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EBI DbfetchID AL627273; SV 1; linear; genomic DNA; STD; PRO; 250050 BP. XX AC AL627273; XX DT 25-OCT-2001 (Rel. 69, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 7) XX DE Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete DE chromosome; segment 9/20 XX KW . XX OS Salmonella enterica subsp. enterica serovar Typhi OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. XX RN [1] RP 1-250050 RX DOI; 10.1038/35101607 RX PUBMED; 11677608. RA Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J., RA Churcher C., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M., RA Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A., RA Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T., RA Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A., RA Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M., RA Rutherford K., Simmonds M., Skelton J., Stevens K., Whitehead S., RA Barrell B.G.; RT "Complete genome sequence of a multiple drug resistant Salmonella enterica RT serovar Typhi CT18"; RL Nature 413(6858):848-852(2001). XX RN [2] RP 1-250050 RA Parkhill J.; RT ; RL Submitted (25-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. XX DR EMBL-CON; AL513382. DR GOA; P64047. DR InterPro; IPR014722; Transl_SH3-like_sub. DR RFAM; RF00514; His_leader. DR UniProtKB/Swiss-Prot; P64047; EFPL_SALTI. XX CC E-mail: parkhill@sanger.ac.uk CC CC Notes: CC Details of S. typhi sequencing at the Sanger Centre CC are available on the World Wide Web. CC (URL, http://www.sanger.ac.uk/Projects/S_typhi/) XX FH Key Location/Qualifiers FH FT source 1..250050 FT /organism="Salmonella enterica subsp. enterica serovar FT Typhi" FT /strain="CT18" FT /mol_type="genomic DNA" FT /db_xref="taxon:90370" FT CDS complement(109..1566) FT /transl_table=11 FT /gene="STY2216" FT /product="putative inner membrane protein" FT /note="Orthologue of E. coli YEEO_ECOLI; Fasta hit to FT YEEO_ECOLI (547 aa), 81% identity in 488 aa overlap" FT /note="Unknown function. Contains hydrophobic, possible FT membrane-spanning regions" FT /db_xref="GOA:Q8Z5P2" FT /db_xref="InterPro:IPR002528" FT /db_xref="UniProtKB/TrEMBL:Q8Z5P2" FT /protein_id="CAD02374.1" FT /translation="MWFQLSSLRSILNVSTALRQVVVRTPWYAKRKSYKVLFWREITPL FT AIPIFLENTCVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVIMAFFAAIDLGTTVVVA FT FSLGKRDRRRARAAARQSLVIMTLFAVVLAVVIHYFGSEIINIVAGEATPEVKGLALTY FT LELTVLSYPAAAIALIGSGALRGAGNTKIPLMINGGMNILNIVISSILIYGAFSWQGLG FT FAGAGLGLTISRYIGAVAIIWVLMIGFNPALRIPLKSYLKPLNFGIIWEVMGIGIPASI FT ESVLFNGGKLLTQMFVAGMGTNVIAGNFIAFSVAALINLPGNALGSASTIITGKRLGTG FT QIGQAERQLRHVFWMSTIVLTAIAWGTAPFAGLFASFYTQEQDVKEVVKVLLWLNAAFM FT PIWAAAWVLPSGFKGARDVRFAMWVSMLGMWGCRVVAGYTLGIVLGMGVVGVWLGMFLD FT WAVRGALFYWRLISGRWLWRYLRVKRE" FT misc_feature complement(199..1044) FT /note="Pfam match to entry PF01554 UPF0013, Uncharacterized FT membrane protein family UPF0013, score 273.80, E-value FT 2.2e-78" FT tRNA 1726..1801 FT /note="tRNA Asn anticodon GTT, Cove score 87.13" FT CDS complement(1806..1976) FT /transl_table=11 FT /gene="STY2217" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5P1" FT /protein_id="CAD02375.1" FT /translation="MSVMAGASFSQRTARPPIKPPKTMDAKKPGKPYQVNRVKISSYFL FT NVSGLAGISRN" FT CDS complement(2027..2956) FT /transl_table=11 FT /gene="STY2218" FT /gene_synonym="erfK" FT /product="putative exported protein" FT /note="Similar to Salmonella typhimurium protein erfK/srfK FT precursor SW:ERFK_SALTY (P40680) (309 aa) fasta scores: FT E(): 0, 99.0% id in 309 aa. Contains probable N-terminal FT signal sequence" FT /note="Fasta hit to YNHG_ECOLI (334 aa), 47% identity in FT 288 aa overlap" FT /note="Fasta hit to YCFS_ECOLI (320 aa), 48% identity in FT 307 aa overlap" FT /note="Fasta hit to YBIS_ECOLI (306 aa), 66% identity in FT 283 aa overlap" FT /note="Orthologue of E. coli erfK (ERFK_ECOLI); Fasta hit FT to ERFK_ECOLI (310 aa), 79% identity in 305 aa overlap" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:Q8Z5P0" FT /protein_id="CAD02376.1" FT /translation="MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQN FT NTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNVAE FT MRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAKEGK FT TLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHV FT RVGTRVQIIDRPVKFSVEPDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGD FT DVDTSRVNEVLERRSGMPVNISAGRSGL" FT RBS complement(2964..2970) FT /note="possible RBS" FT CDS complement(3034..4104) FT /transl_table=11 FT /gene="STY2219" FT /gene_synonym="cobT" FT /product="nicotinate-nucleotide--dimethylbenzimidazole FT phosphoribosyl transferase" FT /EC_number="2.4.2.21" FT /note="Similar to Salmonella typhimurium FT nicotinate-nucleotide--dimethylbenzimidazole FT phosphoribosyltransferase SW:COBT_SALTY (Q05603) (356 aa) FT fasta scores: E(): 0, 97.8% id in 356 aa" FT /note="Orthologue of E. coli cobT (COBT_ECOLI); Fasta hit FT to COBT_ECOLI (359 aa), 78% identity in 356 aa overlap" FT /db_xref="GOA:Q8Z5N9" FT /db_xref="HSSP:1L5L" FT /db_xref="InterPro:IPR017846" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5N9" FT /protein_id="CAD02377.1" FT /translation="MQTLHALFRDIPAPDAEAMARAQQHIDGLLKPPGSLGRLETLAVQ FT LAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVSPKIVTAIQAANMTQGTTGVCVLAA FT QAGAKVHVIDVGIDAEPIPGVVDMRVARGCGNIAVGPAMSRSQAEALLLEVSRYTCDLA FT KRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIA FT INQPNPRDGIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAV FT RPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSGAALAMPIVEAACAMFHNMGE FT LAASNIVLPEGNANAT" FT misc_feature complement(3067..4065) FT /note="Pfam match to entry PF02277 DBI_PRT, FT Phosphoribosyltransferase, score 794.90, E-value 3.1e-235" FT CDS complement(4131..4874) FT /transl_table=11 FT /gene="STY2220" FT /gene_synonym="cobS" FT /product="cobalamin (5'-phosphate) synthase" FT /EC_number="2.-.-.-" FT /note="Similar to Salmonella typhimurium cobalamin FT [5'-phosphate] synthase cobS SW:COBS_SALTY (Q05602) (247 FT aa) fasta scores: E(): 0, 97.6% id in 247 aa" FT /note="Orthologue of E. coli cobS (COBS_ECOLI); Fasta hit FT to COBS_ECOLI (247 aa), 82% identity in 247 aa overlap" FT /db_xref="GOA:Q8Z5N8" FT /db_xref="InterPro:IPR003805" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5N8" FT /protein_id="CAD02378.1" FT /translation="MSKLFWAMLAFISRLPVPSRWSQGLDFEQYSRGIVMFPFIGLILG FT GISGLIFILLQPWCGIPLAALFCILALALLTGGFHLDGLADTCDGIFSARRRERMLEIM FT RDSRLGTHGGLALIFVLLAKILVVSELALRGTPMLAALAAACAAGRGSAVLLMYRHRYA FT REEGLGNVFIGKVSGRQTCITLGLAVIVATVLLLGMQGLATMVVTLAAIFILGQLLKRT FT LGGQTGDTLGAAIELGELIFLLALL" FT CDS complement(4871..5416) FT /transl_table=11 FT /gene="STY2221" FT /gene_synonym="cobU" FT /product="cobinamide kinase and guanylyltransferase" FT /note="Similar to Salmonella typhimurium bifunctional FT cobalamin biosynthesis protein cobP [includes: cobinamide FT kinase; cobinamide phosphate guanylyltransferase] cobU FT SW:COBU_SALTY (Q05599) (181 aa) fasta scores: E(): 0, 99.4% FT id in 181 aa" FT /note="Orthologue of E. coli cobU (COBU_ECOLI); Fasta hit FT to COBU_ECOLI (181 aa), 82% identity in 181 aa overlap" FT /db_xref="GOA:Q8Z5N7" FT /db_xref="HSSP:1CBU" FT /db_xref="InterPro:IPR003203" FT /db_xref="UniProtKB/TrEMBL:Q8Z5N7" FT /protein_id="CAD02379.1" FT /translation="MMILVTGGARSGKSRHAEALISDAPQVLYIATSQILDDEMAARIQ FT HHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWD FT YAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLA FT AAADEVWLVVSGIGVKIK" FT misc_feature complement(4877..5410) FT /note="Pfam match to entry PF02283 COBU, Cobalbumin FT biosynthesis enzyme, score 377.40, E-value 1.4e-109" FT RBS complement(4885..4888) FT /note="possible RBS" FT misc_feature complement(5375..5398) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(5413..6933) FT /transl_table=11 FT /gene="cbiP" FT /gene_synonym="STY2222" FT /product="putative cobyric acid synthase" FT /note="Similar to Salmonella typhimurium cobyric acid FT synthase cbiP SW:CBIP_SALTY (Q05597) (506 aa) fasta scores: FT E(): 0, 99.4% id in 506 aa" FT /db_xref="GOA:Q8Z5N6" FT /db_xref="InterPro:IPR011698" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5N6" FT /protein_id="CAD02380.1" FT /translation="MTQAVMLQGTASDVGKSVLVAGLCRIFYQDGLRTAPFKSQNMALN FT SGITPDGKEMGRAQIFQAEAAGITPDVRMNPVLLKPTSDRQAQVVLMGKVATNMDAVSY FT HDYKPRLREQILAVYNSLAQEYDVIVLEGAGSPAEINLRDRDIVNMGMAEMAQCPVILV FT ADIDRGGVFAAIYGTLALLHKQERDRVKGVIINKFRGDVALLYSGIEQIESLTGVPVLG FT VMPWLDVDLEDEDGVALQNDKYRGNAPRDITIAIVQLPHISNFTDFNALAAQPDVRIRY FT IRRPEALTDADLVILPGSKNTLSDLAWLRESGMADAVLQTHRQGVPVMGICGGYQMLGD FT TIVDEVESGLGTQPGLGLLNTITRFAQDKTTTQVNATMSGELPGWLAAAAGLPVRGYEI FT HMGETVLQEGCCTAMTLQKNGCSVADGAVTADGLAFGTYLHGLFDSDAFTRAVVNGLRA FT RKGLAPWETTFCYAEHKARQFDLLAEAMRQHIDIDKIYTIMQQHQEPV" FT RBS complement(5422..5426) FT /note="possible RBS" FT misc_feature complement(6232..6918) FT /note="Pfam match to entry PF01656 CBIA, Cobyrinic acid FT a,c-diamide synthase, score 374.90, E-value 8.3e-109" FT CDS complement(6930..7745) FT /transl_table=11 FT /gene="cbiO" FT /gene_synonym="STY2223" FT /product="putative cobalt transport ATP-binding protein FT CbiO" FT /note="Similar to Salmonella typhimurium cobalt transport FT ATP-binding protein CbiO cbiO SW:CBIO_SALTY (Q05596) (271 FT aa) fasta scores: E(): 0, 98.2% id in 271 aa" FT /note="Fasta hit to YCFV_ECOLI (233 aa), 32% identity in FT 224 aa overlap" FT /note="Fasta hit to FHUC_ECOLI (265 aa), 31% identity in FT 227 aa overlap" FT /note="Fasta hit to NIKE_ECOLI (268 aa), 30% identity in FT 219 aa overlap" FT /note="Fasta hit to PSTB_ECOLI (257 aa), 30% identity in FT 229 aa overlap" FT /note="Paralogue of E. coli sapF (SAPF_ECOLI); Fasta hit to FT SAPF_ECOLI (268 aa), 31% identity in 226 aa overlap" FT /db_xref="GOA:Q8Z5N5" FT /db_xref="InterPro:IPR005876" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5N5" FT /protein_id="CAD02381.1" FT /translation="MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFM FT NLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLR FT NLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEP FT TAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILMHGAPGE FT VFACTEAMEHAGLTQPWLVKLHTQLGLPLCKTETEFFHRMQKCAFREAS" FT RBS complement(6938..6942) FT /note="possible RBS" FT misc_feature complement(7110..7667) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 227.90, E-value 1.4e-64" FT misc_feature complement(7293..7337) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(7623..7646) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS complement(7751..7756) FT /note="possible RBS" FT CDS complement(7754..8431) FT /transl_table=11 FT /gene="cbiQ" FT /gene_synonym="STY2224" FT /product="putative cobalt transport protein CbiQ" FT /note="Similar to Salmonella typhimurium cobalt transport FT protein CbiQ cbiQ SW:CBIQ_SALTY (Q05598) (225 aa) fasta FT scores: E(): 0, 99.1% id in 225 aa. Contains hydrophobic, FT possible membrane-spanning regions" FT /db_xref="GOA:Q8Z5N4" FT /db_xref="InterPro:IPR012809" FT /db_xref="UniProtKB/TrEMBL:Q8Z5N4" FT /protein_id="CAD02382.1" FT /translation="MTGLDRLSYQSRWAHVAPQRKFLLWLAMMILAFVLPPVGQGIELL FT IIAGLSCWLLRISLWRWCRWMAIPFGFLLVGVITIIFSISREPQMLLAGISVGPYWIGI FT TRAGVVTANETFWRSLTALSATLWLVMNLPFPQLISLLKRAHIPRLLTEQILLTWRFLF FT ILLDEAVAIRRAQTLRFGYCSLPNGYRSLAMLTGLLFTRVLMRYQQMTTTLDIKLYQGD FT FHL" FT CDS complement(8418..8699) FT /transl_table=11 FT /gene="cbiN" FT /gene_synonym="STY2225" FT /product="putative cobalt transport protein CbiN" FT /note="Similar to Salmonella typhimurium cobalt transport FT protein CbiN cbiN SW:CBIN_SALTY (Q05595) (93 aa) fasta FT scores: E(): 0, 98.9% id in 93 aa. Contains probable FT N-terminal signal sequence. Contains hydrophobic, possible FT membrane-spanning region" FT /db_xref="GOA:Q8Z5N3" FT /db_xref="InterPro:IPR003705" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5N3" FT /protein_id="CAD02383.1" FT /translation="MKKTLMLLAMVVALVILPFFINHGGEYGGSDGEAESQIQALAPQY FT KPWFQPLYEPASGEIESLLFTLQGSLGAAVIFYILGYCKGKQRRDDRA" FT CDS complement(8701..9437) FT /pseudo FT /transl_table=11 FT /gene="cbiM" FT /gene_synonym="STY2226" FT /product="CbiM protein (pseudogene)" FT /note="Similar to Salmonella typhimurium CbiM protein cbiM FT SW:CBIM_SALTY (Q05594) (245 aa) fasta scores: E(): 0, FT 100.0% id in 137 aa in C-terminus. N-terminus is FT frameshifted at codon 89. The sequence has been checked and FT is believed to be correct" FT RBS complement(8707..8711) FT /note="possible RBS" FT misc_feature complement(8719..9114) FT /note="Pfam match to entry PF01891 CbiM, CbiM, score FT 158.30, E-value 1.3e-43" FT CDS complement(9434..10147) FT /transl_table=11 FT /gene="cbiL" FT /gene_synonym="STY2228" FT /product="precorrin-2 C20-methyltransferase" FT /EC_number="2.1.1.130" FT /note="Similar to Salmonella typhimurium precorrin-2 FT C20-methyltransferase cbiL SW:CBIL_SALTY (Q05593) (237 aa) FT fasta scores: E(): 0, 99.2% id in 237 aa and Pseudomonas FT denitrificans precorrin-2 C20-methyltransferase cobI FT SW:COBI_PSEDE (P21639) (244 aa) fasta scores: E(): 3.2e-18, FT 31.3% id in 243 aa" FT /db_xref="GOA:Q8Z5N2" FT /db_xref="HSSP:1CBF" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:Q8Z5N2" FT /protein_id="CAD02385.1" FT /translation="MNGKLYALSTGPGAPDLITVRAARILGSLDILYAPAGRKGGDSLA FT LSIVRDYLGEQTEVRCCHFPMSADGAEKEAVWNEVAAALTAEVEAGKQVGFITLGDAML FT FSTWIFLLQRIGCPEWLEIVPGVTSFAAIAARAKMPLAIERQSLAVISCTAPEAEIAQA FT LQQHDSLVLMKVYGRFARIKALLAQAGLLECALMMSEATLPGEQCWRHLHEVNDDRALP FT YFSTILVNKQWEYAE" FT misc_feature complement(9500..10138) FT /note="Pfam match to entry PF00590 TP_methylase, FT Tetrapyrrole (Corrin/Porphyrin) Methylases., score 232.60, FT E-value 5.7e-66" FT misc_feature complement(9770..9868) FT /note="PS00840 Uroporphyrin-III C-methyltransferase FT signature 2" FT misc_feature complement(10082..10126) FT /note="PS00839 Uroporphyrin-III C-methyltransferase FT signature 1" FT CDS complement(10144..10937) FT /pseudo FT /transl_table=11 FT /gene="cbiK" FT /gene_synonym="STY2229" FT /product="putative cobalamin biosynthethesis protein FT (pseudogene)" FT /note="Similar to Salmonella typhimurium CbiK protein cbiK FT SW:CBIK_SALTY (Q05592) (264 aa) fasta scores: E(): 0, 99.1% FT id in 219 aa and to Porphyromonas gingivalis heme-binding FT protein Pga30 pga30 TR:Q9RMI6 (EMBL:AF195649) (293 aa) FT fasta scores: E(): 3.6e-25, 37.2% id in 215 aa. N-terminus FT is frameshifted after codon 20. There is an alternative FT start at codon 23. The sequence has been checked and is FT believed to be correct" FT RBS complement(10152..10157) FT /note="possible RBS" FT CDS complement(10940..11730) FT /pseudo FT /transl_table=11 FT /gene="cbiJ" FT /gene_synonym="STY2231" FT /product="precorrin-6x reductase (pseudogene)" FT /EC_number="1.3.1.54" FT /note="Similar to Salmonella typhimurium precorrin-6x FT reductase cbiJ SW:CBIJ_SALTY (Q05591) (263 aa) fasta FT scores: E(): 0, 92.5% id in 227 aa. Frameshifted at FT C-terminus after codon 212. The sequence has been checked FT and is believed to be correct" FT RBS complement(10942..10949) FT /note="possible RBS" FT CDS complement(11727..12452) FT /transl_table=11 FT /gene="cbiH" FT /gene_synonym="STY2232" FT /product="precorrin-3 C17-methyltransferase" FT /EC_number="2.1.1.131" FT /note="Similar to Salmonella typhimurium precorrin-3 FT C17-methyltransferase cbiH SW:CBIH_SALTY (Q05590) (241 aa) FT fasta scores: E(): 0, 99.6% id in 241 aa" FT /db_xref="GOA:Q8Z5N1" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:Q8Z5N1" FT /protein_id="CAD02388.1" FT /translation="MLSVIGIGPGSQAMMTMEAIEALQAAEIVVGYKTYTHLVKAFTGD FT KQVIKTGMCKEIERCQAAIELAQAGHNVALISSGDAGIYGMAGLVLELVSKQKLDVEVR FT LIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYNPRS FT RGREGHLARAFDLLAASKSAQTPVGVVKSAGRKKEEKWLTTLGDMDFEPVDMTSLVIVG FT NKTTYVQDGLMITPRGYTL" FT RBS complement(11739..11743) FT /note="possible RBS" FT misc_feature complement(11826..12452) FT /note="Pfam match to entry PF00590 TP_methylase, FT Tetrapyrrole (Corrin/Porphyrin) Methylases., score 259.60, FT E-value 4.1e-74" FT CDS complement(12452..13507) FT /transl_table=11 FT /gene="cbiG" FT /gene_synonym="STY2233" FT /product="CbiG protein" FT /note="Similar to Salmonella typhimurium CbiG protein cbiG FT SW:CBIG_SALTY (Q05631) (351 aa) fasta scores: E(): 0, 99.4% FT id in 351 aa" FT /db_xref="GOA:Q8Z5N0" FT /db_xref="InterPro:IPR002750" FT /db_xref="UniProtKB/TrEMBL:Q8Z5N0" FT /protein_id="CAD02389.1" FT /translation="MNTVKPESIALFCLTPGGVALAKRLAAMLPLTCFTSEKLREEGFI FT PFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVISL FT LSGHAGGANALTRYLAGMLGADPVITTATDVNEMSALDTLAFQLNARMSDLRTAVKTVN FT QMLVSHQRVGLWWDAELTEEIGQCDIRGFIPVDDLQRLPELDALICVSLRNDLPELPVL FT HWKLVPQRVVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGEPGLIQ FT LASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVGSVSGPAAWLLSQGQLLGETLRE FT QGVTITLGVSH" FT misc_feature complement(12461..13291) FT /note="Pfam match to entry PF01890 CbiG, CbiG, score FT 552.80, E-value 2.3e-162" FT RBS complement(12463..12466) FT /note="possible RBS" FT CDS complement(13488..14261) FT /transl_table=11 FT /gene="cbiF" FT /gene_synonym="STY2234" FT /product="precorrin-4 C11-methyltransferase" FT /EC_number="2.1.1.133" FT /note="Identical to Salmonella typhimurium precorrin-4 FT C11-methyltransferase cbiF SW:CBIF_SALTY (Q05630) (257 aa) FT fasta scores: E(): 0, 100.0% id in 257 aa" FT /db_xref="GOA:P0A2H0" FT /db_xref="HSSP:1CBF" FT /db_xref="InterPro:IPR000878" FT /db_xref="UniProtKB/Swiss-Prot:P0A2H0" FT /protein_id="CAD02390.1" FT /translation="MSETFDPRCVWFVGAGPGDRELITLKGYRLLQQAQVVIYAGSLIN FT TELLDYCPAQAERYDSAELHLEQIIELMAAGVKAGKTVVRLQTGDVSLYGSVREQGEEL FT TRRGIDWQVVPGVSAFLGAAAELGVEYTVPEVSQSLIITRLEGRTPVPAREQLEAFASH FT QTSMAIYLSVQRIHRVAERLIAGGYPATTPVAVIYKATWPESQTVRGTLADISDKVRDA FT GIRKTALILVGNFLGKEYHYSRLYAADFSHEYRKA" FT misc_feature complement(13614..14237) FT /note="Pfam match to entry PF00590 TP_methylase, FT Tetrapyrrole (Corrin/Porphyrin) Methylases., score 289.90, FT E-value 3.3e-83" FT misc_feature complement(13914..14015) FT /note="PS00840 Uroporphyrin-III C-methyltransferase FT signature 2" FT misc_feature complement(14016..14039) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(14181..14225) FT /note="PS00839 Uroporphyrin-III C-methyltransferase FT signature 1" FT CDS complement(14245..14823) FT /transl_table=11 FT /gene="cbiT" FT /gene_synonym="STY2235" FT /product="precorrin-8W decarboxylase" FT /EC_number="1.-.-.-" FT /note="Similar to Salmonella typhimurium precorrin-8W FT decarboxylase cbiT SW:CBIT_SALTY (Q05632) (192 aa) fasta FT scores: E(): 0, 99.5% id in 192 aa" FT /db_xref="GOA:Q8Z5M9" FT /db_xref="HSSP:1L3I" FT /db_xref="InterPro:IPR013217" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5M9" FT /protein_id="CAD02391.1" FT /translation="MKDELFLRGENVPMTKEAVRALALSKLELHRASHLIDVGAGTGSV FT SIEAALQFPSLQVTAIERNPAALRLLDENRQRFACGNIDILPGEAPMTITGKADAVFMG FT GSGGHLTALIDWAMGHLHPGGRLVMTFILQENLHSALAHLVHIGACRMDCVQLQLSSLT FT PLGAGHYFKPNNPVFVIACQKEENHVRDI" FT RBS complement(14268..14274) FT /note="possible RBS" FT misc_feature complement(14311..14358) FT /note="PS00012 Phosphopantetheine attachment site" FT CDS complement(14813..15418) FT /transl_table=11 FT /gene="cbiE" FT /gene_synonym="STY2236" FT /product="precorrin-6Y C5,15-methyltransferase FT [decarboxylating]" FT /EC_number="2.1.1.132" FT /note="Identical to Salmonella typhimurium precorrin-6Y FT C5,15-methyltransferase [decarboxylating] cbiE FT SW:CBIE_SALTY (Q05629) (201 aa) fasta scores: E(): 0, FT 100.0% id in 201 aa" FT /db_xref="GOA:P0A2H2" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/Swiss-Prot:P0A2H2" FT /protein_id="CAD02392.1" FT /translation="MLTVVGMGPAGRHLMTPAALEAIDHADALAGGKRHLAQFPAFGGE FT RFTLGADIGALLSWIAARRDKGIVVLASGDPLFYGIGTRLVAHFGIEQVRIIPGISAVQ FT YLCAQAGIDMNDMWLTSSHGRCVSFEQLANHRKVAMVTDARCGPREIARELVARGKGHR FT LMVIGENLAMENERIHWLPVSAVNADYEMNAVVILDER" FT misc_feature complement(14858..15418) FT /note="Pfam match to entry PF00590 TP_methylase, FT Tetrapyrrole (Corrin/Porphyrin) Methylases., score 214.70, FT E-value 1.3e-60" FT CDS complement(15412..16551) FT /transl_table=11 FT /gene="cbiD" FT /gene_synonym="STY2237" FT /product="CbiD protein" FT /note="Similar to Salmonella typhimurium CbiD protein cbiD FT SW:CBID_SALTY (Q05628) (379 aa) fasta scores: E(): 0, 98.7% FT id in 379 aa" FT /db_xref="GOA:Q8Z5M8" FT /db_xref="InterPro:IPR002748" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5M8" FT /protein_id="CAD02393.1" FT /translation="MSELSFDAPVWRHGKALRKGYTTGSCATAAAKVAELMVLRQHLIH FT QVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGEIT FT LTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGEVRA FT QKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGE FT RFVREQMGVDTQAVVTMSNFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHI FT ADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLARRICLRVM FT QMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC" FT RBS complement(15424..15430) FT /note="possible RBS" FT misc_feature complement(15619..16485) FT /note="Pfam match to entry PF01888 CbiD, CbiD, score FT 617.20, E-value 9.4e-182" FT CDS complement(16551..17030) FT /pseudo FT /transl_table=11 FT /gene="cbiC" FT /gene_synonym="STY2238" FT /product="precorrin-8X methylmutase (pseudogene)" FT /EC_number="5.4.1.2" FT /note="Similar to Salmonella typhimurium precorrin-8X FT methylmutase cbiC SW:CBIC_SALTY (Q05601) (210 aa) fasta FT scores: E(): 0, 75.2% id in 210 aa. Contains a 50 aa FT deletion from aa 110-160 with respect to the Salmonella FT typhimurium orthologue" FT /db_xref="PSEUDO:CAD02394.1" FT RBS complement(16556..16560) FT /note="possible RBS" FT RBS complement(17039..17042) FT /note="possible RBS" FT CDS complement(17041..18000) FT /transl_table=11 FT /gene="cbiB" FT /gene_synonym="STY2239" FT /product="CbiB protein" FT /note="Similar to Salmonella typhimurium CbiB protein cbiB FT SW:CBIB_SALTY (Q05600) (319 aa) fasta scores: E(): 0, 98.1% FT id in 319 aa and Pseudomonas denitrificans cobalamin FT biosynthesis protein CobD cobD SW:COBD_PSEDE (P21634) (323 FT aa) fasta scores: E(): 0, 37.9% id in 319 aa. Contains FT hydrophobic, possible membrane-spanning regions" FT /db_xref="GOA:Q8Z5M7" FT /db_xref="InterPro:IPR004485" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5M7" FT /protein_id="CAD02395.1" FT /translation="MTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQRIVRRYCP FT GDKALRIGGGVMWVVVVGVTWGVAWGVLALAQRIHPWFGWSVEVWMIFTTLAGRSLARA FT AQEVERPLRENDLAESRIKLSWIVGRDTSQLQPAQIYRAVVETVAENTVDGIIAPLFFL FT FLGGAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLGIAAG FT LCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKPWIGDA FT QRGISVDDISRTIRLMWVASTLALALFIAARCGLSGVA" FT CDS complement(17997..19421) FT /transl_table=11 FT /gene="cbiA" FT /gene_synonym="STY2240" FT /product="cobyrinic acid A,C-diamide synthase" FT /note="Similar to Salmonella typhimurium cobyrinic acid FT A,C-diamide synthase cbiA SW:CBIA_SALTY (P29946) (459 aa) FT fasta scores: E(): 0, 98.2% id in 452 aa, and to Bacillus FT megaterium cobyrinic acid A,C-diamide synthase cobB or cbiA FT SW:COBB_BACME (O87698) (460 aa) fasta scores: E(): 0, 38.1% FT id in 452 aa. Note that the N-terminal 7 aa of the FT Salmonella typhimurium orthologue have been replaced with a FT 23 aa N-terminal sequence following a frameshift event. It FT is unclear as to whether expression of an active protein is FT affected by this, or not" FT /db_xref="GOA:Q8Z5M6" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/TrEMBL:Q8Z5M6" FT /protein_id="CAD02396.1" FT /translation="MRVPVYPYHPEQDQGNGGKASRFILAGTGSGCGKTTVTLGLLRLL FT QKRALRVQPFKVGPDYLDTGWHTAICGVASRNLDSFMLPPPVLNALFCEQMRQADIAVI FT EGVMGLYDGYGVDPNYCSTAAMAKQLGCPVILLVDGKAVSTSLAAIVMGFQHFDPTLNL FT AGVIVNRVTSDAHYQLLKNAIEHYCSLPVLGYVPPCDGVALPERHLGLITARESLVNQQ FT SWHDFAATLEQTVDVDALLSLSLLSALPAGMWPERPDNTAGAGLTLALADDEAFNFYYP FT DNIDLLERAGVNIVRFSPLHDRALPDCQMIWLGGGYPELYAADLAANTAMLKHLRAAHQ FT RGVAIYAECGGLMYLGSTLEDSGGEIHQMANIIPGHSKMGKRLTRFGYCEAQAMQPTLL FT AVPGEIVRGHEFHYSDFIPETPAVMACRKVRDGRVLQEWTGGWQTGNTFASYLHVHFAQ FT RPEMLQHWLAAARRVL" FT RBS complement(18009..18012) FT /note="possible RBS" FT misc_feature complement(18666..19358) FT /note="Pfam match to entry PF01656 CBIA, Cobyrinic acid FT a,c-diamide synthase, score 329.30, E-value 4.3e-95" FT CDS complement(19973..20887) FT /transl_table=11 FT /gene="pocR" FT /gene_synonym="STY2241" FT /product="pdu/cob regulatory protein PocR" FT /note="Similar to Salmonella typhimurium regulatory protein FT PocR pocR SW:POCR_SALTY (Q05587) (303 aa) fasta scores: FT E(): 0, 99.3% id in 304 aa" FT /db_xref="GOA:Q8Z5M5" FT /db_xref="InterPro:IPR018771" FT /db_xref="UniProtKB/TrEMBL:Q8Z5M5" FT /protein_id="CAD02397.1" FT /translation="MISASALNSELINKIAQDFAQATTGLAVVVVNIHGDEISELFNFT FT PFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFV FT LCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCL FT KKQLNFVVIKDNPQQSEANKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLS FT PYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFR FT QTYQVTPQAYRQQINENSHPPSI" FT misc_feature complement(20003..20263) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 151.80, E-value 1.2e-41" FT misc_feature complement(20024..20152) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature" FT RBS complement(20897..20900) FT /note="possible RBS" FT CDS complement(21104..21898) FT /transl_table=11 FT /gene="pduF" FT /gene_synonym="STY2242" FT /product="propanediol diffusion facilitator" FT /note="Similar to Salmonella typhimurium propanediol FT diffusion facilitator pduF SW:PDUF_SALTY (P37451) (264 aa) FT fasta scores: E(): 0, 97.3% id in 264 aa. Contains FT hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z5M4" FT /db_xref="HSSP:1FX8" FT /db_xref="InterPro:IPR012269" FT /db_xref="UniProtKB/TrEMBL:Q8Z5M4" FT /protein_id="CAD02398.1" FT /translation="MNDSLKAQCGAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICII FT WGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGDLLAYV FT LYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMA FT LTDDGNGIPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAM FT SGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCKL" FT misc_feature complement(21152..21898) FT /note="Pfam match to entry PF00230 MIP, Major intrinsic FT protein, score 461.80, E-value 9.1e-150" FT misc_feature complement(21683..21709) FT /note="PS00221 MIP family signature" FT RBS complement(21903..21910) FT /note="possible RBS" FT RBS 22414..22418 FT /note="possible RBS" FT CDS 22423..22707 FT /transl_table=11 FT /gene="pduA" FT /gene_synonym="STY2243" FT /product="putative propanediol utilization protein PduA" FT /note="Similar to Salmonella typhimurium propanediol FT utilization protein PduA pduA SW:PDUA_SALTY (P37448) (97 FT aa) fasta scores: E(): 5.7e-31, 100.0% id in 90 aa and FT identical to Salmonella enterica serovar Typhimurium PduA FT pduA TR:AAB84107 (EMBL:AF026270) (94 aa) fasta scores: E(): FT 1.1e-32, 100.0% id in 94 aa. S. typhi pduA is probably not FT essential for propanediol catabolism (by similarity), but FT may be involved (cf. homologue in the eut operon). The FT Salmonella enterica homologue has been implicated in FT polyhedral body formation which may protect the cell from FT toxic metabolites, or protect the dehydratase from oxygen" FT /db_xref="InterPro:IPR000249" FT /db_xref="UniProtKB/Swiss-Prot:P0A1C8" FT /protein_id="CAD02399.1" FT /translation="MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTV FT IVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ" FT misc_feature 22429..22689 FT /note="Pfam match to entry PF00936 Bact_microcomp, FT Bacterial microcompartments protein family, score 208.40, FT E-value 1.1e-58" FT misc_feature 22486..22545 FT /note="PS01139 Bacterial microcompartiments proteins FT signature" FT CDS 22815..23516 FT /transl_table=11 FT /gene="pduB" FT /gene_synonym="STY2244" FT /product="putative propanediol utilization protein PduB" FT /note="Similar to Salmonella typhimurium propanediol FT utilization protein PduB pduB SW:PDUB_SALTY (P37449) (233 FT aa) fasta scores: E(): 0, 99.1% id in 233 aa. S. typhi pduB FT is probably not essential for propanediol catabolism (by FT similarity), but may be involved (cf. homologue in the eut FT operon). The Salmonella enterica homologue has been FT implicated in polyhedral body formation which may protect FT the cell from toxic metabolites, or protect the dehydratase FT from oxygen" FT /db_xref="GOA:Q8Z5M3" FT /db_xref="InterPro:IPR009193" FT /db_xref="UniProtKB/TrEMBL:Q8Z5M3" FT /protein_id="CAD02400.1" FT /translation="MAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIG FT ILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGI FT EVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPIGRACGVIVGAPASVGVL FT MADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVTSAREIGKTVLATLG FT SEPKNDRPSYI" FT RBS 23524..23527 FT /note="possible RBS" FT misc_feature 23535..25196 FT /note="Pfam match to entry PF02286 Dehydratase_LU, FT Dehydratase large subunit, score 1526.40, E-value 0" FT CDS 23535..25199 FT /transl_table=11 FT /gene="pduC" FT /gene_synonym="STY2245" FT /product="glycerol dehydratase large subunit" FT /EC_number="4.2.1.30" FT /note="Similar to Salmonella typhimurium glycerol FT dehydratase large subunit pduC SW:DHAB_SALTY (P37450) (554 FT aa) fasta scores: E(): 0, 99.6% id in 554 aa and Klebsiella FT oxytoca diol dehydratase alpha subunit pddA TR:Q59470 FT (EMBL:D45071) (554 aa) fasta scores: E(): 0, 99.6% id in FT 554 aa" FT /db_xref="GOA:Q8Z5M2" FT /db_xref="HSSP:1EEX" FT /db_xref="InterPro:IPR003206" FT /db_xref="UniProtKB/TrEMBL:Q8Z5M2" FT /protein_id="CAD02401.1" FT /translation="MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVN FT GAVTELDGKPVSEFDLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIVPL FT TTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAW FT RGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAET FT ISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEA FT RCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECSSSNDQTFTH FT SDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGG FT LRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIK FT FAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSA FT VNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID" FT CDS 25210..25884 FT /transl_table=11 FT /gene="pduD" FT /gene_synonym="STY2246" FT /product="diol dehydratase medium subunit" FT /note="Similar to Salmonella typhimurium diol dehydratase FT medium subunit pduD TR:O31041 (EMBL:AF026270) (224 aa) FT fasta scores: E(): 0, 98.2% id in 224 aa and Klebsiella FT oxytoca diol dehydratase beta subunit pddB TR:Q59471 FT (EMBL:D45071) (224 aa) fasta scores: E(): 0, 95.1% id in FT 224 aa" FT /db_xref="HSSP:1DIO" FT /db_xref="InterPro:IPR010254" FT /db_xref="UniProtKB/TrEMBL:Q8Z5M1" FT /protein_id="CAD02402.1" FT /translation="MEINEKLLRQIIEDVLRDMKGSDKPVSFNTPAASTAPQTAAPAGD FT GFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGIRARV FT IRCFKSSDVAFVAVEGNRLSGSGISIGIQSKDTTVIHQQGLPPLSNLELFPQAPLLTLE FT TYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRV FT TL" FT misc_feature 25351..25875 FT /note="Pfam match to entry PF02288 Dehydratase_MU, FT Dehydratase medium subunit, score 427.90, E-value 9.1e-125" FT RBS 25887..25891 FT /note="possible RBS" FT CDS 25899..26420 FT /transl_table=11 FT /gene="pduE" FT /gene_synonym="STY2247" FT /product="diol dehydratase small subunit" FT /note="Similar to Salmonella typhimurium diol dehydratase FT small subunit pduE TR:O31042 (EMBL:AF026270) (173 aa) fasta FT scores: E(): 0, 99.4% id in 173 aa, and to Klebsiella FT oxytoca diol dehydratase gamma pddC TR:Q59472 (EMBL:D45071) FT (173 aa) fasta scores: E(): 0, 96.5% id in 173 aa" FT /db_xref="HSSP:1UC5" FT /db_xref="InterPro:IPR003207" FT /db_xref="UniProtKB/TrEMBL:Q8Z5M0" FT /protein_id="CAD02403.1" FT /translation="MNTDAIESMVRDVLSRMNSLQGDAPAAAPAAGGTSRSAKVSDYPL FT ANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPKTLRLQASIAKDAGRDRLAMN FT FERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLENRYQAKICAAFVREAAGLY FT VERKKLKGDD" FT misc_feature 25998..26408 FT /note="Pfam match to entry PF02287 Dehydratase_SU, FT Dehydratase small subunit, score 369.50, E-value 3.4e-107" FT RBS 26448..26451 FT /note="possible RBS" FT RBS 26616..26620 FT /note="possible RBS" FT CDS 26627..28459 FT /transl_table=11 FT /gene="pduG" FT /gene_synonym="STY2248" FT /product="PduG protein" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduG pduG TR:O31043 (EMBL:AF026270) (610 aa) fasta FT scores: E(): 0, 99.0% id in 610 aa and Klebsiella oxytoca FT diol dehydratase-reactivating factor large subunit ddrA FT TR:O68195 (EMBL:AF017781) (610 aa) fasta scores: E(): 0, FT 95.4% id in 608 aa. May be involved in removing inactive FT cofactor from the PduCDE dehydratase. Possibly also an FT adenosyltransferase (experimental)" FT /db_xref="HSSP:1NBW" FT /db_xref="InterPro:IPR009191" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L9" FT /protein_id="CAD02404.1" FT /translation="MRYIAGIDIGNSSTEVALARQDETGALTITHSALAENTGIKGTLR FT NVFGIQEALALVAKRAGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPK FT TPGGAGLGVGITITPEELLTRPADSSYILVVSSAFDFADIANVINASMRAGYQITGVIL FT QRDDGVLVSNRLEKSLPIVDEVLYIDCIPLGMLAAIEVAVPGKVIETLSNPYGIATVFN FT LNADETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNLELQAQGRTVRVDVAAGA FT EAIMKAVDGYGKLDNVNGEAGTNIGGMLEHVRQTMAELTNKPSSEIFIQDLLAVDTSVP FT VSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLNIDVQIGGAEAEAAILGA FT LTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIARELGLEDRYLA FT EEIKKYPLAKVESLFHLRHEDGSVQFFPTPLPPAVFARVCVVKPDELVPLPGDLALEKV FT RAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYR FT LVAGRGNIRGSEGPRNAVATGLILSWHKEFAYGQ" FT RBS 28436..28441 FT /note="possible RBS" FT CDS 28449..28799 FT /transl_table=11 FT /gene="pduH" FT /gene_synonym="STY2249" FT /product="PduH protein" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduH pduH TR:Q9XDN8 (EMBL:AF026270) (123 aa) fasta FT scores: E(): 0, 99.1% id in 111 aa and Klebsiella oxytoca FT diol dehydratase-reactivating factor small subunit ddrB FT TR:O68196 (EMBL:AF017781) (125 aa) fasta scores: E(): 0, FT 88.8% id in 116 aa. May be involved in removing inactive FT cofactor from the PduCDE dehydratase (in combination with FT pduG). A frameshift at codon 112 alters its C-terminus with FT respect to the homologues described above." FT /db_xref="HSSP:1NBW" FT /db_xref="InterPro:IPR010254" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L8" FT /protein_id="CAD02405.1" FT /translation="MDSNHSAPAIVITVINDCASLWHEVLLGIEEEGIPFLLQHHPAGD FT VVDSAWQAARSSPLLVGIACDRHSLVVHYKNLPASAPLFTLMHHQDSQAQRNTGNNAAR FT LVKGIPFRDLNS" FT RBS 28805..28809 FT /note="possible RBS" FT CDS 28819..29094 FT /transl_table=11 FT /gene="pduJ" FT /gene_synonym="STY2250" FT /product="putative propanediol utilization protein PduJ" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduJ pduJ TR:Q9XDN7 (EMBL:AF026270) (91 aa) fasta FT scores: E(): 4.2e-31, 100.0% id in 91 aa, Salmonella FT typhimurium propanediol utilization protein PduA pduA FT SW:PDUA_SALTY (P37448) (97 aa) fasta scores: E(): 6.7e-24, FT 84.9% id in 86 aa and Salmonella typhimurium ethanolamine FT utilization protein EutM precursor eutM or cchA FT SW:EUTM_SALTY (P41791) (96 aa) fasta scores: E(): 4.1e-18, FT 64.4% id in 87 aa. The Salmonella enterica homologue has FT been implicated in polyhedral body formation which may FT protect the cell from toxic metabolites, or protect the FT dehydratase from oxygen" FT /db_xref="InterPro:IPR000249" FT /db_xref="UniProtKB/TrEMBL:Q9XDN7" FT /protein_id="CAD02406.1" FT /translation="MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVM FT VRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPHSDVEAILPKSA" FT misc_feature 28822..29082 FT /note="Pfam match to entry PF00936 Bact_microcomp, FT Bacterial microcompartments protein family, score 190.50, FT E-value 2.7e-53" FT misc_feature 28879..28938 FT /note="PS01139 Bacterial microcompartiments proteins FT signature" FT CDS 29098..29580 FT /transl_table=11 FT /gene="pduK" FT /gene_synonym="STY2251" FT /product="putative propanediol utilization protein PduK" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduK pduK TR:Q9XDN6 (EMBL:AF026270) (160 aa) fasta FT scores: E(): 0, 98.1% id in 160 aa. The Salmonella enterica FT homologue has been implicated in polyhedral body formation FT which may protect the cell from toxic metabolites, or FT protect the dehydratase from oxygen" FT /db_xref="InterPro:IPR000249" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L7" FT /protein_id="CAD02407.1" FT /translation="MANKEHRVKQSLGLLEVCGLALAISCADIMAKSASITLLALEKTN FT GSGWMVIKIAGDVASVQAAITTGAQFAEQRNGLVAHKVIARPGEGILLAETPSPSVIEP FT EPEASEIADVVSEAPAEEAPQESELVSCNLCLDPKCPRQKGEPRTLCIHSGKRGEA" FT misc_feature 29122..29385 FT /note="Pfam match to entry PF00936 Bact_microcomp, FT Bacterial microcompartments protein family, score 50.60, FT E-value 3.4e-11" FT CDS 29580..30212 FT /transl_table=11 FT /gene="pduL" FT /gene_synonym="STY2252" FT /product="conserved hypothetical protein" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduL pduL TR:Q9XDN5 (EMBL:AF026270) (210 aa) fasta FT scores: E(): 0, 97.1% id in 210 aa and Thermotoga maritima FT hypothetical protein TM0375 TR:Q9WYK8 (EMBL:AE001717) (210 FT aa) fasta scores: E(): 0, 55.3% id in 188 aa" FT /db_xref="InterPro:IPR008300" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L6" FT /protein_id="CAD02408.1" FT /translation="MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGH FT PISEKKALLQPGQYATEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGIAAP FT LRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVAIEG FT DERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR" FT CDS 30209..30700 FT /transl_table=11 FT /gene="pduM" FT /gene_synonym="STY2253" FT /product="conserved hypothetical protein" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduM pduM TR:Q9XDN4 (EMBL:AF026270) (163 aa) fasta FT scores: E(): 0, 96.3% id in 163 aa" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L5" FT /protein_id="CAD02409.1" FT /translation="MNGETLQRIVEEIVSRLQRRALSTATLSVAQLRDADCPALFCQHA FT SLRILLVDLPLLGQLADAETDDAAARKIHDALAFGIRVQLSLHSQLLPVIPVKKLARLP FT LVFTDEHGLPLVLHAGSVLGYRDVALLSRGRVVVHRKCIVTAMARDAANARNIQLIKQE FT " FT CDS 30704..30978 FT /pseudo FT /transl_table=11 FT /gene="pduN" FT /gene_synonym="STY2254" FT /product="putative propanediol utilization protein PduN FT (pseudogene)" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduN pduN TR:Q9XDN3 (EMBL:AF026270) (91 aa) fasta FT scores: E(): 8.6e-23, 100.0% id in 64 aa and Salmonella FT typhimurium ethanolamine utilization protein EutN eutN or FT cchB SW:EUTN_SALTY (P41792) (99 aa) fasta scores: E(): FT 5.3e-05, 45.9% id in 61 aa. The Salmonella enterica FT homologue has been implicated in polyhedral body formation FT which may protect the cell from toxic metabolites, or FT protect the dehydratase from oxygen. Contains a frameshift FT after codon 22. The sequence has been checked and is FT believed to be correct" FT CDS 30988..31998 FT /transl_table=11 FT /gene="pduO" FT /gene_synonym="STY2255" FT /product="conserved hypothetical protein" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduO pduO TR:Q9XDN2 (EMBL:AF026270) (337 aa) fasta FT scores: E(): 0, 92.6% id in 337 aa. N-terminal half is FT similar to many e.g. Clostridium pasteurianum hypothetical FT protein TR:O30452 (EMBL:AF006034) (173 aa) fasta scores: FT E(): 2.3e-21, 43.7% id in 167 aa and Citrobacter freundii FT hypothetical protein SW:YDHW_CITFR (P45515) (176 aa) fasta FT scores: E(): 3.2e-25, 47.9% id in 167 aa. C-terminal half FT is similar to many e.g. Clostridium pasteurianum FT hypothetical protein TR:O30453 (EMBL:AF006034) (143 aa) FT fasta scores: E(): 5.4e-17, 41.2% id in 131 aa and FT Citrobacter freundii hypothetical protein SW:YDHY_CITFR FT (P45517) (142 aa) fasta scores: E(): 3.3e-16, 39.7% id in FT 136 aa. These ORFs are found within 1,3-propanediol FT catabolic operons of Clostridium pasteurianum and FT Citrobacter freundii" FT /db_xref="GOA:Q8Z5L4" FT /db_xref="InterPro:IPR017858" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L4" FT /protein_id="CAD02411.1" FT /translation="MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCA FT CAAADENHRTLLEAIQQQLFWFSAELASDSEQPSPKQRYISSEEISALEAAIDRAMARV FT EPLHSFILPGRCEAASRLHFARTLARRAERRLVELATEVNVRQVLMRYINRLSDCLYAL FT ARAEDSDAHQANIIREVSKRYLAASQPTRSKETTPVALSFHDLHQLTRAAVERAQQLQV FT PVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELSDVVQPGAALYG FT LESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ" FT misc_feature 30994..31494 FT /note="Pfam match to entry PF01923 DUF80, Protein of FT unknown function DUF80, score 229.20, E-value 6.1e-65" FT CDS 31995..33389 FT /transl_table=11 FT /gene="pduP" FT /gene_synonym="STY2256" FT /product="putative CoA-dependent proprionaldehyde FT dehydrogenase" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduP pduP TR:Q9XDN1 (EMBL:AF026270) (464 aa) fasta FT scores: E(): 0, 99.1% id in 464 aa and Salmonella FT typhimurium ethanolamine utilization protein EutE eutE FT SW:EUTE_SALTY (P41793) (467 aa) fasta scores: E(): 0, 45.7% FT id in 473 aa" FT /note="Paralogue of E. coli eutE (EUTE_ECOLI); Fasta hit to FT EUTE_ECOLI (467 aa), 45% identity in 470 aa overlap" FT /db_xref="GOA:Q8Z5L3" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L3" FT /protein_id="CAD02412.1" FT /translation="MNTSELETLIRTILSEQLTTPAQTPAQPQGKGIFQSVSEAIDAAH FT QAFLRYQQCPLKTRSAIISAMRQELTPLLAALAEESANETGMGNKEDKFLKNKAALDNT FT PGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSIYFSP FT HPGAKKVSLKLISLIEEIAFRCCGIRNLVVTVAEPTFEATQQMMAHPRIAVLAITGGPG FT IVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVE FT SVAERLVQQMQTFGALLLSPADTDKLRAVCLPEGQANKKLVGKSPSAMLEAAGIAVPAK FT APRLLIALVNADDPWVTREQLMPMLPVVKVNDFDSALALALKVEEGLHHTAIMHSQNVS FT RLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLT FT NGFSIR" FT misc_feature 32028..33323 FT /note="Pfam match to entry PF00171 aldedh, Aldehyde FT dehydrogenase family, score -146.80, E-value 5.8e-08" FT RBS 33392..33396 FT /note="possible RBS" FT CDS 33401..34513 FT /transl_table=11 FT /gene="pduQ" FT /gene_synonym="STY2257" FT /product="putative propanol dehydrogenase" FT /EC_number="1.1.1.-" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduQ pduQ TR:Q9XDN0 (EMBL:AF026270) (370 aa) fasta FT scores: E(): 0, 97.8% id in 370 aa and Clostridium FT acetobutylicum NADPH-dependent butanol dehydrogenase adh1 FT SW:ADH1_CLOAB (P13604) (388 aa) fasta scores: E(): 7e-32, FT 35.6% id in 385 aa" FT /note="Fasta hit to EUTG_ECOLI (395 aa), 38% identity in FT 380 aa overlap" FT /note="Fasta hit to FUCO_ECOLI (383 aa), 32% identity in FT 383 aa overlap" FT /note="Paralogue of E. coli yiaY (ADH2_ECOLI); Fasta hit to FT ADH2_ECOLI (383 aa), 37% identity in 346 aa overlap" FT /db_xref="GOA:Q8Z5L2" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L2" FT /protein_id="CAD02413.1" FT /translation="MNTFSLQTRLYSGQGSLAVLKRFTNKHIWIICDGFLARSPLLDTL FT CNALPADNRISVFSEITPDPTIHTVVQGIAQMQALQPQVVIGFGGGSAMDAAKAIVWFS FT QQSGINIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPELVVS FT VPPQITANTGMDVLTHALEAWVSPHASDFTDALAEKAAKLVFQYLPTAVEKGDCVATRG FT KMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTTVIRFNAGVPRAAK FT RYARLAKACGFCPAEANDVTAINALIQQIELLKQRCALPSLAVALKEGRSDFSARIPAM FT VQAALADVTLRTNPRPASAEEIRELLEELL" FT misc_feature 33569..34486 FT /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing FT alcohol dehydrogenases, score 329.20, E-value 4.6e-95" FT misc_feature 33860..33946 FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1" FT RBS 34498..34502 FT /note="possible RBS" FT CDS 34537..35865 FT /transl_table=11 FT /gene="pduS" FT /gene_synonym="STY2258" FT /product="putative ferredoxin" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduS pduS TR:Q9XDM9 (EMBL:AF026270) (451 aa) fasta FT scores: E(): 0, 97.7% id in 442 aa and Clostridium FT sticklandii electron transfer protein from the D-proline FT reductase cluster prdC TR:Q9L4Q5 (EMBL:AJ130879) (402 aa) FT fasta scores: E(): 1.5e-24, 32.3% id in 337 aa. The FT N-terminus is truncated by 9 amino acids with respect to FT the Salmonella enterica homologue (by a stop codon). The FT putative start codon indicated here is at codon 10 of the FT Salmonella enterica homologue" FT /db_xref="GOA:Q8Z5L1" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L1" FT /protein_id="CAD02414.1" FT /translation="MSLSADEIRERVRAAGVVGAGGAGFPAHVKLQAQVEIFLVNAAEC FT EPMLKVDQQLMWQQAARLVRGVQYAMTATGAREGVIALKEKYRRAIDALSPLLPAGIRL FT HILPDVYPAGDEVLTIWMATGRRVAPAALPASVGVVVNNVQTVLNIARAVEQQFPVTRR FT TLTVNGAVARPLTVTVPVGMSLHEVLALAGGATVDNPGFINGGPMMGGLITSLDNPVTK FT TTGGLLVLPKSHPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHELSPHLLVR FT AVNFHQAATPQLLLSALTCSECNVCESVACPVGISPMRINRMLKRELRAQNQRYEGPLN FT PADEMAKYRLVPVKRLIAKLGLSPWYQEAPLVEEEPSVEKVTLQLRQHIGASAVPTVAV FT GERVTRGQCVADVPPGALGASIHASIDGIVSAISEQAITVVRG" FT misc_feature 35278..35349 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 9.80, E-value 0.08" FT misc_feature 35299..35334 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT RBS 35856..35862 FT /note="possible RBS" FT CDS 35868..36422 FT /transl_table=11 FT /gene="pduT" FT /gene_synonym="STY2259" FT /product="putative propanediol utilization protein PduT" FT /note="Similar to Salmonella enterica serovar Typhimurium FT protein PduT pduT TR:Q9XDM8 (EMBL:AF026270) (184 aa) fasta FT scores: E(): 0, 98.9% id in 184 aa and to part of FT Salmonella typhimurium ethanolamine utilization protein FT EutM precursor eutM or cchA SW:EUTM_SALTY (P41791) (96 aa) FT fasta scores: E(): 0.00067, 40.0% id in 80 aa. The FT Salmonella enterica homologue has been implicated in FT polyhedral body formation which may protect the cell from FT toxic metabolites, or protect the dehydratase from oxygen" FT /db_xref="InterPro:IPR011238" FT /db_xref="UniProtKB/TrEMBL:Q8Z5L0" FT /protein_id="CAD02415.1" FT /translation="MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPSKFLLM FT LGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWS FT VAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGL FT LVYRSVIPRSHEAMWRQMVEG" FT RBS 36413..36417 FT /note="possible RBS" FT CDS 36422..36772 FT /transl_table=11 FT /gene="STY2260" FT /product="putative propanediol utilization protein PduU" FT /note="Identical to Salmonella typhimurium propanediol FT utilization protein pduU SW:PDUU_SALTY (Q9XDM7) (116 aa) FT fasta scores: E(): 0, 100.0% id in 116 aa and Salmonella FT typhimurium ethanolamine utilization protein eutS FT SW:EUTS_SALTY (P76557) (111 aa) fasta scores: E(): 3.4e-22, FT 57.8% id in 109 aa. The Salmonella enterica homologue has FT been implicated in polyhedral body formation which may FT protect the cell from toxic metabolites, or protect the FT dehydratase from oxygen" FT /db_xref="GOA:P0A1D2" FT /db_xref="InterPro:IPR009307" FT /db_xref="UniProtKB/Swiss-Prot:P0A1D2" FT /protein_id="CAD02416.1" FT /translation="MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSA FT IGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGE FT MMQFTTCSITRT" FT CDS 36777..37229 FT /transl_table=11 FT /gene="pduV" FT /gene_synonym="STY2261" FT /product="putative propanediol utilization protein PduV" FT /note="Similar to Salmonella typhimurium propanediol FT utilization protein pduV SW:PDUV_SALTY (Q9XDM6) (150 aa) FT fasta scores: E(): 0, 97.3% id in 150 aa and Salmonella FT typhimurium ethanolamine utilization protein eutP FT SW:EUTP_SALTY (Q9ZFV6) (159 aa) fasta scores: E(): 2.7e-08, FT 32.2% id in 143 aa." FT /db_xref="GOA:Q8Z5K9" FT /db_xref="InterPro:IPR019611" FT /db_xref="UniProtKB/TrEMBL:Q8Z5K9" FT /protein_id="CAD02417.1" FT /translation="MKRLMFIGPSQCGKTSLTQSLRGEALHYKKTQAIEWSPMAIDTPG FT EYLENRCLYSALLTSACEADVIALVLNADAQWSPFSPGFTVPMNRPTIGLVTKADLADP FT QRISLVAQWLTQAGARQIFITSALNNSGLDAVLDFLNSKEPLCLTK" FT misc_feature 36798..36821 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS 37203..37207 FT /note="possible RBS" FT CDS 37214..38428 FT /transl_table=11 FT /gene="STY2262" FT /product="putative propionate kinase" FT /EC_number="2.7.2.