /db_xref="InterPro:IPR011866" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V5" FT /protein_id="CAD07673.1" FT /translation="MAEVTQLKRYDVPRINWGKWFLIGVGMLVSAFILLVPMIYIFVQA FT FSKGLMPVLQNLADPDMLHAIWLTVLIALIAVPMNLVFGILLAWLVTRFNFPGRQLLLT FT LLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQMMFSWPGMVLVTIFVTCPFVVR FT ELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVS FT VVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEK FT RAQQEENHEH" FT RBS complement(212950..212955) FT /note="possible RBS" FT misc_feature complement(213065..213307) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 44.60, E-value 2.2e-09" FT misc_feature complement(213218..213304) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS complement(213808..214641) FT /transl_table=11 FT /gene="STY2680" FT /gene_synonym="cysU" FT /product="sulphate transport system permease protein CysT" FT /note="Fasta hit to MODB_ECOLI (229 aa), 34% identity in FT 228 aa overlap" FT /note="Fasta hit to CYSW_ECOLI (291 aa), 37% identity in FT 250 aa overlap" FT /note="Orthologue of E. coli cysU (CYST_ECOLI); Fasta hit FT to CYST_ECOLI (277 aa), 95% identity in 277 aa overlap" FT /db_xref="GOA:Q8Z4V4" FT /db_xref="InterPro:IPR011865" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V4" FT /protein_id="CAD07674.1" FT /translation="MLAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSWS FT QYWDVVTNPQVVAAYKVTLLAAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPF FT ALPTAVAGLTLASLFSVNGFYGQFLAQFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVL FT EELGPEYEEAAQTLGATRLQSFRKVVLPELSPALIAGVALSFTRSLGEFGAVIFIAGNI FT AWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH" FT misc_feature complement(213916..214158) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 84.50, E-value 2.2e-21" FT misc_feature complement(214069..214155) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS complement(214641..215657) FT /transl_table=11 FT /gene="STY2681" FT /gene_synonym="cysP" FT /product="thiosulphate-binding protein precursor" FT /note="Similar to Salmonella typhimurium FT thiosulphate-binding protein precursor cysP SW:CYSP_SALTY FT (P41031) (338 aa) fasta scores: E(): 0, 97.3% id in 338 aa" FT /note="Fasta hit to SUBI_ECOLI (329 aa), 47% identity in FT 320 aa overlap" FT /note="Orthologue of E. coli cysP (CYSP_ECOLI); Fasta hit FT to CYSP_ECOLI (338 aa), 94% identity in 337 aa overlap" FT /db_xref="GOA:Q8Z4V3" FT /db_xref="HSSP:1SBP" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V3" FT /protein_id="CAD07675.1" FT /translation="MAVNLLKKRLLTLAAMLLLAGQAQATELLNSSYDVSRELFAALNP FT PFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIP FT ADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWSDLVRSDVKLIFPNPKTSGNARYTYL FT AAWGAADNADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVN FT NIRKQYEAQGFEVVIPKTNILAEFPVAWVDKYVKANGTEKAAKAYLNWLYSPQAQTIIT FT HYYYRVNNPEIMGKQADKFPQTGLFRVEDKFGTWPEVMKTHFASGGELDKLLAAGRK" FT misc_feature complement(214653..215642) FT /note="Pfam match to entry PF01100 Sulphate_bind, FT Prokaryotic sulphate- and thiosulphate-binding protein, FT score 797.10, E-value 6.5e-236" FT misc_feature complement(215181..215207) FT /note="PS00757 Prokaryotic sulfate-binding proteins FT signature 2" FT misc_feature complement(215463..215501) FT /note="PS00401 Prokaryotic sulfate-binding proteins FT signature 1" FT misc_feature complement(215517..215537) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature" FT CDS complement(215815..216606) FT /transl_table=11 FT /gene="STY2682" FT /gene_synonym="yfeF" FT /gene_synonym="ucpA" FT /product="putative oxidoreductase" FT /EC_number="1.-.-.-" FT /note="Similar to many e.g. Rhizobium meliloti FT D-beta-hydroxybutyrate dehydrogenase bdhA SW:BDHA_RHIME FT (O86034) (258 aa) fasta scores: E(): 6.7e-25, 38.0% id in FT 255 aa" FT /note="Fasta hit to FABG_ECOLI (244 aa), 37% identity in FT 248 aa overlap" FT /note="Fasta hit to YCIK_ECOLI (252 aa), 34% identity in FT 227 aa overlap" FT /note="Fasta hit to YJGI_ECOLI (237 aa), 35% identity in FT 254 aa overlap" FT /note="Fasta hit to YOHF_ECOLI (253 aa), 32% identity in FT 254 aa overlap" FT /note="Fasta hit to YGCW_ECOLI (261 aa), 33% identity in FT 249 aa overlap" FT /note="Fasta hit to YGFF_ECOLI (247 aa), 31% identity in FT 257 aa overlap" FT /note="Fasta hit to KDUD_ECOLI (253 aa), 34% identity in FT 252 aa overlap" FT /note="Fasta hit to ENTA_ECOLI (248 aa), 34% identity in FT 259 aa overlap" FT /note="Fasta hit to IDNO_ECOLI (254 aa), 35% identity in FT 250 aa overlap" FT /note="Fasta hit to HDHA_ECOLI (255 aa), 33% identity in FT 251 aa overlap" FT /note="Orthologue of E. coli yfeF (UCPA_ECOLI); Fasta hit FT to UCPA_ECOLI (285 aa), 93% identity in 265 aa overlap" FT /db_xref="GOA:P0A2D2" FT /db_xref="HSSP:1FK8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P0A2D2" FT /protein_id="CAD07676.1" FT /translation="MGKLTGKTALITGASQGIGEGIARVFARHGANLILLDISDEIEKL FT ADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMSEE FT DRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIV FT GLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLA FT DPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPESVSVGV" FT misc_feature complement(215860..215952) FT /note="Pfam match to entry PF00678 adh_short_C2, Short FT chain dehydrogenase/reductase C-terminus, score 39.30, FT E-value 1.9e-09" FT misc_feature complement(216034..216588) FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 258.80, E-value 7.1e-74" FT RBS complement(216616..216621) FT /note="possible RBS" FT CDS complement(216843..217742) FT /transl_table=11 FT /gene="STY2683" FT /product="conserved hypothetical protein" FT /note="Similar to hypothetical proteins e.g. Neisseria FT meningitidis serogroup A hypothetical protein NMA0996 FT TR:Q9JV47 (EMBL:AL162754) (302 aa) fasta scores: E(): 0, FT 50.3% id in 302 aa, Neisseria meningitidis serogroup B FT hypothetical protein NMB0786 TR:Q9K036 (EMBL:AE002432) (302 FT aa) fasta scores: E(): 0, 50.3% id in 302 aa and Vibrio FT cholerae TyrA protein VC2145 TR:Q9KQ59 (EMBL:AE004287) (302 FT aa) fasta scores: E(): 0, 45.6% id in 294 aa" FT /note="Orthologue of E. coli P76536; Fasta hit to P76536 FT (308 aa), 94% identity in 299 aa overlap" FT /db_xref="InterPro:IPR006314" FT /db_xref="UniProtKB/TrEMBL:Q8XGB1" FT /protein_id="CAD07677.1" FT /translation="MSQVQSGILPEHCRAAIWIEANVKGDLDALRAASRTFADKLATFE FT VKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFIPYGKGLAPATQYDVLIHILSLRHD FT VNFSVAQAAMEAFGDCIDVKEEVHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDG FT VDAGGSYVFVQRWEHNLKQLNRMSIHDQEMMIGRTKEANEEIDGDARPATSHLSRVDLK FT EDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTK FT PVTGGYYFAPSLDRLLAL" FT RBS complement(217747..217752) FT /note="possible RBS" FT CDS complement(217837..218412) FT /transl_table=11 FT /gene="STY2684" FT /product="putative lipoprotein" FT /note="Orthologue of E. coli P76537; Fasta hit to P76537 FT (191 aa), 81% identity in 191 aa overlap. Contains probable FT N-terminal signal sequence" FT /db_xref="InterPro:IPR010938" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V2" FT /protein_id="CAD07678.1" FT /translation="MKSLRLTLLALPLALTGCSTLSSVNWSAANPWNWFGSSTEVTEQG FT VGALTAATPLEEPAIAEALDGDYRLRSGMKTDNGNVVRFFEAMKGDSVAMVINGEQGTV FT SRIDVLDSDIPTAAGGKIGTPFSDLYSKAFGHCEPVSSDSHTSVECKAEGSQHISYVFS FT GEWSGPEGLMPPDDVLKNWDVRKIIWRR" FT misc_feature complement(218359..218391) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(218474..218923) FT /transl_table=11 FT /gene="STY2685" FT /product="conserved hypothetical protein" FT /note="Shows weak similarity to Vibrio cholerae FT hypothetical protein VC2146 TR:Q9KQ58 (EMBL:AE004287) (154 FT aa) fasta scores: E(): 3.4e-08, 35.0% id in 123 aa" FT /note="Orthologue of E. coli YFEZ_ECOLI; Fasta hit to FT YFEZ_ECOLI (149 aa), 73% identity in 149 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8Z4V1" FT /protein_id="CAD07679.1" FT /translation="MKSTEFHPADYDVHGCLRLPFLFWCVLLLQARAWVLFVIAGSSRG FT QGNTLLNFFYPDHDNFWLGLLPGVPAVVAFLLSGRREAVPGVWRWLRGLLILAQLVSLC FT WLPVMWLGGDPVNGVGLALLLADIVALIWLLTNQRLRACFSLEKE" FT CDS complement(218910..219335) FT /transl_table=11 FT /gene="STY2686" FT /product="putative acetyltransferase" FT /note="Similar to many putative acetyltransferases e.g. FT Streptomyces coelicolor putative acetyltransferase 2SCG1.25 FT TR:CAC01474 (EMBL:AL391014) (141 aa) fasta scores: E(): FT 1e-08, 33.6% id in 122 aa and Campylobacter jejuni FT streptothricin acetyltransferase homolog sat TR:Q9RGZ9 FT (EMBL:AF093219) (148 aa) fasta scores: E(): 1.7e-07, 29.1% FT id in 127 aa" FT /db_xref="GOA:P63424" FT /db_xref="InterPro:IPR000182" FT /db_xref="UniProtKB/Swiss-Prot:P63424" FT /protein_id="CAD07680.1" FT /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKVNHDVSLF FT LVAEVSGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQ FT IMVRDDNDVVLGMYERLGYEHSDALSLGKRLIEDEEY" FT misc_feature complement(218964..219188) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 74.60, E-value FT 2.1e-18" FT CDS 219548..220417 FT /transl_table=11 FT /gene="STY2687" FT /gene_synonym="amiA" FT /product="probable N-acetylmuramoyl-L-alanine amidase" FT /EC_number="3.5.1.28" FT /note="Similar to Salmonella typhimurium probable FT N-acetylmuramoyl-L-alanine amidase amiA precursor FT SW:AMIA_SALTY (P33772) (289 aa) fasta scores: E(): 0, 99.7% FT id in 289 aa" FT /note="Orthologue of E. coli amiA (AMIA_ECOLI); Fasta hit FT to AMIA_ECOLI (289 aa), 93% identity in 289 aa overlap" FT /db_xref="GOA:Q8Z4U9" FT /db_xref="InterPro:IPR002508" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U9" FT /protein_id="CAD07681.1" FT /translation="MSTFKLLKTLTSRRQVLKTGLAALTLSGMSHAIAKEETLKTSNGH FT SKPKTKKTGSKRLVMLDPGHGGIDTGAIGRNGSQEKHVVLAIAKNVRAILRNHGIDARL FT TRTGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYL FT SERENRADEVAGKKATDRDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPIHKLHSRT FT TEQAAFVVLKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGIISYFHWFDN FT QKAHTKKR" FT misc_feature 219899..220378 FT /note="Pfam match to entry PF01520 Amidase_3, FT N-acetylmuramoyl-L-alanine amidase, score 282.00, E-value FT 7.5e-81" FT misc_feature 220420..221316 FT /note="Pfam match to entry PF01218 Coprogen_oxidas, FT Coproporphyrinogen III oxidase, score 792.70, E-value FT 4.1e-290" FT CDS 220420..221319 FT /transl_table=11 FT /gene="STY2688" FT /gene_synonym="hemF" FT /product="coproporphyrinogen III oxidase" FT /EC_number="1.3.3.3" FT /note="Similar to Salmonella typhimurium coproporphyrinogen FT III oxidase, aerobic hemF SW:HEM6_SALTY (P33771) (299 aa) FT fasta scores: E(): 0, 98.7% id in 299 aa" FT /note="Orthologue of E. coli hemF (HEM6_ECOLI); Fasta hit FT to HEM6_ECOLI (299 aa), 91% identity in 299 aa overlap" FT /db_xref="GOA:Q8Z4U8" FT /db_xref="InterPro:IPR018375" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4U8" FT /protein_id="CAD07682.1" FT /translation="MKPDAHHVKQFLLRLQDDICQTLSAVDGANFIEDSWRREAGGGGR FT SRVLRNGGIFEQAGVNFSHVHGDAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYIPT FT SHANVRFFIAEKPGADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRY FT KKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKA FT MVWGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDWQPE FT AGSPEAALSEFIQVRDWI" FT misc_feature 220909..220983 FT /note="PS01021 Coproporphyrinogen III oxidase signature" FT CDS 221340..221669 FT /transl_table=11 FT /gene="STY2689" FT /product="putative membrane protein" FT /note="Unknown function. Contains hydrophobic, possible FT membrane-spanning regions" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U7" FT /protein_id="CAD07683.1" FT /translation="MQTNTRKVVTSDAKWHPHLGISFIGCLLAITLEIYFEERIFIPHS FT GGVSFGLIVLLVINMVTIPVVMALIALLCFIIHIPRKSVNCILLCLLACILTIAGLFIA FT YPVGR" FT RBS 221785..221788 FT /note="possible RBS" FT CDS 221798..223075 FT /transl_table=11 FT /gene="STY2690" FT /product="hypothetical protein" FT /note="Similar to Salmonella typhimurium hypothetical FT protein SW:YFE1_SALTY (Q9ZFU6) (263 aa) fasta scores: E(): FT 0, 91.3% id in 264 aa. Contains a C-terminal extension with FT respect to the Salmonella typhimurium homologue" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U6" FT /protein_id="CAD07684.1" FT /translation="MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQEQEEYIR FT KNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWIPCPIPTDELYKKLSDDESRDMVDY FT AEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDVRDA FT LLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWE FT LTENGRRRDLYFTQCTHLVKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGL FT STQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKNALSTLAVENSSDWITLPLDV FT LHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEE FT EEYAEGMLYGFICPSCQTTATSYQQT" FT CDS complement(223275..224327) FT /transl_table=11 FT /gene="STY2691" FT /gene_synonym="yfeG" FT /gene_synonym="eutR" FT /product="ethanolamine operon transcriptional regulator" FT /note="Similar to Salmonella typhimurium LT2 ethanolamine FT operon regulatory protein. ethanolamine operon regulatory FT protein SW:EUTR_SALTY (Q9ZFU7) (350 aa) fasta scores: E(): FT 0, 99.1% id in 350 aa" FT /note="Orthologue of E. coli yfeG (EUTR_ECOLI); Fasta hit FT to EUTR_ECOLI (350 aa), 91% identity in 349 aa overlap" FT /db_xref="GOA:Q8Z4U5" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U5" FT /protein_id="CAD07685.1" FT /translation="MKKTRTANLHHLYHEALPEDVKLTPRVEVDNVHQRRTTDVYEHAL FT TITAWQQIYDQLHLGKFHGEFTEILLDEIQVFREYTGLALRQSCLVWPNSFWFGIPATR FT GEQGFIGAQGLGSAEIATRPGGTEFELSTPDDYTILGVVISEDVISRQATFLHNPERVL FT HMLRNQLALEVKEQHKAALWGFVQQALATFSESPETLHQPAVRKVLSDNLLLAMGTMLE FT EAKPIHSAESISHQGYRRLLSRAREYVLENMSEPLTVLDLCNQLHVSRRTLQNAFHAIL FT GIGPNAWLKRIRLNAVRRELISPWSQSTTVRDAAMQWGFWHLGQFATDYQQLFAEKPSL FT TLHQRMRQWA" FT misc_feature complement(223293..223562) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 100.50, E-value 3.3e-26" FT misc_feature complement(223314..223451) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature" FT CDS complement(224375..224869) FT /transl_table=11 FT /gene="eutK" FT /gene_synonym="STY2692" FT /product="ethanolamine utilization protein EutK" FT /note="Similar to Escherichia coli ethanolamine utilization FT protein EutK precursor eutK SW:EUTK_ECOLI (P76540) (166 aa) FT fasta scores: E(): 0, 79.9% id in 164 aa and Salmonella FT typhimurium ethanolamine utilization protein EutK precursor FT eutK SW:EUTK_SALTY (Q9ZFU8) (164 aa) fasta scores: E(): 0, FT 97.6% id in 164 aa. The N-terminal approx 100 aa is similar FT to Salmonella typhimurium propanediol utilization protein FT PduA which has been implicated in polyhedral body formation FT which may protect the cell from toxic metabolites" FT /db_xref="InterPro:IPR000249" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U4" FT /protein_id="CAD07686.1" FT /translation="MINALGLLEVDGMVAAVDAADAMLKAANVRLLSHQVLDPGRLTLV FT VEGDLAACRAALDAGSAAAQHTGRVISRKEIGRPEEDTQWLIGGFARATTPTEKAPQVP FT ATPEFAEALLALLASVRQGMTAGEVAAHFGWPLEQARNVLEQLFSDGALRKRSSRYRIK FT N" FT misc_feature complement(224606..224863) FT /note="Pfam match to entry PF00936 Bact_microcomp, FT Bacterial microcompartments protein family, score 153.90, FT E-value 2.9e-42" FT misc_feature complement(224750..224809) FT /note="PS01139 Bacterial microcompartiments proteins FT signature" FT RBS complement(224876..224880) FT /note="possible RBS" FT CDS complement(224882..225541) FT /transl_table=11 FT /gene="eutL" FT /gene_synonym="STY2693" FT /product="ethanolamine utilization protein EutL" FT /note="Identical to Salmonella typhimurium ethanolamine FT utilization protein EutL eutL SW:EUTL_SALTY (Q9ZFU9) (219 FT aa) fasta scores: E(): 0, 100.0% id in 219 aa. Shows weak FT similarity to Salmonella typhimurium propanediol FT utilization protein PduB pduB SW:PDUB_SALTY (P37449) (233 FT aa) blastp scores: Expect = 2.0e-12, implicated in FT polyhedral body formation which may protect the cell from FT toxic metabolites" FT /note="Orthologue of E. coli EUTL_ECOLI; Fasta hit to FT EUTL_ECOLI (219 aa), 94% identity in 219 aa overlap" FT /db_xref="GOA:P0A1D0" FT /db_xref="InterPro:IPR009193" FT /db_xref="UniProtKB/Swiss-Prot:P0A1D0" FT /protein_id="CAD07687.1" FT /translation="MPALDLIRPSVTAMRVIASVNDGFARELKLPPHIRSLGLITADSD FT DVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMV FT ASIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGIALGDPMAYLVAPPLEATFGID FT AAMKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLDIARNPVQRA" FT RBS complement(225547..225553) FT /note="possible RBS" FT CDS complement(225551..226447) FT /transl_table=11 FT /gene="eutC" FT /gene_synonym="STY2694" FT /product="ethanolamine ammonia-lyase light chain" FT /EC_number="4.3.1.7" FT /note="Similar to Salmonella