-" FT /note="Similar to Salmonella typhimurium probable FT propionate kinase SW:PDUW_SALTY (P74879; Q9XDM5) (404 aa) FT fasta scores: E(): 0, 99.3% id in 404 aa" FT /note="Fasta hit to ACKA_ECOLI (400 aa), 44% identity in FT 396 aa overlap" FT /note="Paralogue of E. coli yhaA (TDCD_ECOLI); Fasta hit to FT TDCD_ECOLI (402 aa), 44% identity in 400 aa overlap" FT /db_xref="GOA:Q8Z5K8" FT /db_xref="HSSP:1G99" FT /db_xref="InterPro:IPR004372" FT /db_xref="UniProtKB/TrEMBL:Q8Z5K8" FT /protein_id="CAD02418.1" FT /translation="MSYKIMAINAGSSSLKFQLLEMPQGDMLCQGLIERIGMADAQVTI FT KTHSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDSTLV FT TDETLAQIERLAELAPLHNPVNALGIHVFRQLLPDAPSVAVFDTAFHQTLDEPAYIYPL FT PWHYYAELGIRRYGFHGTSHKYVSGVLAEKLGVPLSALRVICCHLGNGSSVCAIKNGRS FT VNTSMGFTPQSGVMMGTRSGDIDPSILPWIAQRECKTPQQLNQLLNNESGLLGVSGVSS FT DYRDVEQAANTGNRQAKLALTLFAERIRATIGGYIMQMGGLDALVFTGGIGENSARARS FT AVCHNLQFLGLAVDEEKNQRNATFIQTENALVKVAVINTNEELMIAQDVMRIALPATEG FT LCVPA" FT misc_feature 37226..37261 FT /note="PS01075 Acetate and butyrate kinases family FT signature 1" FT misc_feature 37229..38374 FT /note="Pfam match to entry PF00871 Acetate_kinase, FT Acetokinase family, score 637.80, E-value 6.1e-188" FT misc_feature 37820..37873 FT /note="PS01076 Acetate and butyrate kinases family FT signature 2" FT CDS 38486..39388 FT /transl_table=11 FT /gene="pduX" FT /gene_synonym="STY2263" FT /product="conserved hypothetical protein" FT /note="Similar to Salmonella enterica serovar Typhimurium FT PduX TR:Q9XDM4 (EMBL:AF026270) (300 aa) fasta scores: E(): FT 0, 99.3% id in 300 aa" FT /db_xref="GOA:Q8Z5K7" FT /db_xref="InterPro:IPR012363" FT /db_xref="UniProtKB/TrEMBL:Q8Z5K7" FT /protein_id="CAD02419.1" FT /translation="MRAHYSYLKGDNVAVAQCPASCGELIQGWILGSEKLVSCPVDWYS FT TVAVTAAPPLVNERPLSRAMVERVLAHWQYPAHWSNEIRVDVRSSIPVAKGMASSTADI FT AATAVATAHHLGHSLDETTLAQLCVSIEPTDSTVFHQLTLFDHNNAATQIACEPPPPID FT LLVLESPVTLRTQDYHRLPRQQKLIASSPTLQQAWNLVQEACITQNPLRLGEAATLSAI FT ASQTLLPKPGFTALLSLVEECDLYGLNVAHSGSVVGLMLDRKRHDIARLKGKLAEKKLT FT RHWPKQHLLKMVTGGVKLQ" FT CDS complement(39422..39757) FT /transl_table=11 FT /gene="STY2264" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli YEEX_ECOLI; Fasta hit to FT YEEX_ECOLI (109 aa), 94% identity in 109 aa overlap" FT /db_xref="InterPro:IPR007458" FT /db_xref="UniProtKB/Swiss-Prot:P67606" FT /protein_id="CAD02420.1" FT /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDIEKKIRDNQKRVLLL FT DNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGEMK FT HADVKAE" FT CDS complement(40002..41060) FT /transl_table=11 FT /gene="STY2265" FT /gene_synonym="yeeA" FT /product="putative membrane protein" FT /note="Similar to Neisseria meningitidis putative integral FT membrane protein NMA0079 TR:Q9JX36 (EMBL:AL162752) (375 aa) FT fasta scores: E(): 4.7e-20, 27.3% id in 352 aa and FT Neisseria meningitidis hypothetical protein NMB0188 FT TR:Q9K1G5 (EMBL:AE002376) (375 aa) fasta scores: E(): FT 6.3e-20, 27.0% id in 352 aa. N-terminal half contains FT hydrophobic, possible membrane-spanning regions" FT /note="Orthologue of E. coli yeeA (YEEA_ECOLI); Fasta hit FT to YEEA_ECOLI (352 aa), 78% identity in 352 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8Z5K6" FT /protein_id="CAD02421.1" FT /translation="MRADKSLSPFEIRLYRHYRIVHGIRIALAFILTFLLVRLFSIPEG FT TWPLITLVVIMGPISFWGNVVPRAFERIGGTILGAALGLVALRLELFSLPLMLVWCAIA FT MFLCGWLALGKKPYQALLIGITLAVVVGAPAGDMNTALWRGGDVILGALLAMLFTGIWP FT QRAFLHWRIQLAHCVTAYNRVYQAALSPNLLERPRLDKYLQRLLNDVVKMRGLITPASK FT ETRIQKSIFEAIQTINRNLVCMLELQINAHWATRASHFVMLNTHTLRETQQMTQQTLLT FT IAHALFEGNPQPVLANTGKLNDIAAELRQLMNEQQGDAVAETPIHGYVWLSMETARQLE FT LLSHLICRALRK" FT RBS complement(41068..41074) FT /note="possible RBS" FT CDS complement(41179..41646) FT /transl_table=11 FT /gene="STY2266" FT /gene_synonym="sbmC" FT /gene_synonym="gyrI" FT /product="putative DNA gyrase inhibitory protein" FT /note="Orthologue of E. coli sbmC (GYRI_ECOLI); Fasta hit FT to GYRI_ECOLI (157 aa), 71% identity in 155 aa overlap" FT /db_xref="GOA:P0A213" FT /db_xref="HSSP:1JYH" FT /db_xref="InterPro:IPR010499" FT /db_xref="UniProtKB/Swiss-Prot:P0A213" FT /protein_id="CAD02422.1" FT /translation="MDYEIRQEQKRKIAGFHMVGPWEHTVKQGFEQLMTWVDRQRIVPV FT EWIAVYYDNPDVVPAEKLRCDTVVSVAENFILPDNSEGVIVTAIEGGEYATAVARVEDR FT DFAKPWERFFDVLEQDSAYQIASAPCFETYLNNGMEDGYWDIEMYIPVQRK" FT RBS complement(41651..41655) FT /note="possible RBS" FT CDS complement(41797..42969) FT /pseudo FT /transl_table=11 FT /gene="STY2268" FT /gene_synonym="yeeC" FT /gene_synonym="dacD" FT /product="penicillin-binding protein (pseudogene)" FT /EC_number="3.4.16.4" FT /note="Orthologue of E. coli yeeC (DACD_ECOLI); Fasta hit FT to DACD_ECOLI (388 aa), 88% identity in 315 aa overlap. FT Contains stop codon at codon 318. The sequence has been FT checked and is believed to be correct" FT misc_feature complement(42112..42894) FT /note="Pfam match to entry PF00768 Peptidase_S11, FT D-alanyl-D-alanine carboxypeptidase, score 506.50, E-value FT 2e-148" FT CDS complement(43093..43857) FT /transl_table=11 FT /gene="phsC" FT /gene_synonym="STY2269" FT /product="thiosulfate reductase cytochrome b subunit" FT /note="Similar to Salmonella typhimurium thiosulfate FT reductase cytochrome b subunit phsC SW:PHSC_SALTY (P37602; FT P37603; Q56120) (254 aa) fasta scores: E(): 0, 99.6% id in FT 254 aa" FT /note="Orthologue of E. coli PHSC_ECOLI; Fasta hit to FT PHSC_ECOLI (261 aa), 57% identity in 242 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z5K5" FT /db_xref="InterPro:IPR011577" FT /db_xref="UniProtKB/TrEMBL:Q8Z5K5" FT /protein_id="CAD02424.1" FT /translation="MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRMLA FT PKTAGGEEHRDYLYSLAIRRWHWGNALLFVLLLLSGLFGHFSLGPVALMVQVHTWCGFA FT LLAFWVGFVLINLTTGNGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQNKF FT NPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYL FT CTLGDTPGQIFRSMVDGYHRHRTAPRGDKSAV" FT CDS complement(43854..44432) FT /transl_table=11 FT /gene="phsB" FT /gene_synonym="STY2270" FT /product="thiosulfate reductase electron transport protein FT PhsB" FT /note="Identical to Salmonella typhimurium thiosulfate FT reductase electron transport protein PhsB phsB FT SW:PHSB_SALTY (P37601) (192 aa) fasta scores: E(): 0, FT 100.0% id in 192 aa" FT /note="Fasta hit to HYFA_ECOLI (205 aa), 32% identity in FT 188 aa overlap" FT /note="Fasta hit to YGFS_ECOLI (162 aa), 36% identity in FT 160 aa overlap" FT /note="Fasta hit to HYDN_ECOLI (175 aa), 32% identity in FT 175 aa overlap" FT /note="Fasta hit to YSAA_ECOLI (157 aa), 36% identity in FT 166 aa overlap" FT /note="Paralogue of E. coli nrfC (NRFC_ECOLI); Fasta hit to FT NRFC_ECOLI (223 aa), 52% identity in 186 aa overlap" FT /db_xref="GOA:P0A1I2" FT /db_xref="HSSP:1KQF" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/Swiss-Prot:P0A1I2" FT /protein_id="CAD02425.1" FT /translation="MNHLTNQYVMLHDEKRCIGCQACTVACKVLNDVPEGFSRVQVQIR FT APEQASNALTHFQFVRVSCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVA FT ACPFHVRYLNPQTGVADKCNFCADTRLAAGQSPACVSVCPTDALKFGRLDESEIQRWVG FT QKEVYRQQEARSGAVSLYRRKEVHQEGKA" FT RBS complement(43865..43870) FT /note="possible RBS" FT misc_feature complement(44097..44168) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 33.70, E-value 4.1e-06" FT misc_feature complement(44112..44147) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT misc_feature complement(44334..44405) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 12.40, E-value 0.031" FT RBS complement(44438..44443) FT /note="possible RBS" FT CDS complement(44447..46723) FT /transl_table=11 FT /gene="phsA" FT /gene_synonym="STY2271" FT /product="thiosulfate reductase precursor" FT /EC_number="1.-.-.-" FT /note="Similar to Salmonella typhimurium thiosulfate FT reductase precursor phsA SW:PHSA_SALTY (P37600) (758 aa) FT fasta scores: E(): 0, 99.6% id in 758 aa. Contains a FT probable N-terminal signal sequence" FT /db_xref="GOA:Q8Z5K4" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q8Z5K4" FT /protein_id="CAD02426.1" FT /translation="MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTP FT SLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGTRICARGGSGVSLVNDPQRIVKPMK FT RTGPRGDGEWQVISWQQAYQEIAAKMNAIKAQHGPESVAFSSKSGSLSSHLFHLATAFG FT SPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTA FT QEKGAKMVSFDPRLSIFSSKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTS FT GFEQLAQAVKETTSEWAAAQADVPADVIVRVTRELAACAPHAIVSPGHRATFSQEEIDM FT RRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDL FT VAPQFKYIAAGGGVVQSIIDAALTQKPYPIKAWIMSRHNPFQTVTCRSDLVKTVEQLDL FT VVSCDVYLSESAAYADYLLPECTYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQ FT IWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGYLEWGVPLLLREPESVR FT QFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVPRVRDFALKKEN FT ELYFIQGKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKE FT KGKALVTPGIRPDTLFVYMGFGAKAGAKTAATTHGIHSGNLLPHVTSPVSGTVVHTAGV FT TLSRA" FT misc_feature complement(44498..44815) FT /note="Pfam match to entry PF01568 Molydop_binding, FT Molydopterin dinucleotide binding domain, score 100.50, FT E-value 3.3e-26" FT misc_feature complement(44621..44704) FT /note="PS00932 Prokaryotic molybdopterin oxidoreductases FT signature 3" FT misc_feature complement(45155..45352) FT /note="Pfam match to entry PF00384 molybdopterin, FT Prokaryotic molybdopterin oxidoreductases, score 118.90, FT E-value 6.4e-38" FT misc_feature complement(45272..45325) FT /note="PS00490 Prokaryotic molybdopterin oxidoreductases FT signature 2" FT misc_feature complement(46532..46588) FT /note="PS00551 Prokaryotic molybdopterin oxidoreductases FT signature 1" FT RBS complement(46729..46733) FT /note="possible RBS" FT CDS 47342..49684 FT /pseudo FT /transl_table=11 FT /gene="sopA" FT /gene_synonym="STY2275" FT /product="secreted protein (pseudogene)" FT /note="Similar to Salmonella dublin secreted effector FT protein sopA TR:Q9S4P4 (EMBL:AF121227) (782 aa) fasta FT scores: E(): 0, 95.0% id in 319 aa. Contains multiple FT frameshifts" FT CDS 50051..51481 FT /transl_table=11 FT /gene="STY2276" FT /gene_synonym="sbcB" FT /product="exodeoxyribonuclease I" FT /EC_number="3.1.11.1" FT /note="Orthologue of E. coli sbcB (EX1_ECOLI); Fasta hit to FT EX1_ECOLI (475 aa), 93% identity in 468 aa overlap" FT /db_xref="GOA:Q8Z5K3" FT /db_xref="HSSP:1FXX" FT /db_xref="InterPro:IPR013620" FT /db_xref="UniProtKB/TrEMBL:Q8Z5K3" FT /protein_id="CAD02428.1" FT /translation="MTVKNDSIQSTFLFHDYETFGTHPALDRPAQFAALRTDNDFNVIG FT EPEVFYCKPADDYLPQPGAVLITGITPQEAREKGENEAAFARRIHALFTVPKTCVVGYN FT NVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLP FT SFRLEHLTQANGIEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALI FT DVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLR FT ERLYTAKADLGDHAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRE FT NPQVRDKVVAIFAEAEPFATSDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITF FT VDKRIEKLLFNYRARNFPGTLDDAEQQRWLEHRRQVLTPEFLQQYANELQMLSQQYAED FT KTKLGLLKSLWQYATEIV" FT CDS complement(51617..52981) FT /transl_table=11 FT /gene="STY2277" FT /gene_synonym="yeeF" FT /product="putative amino acid transporter protein" FT /note="Fasta hit to YCJJ_ECOLI (461 aa), 64% identity in FT 446 aa overlap" FT /note="Orthologue of E. coli yeeF (YEEF_ECOLI); Fasta hit FT to YEEF_ECOLI (454 aa), 99% identity in 452 aa overlap" FT /db_xref="GOA:Q8XFJ1" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:Q8XFJ1" FT /protein_id="CAD02429.1" FT /translation="MTMSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIV FT SGLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS FT LLDYLFAPMINILLAKIYFEALVPSIPSWVFVVALVAFMTAFNLRSLKSVANFNTVIVV FT LQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFDGI FT SNLSEETKDAERVIPRAIFLTALIGGLIFIFATYFLQLYFPDISRFKDPDASQPEIMLY FT VAGKTFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWRTPAM FT NIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFQY FT LFLPMCGALTVGALWVNLEESSMVLGLIWAGIGLIYLACVTKSFRNPVPQYEDVA" FT misc_feature complement(51662..52936) FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score -136.20, E-value 1.4e-07" FT RBS complement(52983..52988) FT /note="possible RBS" FT CDS complement(53261..54175) FT /transl_table=11 FT /gene="STY2278" FT /product="putative transcriptional regulator" FT /note="Fasta hit to YHAJ_ECOLI (298 aa), 36% identity in FT 287 aa overlap" FT /note="Orthologue of E. coli YEEY_ECOLI; Fasta hit to FT YEEY_ECOLI (316 aa), 87% identity in 302 aa overlap" FT /db_xref="GOA:Q8XET1" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q8XET1" FT /protein_id="CAD02430.1" FT /translation="MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLENDL FT NIQLLDRSGHRARFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFP FT FSLLAPLIDAFYQRHSVTRLKFVNGVLGGSWETLTQGRADIIVGAMRAPPPDTGFGFAR FT LGDLELVFAVAPHHPLVHEEEPLSRQTIKRFRAIVVGDSVHSSRSIGSELLDAQEAITV FT FDFKTKLELQISGLGCGYLPRYLAQRFLESGALIEKKVVAQIVYEPVWVGWNEQTAGLA FT SGWWRDEILANNAIAGVYAKSPV" FT misc_feature complement(53735..54163) FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 118.80, E-value 1e-31" FT CDS complement(54221..55045) FT /transl_table=11 FT /gene="STY2279" FT /product="conserved hypothetical protein" FT /note="Similar to e.g Deinococcus radiodurans conserved FT hypothetical protein DR0832 TR:Q9RW37 (EMBL:AE001937) (290 FT aa) fasta scores: E(): 3.1e-32, 40.8% id in 272 aa, FT Neisseria meningitidis hypothetical protein NMA1019 FT TR:Q9JV30 (EMBL:AL162754) (258 aa) fasta scores: E(): FT 3.6e-16, 31.0% id in 261 aa and to Neisseria meningitidis FT hypothetical protein NMB0809 TR:Q9K018 (EMBL:AE002434) FT (265 aa) fasta scores: E(): 4e-15, 31.2% id in 263 aa" FT /note="Orthologue of E. coli YEEZ_ECOLI; Fasta hit to FT YEEZ_ECOLI (274 aa), 89% identity in 274 aa overlap" FT /db_xref="GOA:Q8XH10" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8XH10" FT /protein_id="CAD02431.1" FT /translation="MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSGI FT ESYPLRLEPELVCEADDLDALLDVDALVITLPARRSGPGEDFYLQAMQELVDSALAYRI FT PRIIFTSSTSVYGDAQGVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLAGLV FT GPGRHPGRFFAGKTAPDGQHGVNLVHLEDVVGAITLLLQAPKGGHIYNICAPAHPARNV FT FYPQMTRLLGMAPPHFRDAPDNGKGKIIDGSRICNELGFEYQYPDPLVMPME" FT misc_feature complement(54515..54538) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS complement(55053..55057) FT /note="possible RBS" FT CDS 55208..55249 FT /transl_table=11 FT /gene="hisL" FT /gene_synonym="STY2279A" FT /product="his operon leader peptide" FT /note="Similar to Escherichia coli, and Salmonella FT typhimurium his operon leader peptide hisL SW:LPHI_ECOLI FT (P03058) (16 aa) fasta scores: E(): 0.00021, 81.3% id in 16 FT aa, and to Klebsiella pneumoniae hiso leader peptide FT TR:Q48439 (EMBL:K01997) (16 aa) fasta scores: E(): 0.0079, FT 68.8% id in 16 aa" FT /db_xref="GOA:Q8Z5K2" FT /db_xref="InterPro:IPR012565" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5K2" FT /protein_id="CAD02432.1" FT /translation="MTRVQFKHHHHPD" FT RBS 55380..55387 FT /note="possible RBS" FT CDS 55396..56295 FT /transl_table=11 FT /gene="STY2280" FT /gene_synonym="hisG" FT /product="ATP phosphoribosyltransferase" FT /EC_number="2.4.2.17" FT /note="Similar to Salmonella typhimurium ATP FT phosphoribosyltransferase hisG SW:HIS1_SALTY (P00499) (299 FT aa) fasta scores: E(): 0, 99.7% id in 299 aa" FT /note="Orthologue of E. coli hisG (HIS1_ECOLI); Fasta hit FT to HIS1_ECOLI (299 aa), 96% identity in 299 aa overlap" FT /db_xref="GOA:Q8Z5K1" FT /db_xref="HSSP:1NH8" FT /db_xref="InterPro:IPR015867" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5K1" FT /protein_id="CAD02433.1" FT /translation="MLDNTRLRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIAMAEN FT MPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYLTLRRLDFGGC FT RLSLATPVDEAWDGPAALDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPRAGL FT ADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMAQSKQQLIDKLLTRIQGVIQ FT ARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQQRVAMHMVSSETLFWETMEKL FT KALGASSILVLPIEKMME" FT misc_feature 55552..56058 FT /note="Pfam match to entry PF01634 HisG, ATP FT phosphoribosyltransferase, score 286.80, E-value 2.7e-82" FT misc_feature 55861..55926 FT /note="PS01316 ATP phosphoribosyltransferase signature" FT RBS 56386..56389 FT /note="possible RBS" FT CDS 56398..57702 FT /transl_table=11 FT /gene="STY2281" FT /gene_synonym="hisD" FT /product="histidinol dehydrogenase" FT /EC_number="1.1.1.23" FT /note="Similar to Salmonella typhimurium histidinol FT dehydrogenase hisD SW:HISX_SALTY (P10370) (433 aa) fasta FT scores: E(): 0, 99.1% id in 433 aa" FT /note="Orthologue of E. coli hisD (HISX_ECOLI); Fasta hit FT to HISX_ECOLI (433 aa), 92% identity in 433 aa overlap" FT /db_xref="GOA:Q8Z5K0" FT /db_xref="HSSP:1KAE" FT /db_xref="InterPro:IPR012131" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5K0" FT /protein_id="CAD02434.1" FT /translation="MSFNTLIDWNSCSPEQQRALLTRPAISASDSITRTVSDILYNVKT FT RGDDALREYSAKFDKTEVTALRVTPEEIAAAGARLSDELKQAMAAAVKNIETFHSAQTL FT PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCQKVVLCSPP FT PIADEILYAAQLCGVQEIFNVGGAQAIAALAFGSESVPKVDKIFGPGNAFVTEAKRQVS FT QRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPDADIARKV FT AEAVERQLAELPRAGTARQALSASRLIVTKDLAQCVAISNQYGPEHLIIQTRNARDLVD FT AITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKAG FT FSALASTIETLAAAERLTAHKNAVTLRVNALKEQA" FT misc_feature 56446..57681 FT /note="Pfam match to entry PF00815 Histidinol_dh, FT Histidinol dehydrogenase, score 873.00, E-value 9.6e-259" FT misc_feature 57085..57183 FT /note="PS00611 Histidinol dehydrogenase signature" FT RBS 57688..57694 FT /note="possible RBS" FT CDS 57699..58778 FT /transl_table=11 FT /gene="STY2282" FT /gene_synonym="hisC" FT /product="histidinol-phosphate aminotransferase FT (imidazole)" FT /EC_number="2.6.1.9" FT /note="Similar to Salmonella typhimurium FT histidinol-phosphate aminotransferase hisC SW:HIS8_SALTY FT (P10369) (359 aa) fasta scores: E(): 0, 98.6% id in 359 aa" FT /note="Orthologue of E. coli hisC (HIS8_ECOLI); Fasta hit FT to HIS8_ECOLI (356 aa), 89% identity in 355 aa overlap" FT /db_xref="GOA:Q8Z5J9" FT /db_xref="HSSP:1GEX" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5J9" FT /protein_id="CAD02435.1" FT /translation="MSTENTLSVADLARENVRNLVPYQSARRLGGNGDVWLNANEFPTA FT VEFQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELVIRAFCEPGKD FT AILYCPPTYGMYSVSAETIGVERRTVPALENWQLDLQGISDNLDGAKVVFVCSPNNPTG FT QLINPQDLRTLLELTRGKAIVVADEAYIEFCPQATLAGWLVKYPHLVILRTLSKAFALA FT GLRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSPQGINVMRDRVAQTVQERQY FT LVNALQQTACVEHVFDSETNYILARFTASSSVFKSLWDQGIILRDQNKQPSLSGCLRIT FT VGTRQENQRVIDALRAEPV" FT misc_feature 57921..58712 FT /note="Pfam match to entry PF00222 aminotran_2, FT Aminotransferases class-II, score 344.00, E-value 1.7e-99" FT misc_feature 58338..58367 FT /note="PS00599 Aminotransferases class-II FT pyridoxal-phosphate attachment site" FT RBS 58766..58769 FT /note="possible RBS" FT CDS 58775..59842 FT /transl_table=11 FT /gene="STY2283" FT /gene_synonym="hisB" FT /product="imidazoleglycerol-phosphate dehydratase; FT histidinol phosphatase" FT /EC_number="2.6.1.9" FT /note="Similar to Salmonella typhimurium histidine FT biosynthesis bifunctional protein HisB [includes: FT histidinol-phosphatase hisB SW:HIS7_SALTY (P10368) (354 aa) FT fasta scores: E(): 0, 97.5% id in 355 aa" FT /note="Orthologue of E. coli hisB (HIS7_ECOLI); Fasta hit FT to HIS7_ECOLI (355 aa), 96% identity in 355 aa overlap" FT /db_xref="GOA:Q8Z5J8" FT /db_xref="InterPro:IPR013954" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5J8" FT /protein_id="CAD02436.1" FT /translation="MSQKYLFIDRDGTLISEPPSDFQVDHFDKLAFEPEVIPVLLKLQK FT AGFKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVCFDEVLICPHLPADDCDCR FT KPKVKLVERYLAEQAMDSANSYVIGDRATDIQLADNMGITGLRYHRETLNWTMIGEQLT FT KRDRYAHVVRNTKETQIDVSVWLDREGNSKINTGVGFFDHMLDQIATHGGFRMEITVKG FT DLYIDDHHTVEDTGLALGEALKLALGDKRGICRFGFVLPMDECLARCALDISGRPHLEY FT KAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQA FT IRVEGDTLPSSKGVL" FT misc_feature 59360..59788 FT /note="Pfam match to entry PF00475 IGPD, FT Imidazoleglycerol-phosphate dehydratase, score 363.60, FT E-value 4.3e-124" FT misc_feature 59450..59491 FT /note="PS00954 Imidazoleglycerol-phosphate dehydratase FT signature 1" FT misc_feature 59729..59767 FT /note="PS00955 Imidazoleglycerol-phosphate dehydratase FT signature 2" FT RBS 59829..59834 FT /note="possible RBS" FT CDS 59842..60432 FT /transl_table=11 FT /gene="STY2284" FT /gene_synonym="hisH" FT /product="amidotransferase" FT /EC_number="2.4.2.-" FT /note="Similar to Salmonella typhimurium amidotransferase FT HisH hisH SW:HIS5_SALTY (P10376) (194 aa) fasta scores: FT E(): 0, 93.9% id in 196 aa" FT /note="Orthologue of E. coli hisH (HIS5_ECOLI); Fasta hit FT to HIS5_ECOLI (196 aa), 91% identity in 196 aa overlap" FT /db_xref="GOA:P0A1R5" FT /db_xref="HSSP:1OX6" FT /db_xref="InterPro:IPR016226" FT /db_xref="UniProtKB/Swiss-Prot:P0A1R5" FT /protein_id="CAD02437.1" FT /translation="MNVVILDTGCANLSSVKSAVARHGYTPVVSREAEIVLRADKLFLP FT GVGTAQAAMDQLRERELIDLIKACTQPVLGICLGMQLLGRRSEETRGVDLLNIIEQDVP FT KMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPF FT TAAVQKDNFFGVQFHPERSGAAGAQLLKNFLEM" FT misc_feature 59851..60429 FT /note="Pfam match to entry PF00117 GATase, Glutamine FT amidotransferase class-I, score 150.80, E-value 2.5e-41" FT misc_feature 60055..60090 FT /note="PS00442 Glutamine amidotransferases class-I active FT site" FT RBS 60423..60426 FT /note="possible RBS" FT CDS 60432..61169 FT /transl_table=11 FT /gene="STY2285" FT /gene_synonym="hisA" FT /product="phosphoribosylformimino-5-aminoimidazole FT carboxamide ribotide isomerase" FT /EC_number="5.3.1.16" FT /note="Similar to Salmonella typhimurium FT phosphoribosylformimino-5-aminoimidazole carboxamide FT ribotide isomerase hisA SW:HIS4_SALTY (P10372) (246 aa) FT fasta scores: E(): 0, 96.3% id in 246 aa" FT /note="Orthologue of E. coli hisA (HIS4_ECOLI); Fasta hit FT to HIS4_ECOLI (245 aa), 94% identity in 244 aa overlap" FT /db_xref="GOA:Q8Z5J7" FT /db_xref="HSSP:1GEQ" FT /db_xref="InterPro:IPR006062" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5J7" FT /protein_id="CAD02438.1" FT /translation="MIIPALDLIDGTVVRLHQGDYARQRDYGNDPLPRLQDYAAQGAGV FT LHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRTEEDVAALLKAGVARVVIGST FT AVKSPDVVKGWFERFGAQALVLALDVRIDEHGNKQVAVSGWQENSGVSLEQLVETYLPV FT GLKHVLCTDISRDGTLAGSNVSLYEEICARYPQIAFQSSGGIGDIDDIAALRGTGVRGV FT IVGRALLEGKFTVKEAIQCWQNV" FT misc_feature 60435..61157 FT /note="Pfam match to entry PF00977 His_biosynth, Histidine FT biosynthesis protein, score 176.20, E-value 5.3e-49" FT RBS 61136..61143 FT /note="possible RBS" FT CDS 61151..61927 FT /transl_table=11 FT /gene="STY2286" FT /gene_synonym="hisF" FT /product="cyclase HisF" FT /note="Identical to Salmonella typhimurium HisF protein FT hisF SW:HIS6_SALTY (P10374) (258 aa) fasta scores: E(): 0, FT 100.0% id in 258 aa" FT /note="Orthologue of E. coli hisF (HIS6_ECOLI); Fasta hit FT to HIS6_ECOLI (258 aa), 95% identity in 258 aa overlap" FT /db_xref="GOA:P0A1R3" FT /db_xref="HSSP:1GPW" FT /db_xref="InterPro:IPR004651" FT /db_xref="UniProtKB/Swiss-Prot:P0A1R3" FT /protein_id="CAD02439.1" FT /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYADEGAD FT ELVFYDITASSDGRVVDKSWVARVAEVIDIPFCVAGGIRSIDDAAKILSFGADKISINS FT PALADPTLITRLADRFGVQCIVVGIDTWFDDATGKYHVNQYTGDENRTRVTQWETLDWV FT QEVQQRGAGEIVLNMMNQDGVRNGYDLTQLKKVRDVCRVPLIASGGAGTMEHFLEAFRD FT ADVDGALAASVFHKQIINIGELKAYLAGQGVEIRIC" FT misc_feature 61160..61894 FT /note="Pfam match to entry PF00977 His_biosynth, Histidine FT biosynthesis protein, score 503.10, E-value 2.1e-147" FT RBS 61909..61912 FT /note="possible RBS" FT CDS 61921..62532 FT /transl_table=11 FT /gene="STY2287" FT /gene_synonym="hisI" FT /gene_synonym="hisIE" FT /product="phosphoribosyl-AMP cyclohydrolase / FT phosphoribosyl-ATP pyrophosphohydrolase" FT /EC_number="3.5.4.19" FT /EC_number="3.6.1.31" FT /note="Similar to Salmonella typhimurium histidine FT biosynthesis bifunctional protein HisI [includes: FT phosphoribosyl-AMP cyclohydrolase hisI SW:HIS2_SALTY FT (P10367) (203 aa) fasta scores: E(): 0, 97.5% id in 203 aa" FT /note="Orthologue of E. coli hisI (HIS2_ECOLI); Fasta hit FT to HIS2_ECOLI (203 aa), 91% identity in 203 aa overlap" FT /db_xref="GOA:Q8Z5J6" FT /db_xref="InterPro:IPR008179" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5J6" FT /protein_id="CAD02440.1" FT /translation="MLTEQQRRELDWEKTDGLMPAIVQHAVSGEVLTLGYMNPQALDKT FT IESGHVTFFSRTKQRLWTKGETSGHVLNVVSIAPDCDNDTLLVLANPVGPTCHKGTSSC FT FGDASHQWLFLYQLEQLLAERKTADPASSYTAKLYASGTKRIAQKVGEEGVETALAATV FT NDRFELTNEASDLMYHLLVLLQDQDLNLTTVIDDLRKRHQ" FT misc_feature 62017..62250 FT /note="Pfam match to entry PF01502 PRA-CH, FT Phosphoribosyl-AMP cyclohydrolase, score 163.10, E-value FT 4.6e-45" FT misc_feature 62263..62529 FT /note="Pfam match to entry PF01503 PRA-PH, FT Phosphoribosyl-ATP pyrophosphohydrolase, score 165.10, FT E-value 1.2e-45" FT CDS complement(62613..63596) FT /transl_table=11 FT /gene="cld" FT /gene_synonym="STY2288" FT /product="polysaccharide chain length regulator" FT /note="Similar to Salmonella typhimurium chain length FT determinant protein wzzB or cld or rol SW:WZZB_SALTY FT (Q04866) (327 aa) fasta scores: E(): 0, 99.1% id in 327 aa. FT Contains hydrophobic, probable membrane-spanning regions" FT /note="Orthologue of E. coli WZB1_ECOLI; Fasta hit to FT WZB1_ECOLI (326 aa), 72% identity in 326 aa overlap" FT /db_xref="GOA:Q8Z5J5" FT /db_xref="InterPro:IPR003856" FT /db_xref="UniProtKB/TrEMBL:Q8Z5J5" FT /protein_id="CAD02441.1" FT /translation="MTVDSNASSGRGNDPEQIDLIELLLQLWRGKMTIIVAVIIAILLA FT VGYLMIAKEKWTSTAIITQPDAAQVATYTNALNVLYGGNAPKISEVQANFISRFSSAFS FT ALSEALDNQKEREKLTIEQSVKGQTLPLSVSYVSTTAEGAQRRLAEYIQQVDEEVAKEL FT EVDLKDNITLQTKTLQESLETQEVVAQEQKDLRIKQIEEALRYADEAKITQPQIQQTQD FT VTQDTMFLLGSDALKSMIQNEATRPLVFSPAYYQTKQTLLDIKNLKVTADTVHVYRYVM FT KPTLPVRRDSPKTAITLVLAVLLGGMIGAGIVLGRNALRSYKPKAL" FT CDS complement(63739..64905) FT /transl_table=11 FT /gene="ugd" FT /gene_synonym="udg" FT /gene_synonym="STY2289" FT /product="UDP-glucose 6-dehydrogenase" FT /EC_number="1.1.1.22" FT /note="Identical to Salmonella typhimurium UDP-glucose FT 6-dehydrogenase Ugd or Udg SW:UDG_SALTY (Q04873) (388 aa) FT fasta scores: E(): 0, 98.5% id in 388 aa" FT /note="Orthologue of E. coli UDG_ECOLI; Fasta hit to FT UDG_ECOLI (388 aa), 88% identity in 388 aa overlap" FT /db_xref="GOA:Q8Z5J4" FT /db_xref="HSSP:1DLI" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z5J4" FT /protein_id="CAD02442.1" FT /translation="MKITISGTGYVGLSNGLLIAQHHDVVALDIVPARVELLNDRISPI FT VDKEIQQFLKEDNIRFRATLDKFDAYQNADYVIIATPTDYDPKTNYFNTFSVESVIQDV FT ISINPAAVMIIKSTVPVGFTAAMRQKFATENIIFSPEFLREGKALYDNLYPSRIVIGEQ FT SERAREFAALLQEGAIKQEIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAETLG FT LNTRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVEANR FT TRKDFIADSILARKPKVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMQ FT EETFFNSRLERDLHCFKQQADVIISNRMAAELLDVAEKVYTRDLFGSD" FT misc_feature complement(63745..64905) FT /note="Pfam match to entry PF00984 UDPG_MGDP_dh, FT UDP-glucose/GDP-mannose dehydrogenase family, score 310.90, FT E-value 1.5e-89" FT CDS complement(65142..66548) FT /transl_table=11 FT /gene="STY2290" FT /gene_synonym="gnd" FT /product="6-phosphogluconate dehydrogenase, FT decarboxylating" FT /EC_number="1.1.1.44" FT /note="Similar to Salmonella typhimurium 6-phosphogluconate FT dehydrogenase, decarboxylating gnD SW:6PGD_SALTY (P14062) FT (468 aa) fasta scores: E(): 0, 99.4% id in 468 aa" FT /note="Orthologue of E. coli gnd (6PGD_ECOLI); Fasta hit to FT 6PGD_ECOLI (468 aa), 96% identity in 468 aa overlap" FT /db_xref="GOA:Q8Z5J3" FT /db_xref="HSSP:2PGD" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z5J3" FT /protein_id="CAD02443.1" FT /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAE FT NPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLEKGDIIIDGGNTF FT FQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKDAYELVAPILTKIAAVA FT EDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELANTFTEW FT NNGELSSYLIDITKDIFTKKDEDGNYLIDVILDEAANKGTGKWTSQSALDLGEPLSLIT FT ESVFARYISSLKAQRVAASKVLSGPKAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQL FT RAASDEYHWELNYGEIAKIFRAGCIIRAQFLQKITDAYAENAGIANLLLAPYFKKIADE FT YQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRTDK FT EGIFHTEWLE" FT misc_feature complement(65184..66515) FT /note="Pfam match to entry PF00393 6PGD, 6-phosphogluconate FT dehydrogenases, score 1173.70, E-value 0" FT misc_feature complement(65754..65792) FT /note="PS00461 6-phosphogluconate dehydrogenase signature" FT RBS complement(66555..66559) FT /note="possible RBS" FT CDS complement(66712..68142) FT /transl_table=11 FT /gene="rfbP" FT /gene_synonym="STY2291" FT /product="undecaprenyl-phosphate FT galactosephosphotransferase" FT /EC_number="2.7.8.6" FT /note="Similar to many e.g. Salmonella typhimurium FT