typhimurium ethanolamine FT ammonia-lyase light chain eutC SW:EUTC_SALTY (P19265) (298 FT aa) fasta scores: E(): 0, 99.3% id in 298 aa" FT /note="Orthologue of E. coli eutC (EUTC_ECOLI); Fasta hit FT to EUTC_ECOLI (295 aa), 91% identity in 298 aa overlap" FT /db_xref="GOA:Q8Z4U3" FT /db_xref="InterPro:IPR009246" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4U3" FT /protein_id="CAD07688.1" FT /translation="MDQKQIEEIVRSVMASMGQDVPQPVAPSTQEGAKPQCAAPTVTES FT CALDLGSAEAKAWIGVENPHRADVLTELRRSTAARVCTGRAGPRPRTQALLRFLADHSR FT SKDTVLKEVPEEWGKAQGLLEVRSEISDKNLYLTRPDMGRRLSPEAIDALKSQCVMNPD FT VQVVVSDGLSTDAITANYEEILPPLLAGLKQAGLNVGTPFFVRYGRVKIEDQIGEILGA FT KVVILLVGERPGLGQSESLSCYAVYSPRVATTVEADRTCISNIHQGGTPPVEAAAVIVD FT LAKRMLEQKASGINMTR" FT CDS complement(226466..227827) FT /transl_table=11 FT /gene="eutB" FT /gene_synonym="STY2695" FT /product="ethanolamine ammonia-lyase heavy chain" FT /EC_number="4.3.1.7" FT /note="Similar to Salmonella typhimurium ethanolamine FT ammonia-lyase heavy chain SW:EUTB_SALTY (P19264) (453 aa) FT fasta scores: E(): 0, 99.8% id in 453 aa" FT /note="Orthologue of E. coli eutB (EUTB_ECOLI); Fasta hit FT to EUTB_ECOLI (453 aa), 98% identity in 453 aa overlap" FT /db_xref="GOA:Q8Z4U2" FT /db_xref="InterPro:IPR010628" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U2" FT /protein_id="CAD07689.1" FT /translation="MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQERV FT AAKQVLSEMTVADIRNNPVIAYEEDCVTRLIQDDVNETAYNRIKNWSISELREYVLSDE FT TSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGGKKMPVIKKANTTIGIPGTFSCRLQP FT NDTRDDVQSIAAQIYEGLSFGAGDAVIGVNPVTDDVENLTRVLDTVYGVIDKFNIPTQG FT CVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGE FT NCLYFETGQGSALSAGANFGADQVTMEARNYGLARYYDPFLVNTVVGFIGPEYLYNDRQ FT IIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMGMPLGDD FT IMLNYQTTAFHDTATVRQLLNLRPSPEFERWLETMGIMANGRLTKRAGDPSLFF" FT RBS complement(227837..227840) FT /note="possible RBS" FT CDS complement(227839..229242) FT /transl_table=11 FT /gene="eutA" FT /gene_synonym="STY2696" FT /product="putative ethanolamine utilization protein EutA" FT /note="Similar to Salmonella typhimurium ethanolamine FT utilization protein EutA eutA SW:EUTA_SALTY (Q9ZFV2) (467 FT aa) fasta scores: E(): 0, 99.1% id in 467 aa" FT /note="Orthologue of E. coli EUTA_ECOLI; Fasta hit to FT EUTA_ECOLI (467 aa), 90% identity in 467 aa overlap. Shares FT a region of similarity with EutJ and DnaK/FtsA" FT /db_xref="InterPro:IPR009377" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U1" FT /protein_id="CAD07690.1" FT /translation="MNTRQLLSVGIDIGTTTTQVIFSRLELVNRAAVSQVPRYEFIKRD FT ISWQSPVFFTPVDKQGGLKEAELKALILAQYQAAGIAPESVDSGAIIITGESAKTRNAR FT PAVMALSQSLGDFVVASAGPHLESVIAGYGAGAQSLSEQRMCRVLNIDIGGGTSNYALF FT DAGKVSGTACLNVGGRLLETDAQGRVVYAHQPGQMIIDEVFGSGTDARALAAAQLGQVA FT RRMADLIVEVITGALSPLAQSLMQTGLLPADITPEVITLSGGVGECYRNQPADPFCFSD FT IGPLLATALHEHPRLREMNVQFPAQTVRATVIGAGAHTLSLSGSTIWLEDVQLPLRNLP FT VAIPQDDADLVNAWRQALLQLDLDPQTDAYVLALPSTLPVRYAALLTVINALTAFVARY FT PNPHPLLVVAEQDFGKALGMLLRPQLPQLPLAVIDEVVVRAGDYIDIGTPLFGGSVVPV FT TVKSLAFPS" FT CDS complement(229239..230465) FT /transl_table=11 FT /gene="STY2697" FT /gene_synonym="eutH" FT /product="putative membrane protein" FT /note="Similar to Salmonella typhimurium ethanolamine FT utilization protein EutH eutH SW:EUTH_SALTY (P41796) (415 FT aa) fasta scores: E(): 0, 96.6% id in 416 aa. Contains FT hydrophobic, probable membrane-spanning regions" FT /note="Orthologue of E. coli eutH (EUTH_ECOLI); Fasta hit FT to EUTH_ECOLI (408 aa), 97% identity in 408 aa overlap" FT /db_xref="GOA:Q8Z4U0" FT /db_xref="InterPro:IPR007441" FT /db_xref="UniProtKB/TrEMBL:Q8Z4U0" FT /protein_id="CAD07691.1" FT /translation="MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEESG FT GQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACDMG FT GFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLAGIV FT TIPIGCIAGGLIAMYSGVQINGQPVEFTFALILMNMIPVLIVAVLVALGLKFIPEKMIN FT GFQIFAKFLVALITIGLAAAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEVIGSIS FT CVLLGAYPMVLLLTRWFEKPLMNVGKLLNVNNIAAAGMVATLANNIPMFGMMKQMDTRG FT KVINCAFAVSAAFALVDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLVPKDDAAQ FT VKTEAEAQS" FT RBS complement(229250..229254) FT /note="possible RBS" FT RBS complement(230474..230477) FT /note="possible RBS" FT CDS complement(230584..231771) FT /transl_table=11 FT /gene="eutG" FT /gene_synonym="STY2698" FT /product="putative alchohol dehydrogenase" FT /note="Similar to Escherichia coli ethanolamine utilization FT protein EutG eutG SW:EUTG_ECOLI (P76553) (395 aa) fasta FT scores: E(): 0, 86.0% id in 394 aa and Salmonella FT typhimurium ethanolamine utilization protein EutG eutG FT SW:EUTG_SALTY (P41795) (391 aa) fasta scores: E(): 0, 93.4% FT id in 395 aa" FT /db_xref="GOA:Q8Z4T9" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T9" FT /protein_id="CAD07692.1" FT /translation="MQAELQTALFQAFNTLNLQRVKTFSVPPVTLCGLGALGACGQEAQ FT ARGVSHLFVMVDSFLHQAGMTAPLARSLAMKGVAMTVWPCPPGEPCITDVCAAVAQLRE FT AACDGVVAFGGGSVLDAAKAVALLVTNPDQTLSAMTERSTLRPRLPLIAVPTTAGTGSE FT TTNVTVIIDAVSGRKQVLAHASLMPDVAILDAAVTEGVPPNVTAMTGIDALTHAIEAYS FT ALNATPFTDSLAIGAIAMIGKSLPKAVGYGQDLAARENMLLASCMAGMAFSSAGLGLCH FT AMAHQPGAALHIPHGQANAMLLPTVMGFNRMVCRERFSQIGRALTNKKSDDRDAIAAVC FT ELIAEVGQSKRLADAGAKPEHYSAWAQAALEDICLRSNPRTATQAQIIDLYAAAG" FT misc_feature complement(230611..231693) FT /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing FT alcohol dehydrogenases, score 654.10, E-value 7.3e-193" FT misc_feature complement(230878..230940) FT /note="PS00060 Iron-containing alcohol dehydrogenases FT signature 2" FT misc_feature complement(231040..231063) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(231115..231201) FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1" FT CDS complement(231761..232600) FT /transl_table=11 FT /gene="STY2699" FT /gene_synonym="eutJ" FT /product="putative ethanolamine utilization protein EutJ" FT /note="Identical to Salmonella typhimurium eutJ FT SW:EUTJ_SALTY (P41794) (279 aa) fasta scores: E(): 0, FT 100.0% id in 279 aa" FT /note="Orthologue of E. coli eutJ (EUTJ_ECOLI); Fasta hit FT to EUTJ_ECOLI (278 aa), 89% identity in 278 aa overlap. FT Shares a region of similarity with EutA and DnaK/FtsA" FT /db_xref="InterPro:IPR013366" FT /db_xref="UniProtKB/Swiss-Prot:P0A207" FT /protein_id="CAD07693.1" FT /translation="MAHDEQLWLTPRLQKAAALCNQTPAASDTPLWLGVDLGTCDVVSM FT VVDGNAQPVAVCLDWADVVRDGIVWDFFGAVTLVRRHLDTLEQQLGCRFTHAATSFPPG FT TDPRISINVLESAGLEVSHVLDEPTAVADLLALDNAGVVDIGGGTTGIAIVKQGKVTYS FT ADEATGGHHISLTLAGNRRIPLEEAEQYKRSNAQEIWPVVKPVYEKMAEIVARHIEGQG FT IADLWLAGGSCMQPGVEALFRQRFPELQVHLPQHSLFMTPLAIANSGRAKAEGLYAS" FT RBS complement(231778..231782) FT /note="possible RBS" FT CDS complement(232611..234014) FT /transl_table=11 FT /gene="STY2700" FT /gene_synonym="eutE" FT /product="putative aldehyde dehydrogenase" FT /note="Similar to Salmonella typhimurium ethanolamine FT utilization protein EutE eutE SW:EUTE_SALTY (P41793) (467 FT aa) fasta scores: E(): 0, 99.4% id in 467 aa" FT /note="Orthologue of E. coli eutE (EUTE_ECOLI); Fasta hit FT to EUTE_ECOLI (467 aa), 94% identity in 467 aa overlap" FT /db_xref="GOA:Q8Z4T8" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T8" FT /protein_id="CAD07694.1" FT /translation="MNQQDIEQVVKAVLLKMKDSSQPASTVHEMGVFASLDDEVAAAKR FT AQQGLKSVAMRQLAIHAIREAGEKHARELAELAVSETGMGRVDDKFAKNVAQARGTPGV FT ECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVVFAPHPA FT AKKVSQRAITLLNQAVVAAGGPENLLVTVANPDIETAQRLFKYPGIGLLVVTGGEAVVD FT AARKHTNKRLIAAGAGNPPVVVDETADLPRAAQSIVKGASFDNNIICADEKVLIVVDSV FT ADELMRLMEGQHAVKLTAAQAEQLQPVLLKNIDERGKGTVSRDWVGRDAGKIAAAIGLN FT VPDQTRLLFVETPANHPFAVTEMMMPVLPVVRVANVEDAIALAVQLEGGCHHTAAMHSR FT NIDNMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRC FT VLVDAFRIV" FT misc_feature complement(232629..233993) FT /note="Pfam match to entry PF00171 aldedh, Aldehyde FT dehydrogenase family, score -144.30, E-value 4.5e-08" FT CDS complement(234026..234715) FT /transl_table=11 FT /gene="eutN" FT /gene_synonym="cchB" FT /gene_synonym="STY2701" FT /product="putative ethanolamine utilization protein EutN" FT /note="Identical, at the C-terminus, to Salmonella FT typhimurium ethanolamine utilization protein EutN eutN or FT cchB SW:EUTN_SALTY (P41792) (99 aa) fasta scores: E(): 0, FT 100.0% id in 99 aa. Similar, at the C-terminus, to FT Escherichia coli ethanolamine utilization protein EutN eutN FT SW:EUTN_ECOLI (P77633) (95 aa) fasta scores: E(): 1.4e-31, FT 91.6% id in 95 aa" FT /db_xref="InterPro:IPR004992" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T7" FT /protein_id="CAD07695.1" FT /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMV FT RGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPISFKGAATFDGRPDKTR FT SVAIRHECAPLPDSAQIQGLRPNGQSMEADMKLAVVTGQIVCTVRHQGLAHDKLLMVEM FT IDAQGNPDGQCAVAIDSIGAGTGEWVLLVSGSSARQAHRSELSPVDLCVIGIVDEVVAG FT GKVVFHK" FT misc_feature complement(234455..234715) FT /note="Pfam match to entry PF00936 Bact_microcomp, FT Bacterial microcompartments protein family, score 206.80, FT E-value 3.4e-58" FT misc_feature complement(234599..234658) FT /note="PS01139 Bacterial microcompartiments proteins FT signature" FT RBS complement(234724..234727) FT /note="possible RBS" FT CDS complement(234756..235772) FT /transl_table=11 FT /gene="eutD" FT /gene_synonym="eutI" FT /gene_synonym="STY2702" FT /product="putative phosphate acyltransferase" FT /note="Similar to Salmonella typhimurium ethanolamine FT utilization protein EutD eutD or eutI SW:EUTD_SALTY FT (P41790) (338 aa) fasta scores: E(): 0, 98.8% id in 338 aa. FT Similar to phosphate acetyltransferases e.g. Clostridium FT acetobutylicum phosphate acetyltransferase pta SW:PTA_CLOAB FT (P71103) (333 aa) fasta scores: E(): 0, 38.1% id in 331 aa" FT /note="Orthologue of E. coli eutI (EUTD_ECOLI); Fasta hit FT to EUTD_ECOLI (338 aa), 89% identity in 338 aa overlap" FT /db_xref="GOA:Q8Z4T6" FT /db_xref="InterPro:IPR012147" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T6" FT /protein_id="CAD07696.1" FT /translation="MIIERARELAVRAPARVVFPDALDERVLKAAHYLQQCGLARPVLV FT ASPFALRQFALSHRMAMDGIQVIDPHSNLSMRQRFAQRWLARAGEKTPPDAVEKLSDPL FT MFAAAMVSAGEADVCIAGNLSSTANVLRAGLRVIGLQPGCKTLSSIFLMLPQYAGPALG FT FADCSVVPQPTAAQLADIAIASADTWRAITGEEPRVAMLSFSSNGSARHPNVANVQQAT FT EFVRERAPQLLVDGELQFDAAFVPEVAAQKAPDSPLQGRANVMIFPSLEAGNIGYKIAQ FT RLGGYRAVGPLIQGLAAPLHDLSRGCSVQEIIELALVAAVPRQADVSRERSLHTLVE" FT misc_feature complement(234813..235772) FT /note="Pfam match to entry PF01515 PTA_PTB, Phosphate FT acetyl/butaryl transferase, score 571.70, E-value 4.8e-168" FT CDS complement(235769..236566) FT /transl_table=11 FT /gene="STY2703" FT /product="putative cobalamin adenosyltransferase" FT /EC_number="2.5.1.17" FT /note="Similar to Salmonella typhimurium ethanolamine FT utilization cobalamin adenosyltransferase SW:EUTT_SALTY FT (Q9ZFV4) (267 aa) fasta scores: E(): 0, 98.9% id in 267 aa" FT /note="Orthologue of E. coli EUTT_ECOLI; Fasta hit to FT EUTT_ECOLI (267 aa), 88% identity in 265 aa overlap" FT /db_xref="GOA:Q8Z4T5" FT /db_xref="InterPro:IPR009194" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T5" FT /protein_id="CAD07697.1" FT /translation="MNDFITETWLRANHTLSEGSEIHLPADARLTPSARELLESRRLRI FT KFLDQQGRLFVDDDEQQPVHGLTSSDTHPQACCELCRQPVVKKPDTLTHLTADKMVAKS FT DPRLGFRAALDSAIALTVWLQIELAEPWQPWLFDIRSRLGNIMRADAIDEPLAAQSIVG FT LNEDELHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETLAAQVFITRSFE FT VLRPDILQALNRLSSTVYVMMILSVAKHPLTVAQIQQRLGEKP" FT RBS complement(235780..235783) FT /note="possible RBS" FT CDS complement(236563..237252) FT /transl_table=11 FT /gene="STY2704" FT /product="putative ethanolamine utilization protein EutQ" FT /note="Similar to Salmonella typhimurium LT2 ethanolamine FT utilization protein EutQ eutQ SW:EUTQ_SALTY (Q9ZFV5) (229 FT aa) fasta scores: E(): 0, 99.1% id in 229 aa" FT /note="Orthologue of E. coli EUTQ_ECOLI; Fasta hit to FT EUTQ_ECOLI (233 aa), 87% identity in 233 aa overlap" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T4" FT /protein_id="CAD07698.1" FT /translation="MKKLITANDIRAAHARGEQAMSVVLRASIITPEAREVAELLGFTI FT TECDESVPASTSAQACKSESQRIREAIIAQRPEGQFTESLVAQLMEKVLKEKQSLELGT FT MQPSFTSVTGKGGVKVIDGSSVKFGRFDGAEPHCVGLTDLVTEQDGSSMAAGFMQWDNA FT FFPWTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYVAW FT PANWQSV" FT CDS complement(237230..237709) FT /transl_table=11 FT /gene="STY2705" FT /product="putative ethanolamine utilization protein EutP" FT /note="Similar to Salmonella typhimurium LT2 ethanolamine FT utilization protein EutP eutP SW:EUTP_SALTY (Q9ZFV6) (159 FT aa) fasta scores: E(): 0, 100.0% id in 159 aa and to FT Salmonella typhimurium propanediol utilization protein PduV FT pduV SW:PDUV_SALTY (Q9XDM6) (150 aa) fasta scores: E(): FT 4.1e-07, 30.1% id in 143 aa" FT /note="Orthologue of E. coli EUTP_ECOLI; Fasta hit to FT EUTP_ECOLI (159 aa), 85% identity in 159 aa overlap" FT /db_xref="GOA:P0A209" FT /db_xref="InterPro:IPR012381" FT /db_xref="UniProtKB/Swiss-Prot:P0A209" FT /protein_id="CAD07699.1" FT /translation="MKRIAFVGAVGAGKTTLFNALRGNYSLARKTQAVEFNDHGDIDTP FT GEYFSHPRWYHALITTLQDVDTLIYVHAANDKESRLPAGLLDVGTRKRHIAVISKTDMP FT DADVAATRQLLCEIGFREPIFELNGHDPQSVRQLVDYLAALSEQEEEAGEKTYHS" FT RBS complement(237262..237267) FT /note="possible RBS" FT misc_feature complement(237665..237688) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(237722..238057) FT /transl_table=11 FT /gene="eutS" FT /gene_synonym="STY2706" FT /product="putative ethanolamine utilization protein EutS" FT /note="Similar to Escherichia coli ethanolamine utilization FT protein EutS eutS SW:EUTS_ECOLI (P76557) (111 aa) fasta FT scores: E(): 0, 93.7% id in 111 aa and Salmonella FT typhimurium ethanolamine utilization protein EutS eutS FT SW:EUTS_SALTY (Q9ZFV7) (111 aa) fasta scores: E(): 0, 99.1% FT id in 111 aa. Also similar to Salmonella typhimurium FT propanediol utilization protein PduU pduU SW:PDUU_SALTY FT (Q9XDM7) (116 aa) fasta scores: E(): 4e-21, 56.9% id in 109 FT aa. The Salmonella typhimurium homologue has been FT implicated in polyhedral body formation which may protect FT the cell from toxic metabolites" FT /db_xref="GOA:Q8Z4T3" FT /db_xref="InterPro:IPR009307" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4T3" FT /protein_id="CAD07700.1" FT /translation="MNKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIDIMT FT LTPGETAMIAGDLAMKAADVHIGFLDRFSGALVIYGTVGAVEEALLQTVSGLGRLLNFT FT LCELTKS" FT RBS complement(238068..238071) FT /note="possible RBS" FT repeat_region complement(238427..239145) FT /note="IS200" FT CDS complement(238538..238996) FT /transl_table=11 FT /gene="tnpA" FT /gene_synonym="STY2707" FT /product="transposase for insertion sequence element IS200" FT /note="Similar to Salmonella typhimurium and Salmonella FT typhi transposase for insertion sequence element IS200 tnpA FT SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 98.7% FT id in 152 aa" FT /db_xref="GOA:Q8Z4T2" FT /db_xref="InterPro:IPR002686" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T2" FT /protein_id="CAD07701.1" FT /translation="MRDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLC FT EWKNVRILEAECCADHIYMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNRE FT FWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK" FT misc_feature complement(238631..238942) FT /note="Pfam match to entry PF01797 Transposase_17, FT Transposase IS200 like, score 235.20, E-value 9.1e-67" FT CDS complement(239186..241465) FT /transl_table=11 FT /gene="maeB" FT /gene_synonym="STY2709" FT /product="NADP-dependent malate dehydrogenase FT (decarboxylating)" FT /EC_number="1.1.1.40" FT /note="Similar to Escherichia coli NADP-dependent malic FT enzyme maeB SW:MAO2_ECOLI (P76558) (759 aa) fasta scores: FT E(): 0, 94.3% id in 759 aa" FT /note="Orthologue of E. coli MAO2_ECOLI; Fasta hit to FT MAO2_ECOLI (759 aa), 94% identity in 759 aa overlap" FT /db_xref="GOA:Q8Z4T1" FT /db_xref="InterPro:IPR015884" FT /db_xref="UniProtKB/TrEMBL:Q8Z4T1" FT /protein_id="CAD07702.1" FT /translation="MDEQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAA FT PCLEIEKDPLAAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGI FT DVFDIEVDELDPDKFINVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQ FT HGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGMQKHNIVVCDSK FT GVIYKGREPNMAETKAAYAVDDSGKRTLDEVIDGADIFLGCSGPKVLTQEMVKKMARAP FT MILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAIN FT EEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKA FT AMDSGVATRPIADFDAYIDKLTEFVYKTNLFMKPIFSQARKDPKRVVLPEGEEARVLHA FT TQELITLGLAKPILIGRPSVIEMRIQKLGLQIKAGVDFEIVNNESDPRFKEYWSEYYQI FT MKRRGVTQEQAQRAMIGNHTAIGAIMVQRGEADAMICGTIGDYHEHFSVVKAVFGYRDG FT VHTAGAMNALLLPSGNTFIADTYVNEDPTPEQLAEIAVMAAETVRRFGIEPKVALLSHS FT