undecaprenyl-phosphate galactosephosphotransferase rfbP FT SW:RFBP_SALTY (P26406) (476 aa) fasta scores: E(): 0, 98.3% FT id in 476 aa and Salmonella typhimurium FT galactosyl-1-phosphate transferase RFBP4452 TR:Q54016 FT (EMBL:U35435) (476 aa) fasta scores: E(): 0, 98.1% id in FT 476 aa. Contains hydrophobic, probable membrane-spanning FT regions" FT /db_xref="GOA:Q8Z5J2" FT /db_xref="InterPro:IPR003362" FT /db_xref="UniProtKB/TrEMBL:Q8Z5J2" FT /protein_id="CAD02444.1" FT /translation="MDNIDNKYNPQLCKIFLAISDLIFFNLALWLSLGCVYFTFDQVQR FT FIPQDQLDTRVITHFILSVVCVGWFWIRLRHYTYRKPFWYELKEIFRTIVIFAIFDLAL FT IAFTKWQFSRYVWVFCWTFAIILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARGAYS FT ALQSEEMMGFDVIAFFDTDASDAEINMLPVIKDTGTIWDLNRTGDVHYILAYEYTELEK FT THFWLRELSKHHCRSVSVVPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKR FT TFDIVCSIIILIIASPLMIYLWYKVTRDGGPAIYGHQRVGRHGKLFPCYKFRSMVMNSQ FT EVLKELLANDPIARAEWEKDFKLKNDPRITAVGRFIRKTSLDELPQLFNVLKGDMSLVG FT PRPIVSDELERYCDDVDYYLMAKPGMTGLWQVSGRNDVDYDTRVYFDSWYVKNWTLWND FT IAILFKTAKVVLRRDGAY" FT misc_feature complement(66712..82101) FT /note="capsular polysaccharide biosynthetic cluster FT (insertion relative to Escherichia coli). Base composition FT 37.8 % G+C" FT misc_feature complement(68038..68070) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS complement(68148..68151) FT /note="possible RBS" FT CDS complement(68214..69647) FT /transl_table=11 FT /gene="STY2292" FT /gene_synonym="rfbK" FT /product="phosphomannomutase" FT /EC_number="5.4.2.8" FT /note="Similar to many e.g. Salmonella typhimurium FT phosphomannomutase SW:RFBK_SALTY (P26405) (477 aa) fasta FT scores: E(): 0, 98.7% id in 476 aa" FT /db_xref="GOA:Q8Z5J1" FT /db_xref="InterPro:IPR016066" FT /db_xref="UniProtKB/TrEMBL:Q8Z5J1" FT /protein_id="CAD02445.1" FT /translation="MNVVNNSRDVIHSSGIVFGTSGARGLVKDFTPQVCAAFTVSFVAV FT MQEHFSFDTVALAIDNRPSSYGMAQACAAALADKGVNCIFYGVVPTPALAFQSMSDNMP FT AIMVTGSHIPFERNGLKFYRPDGEITKHDEAAILSVEDTCSHLELKELIVSEMAAVNYI FT SRYTSLFSTPFLKNKRIGIYEHSSAGRDLYKPLFIALGAEVISLGRSDNFVPIDTEAVS FT KEDREKARSWAKEFDLDAIFSTDGDGDRPLIADEAGQWLRGDILGLLCSLALGAEAVAI FT PVSCNSIISSGRFFKHVKLTKIGSPYVIEAFNELSRSYSRIVGFEANGGFLLGSDICIN FT EQNLHALPTRDAVLPAIMLLYKSRNISISALVNELPTRYTHSDRLQGITTDKSQSLISM FT GRENLSNLLSYIGLENEGAISTDMTDGMRITLRDGCIVHLRASGNAPELRCYAEANLLN FT RAQDLVNITLANIKKRCLP" FT misc_feature complement(68265..69608) FT /note="Pfam match to entry PF00408 PGM_PMM, FT Phosphoglucomutase/phosphomannomutase, score 617.70, FT E-value 6.8e-182" FT misc_feature complement(69291..69335) FT /note="PS00710 Phosphoglucomutase and phosphomannomutase FT phosphoserine signature" FT CDS complement(69634..71073) FT /transl_table=11 FT /gene="STY2293" FT /gene_synonym="rfbM2" FT /gene_synonym="manC2" FT /gene_synonym="cpsB2" FT /product="mannose-1-phosphate guanylyltransferase" FT /EC_number="2.7.7.22" FT /note="Similar to many e.g. Salmonella typhimurium FT mannose-1-phosphate guanylyltransferase SW:RFBM_SALTY FT (P26404) (479 aa) fasta scores: E(): 0, 98.7% id in 479 aa" FT /note="Paralogue of E. coli cpsB (MANC_ECOLI); Fasta hit to FT MANC_ECOLI (478 aa), 59% identity in 469 aa overlap" FT /db_xref="GOA:Q8Z5J0" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q8Z5J0" FT /protein_id="CAD02446.1" FT /translation="MSFLPVIMAGGTGSRLWPLSREYHPKQFLSVEGKLSMLQNTIKRL FT ASLSTEEPVVICNDRHRFLVAEQLREIDKLANNIILEPVGRNTAPAIALAAFCALQNAD FT NADPLLLVLAADHVIQDEIAFTKAVRHAEEYAANGKLVTFGIVPTHAETGYGYIRRGEL FT IGNDAYAVAEFVEKPDIDTASDYFKSGKYYWNSGMFLFRASSYLNELKYLSPEIYKACE FT KAVGHINPDLDFIRIDKEEFMSCPSDSIDYAVMEHTQHAVVIPMSAGWSDVGSWSSLWD FT ISNKDHQRNVLKGDIFAHACNDNYIYSEDMFISAIGVSNLVIVQTTDALLVANKDTVQD FT VKKIVDYLKRNDRNEYKQHQEVFRSWGKYNVIDSGKNYLVRCITVKPGEKFVAQMHHHR FT AEHWIVLSGTARVTKGEQIYMVSENESTFIPPDTIHALENPGMIPLQLIEIQSGTYLGE FT DDIIRLEQRSGFSKEWTNERS" FT RBS complement(69655..69660) FT /note="possible RBS" FT misc_feature complement(69676..70176) FT /note="Pfam match to entry PF01050 MannoseP_isomer, FT Mannose-6-phosphate isomerase, score 416.60, E-value FT 2.3e-121" FT misc_feature complement(70207..71064) FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score 489.00, E-value 3.8e-143" FT CDS complement(71074..72018) FT /transl_table=11 FT /gene="rfbN" FT /gene_synonym="STY2294" FT /product="putative rhamnosyltransferase" FT /EC_number="2.4.1.-" FT /note="Similar to many glycosyltransferases e.g. Salmonella FT typhimurium group B putative rhamnosyltransferase RfbN rfbN FT SW:RFBN_SALTY (P26403) (314 aa) fasta scores: E(): 0, 99.0% FT id in 314 aa and Salmonella typhimurium group E1 rhamnosyl FT transferase rfbN TR:Q54129 (EMBL:X60665) (315 aa) fasta FT scores: E(): 0, 74.4% id in 312 aa" FT /db_xref="GOA:Q8Z5I9" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I9" FT /protein_id="CAD02447.1" FT /translation="MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETV FT LLASDLKNISIFNIDSKDFNHGGTRNLAVTKTLDADVIIFLTQDAILADSDAIKNLVYY FT FSDPLIAAVCGRQLPHKDANPLAVHARNFNYSSKSIVKSKADIEKFGIKTVFMSNSFAA FT YRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYF FT DTGVFHACSPWIQRDFGGAGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLG FT KHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK" FT misc_feature complement(71500..72009) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferases, score 150.90, E-value 2.2e-41" FT CDS complement(72019..73080) FT /transl_table=11 FT /gene="rfbU" FT /gene_synonym="STY2295" FT /product="putative glycosyltransferase" FT /note="Similar to Salmonella typhimurium RfbU protein rfbU FT SW:RFBU_SALTY (P26402) (353 aa) fasta scores: E(): 0, 97.7% FT id in 353 aa" FT /db_xref="GOA:Q8Z5I8" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I8" FT /protein_id="CAD02448.1" FT /translation="MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYF FT EKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWLALRVLIKFGNKKLVCTTHHTIPLL FT RNQTITIHDIRPFYYPDSLIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNVDSE FT KISVIYNSVSKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRT FT DYAMSLQQMVVDLKLTDKVTFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMAS FT NTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIGQLPDAISRFNNYVARYDFDN FT MKQMVGNWLAESK" FT misc_feature complement(72073..72573) FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 145.20, E-value FT 1.2e-39" FT RBS complement(73090..73093) FT /note="possible RBS" FT CDS complement(73655..74656) FT /transl_table=11 FT /gene="rfbV" FT /gene_synonym="STY2296" FT /product="putative glycosyltransferase" FT /note="Similar to Salmonella enterica ORF14.1 TR:Q99192 FT (EMBL:M65054) (333 aa) fasta scores: E(): 0, 100.0% id in FT 333 aa, Salmonella typhimurium RfbV protein rfbV FT SW:RFBV_SALTY (P26401) (333 aa) fasta scores: E(): 0, 54.7% FT id in 331 aa and Yersinia enterocolitica putative FT glycosyltransferase WbcC wbcC TR:Q56864 (EMBL:U46859) (283 FT aa) fasta scores: E(): 0, 41.0% id in 273 aa" FT /db_xref="GOA:Q7CAW1" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q7CAW1" FT /protein_id="CAD02449.1" FT /translation="MKVSFCIPTYNRVKFIEDLLESINNQSSHSLIVEVCISDNASTDG FT TEESINIWRDRFNFPILYQRHNENIGPDRNYLSAVNMGTGDYCWIFGSDDILTKNSLAL FT MEDKLAAGSDIYLCDRRELDISMTKISNPHRRWLNGGSRLFSFSNEADLIEYFSKCNSV FT GGLFSYLSSIIVKRNKWSDVLFDESYIGTAYAHVYILLRIINNMNSTLQYISLPLVDCR FT GDNDTFESNGKARRIKIDFIGYLKLREDFYNNNTKIYISFGRVLTKERPWLYTSLAMAC FT YGDSTDRAELASFYKKLGYPKIATNLIFCLKGLASYTKKIKLAKMVIKKIFS" FT misc_feature complement(74117..74647) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferases, score 76.10, E-value 7.2e-19" FT CDS complement(74658..75956) FT /transl_table=11 FT /gene="rfbX" FT /gene_synonym="STY2297" FT /product="putative O-antigen transporter" FT /note="Similar to many e.g. Salmonella typhi TY2, group D1, FT putative O-antigen transporter rfbX SW:RFBX_SALTI (Q99191) FT (432 aa) fasta scores: E(): 0, 99.8% id in 432 aa. Contains FT hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q99191" FT /db_xref="UniProtKB/Swiss-Prot:Q99191" FT /protein_id="CAD02450.1" FT /translation="MRKLRLVRIPRHLIIAASSWLSKIIIAGVQLVSVKFLLEILGEES FT YAVFTLLTGLLVWFSIADIGIGSSLQNYISELKADRKSYDAYIKAAVHILFASLIILSS FT TLFFLSDKLSSLYLTSFSDELKNNSGSYFFIASILFIFIGVGSVVYKILFAELLGWKAN FT IINALSYLLGFLDVVAIHYLMPDSSITFALVALYAPVAILPIIYISFRYIYVLKAKVNF FT NTYKLLLSRSSGFLIFSSLSIIVLQTDYIVMSQKLSAADIIKYTVTMKIFGLMFFIYTA FT VLQALWPVCAELRVKMQWRKLHRIIFLNIIGGVFFIGLGTLFIYVLKDYIYSIIANGID FT YNISGVVFVLLAVYFSIRVWCDTFAMLLQSMNQLKILWLIVPCQALIGGVTQWYFAEHY FT GIVGILYGLILSFSLTVFWGLPVYYMYKSKRLA" FT CDS complement(76027..77043) FT /transl_table=11 FT /gene="rfbE" FT /gene_synonym="STY2298" FT /product="CDP-tyvelose-2-epimerase" FT /EC_number="5.1.3.-" FT /note="Identical to Salmonella typhi TY2, group D, FT CDP-tyvelose-2-epimerase rfbE SW:RFBE_SALTI (P14169) (338 FT aa) fasta scores: E(): 0, 100.0% id in 338 aa" FT /db_xref="GOA:P14169" FT /db_xref="InterPro:IPR016040" FT /db_xref="PDB:1ORR" FT /db_xref="UniProtKB/Swiss-Prot:P14169" FT /protein_id="CAD02451.1" FT /translation="MKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWL FT SSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTL FT NLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSP FT YGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI FT NKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKL FT LEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI" FT misc_feature complement(76033..77037) FT /note="Pfam match to entry PF01370 Epimerase, NAD dependent FT epimerase/dehydratase family, score 145.90, E-value FT 7.2e-40" FT CDS complement(77040..77879) FT /transl_table=11 FT /gene="rfbS" FT /gene_synonym="STY2299" FT /product="paratose synthase" FT /EC_number="1.-.-.-" FT /note="Similar to Salmonella typhi TY2, group D, paratose FT synthase rfbS SW:RFBS_SALTI (P14168) (279 aa) fasta scores: FT E(): 0, 99.6% id in 279 aa" FT /db_xref="GOA:P14168" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P14168" FT /protein_id="CAD02452.1" FT /translation="MKILIMGAFGFLGSRLTSYFESRHTVIGLARKRNNEATINNIIYT FT TENNWIEKILEFEPNIIINTIACYGRHNEPATALIESNILMPIRVLESISSLDAVFINC FT GTSLPPNTSLYAYTKQKANELAAAIIDKVCGKYIELKLEHFYGAFDGDDKFTSMVIRRC FT LSNQPVKLTSGLQQRDFLYIKDLLTAFDCIISNVNNFPKFHSIEVGSGEAISIREYVDT FT VKNITKSNSIIEFGVVKERVNELMYSCADIAELEKIGWKREFSLVDALTEIIEEEGK" FT RBS complement(77047..77053) FT /note="possible RBS" FT CDS complement(77914..79227) FT /transl_table=11 FT /gene="rfbH" FT /gene_synonym="STY2300" FT /product="putative dehydratase RfbH" FT /note="Similar to many e.g. Salmonella typhimurium strain FT LT2, group B, lipopolysaccharide biosynthesis protein RfbH FT rfbH SW:RFBH_SALTY (P26398) (437 aa) fasta scores: E(): 0, FT 99.5% id in 437 aa and Yersinia pseudotuberculosis FT CDP-4-keto-6-deoxy-D-glucose-3-dehydrase ddhC TR:Q05341 FT (EMBL:L01777) (437 aa) fasta scores: E(): 0, 87.4% id in FT 437 aa" FT /db_xref="GOA:Q8Z5I6" FT /db_xref="HSSP:1MDO" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I6" FT /protein_id="CAD02453.1" FT /translation="MTANNLREQISQLVAQYANEALSPKPFVAGASVVPPSGKVIGAKE FT LQLMVEASLDGWLTTGRFNDAFEKKLGEFIGVPHVLTTTSGSSANLLALTALTSPKLGE FT RALKPGDEVITVAAGFPTTVNPAIQNGLIPVFVDVDIPTYNIDASLIEAAVTEKSKAIM FT IAHTLGNAFNLSEVRRIADKYNLWLIEDCCDALGTTYEGRMVGTFGDIGTVSFYPAHHI FT TMGEGGAVFTKSGELKKIIESFRDWGRDCYCAPGCDNTCGKRFGQQLGSLPQGYDHKYT FT YSHLGYNLKITDMQAACGLAQLERVEEFVEQRKANFSYLKQGLQSCTEFLELPEATEKS FT DPSWFGFPITLKETSGVNRVELVKFLDEAKIGTRLLFAGNLIRQPYFANVKYRVVGELT FT NTDRIMNQTFWIGIYPGLTTEHLDYVVSKFEEFFGLNF" FT misc_feature complement(77938..79110) FT /note="Pfam match to entry PF01041 DegT_DnrJ_EryC1, FT DegT/DnrJ/EryC1/StrS family, score 588.70, E-value FT 3.5e-173" FT RBS complement(79237..79242) FT /note="possible RBS" FT CDS complement(79254..80333) FT /transl_table=11 FT /gene="rfbG" FT /gene_synonym="STY2301" FT /product="CDP-glucose 4,6-dehydratase" FT /EC_number="4.2.1.45" FT /note="Similar to Salmonella typhimurium LT2, group B, FT CDP-glucose 4,6-dehydratase rfbG SW:RFBG_SALTY (P26397) FT (359 aa) fasta scores: E(): 0, 99.2% id in 359 aa" FT /db_xref="GOA:Q8Z5I5" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I5" FT /protein_id="CAD02454.1" FT /translation="MIDKNFWQGKRVFVTGHTGFKGSWLSLWLTEMGAIVKGYALDAPT FT VPSLFEIVRLNDLMESHIGDIRDFEKLRSSIAEFKPEIVFHMAAQPLVRLSYEQPIETY FT STNVMGTVHLLEAVKQVGNIKAVVNITSDKCYDNREWVWGYRENEPMGGYDPYSNSKGC FT AELVASAFRNSFFNPANYEQHGVGLASVRAGNVIGGGDWAKDRLIPDILRSFENNQQVI FT IRNPYSIRPWQHVLEPLSGYIVVAQRLYTEGAKFSEGWNFGPRDEDAKTVEFIVDKMVT FT LWGDDASWLLDGENHPHEAHYLKLDCSKANMQLGWHPRWGLTETLSRIVKWHKAWIRGE FT DMLICSKREISDYMSATTR" FT CDS complement(80338..81111) FT /transl_table=11 FT /gene="rfbF" FT /gene_synonym="STY2302" FT /product="glucose-1-phosphate cytidylyltransferase" FT /EC_number="2.7.7.33" FT /note="Similar to Salmonella typhimurium strain LT2, group FT B, glucose-1-phosphate cytidylyltransferase rfbF FT SW:RFBF_SALTY (P26396) (257 aa) fasta scores: E(): 0, 99.6% FT id in 257 aa" FT /db_xref="GOA:Q8Z5I4" FT /db_xref="InterPro:IPR013446" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I4" FT /protein_id="CAD02455.1" FT /translation="MKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHG FT IKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAENRMEVHHKRVEPWNVTLVDTGDSS FT MTGGRLKRVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATFPPGRFGA FT LDIQAGQVRSFQEKPKGDGAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELM FT AFEHPGFWQPMDTLRDKVYLEGLWEKGKAPWKTWE" FT RBS complement(80341..80344) FT /note="possible RBS" FT misc_feature complement(80395..81108) FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score -5.60, E-value 2.6e-07" FT RBS complement(81119..81122) FT /note="possible RBS" FT CDS complement(81127..82101) FT /transl_table=11 FT /gene="rfbI" FT /gene_synonym="STY2303" FT /product="putative reductase RfbI" FT /note="Similar to Salmonella typhimurium LT2, group B, RfbI FT protein rfbI SW:RFBI_SALTY (P26395) (330 aa) fasta scores: FT E(): 0, 99.1% id in 323 aa and Yersinia pseudotuberculosis FT CDP-6-deoxy-delta-3,4-glucoseen reductase ascD or rfbI FT SW:ASCD_YERPS (P37911) (328 aa) fasta scores: E(): 0, 51.7% FT id in 327 aa" FT /db_xref="GOA:Q8Z5I3" FT /db_xref="HSSP:1FRR" FT /db_xref="InterPro:IPR001041" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I3" FT /protein_id="CAD02456.1" FT /translation="MSHIIKIFPSNIEFSGREDESILDAALSAGIHLEHSCKAGDCGIC FT ESDLLAGEVVDSKGNIFGQGDKILTCCCKPKTALELNAHFFPELAGQTKKIVPCKVNSA FT VLVSGDVMTLKLRTPPTAKIGFFPGQYINLHYKGVTRSYSIANSDESNGIELHVRNVPN FT GQMSSLIFGELQENTLMRIEGPCGTFFIRESDRPIIFLAGGTGFAPVKSMVEHLIQGKC FT RREIYIYWGMQDSKDFYSALPQQWSEQHDNVHYIPVVSGDDAEWGGRKGFVHHAVMDDF FT DSLEFFDIYACGSPVMIDASKKDFMMKNLSVEHFYSDAFTASK" FT misc_feature complement(81190..81519) FT /note="Pfam match to entry PF00175 oxidored_fad, FT Oxidoreductase FAD/NAD-binding domain, score 148.60, FT E-value 1.1e-40" FT misc_feature complement(81871..82089) FT /note="Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur FT cluster binding domains, score 50.80, E-value 2.9e-11" FT misc_feature complement(81967..81993) FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature" FT CDS complement(82107..82658) FT /transl_table=11 FT /gene="STY2304" FT /gene_synonym="rfbC" FT /product="dTDP-4-dehydrorhamnose 3,5-epimerase" FT /note="Similar to Salmonella typhimurium strain LT2, group FT B, dTDP-4-dehydrorhamnose 3,5-epimerase rfbC SW:RFBC_SALTY FT (P26394) (183 aa) fasta scores: E(): 0, 97.3% id in 183 aa" FT /note="Orthologue of E. coli rfbC (RFBC_ECOLI); Fasta hit FT to RFBC_ECOLI (185 aa), 69% identity in 169 aa overlap" FT /db_xref="GOA:Q8Z5I2" FT /db_xref="HSSP:1DZR" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I2" FT /protein_id="CAD02457.1" FT /translation="MMIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVT FT FVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNL FT SAENKRQLWIPEGFAHGFVTLSDYAEFLYKATNYYSPSSEGSILWNDETIGIEWPFSQL FT PELSAKDAAAPLLHQALLTE" FT misc_feature complement(82122..82649) FT /note="Pfam match to entry PF00908 dTDP_sugar_isom, FT dTDP-4-dehydrorhamnose 3,5-epimerase, score 436.60, E-value FT 2.2e-127" FT CDS complement(82659..83537) FT /transl_table=11 FT /gene="STY2305" FT /gene_synonym="rfbA" FT /product="TDP-glucose pyrophosphorylase" FT /EC_number="2.7.7.24" FT /note="Similar to Salmonella typhimurium strain LT2, group FT B, glucose-1-phosphate thymidylyltransferase rfbA FT SW:RFBA_SALTY (P26393) (292 aa) fasta scores: E(): 0, 97.9% FT id in 292 aa" FT /note="Fasta hit to RFFH_ECOLI (293 aa), 66% identity in FT 287 aa overlap" FT /note="Orthologue of E. coli rfbA (RBA1_ECOLI); Fasta hit FT to RBA1_ECOLI (293 aa), 92% identity in 290 aa overlap" FT /db_xref="GOA:Q8Z5I1" FT /db_xref="HSSP:1IIN" FT /db_xref="InterPro:IPR005907" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I1" FT /protein_id="CAD02458.1" FT /translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLM FT LAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGNND FT CALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDQNGTAVSLEEK FT PLQPKSNYAVTGLYFYDNSVVEMAKNLKPSSRGELEITDINRIYMDQGRLSVAMMGRGY FT AWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAFRKNFINAQQVIKLAGPLSKNDY FT GKYLLKMVKGL" FT misc_feature complement(82809..83525) FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score 397.00, E-value 1.8e-115" FT CDS complement(83585..84484) FT /transl_table=11 FT /gene="STY2306" FT /gene_synonym="rfbD" FT /product="dTDP-4-dehydrorhamnose reductase" FT /note="Similar to Escherichia coli dtdp-4-dehydrorhamnose FT reductase SW:RBD1_ECOLI (P37760) (299 aa) fasta scores: FT E(): 0, 84.3% id in 299 aa" FT /note="Similar to Salmonella typhimurium strain LT2, group FT B, dTDP-4-dehydrorhamnose reductase rfbD SW:RFBD_SALTY FT (P26392) (299 aa) fasta scores: E(): 0, 98.7% id in 299 aa" FT /note="Orthologue of E. coli rfbD (RBD1_ECOLI); Fasta hit FT to RBD1_ECOLI (299 aa), 84% identity in 299 aa overlap" FT /db_xref="GOA:Q8Z5I0" FT /db_xref="HSSP:1N2S" FT /db_xref="InterPro:IPR005913" FT /db_xref="UniProtKB/TrEMBL:Q8Z5I0" FT /protein_id="CAD02459.1" FT /translation="MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKG FT VAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYST FT DYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFA FT KTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVTLNKPEVAGLYHLVAGGTTT FT WHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQ FT WELGVKRMLTEMFTTTTI" FT CDS complement(84484..85569) FT /transl_table=11 FT /gene="STY2307" FT /gene_synonym="rfbB" FT /product="dTDP-glucose 4,6-dehydratase" FT /note="Similar to Salmonella typhimurium strain LT2, group FT B, dTDP-glucose 4,6-dehydratase rfbB SW:RFBB_SALTY (P26391) FT (361 aa) fasta scores: E(): 0, 99.4% id in 361 aa" FT /note="Fasta hit to RFFG_ECOLI (355 aa), 73% identity in FT 353 aa overlap" FT /note="Orthologue of E. coli rfbB (RBB1_ECOLI); Fasta hit FT to RBB1_ECOLI (361 aa), 88% identity in 361 aa overlap" FT /db_xref="GOA:Q8Z5H9" FT /db_xref="HSSP:1KEW" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H9" FT /protein_id="CAD02460.1" FT /translation="MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD FT ISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGT FT YVLLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAP FT SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP FT IYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIV FT PKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW FT VNNVKSGAYQSWIEQNYEGRQ" FT RBS complement(84493..84497) FT /note="possible RBS" FT misc_feature complement(84556..85563) FT /note="Pfam match to entry PF01370 Epimerase, NAD dependent FT epimerase/dehydratase family, score 689.70, E-value FT 1.5e-203" FT misc_feature complement(85024..85110) FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature" FT CDS complement(85946..86839) FT /transl_table=11 FT /gene="STY2308" FT /gene_synonym="galF" FT /product="UTP-glucose-1-phosphate uridylyltransferase" FT /EC_number="2.7.7.9" FT /note="Identical to Salmonella typhimurium strain LT2, FT group B, UTP--glucose-1-phosphate uridylyltransferase galF FT SW:GALF_SALTY (P26390) (297 aa) fasta scores: E(): 0, FT 100.0% id in 297 aa" FT /note="Fasta hit to GALU_ECOLI (301 aa), 59% identity in FT 289 aa overlap" FT /note="Orthologue of E. coli galF (GALF_ECOLI); Fasta hit FT to GALF_ECOLI (297 aa), 94% identity in 297 aa overlap" FT /db_xref="GOA:P0A2K8" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/Swiss-Prot:P0A2K8" FT /protein_id="CAD02461.1" FT /translation="MMNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIV FT AAGIKEIVLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQ FT AQPLGLGHSILCARPVVGDNPFIVVLPDIIIDDATADPLRYNLAAMVARFNETGRSQVL FT AKRMKGDLSEYSVIQTKEPLDNEGKVSRIVEFIEKPDQPQTLDSDLMAVGRYVLSADIW FT AELERTEPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNL FT KEGAKFRKSIEQLLHE" FT misc_feature complement(86003..86827) FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score 30.70, E-value 1e-09" FT CDS complement(87017..88420) FT /transl_table=11 FT /gene="STY2309" FT /product="putative exported protein" FT /note="Similar to Salmonella typhimurium colanic acid FT biosynthesis protein WcaM wcaM SW:WCAM_SALTY (P26389) (467 FT aa) fasta scores: E(): 0, 98.1% id in 467 aa. Contains FT probable N-terminal signal sequence" FT /note="Orthologue of E. coli WCAM_ECOLI; Fasta hit to FT WCAM_ECOLI (464 aa), 78% identity in 466 aa overlap" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H8" FT /protein_id="CAD02462.1" FT /translation="MPATKFSRRTLLTAGSALAVLPFLRALPVQAREPRQTVDIKDYPA FT DDGIASFKQAFADGQTVVVPSGWVCENINAAITIPAGKTLRIQGAVRGNGRGRFILLDG FT CQVVGEQGGSLHNVTLDVRGSDCVIKGVTMSGFGPVAQIFIGGKEPQVMRNLIIDDITV FT THANYAILRQGFHNQMDGARITHSRFSDLQGDAIEWNVAIHDRDILISDHVIERIDCTN FT GKINWGIGIGLAGSAYDNSYPEDQAVKNFVVANITGSDCRQLVHVENGKHFVIRNVKAK FT NITPDFSKNAGIDNATIAIYGCDNFVIDNIDMTNSAGMLIGYGVVKGKYLSIPQNFKLN FT AIRLDNRQVAYKLRGIQISSGNAPSFVAITNVRMTRATLELHNQPQHLFLRNINVMQTS FT AIGPALKMHFDLRKDVRGQFMARQDTLLSLANVHAINENGQSSVDIDRINHQTVNVEAV FT NFSLPKRGG" FT RBS complement(88423..88428) FT /note="possible RBS" FT CDS complement(88431..89651) FT /transl_table=11 FT /gene="STY2310" FT /product="putative glycosyltransferase" FT /note="Similar to Salmonella typhimurium putative colanic FT acid biosynthesis glycosyl transferase WcaL wcaL FT SW:WCAL_SALTY (P26388) (406 aa) fasta scores: E(): 0, 98.0% FT id in 406 aa" FT /note="Orthologue of E. coli WCAL_ECOLI; Fasta hit to FT WCAL_ECOLI (406 aa), 85% identity in 406 aa overlap" FT /db_xref="GOA:Q8Z5H7" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H7" FT /protein_id="CAD02463.1" FT /translation="MKVSFFLLKFPLSSETFVLNQITAFIDMGHEVEIVALQKGDTQHT FT HAAWEKYGLAAKTRWLQDEPQGRLAKLRYRACKTLPGLHRAATWKALNFTRYGDESRNL FT ILSAICAQAGQPFVADVFIAHFGPAGVTAAKLRELGVLRGKIETIFHGIDISSREVLSH FT YTPEYQQLFRRGDLMLPISDLWAGRLKSMGCPPEKIAVSRMGVDMTRFSHRPVKAPGMP FT LEMISVARLTEKKGLHVAIEACRQLKAQGVAFRYRILGIGPWERRLRTLIEQYQLEDVI FT EMPGFKPSHEVKAMLDDADVFLLPSITGTDGDMEGIPVALMETMAVGIPVVSTVHSGIP FT ELVEAGKSGWLVPENDAQALAARLAEFSRIDHDTLGSVIMRAREKVAQDFNQQAINRQL FT ASLLQTI" FT misc_feature complement(88497..89030) FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 144.70, E-value FT 1.6e-39" FT CDS complement(89648..90926) FT /pseudo FT /transl_table=11 FT /gene="STY2311" FT /gene_synonym="wcaK" FT /product="putative extracellular polysaccharide FT biosynthesis protein (pseudogene)" FT /note="Similar to Escherichia coli putative colanic acid FT biosynthesis protein WcaK wcaK SW:WCAK_ECOLI (P71242; FT P76380) (426 aa) fasta scores: E(): 0, 69.1% id in 236 aa FT and Erwinia amylovora amylovoran biosynthesis protein AmsJ FT amsJ SW:AMSJ_ERWAM (Q46637) (415 aa) fasta scores: E(): 0, FT 53.0% id in 232 aa. Contains multiple frameshifts. The FT sequence has been checked and is believed to be correct" FT RBS complement(89656..89660) FT /note="possible RBS" FT CDS complement(90948..92426) FT /transl_table=11 FT /gene="STY2314" FT /gene_synonym="wzxC" FT /product="putative transmembrane transport protein" FT /note="Orthologue of E. coli WZXC_ECOLI; Fasta hit to FT WZXC_ECOLI (492 aa), 86% identity in 492 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z5H6" FT /db_xref="InterPro:IPR002797" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H6" FT /protein_id="CAD02465.1" FT /translation="MSLRQKTISGVKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLLT FT VSLVIIALADTISDFGIANSIIQRKTIGHLELTTLYWLNVGLGIVVFAVVFWLSDAIAH FT VLHNPDLAPLIKTLSLAFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTVISA FT HYWPLALTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTADSIV FT NYINTNLSTLVLARILGASVAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQDDTEK FT LRVNFYKLLSVVGIINFPALLGLMVVANNFVPLVFGEKWNSIIPILKLLCVVGLLRSVG FT NPIGSLLMAKARVDISFKFNVFKTFLFIPAILIGGHLAGAIGVTLGFLVVQIINTILSY FT FVMIKPVLGSSYRQYILSLWLPFYLSLPTFITSYGAGKLVDGYLPLSGVFALQVVVGIL FT SFILMIIFSRNALVMEIKNQLVGSEKMKKLLRVG" FT misc_feature complement(91599..92408) FT /note="Pfam match to entry PF01943 Polysacc_synt, FT Polysaccharide biosynthesis protein, score 246.60, E-value FT 3.3e-70" FT RBS complement(92433..92436) FT /note="possible RBS" FT CDS complement(92528..93922) FT /transl_table=11 FT /gene="STY2315" FT /gene_synonym="wcaJ" FT /product="putative extracellular polysaccharide FT biosynthesis protein" FT /note="Shows weak similarity to Xanthomonas campestris gene FT responsible for xanthan overproduction xps2A TR:Q56813 FT (EMBL:X69956) (484 aa) fasta scores: E(): 0, 35.0% id in FT 486 aa. C-terminal half is similar to Rhizobium FT leguminosarum exopolysaccharide production protein pss FT SW:PSS_RHILP (P10498) (200 aa) fasta scores: E(): 1.7e-30, FT 47.4% id in 190 aa. Contains hydrophobic, probable FT membrane-spanning regions" FT /note="Orthologue of E. coli WCAJ_ECOLI; Fasta hit to FT WCAJ_ECOLI (464 aa), 88% identity in 464 aa overlap" FT /db_xref="InterPro:IPR017475" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H5" FT /protein_id="CAD02466.1" FT /translation="MTNLKKRERAKTNASLISMVQRFSDITIMFGGLWFICEVSGLPFL FT YMHLLVALITLVVFQMLGGMTDFYRSWRGVKMSTELTLLLQNWTLSLIFSAGLVAFNDD FT FDNRLATWLAWYALSSLGLVLCRSFIRFGAGWLRNRGYNTRRGAVAGDLPAGQALLDSF FT RNEPWLGFEVVGVYHDPKPGGVSADWAGNFEQLIDDAKASRIHNVYIAMSMSDGAMVKK FT LVRELADTTCSVILIPDVFTFNILHSRVEEMSGVPVVPLYDTPLSGINRLLKRAEDIVL FT ASLILLLISPVLCCIAPAVKLSSPGPVIFRQTRYGMDGKPSKVWRFRSMKVMENDKVVT FT QATQNDPRVTRVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYM FT LRHKMKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSIWFDIKIVFLTIFKGF FT VNKAAY" FT CDS complement(93976..95346) FT /transl_table=11 FT /gene="manB" FT /gene_synonym="STY2316" FT /gene_synonym="cpsG" FT /gene_synonym="rfbL" FT /product="phosphomannomutase" FT /EC_number="5.4.2.8" FT /note="Similar to Salmonella typhimurium LT2 FT phosphomannomutase manB or cpsG or rfbL SW:MANB_SALTY FT (P26341) (456 aa) fasta scores: E(): 0, 97.8% id in 456 aa" FT /note="Orthologue of E. coli cpsG (MANB_ECOLI); Fasta hit FT to MANB_ECOLI (456 aa), 89% identity in 456 aa overlap" FT /db_xref="GOA:Q8Z5H4" FT /db_xref="HSSP:1K2Y" FT /db_xref="InterPro:IPR016066" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H4" FT /protein_id="CAD02467.1" FT /translation="MTKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTIVLGG FT DVRLTSEVLKMALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDY FT NGMKLVREGARPISGDTGLRDVQRLAEAGDFPPVNDATRGSYRQISMRDAYIDHLLGYI FT SVNNLTPLKLVFNAGNGAAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPKGIPNPLL FT PECRDDTRKAVIEHGADMGIAFDGDFDRCFLFDEKGKFIEGYYIVGLLAEAFLEKHPGA FT KIIHDPRLTWNTEAVVTAAGGTPVMSKTGHAFIKERMRTEDAIYGGEMSAHHYFRDFAY FT CDSGMIPWLLVAELVCLKGQSLGELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAE FT EAQAVDRTDGLSMSFADWRFNLRSSNTEPVVRLNVESRGDIPLMEARTRTLLALLNQ" FT misc_feature complement(94018..95340) FT /note="Pfam match to entry PF00408 PGM_PMM, FT Phosphoglucomutase/phosphomannomutase, score 777.20, FT E-value 6.3e-230" FT misc_feature complement(95029..95073) FT /note="PS00710 Phosphoglucomutase and phosphomannomutase FT phosphoserine signature" FT CDS complement(95457..96899) FT /transl_table=11 FT /gene="manC" FT /gene_synonym="STY2317" FT /gene_synonym="cpsB" FT /gene_synonym="rfbM" FT /product="mannose-1-phosphate guanylyltransferase" FT /EC_number="2.7.7.22" FT /note="Similar to Salmonella typhimurium FT mannose-1-phosphate guanylyltransferase manC or cpsB or FT rfbM SW:MANC_SALTY (P26340) (480 aa) fasta scores: E(): 0, FT 99.8% id in 480 aa" FT /note="Orthologue of E. coli cpsB (MANC_ECOLI); Fasta hit FT to MANC_ECOLI (478 aa), 91% identity in 478 aa overlap" FT /db_xref="GOA:Q9ETZ0" FT /db_xref="InterPro:IPR006375" FT /db_xref="UniProtKB/TrEMBL:Q9ETZ0" FT /protein_id="CAD02468.1" FT /translation="MIMRQTKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQT FT TICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA FT TRQHTDCDPLMLVLAADHAIANEEAFRDAVRGAMPYADAGKLVTFGIVPDLPETGYGYI FT RRGDVVPGATDAVAFEVAQFVEKPGLETAQAYVASGDYYWNSGMFLFRAGRYLEELKKF FT RPDILAACEQAMRGVDPDLDFIRVDEEAFLACPEESIDYAVMERTADAVVMPMDAGWSD FT VGSWSSLWEISAHTPEGNVHHGDVISHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVL FT IADRHAVQDVKKVVEKIKADGRHEHHMHREVYRPWGKYDSIDAGERYQVKRITVKPGEG FT LSVQMHHHRAEHWVVVAGTARVTINGEVKLLGENESIYIPLGATHCLENPGKIPLDLIE FT VRSGSYLEEDDVVRFEDRYGRV" FT misc_feature complement(95475..95975) FT /note="Pfam match to entry PF01050 MannoseP_isomer, FT Mannose-6-phosphate isomerase, score 455.80, E-value FT 3.6e-133" FT misc_feature complement(96006..96875) FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score 468.90, E-value 4.1e-137" FT CDS complement(96896..98119) FT /transl_table=11 FT /gene="STY2318" FT /gene_synonym="wcaI" FT /gene_synonym="yefD" FT /product="putative glycosyltransferase" FT /note="Orthologue of E. coli yefD (WCAI_ECOLI); Fasta hit FT to WCAI_ECOLI (407 aa), 86% identity in 407 aa overlap" FT /db_xref="GOA:Q8Z5H3" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H3" FT /protein_id="CAD02469.1" FT /translation="MKILVYGINYSPELTGIGKYTGEMVAWMAREGHEVRVITAPPYYP FT QWKVGERYSAWRYRREEGEATVWRCPLYVPKQPSTLKRLLHLGSFALSSFFPLMAQRRW FT KPDRIIGVVPTLFCTPGMRLLATLSGARTVLHIQDYEVDAMLGLGMAGKGKRGSVARLA FT TAFERSALRNVDNVSTISRSMMNKAREKGVAAEKILFFPNWSEVARFQDVNDADVTALR FT QQLGLPEGKKIVLYSGNIGEKQGLEKVIDAAERLRDRPLIFAIVGQGGGKARLENMARE FT RGLLNIKFLPLQPYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAE FT PHTELGQLCARYPGIAVCVEPESTDALVDGISQALAMPKNNTTAREYAERTLNKENVLR FT QFIADIRG" FT misc_feature complement(96947..97471) FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 64.20, E-value FT 1.3e-16" FT CDS complement(98116..98595) FT /transl_table=11 FT /gene="STY2319" FT /gene_synonym="wcaH" FT /gene_synonym="yefC" FT /product="putative O-antigen biosynthesis protein" FT /note="Similar to ORFs found in O-antigen biosynthesis FT clusters e.g. Escherichia coli 0157 wbhG TR:O85341 FT (EMBL:AF061251) (169 aa) fasta scores: E(): 0, 61.4% id in FT 158 aa and Vibrio cholerae O22 ORF22-15 TR:O87154 FT (EMBL:AB012957) (161 aa) fasta scores: E(): 2.9e-23, 43.0% FT id in 149 aa" FT /note="Orthologue of E. coli yefC (WCAH_ECOLI); Fasta hit FT to WCAH_ECOLI (160 aa), 78% identity in 148 aa overlap" FT /db_xref="GOA:Q8Z5H2" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5H2" FT /protein_id="CAD02470.1" FT /translation="MTMFLRQEDFAAVVRTTPLISLDFIVENGQGEILLGQRLNRPAQG FT YWFVPGGRVCKDETLEAAFARLTQAELGVRLPLAAGTFYGVWQHFYDDNFSSEDFSTHY FT IVLGFRLRVAESDLRLPDAQHGSYRWLTPEQLLAGDNVHENSRAYFSPDAPAVGL" FT CDS complement(98592..99557) FT /transl_table=11 FT /gene="STY2320" FT /gene_synonym="fcl" FT /gene_synonym="wcaG" FT /gene_synonym="yefB" FT /product="GDP-fucose synthetase" FT /EC_number="5.1.3.