NFGSSNSLSASKMRETLERVRERAPDLMIDGEMHGDAALVESIRNDRMPDSPLKGAANI FT LVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVSKPVHVLTPIASVRRIVNMVALAVVE FT AQTTPL" FT misc_feature complement(239213..240181) FT /note="Pfam match to entry PF01515 PTA_PTB, Phosphate FT acetyl/butaryl transferase, score 399.90, E-value 2.4e-116" FT RBS complement(241474..241478) FT /note="possible RBS" FT RBS 241723..241728 FT /note="possible RBS" FT CDS 241737..242687 FT /transl_table=11 FT /gene="STY2710" FT /gene_synonym="talA" FT /product="transaldolase A" FT /EC_number="2.2.1.2" FT /note="Fasta hit to TALB_ECOLI (316 aa), 63% identity in FT 311 aa overlap" FT /note="Orthologue of E. coli TALA_ECOLI; Fasta hit to FT TALA_ECOLI (316 aa), 90% identity in 316 aa overlap" FT /db_xref="GOA:Q8Z4T0" FT /db_xref="HSSP:1ONR" FT /db_xref="InterPro:IPR018225" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4T0" FT /protein_id="CAD07703.1" FT /translation="MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGLE FT QYGHLIEDAIAWGKKHGGTQEQQVAAASDKLAVNFGAEILKSIPGRVSTEVDARLSFDK FT EKSIEKARHLVDLYQQQDVDKSRILIKLAATWEGIRAAEQLEKEGINCNLTLLFSFAQA FT RACAEAGVYLISPFVGRIYDWYQARSPLEPYVVEEDPGVKSVRNIYDYFKQHRYETIVM FT GASFRRTEQILALTGCDRLTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMTEAEFR FT WEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL" FT misc_feature 241758..242474 FT /note="Pfam match to entry PF00923 Transaldolase, FT Transaldolase, score 461.50, E-value 6.9e-135" FT misc_feature 241824..241850 FT /note="PS01054 Transaldolase signature 1" FT misc_feature 242118..242171 FT /note="PS00958 Transaldolase active site" FT RBS 242697..242700 FT /note="possible RBS" FT CDS 242707..244707 FT /transl_table=11 FT /gene="STY2711" FT /gene_synonym="tktB" FT /product="transketolase 2" FT /EC_number="2.2.1.1" FT /note="Fasta hit to TKT1_ECOLI (663 aa), 75% identity in FT 661 aa overlap" FT /note="Orthologue of E. coli tktB (TKT2_ECOLI); Fasta hit FT to TKT2_ECOLI (667 aa), 92% identity in 666 aa overlap" FT /db_xref="GOA:Q8Z4S9" FT /db_xref="HSSP:1QGD" FT /db_xref="InterPro:IPR015941" FT /db_xref="UniProtKB/TrEMBL:Q8Z4S9" FT /protein_id="CAD07704.1" FT /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLK FT HNPTDPTWYDRDRFILSNSHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGY FT TPGVETTTGPLGQGLANAVGLAIAERTLGAQFNRPDHEIVDHYTYVFMGDGCLMEGISH FT EVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVVHDIDGHAPEA FT VKKAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEESHGAALGEEEVALTRQKLGWHHP FT AFEIPKEIYRAWDGREKGEKAQQQWQEKFAAYEKAYPELAAEFTRRMSGGLPEAWESAT FT QKFINDLQANPAKIATRKASQNTLNAYGPLLPELLGGSADLAPSNLTIWKGLTSLKEDP FT AGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVY FT THDSIGLGEDGPTHQAMEQLASLRLTPNFSTWRPCDQVEAAVGWKLAIERQHGPTALIL FT SRQNLAQVERTPEQVKAIARGGYILKDSGGKPDIILIATGSEMEITLQAAEKLTGEGHN FT VRVVSLPSTDIFDAQDEAYRESVLPAHVTARVAVEAGIADYWYKYVGLKGAIIGMTGYG FT ESAPADKLFPYFGFTVENIVEKARRVLNIKG" FT misc_feature 242725..244668 FT /note="Pfam match to entry PF00456 transketolase, FT Transketolase, score 1585.20, E-value 0" FT misc_feature 242737..242799 FT /note="PS00801 Transketolase signature 1" FT misc_feature 244102..244152 FT /note="PS00802 Transketolase signature 2" FT CDS complement(244770..245000) FT /transl_table=11 FT /gene="STY2712" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8XFH0" FT /protein_id="CAD07705.1" FT /translation="MKINNGPVLCPHCGCLSAYYEIDRLAAIREKVNKEGGSAAWDSTL FT QAHKKKAFCLMCHKSIDEVVIGQSDAPESTK" FT CDS complement(245128..246171) FT /transl_table=11 FT /gene="STY2713" FT /product="putative exported protein" FT /note="Orthologue of E. coli YPFG_ECOLI; Fasta hit to FT YPFG_ECOLI (347 aa), 78% identity in 347 aa overlap. FT Contains probable N-terminal signal sequence" FT /db_xref="InterPro:IPR009560" FT /db_xref="UniProtKB/TrEMBL:Q8Z4S8" FT /protein_id="CAD07706.1" FT /translation="MRYRVILFCLFGLLPVQLLWAAPAQRTFSDWQVTCNNQNFCVARN FT TGEHHGLVMTLSRSAGARTDAVLRIDRGGLAPPDAKEAAIAPRLLLDGKPLSFDSSHWR FT VSPWHLMTGDPATITAFLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVGSET FT AWIEKGNEPPLSVPPAPALKGIAVINPTPVPLSEEERDDLLDYAAWRVNGIRCSLDPLR FT RETQVSALTDDKALLIVNCEAGAYNTIDLAWVVSRKKTLVSRAVRLRLPFNRGVESNDM FT ELMNAFFDEKTRELVTLAKGRGLTDCGIQTRWRYDGDRFRLVRYAEEPSCDSWHGPDAW FT PTLWITR" FT CDS complement(246296..246871) FT /transl_table=11 FT /gene="STY2714" FT /gene_synonym="yffH" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yffH (YFFH_ECOLI); Fasta hit FT to YFFH_ECOLI (191 aa), 87% identity in 191 aa overlap" FT /db_xref="GOA:Q8XG64" FT /db_xref="HSSP:1VIU" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/Swiss-Prot:Q8XG64" FT /protein_id="CAD07707.1" FT /translation="MSQTITLIKDKILSDNYFTLRNITYDLTRRNGEVIRHKREVYDRG FT NGATILLYNSTKKTVVLVRQFRVATWVNGNQDGMLIETCAGLLDNDEPEVCIRKEAIEE FT TGYDVGEVRKIFELYMSPGGVTELIHFFIAEYHDSERASIGGGVEDEEIEVLELPFSRA FT LEMVRSGEIRDGKTVLLLNYLQTSHLMD" FT misc_feature complement(246341..246364) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS complement(246877..246880) FT /note="possible RBS" FT RBS 247063..247066 FT /note="possible RBS" FT CDS 247075..248373 FT /transl_table=11 FT /gene="STY2716" FT /product="putative exported protein" FT /note="Possible orthologue of E. coli YFEW_ECOLI; Fasta hit FT to YFEW_ECOLI (434 aa), 73% identity in 432 aa overlap. FT Contains probable N-terminal signal sequence" FT /db_xref="InterPro:IPR001466" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z4S7" FT /protein_id="CAD07708.1" FT /translation="MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDG FT WIQNQIDAGYPSINLLVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNT FT KMYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKDKLRIIDILHHVAGFPA FT DPQYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMP FT LDRYVETTIYKPLGLKHTVFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQ FT VHDEKAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGYGNVKLFDNKTVAQFTRRSPE FT DATFGLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPHSP FT VANPKVNPNVFVSGLLPAATYGWIVDQIYGSLK" FT CDS complement(248822..250681) FT /transl_table=11 FT /gene="STY2717" FT /gene_synonym="aegA" FT /product="putative oxidoreductase" FT /note="Fasta hit to YGFT_ECOLI (639 aa), 51% identity in FT 649 aa overlap" FT /note="Orthologue of E. coli yffG (AEGA_ECOLI); Fasta hit FT to AEGA_ECOLI (659 aa), 81% identity in 651 aa overlap. FT Expressed in E. coli under anaerobic conditions. This FT sequence contains an internal deletion of 33 aa with FT respect to the corresponding E. coli sequence" FT /db_xref="GOA:Q8Z4S6" FT /db_xref="HSSP:1K0T" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q8Z4S6" FT /protein_id="CAD07709.1" FT /translation="MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTPQRYQPRITVI FT KHQRQRSAVTCHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFGTMQM FT VLTPVAPNQFKASAHKCDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLRTAR FT QEIRPWHTVDTQHSGTACSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAAQAER FT EAARCLTCGEHSICEWTCPLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITGRVCPQ FT DRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDLSDVQKSDKRVAIIGAGPAGL FT ACADVLARRREIFSAMGIRFELNCEVGKDISLETLLESYDAVFVGVGTYRSMKADLPNE FT DAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTAMDCVRTALRHGA FT ANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRASGIRFLRTRLG FT EPDGQGRRRPVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNWGRIAASVESE FT FRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGILDWLAK" FT misc_feature complement(248906..249376) FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 67.10, E-value FT 4.8e-19" FT misc_feature complement(250373..250444) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 32.90, E-value 7.3e-06" FT misc_feature complement(250388..250423) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT misc_feature complement(250631..250648) FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT RBS complement(250687..250692) FT /note="possible RBS" FT RBS 250856..250859 FT /note="possible RBS" FT CDS 250867..252567 FT /transl_table=11 FT /gene="STY2718" FT /gene_synonym="narQ" FT /product="nitrate/nitrite sensor protein NarQ" FT /EC_number="2.7.3.-" FT /note="Fasta hit to NARX_ECOLI (598 aa), 31% identity in FT 594 aa overlap" FT /note="Orthologue of E. coli narQ (NARQ_ECOLI); Fasta hit FT to NARQ_ECOLI (566 aa), 88% identity in 563 aa overlap" FT /db_xref="GOA:Q8Z4S5" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q8Z4S5" FT /protein_id="CAD07710.1" FT /translation="MTVKRPVSASLAKAFFYIVLLSILSTGSALLTLTSSLRDAEAINI FT AGSLRMQSYRLGYDLQSRSPQINAHRQLFQHALNSPVLQNLNAWYVPQAVKTRYARLHA FT NWLEMNSRLQDGDIVWYQSNINNYVDQIDLFVLALQHYAERKVMLVVAISLAGGIGIFT FT LVFFTLRRIRQQVVRPLNQLVTASQRIEHGQFAPLPLDTSLPNELGLLAKTFSQMSSEL FT HKLYRSLEASVEEKTHDLHEAHRRLEVLYQCSQALNTSQIDVHCFRHILQIVREHDAAW FT YLELTVGDNWRISEGTQSPDLPMQMLPVTMQDTVYGELHWQSPNVNASTPLLNSVSTML FT GRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRAIPEDNAGAQ FT SIMADFSRALNDAYRQLRELLTTFRLTLQQADLPSALHEMLEDLQSQTPAKLKLDCRLP FT TLALDAQMQVHLLQIVREAVLNAIKHANASEIAVSCVTAPDGDHTVYIRDNGIGIGEPH FT EPAGHYGLNIMRERAERLGGTLNFSQPSGGGTLVSISFRSSNKEESQLT" FT misc_feature 251326..251538 FT /note="Pfam match to entry PF00672 DUF5, HAMP domain, score FT 58.10, E-value 1.9e-13" FT misc_feature 251995..252534 FT /note="Pfam match to entry PF00512 signal, Histidine FT kinase, score -9.60, E-value 0.00015" FT RBS 252738..252742 FT /note="possible RBS" FT misc_feature 252752..255832 FT /note="Pfam match to entry PF00873 ACR_tran, AcrB/AcrD/AcrF FT family, score 1948.30, E-value 0" FT CDS 252752..255865 FT /transl_table=11 FT /gene="STY2719" FT /gene_synonym="acrD" FT /product="putative efflux pump" FT /note="Similar to Pseudomonas aeruginosa multidrug FT resistance protein MexB mexB SW:MEXB_PSEAE (P52002) (1046 FT aa) fasta scores: E(): 0, 61.7% id in 1032 aa" FT /note="Fasta hit to ACRF_ECOLI (1034 aa), 63% identity in FT 1032 aa overlap" FT /note="Fasta hit to ACRB_ECOLI (1049 aa), 66% identity in FT 1036 aa overlap" FT /note="Fasta hit to YHIV_ECOLI (1037 aa), 60% identity in FT 1032 aa overlap" FT /note="Orthologue of E. coli acrD (ACRD_ECOLI); Fasta hit FT to ACRD_ECOLI (1037 aa), 94% identity in 1037 aa overlap" FT /db_xref="GOA:Q8Z4S4" FT /db_xref="HSSP:1IWG" FT /db_xref="InterPro:IPR004764" FT /db_xref="UniProtKB/TrEMBL:Q8Z4S4" FT /protein_id="CAD07711.1" FT /translation="MANFFIDRPIFAWVLAILLCLTGALAIFSLPVEQYPDLAPPNVRI FT TANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQATITLSFIAGTDPDEAV FT QQVQNQLQSAMRKLPQAVQDQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQ FT DPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLGGT FT PSVDKQALNATINAQSLLQTPQQFRDITLRVNQDGSEVKLGDVATVELGAEKYDYLSRF FT NGNPASGLGVKLASGANEMATAKLVLDRLNELAQYFPHGLEYKIAYETTSFVKASIIDV FT VKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMV FT LAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAF FT FGGTTGAIYRQFSITIVSAMVLSVLVAMILTPALCATLLKPLHKGEQHGQRGFFGWFNR FT TFNRNAERYEKGVAKILHRSLRWILIYVLLLGGMVFLFLRLPTSFLPQEDRGMFTTSIQ FT LPSGSTQQQTLKVVEKVENYYFTHEKNNIMSVFSTVGSGPGGNGQNVARMFVRLKDWDA FT RDPTTGSSFAIIERATKAFNQIKEARVFASSPPAISGLGSSAGFDMELQDHAGAGHDAL FT MAARDQLIELAGKNSSLTRVRHNGLDDSPQLQIDIDQRKAQALGVSIDDINDTLQTAW |