-" FT /note="Similar to Escherichia coli GDP-fucose synthetase FT SW:FCL_ECOLI (P32055; P76382) (321 aa) fasta scores: E(): FT 0, 90.7% id in 321 aa" FT /note="Orthologue of E. coli yefB (FCL_ECOLI); Fasta hit to FT FCL_ECOLI (321 aa), 91% identity in 321 aa overlap" FT /db_xref="GOA:Q7AMR4" FT /db_xref="InterPro:IPR001509" FT /db_xref="UniProtKB/TrEMBL:Q7AMR4" FT /protein_id="CAD02471.1" FT /translation="MNKQRIFVAGHRGMVGSAIVRQLAQRGDVELVLRTRDELDLLDGR FT AVQAFFAGAGIDQVYLAAAKVGGIVANNTYPADFIYENMMIESNIIHAAHLHNVNKLLF FT LGSSCIYPKLARQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMP FT TNLYGPHDNFHPDNSHVIPALLRRFHEAAQSHAPEVVVWGSGTPMREFLHVDDMAAASI FT HVMELAREVWQENTAPMLSHINVGTGVDCTIRELAQTIAKVVGYQGRVVFDAAKPDGTP FT RKLLDVTRLHQLGWYHEISLEAGLAGTYQWFLENQQRFRG" FT misc_feature complement(98610..99542) FT /note="Pfam match to entry PF01370 Epimerase, NAD dependent FT epimerase/dehydratase family, score 0.30, E-value 2.8e-12" FT CDS complement(99560..100681) FT /transl_table=11 FT /gene="STY2321" FT /gene_synonym="gmd" FT /gene_synonym="yefA" FT /product="GDP-mannose 4,6-dehydratase" FT /EC_number="4.2.1.47" FT /note="Orthologue of E. coli yefA (GM4D_ECOLI); Fasta hit FT to GM4D_ECOLI (373 aa), 96% identity in 373 aa overlap" FT /db_xref="GOA:Q8Z5H1" FT /db_xref="HSSP:1DB3" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H1" FT /protein_id="CAD02472.1" FT /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD FT HIYQDPHSCNPKFHLHYGDLTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTAD FT VDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY FT AYWITVNYRESYGIYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMD FT SLRDWGHAKDYVRMQWMMLQQEQPEDFVIATGVQYSVRQFVELAAAQLGIKLRFEGEGI FT NEKGIVVSVTGHDAPGVKPRDVIVAVDPCYFRPAEVETLLGDPSKAHEKLGWKPEITLS FT EMVSEMVANDLEAAKKHSLLKSHGYEVAIALES" FT RBS complement(99566..99569) FT /note="possible RBS" FT misc_feature complement(99620..100669) FT /note="Pfam match to entry PF01370 Epimerase, NAD dependent FT epimerase/dehydratase family, score 26.40, E-value 8.1e-14" FT misc_feature complement(100166..100252) FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature" FT RBS complement(100690..100693) FT /note="possible RBS" FT CDS complement(100705..101259) FT /transl_table=11 FT /gene="wcaF" FT /gene_synonym="STY2322" FT /product="putative acetyltransferase" FT /EC_number="2.3.1.-" FT /note="Similar to acetyltransferases e.g. Rhizobium FT leguminosarum nodulation protein L nodL SW:NODL_RHILV FT (P08632) (190 aa) fasta scores: E(): 2.4e-10, 30.7% id in FT 137 aa" FT /note="Orthologue of E. coli WCAF_ECOLI; Fasta hit to FT WCAF_ECOLI (182 aa), 87% identity in 180 aa overlap" FT /db_xref="GOA:Q8Z5H0" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/TrEMBL:Q8Z5H0" FT /protein_id="CAD02473.1" FT /translation="MQDLSGFTVPKGFRGANALKVQLWWAVQATLFAGSPQILYRWRAF FT LLRLFGAKIGKNVVIRPSVKITYPWKLTVGDYAWIGDDAVLYTLGEINIGAHAVISQKG FT YLCTGSHDYTSAHFDINAAPIVIGEKCWLATDVFVAPGVTIGHGTVVGARSSVFKSLPA FT NAICRGNPAVVTRQRVQKVTP" FT misc_feature complement(100777..100863) FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature" FT misc_feature complement(100801..100854) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (four repeats), score 15.70, FT E-value 1.1" FT misc_feature complement(100996..101049) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (four repeats), score 2.40, E-value FT 3.6e+02" FT misc_feature complement(101056..101109) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (four repeats), score 15.70, FT E-value 1.1" FT RBS complement(101265..101268) FT /note="possible RBS" FT CDS complement(101275..102021) FT /transl_table=11 FT /gene="wcaE" FT /gene_synonym="STY2323" FT /product="putative glycosyltransferase" FT /note="Orthologue of E. coli WCAE_ECOLI; Fasta hit to FT WCAE_ECOLI (248 aa), 72% identity in 248 aa overlap" FT /db_xref="GOA:Q8Z5G9" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q8Z5G9" FT /protein_id="CAD02474.1" FT /translation="MFLSVVTVAFRNYEGVVKTWRSLRNLARDPGLSFEWIVVDGGSED FT GTREFLQKRHGEFNLRFISEKDRGIYDAMNKGIALAQGRYTLFLNSGDAFHDDAALFVR FT QLARQKGEAMYIGDALLDFGGGHKIRRKAKPGYYIYHSLPASHQAIFFPTAALKKYPYD FT LQYHVSSDYALAARLYKAGYPFRRINGLVSEFSMGGVSTSNNLELCQDAKNVQRKILRV FT PGFWAQLSYLLRLKTTGKTKARYNKV" FT misc_feature complement(101530..102012) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferases, score 18.70, E-value 0.0049" FT CDS complement(102034..103247) FT /pseudo FT /transl_table=11 FT /gene="wcaD" FT /gene_synonym="STY2324" FT /product="putative colanic acid polymerase (pseudogene)" FT /note="Similar to Escherichia coli putative colanic acid FT polymerase wcaD SW:WCAD_ECOLI (P71238; P76385) (405 aa) FT fasta scores: E(): 0, 93.6% id in 280 aa. Contains a FT frameshift after codon 119. The sequence has been checked FT and is believed to be correct" FT CDS complement(103222..104439) FT /transl_table=11 FT /gene="wcaC" FT /gene_synonym="STY2326" FT /product="putative glycosyltransferase" FT /note="Orthologue of E. coli WCAC_ECOLI; Fasta hit to FT WCAC_ECOLI (405 aa), 81% identity in 405 aa overlap" FT /db_xref="GOA:Q8Z5G8" FT /db_xref="UniProtKB/TrEMBL:Q8Z5G8" FT /protein_id="CAD02476.1" FT /translation="MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGKK FT SVSHHRYPQVIKQTPRGTAIANIALFRFLNRDLFGNLDNLYRTVIQTSGPLVLHFHVLH FT SYWLNLADIVTFCEKVKAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCPTLS FT NYPPVRVDRAHQLIDGKRQRFRDMLRLGCQFISPSQHVAEAFNSVYGAGLCRVINNGID FT LATEAILAQLSPVPLNPGKPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHTFGKFS FT PFTGQNVVNHGFETDKRKLMSALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSEA FT AQEVLAKSGGQTFAATDVLRLAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQQMLEEYV FT SFYQNL" FT RBS complement(103251..103255) FT /note="possible RBS" FT CDS complement(104436..104924) FT /transl_table=11 FT /gene="STY2327" FT /gene_synonym="wcaB" FT /product="putative acetyltransferase" FT /note="Similar to acetyltransferases e.g. Staphylococcus FT xylosus serine acetyltransferase cysE SW:CYSE_STAXY FT (P77985) (216 aa) fasta scores: E(): 8.2e-12, 39.7% id in FT 141 aa and to part of Arabidopsis thaliana serine FT acetyltransferase TR:Q43297 (EMBL:Z34888) (314 aa) fasta FT scores: E(): 9.4e-12, 39.3% id in 140 aa" FT /note="Orthologue of E. coli wcaB (WCAB_ECOLI); Fasta hit FT to WCAB_ECOLI (162 aa), 91% identity in 160 aa overlap" FT /db_xref="GOA:Q8Z5G7" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/TrEMBL:Q8Z5G7" FT /protein_id="CAD02477.1" FT /translation="MLEDLRANSWSLRPCCMVLAYRIAHFCSVWRKKNVLNNLWAAPVL FT VLYRVITECLFGYEIQAAATIGRRFTIHHGYAVVINKHVVAGDDFTIRHGVTIGNRGAD FT SLACPVIGHGVELGANVILLGDITIGNHVTIGAGSVVLDSIPDHALVVGEKARVKVST" FT misc_feature complement(104490..104576) FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature" FT CDS complement(105001..105777) FT /pseudo FT /transl_table=11 FT /gene="wcaA" FT /gene_synonym="STY2328" FT /product="putative glycosyl transferase (pseudogene)" FT /note="Similar to Escherichia coli putative colanic acid FT biosynthesis glycosyl transferase wcaA SW:WCAA_ECOLI FT (P77414) (279 aa) fasta scores: E(): 0, 85.3% id in 136 aa. FT Shows weak similarity to Pseudomonas aeruginosa FT acetyltransferase inducible by respiratory mucus derived FT from cystic fibrosis patients MigA migA TR:P95448 FT (EMBL:U70729) (299 aa) fasta scores: E(): 3.2e-07, 35.3% id FT in 116 aa. Contains a frameshift after codon 139. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAD02478.1" FT misc_feature complement(105250..105753) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferases, score 38.80, E-value 1.2e-07" FT CDS complement(105864..108023) FT /transl_table=11 FT /gene="wzc" FT /gene_synonym="STY2329" FT /product="putative tyrosine-protein kinase" FT /EC_number="2.7.1.112" FT /note="Similar to Escherichia coli tyrosine-protein kinase FT etk SW:ETK_ECOLI (P38134; P75879) (726 aa) fasta scores: FT E(): 0, 50.3% id in 725 aa, Erwinia amylovora amylovoran FT biosynthesis putative membrane-associated ATP-hydrolase FT (shown to have tyrosine-protein kinase activity) AmsA amsA FT SW:AMSA_ERWAM (Q46631) (726 aa) fasta scores: E(): 0, 53.3% FT id in 726 aa and to Klebsiella pneumoniae hypothetical FT protein in cps region (also shown to have tyrosine-protein FT kinase activity) SW:YC06_KLEPN (Q48452) (722 aa) fasta FT scores: E(): 0, 50.8% id in 721 aa. Contains hydrophobic, FT probable membrane-spanning regions" FT /note="Fasta hit to ETK_ECOLI (726 aa), 50% identity in 725 FT aa overlap" FT /note="Orthologue of E. coli P76387; Fasta hit to P76387 FT (732 aa), 88% identity in 720 aa overlap" FT /db_xref="GOA:Q8Z5G6" FT /db_xref="InterPro:IPR003856" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5G6" FT /protein_id="CAD02479.1" FT /translation="MTEKVKQSAAVTGSDEIDIGRLVGTVIEARWWVLGTTAIFALCAV FT IYTFFATPIYSADALVQIEQNAGNSLVQDINSALANKPPASDAEIQLIRSRLVLGKTVD FT DLDLDIAVTKNTFPLFGAGWERLMGRHNEMVKVTTFTRPETMSGQIFTLKVLGDKRYQL FT VSDGGFSAQGVVGQPLNKDGVTMRVEAIDARPDTEFTVSKFSTLGMINNLQNNLTVTET FT GKDTGVLNLTFTGEDRDQIRDILNSITRNYLQQDIAWKSEEAGKSLAFLAKQLPEVRSR FT LDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLFTKAHPAY FT RTLLEKRKGLEDKKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKQQELKITE FT ASTVGNVRIVDPAITQPGVLKPKKALIILGSIILGLMLSIVGVLLRSLFNRGIESPQAL FT EEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIEAIRSLRTSLH FT FAMMQAQNNVLMLTGVSSSIGKTFVCANLAAVISQTHKRVLLIDCDMRKGYTHELLGTN FT NVDGLSDILAGKGEIASCAKPTAIANFDLIPRGQVPPNPSELLMSERFGELIAWASSRY FT DLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFDQNGIQVKGVIL FT NSIFRRATGYQDYGYYEYEYQSDSK" FT CDS complement(108020..108469) FT /transl_table=11 FT /gene="wzb" FT /gene_synonym="STY2330" FT /product="putative protein-tyrosine phosphatase" FT /note="Similar to Erwinia amylovora probable low molecular FT weight protein-tyrosine-phosphatase AmsI amsI SW:AMSI_ERWAM FT (Q46630) (144 aa) fasta scores: E(): 1.9e-32, 58.0% id in FT 143 aa, and to Klebsiella pneumoniae putative low molecular FT weight protein-tyrosine-phosphatase SW:YOR5_KLEPN (Q48451) FT (144 aa) fasta scores: E(): 8.4e-29, 52.8% id in 144 aa. FT Shows weak similarity to Saccharomyces cerevisiae low FT molecular weight phosphotyrosine protein phosphatase ltp1 FT SW:PPAL_YEAST (P40347) (161 aa) fasta scores: E(): 2.1e-07, FT 29.8% id in 151 aa" FT /note="Fasta hit to YCCY_ECOLI (152 aa), 56% identity in FT 142 aa overlap" FT /note="Orthologue of E. coli WZB_ECOLI; Fasta hit to FT WZB_ECOLI (147 aa), 83% identity in 146 aa overlap" FT /db_xref="GOA:Q8Z5G5" FT /db_xref="HSSP:1D1Q" FT /db_xref="InterPro:IPR017867" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5G5" FT /protein_id="CAD02480.1" FT /translation="MFNKILVVCVGNVCRSPTAERLLKRFHPSLTVASAGLGALVGKGA FT DPAAASVASAHDLSLENHCARQISARLCREYDLILTMEKRHIAALCDIAPEMRSKVMLF FT GHWDSEREIPDPYRKSRDAFEAVYTLLERSARQWAQALNAEQGKP" FT misc_feature complement(108047..108463) FT /note="Pfam match to entry PF01451 LMWPc, Low molecular FT weight phosphotyrosine protein phosphatase, score 210.90, FT E-value 1.9e-59" FT CDS complement(108475..109614) FT /transl_table=11 FT /gene="wza" FT /gene_synonym="STY2331" FT /product="putative polysaccharide export protein" FT /note="Similar to many putative capsule polysaccharide FT export proteins. Shows weak similarity to Neisseria FT meningitidis capsule polysaccharide export outer membrane FT protein ctrA or NMB0071 SW:CTR1_NEIME (P32013) (391 aa) FT fasta scores: E(): 6.7e-15, 29.2% id in 408 aa and FT Neisseria meningitidis capsule polysaccharide export outer FT membrane protein CtrA SW:CTR2_NEIME (P32758) (387 aa) fasta FT scores: E(): 2.1e-14, 29.1% id in 402 aa. Contains probable FT N-terminal signal sequence" FT /note="Fasta hit to YCCZ_ECOLI (379 aa), 63% identity in FT 380 aa overlap" FT /note="Orthologue of E. coli WZA_ECOLI; Fasta hit to FT WZA_ECOLI (379 aa), 93% identity in 379 aa overlap" FT /db_xref="GOA:Q8Z5G4" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5G4" FT /protein_id="CAD02481.1" FT /translation="MMKSKMKLMPLLASLSLISGCTVLPGSNMSTMGKDVIKQQDADFD FT LDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVLNVTVWDHPELT FT TPAGQYRSSSDTGNWAQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQVDV FT NIAAFRSQKAYISGQVNKSGQQAITNVPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQ FT RISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSSMTLTEA FT LGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSLVMATEFRLQPYD FT VVYVTTAPVARWNRLINQLLPTISGVRYMTDTASDIHSW" FT misc_feature complement(109552..109584) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS 110288..111868 FT /transl_table=11 FT /gene="yegH" FT /gene_synonym="STY2332" FT /product="putative membrane protein" FT /note="Similar to e.g. Escherichia coli hypothetical FT protein SW:YEGH_ECOLI P76389; P94756() (527 aa) fasta FT scores: E(): 0, 90.3% id in 527 aa, Klebsiella pneumoniae FT hypothetical protein SW:YC19_KLEPN (Q48445) (320 aa) fasta FT scores: E(): 0, 82.8% id in 309 aa and Neisseria FT meningitidis conserved hypothetical integral membrane FT protein NMA1694 TR:Q9JTN9 (EMBL:AL162756) (518 aa) fasta FT scores: E(): 0, 46.5% id in 518 aa. Contains hydrophobic, FT possible membrane-spanning regions" FT /db_xref="GOA:Q8Z5G3" FT /db_xref="InterPro:IPR000644" FT /db_xref="UniProtKB/TrEMBL:Q8Z5G3" FT /protein_id="CAD02482.1" FT /translation="MEWIADPSIWAGLVTLIVIELVLGIDNLVFIAILAEKLPPGQRDR FT ARITGLILAMIMRLLLLASISWLVTLTKPLFSVQALSFSARDLIMLFGGFFLLFKATME FT LNERLEGKDSANPTQRKGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAAVII FT AISLMLLASKSLTRFVNNHPTIVILCLSFLLMIGFSLVAEGFGFHIPKGYLYAAIGFSV FT MIEALNQLAIFNRRRFLSANHTLRQRTTEAVMRLISGKKEDAELDAETAAMLADHDDSQ FT IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEAEIRALLEKNQHTRLVVTG FT ENEQEDLLGVVHVIDLLQQSLRGEPLNLRALIRQPLVFPETLPLLPALEQFRNARTHFA FT FVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQKNPDSSWTANGHMPLEDLV FT QYVPLPLDEKREYHTIAGLLMEYLQRIPQTGEEVQVGDYLLKTLQVESHRVQKVQLIPL FT HNGEPDQEM" FT misc_feature 111203..111370 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 23.60, E-value 0.0047" FT misc_feature 111392..111553 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 29.80, E-value 6.5e-05" FT CDS complement(111954..113810) FT /transl_table=11 FT /gene="STY2333" FT /gene_synonym="asmA" FT /gene_synonym="yegA" FT /product="putative outer membrane assembly protein" FT /note="Orthologue of E. coli yegA (ASMA_ECOLI); Fasta hit FT to ASMA_ECOLI (617 aa), 76% identity in 618 aa overlap. FT Contains probable N-terminal signal sequence" FT /db_xref="InterPro:IPR007844" FT /db_xref="UniProtKB/TrEMBL:Q8Z5G2" FT /protein_id="CAD02483.1" FT /translation="MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEY FT QLQLDGPLRWHVWPQLSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQV FT MLKGGVIQLTPQTEAVRSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVAGSVLVFQHEN FT DDQVTVRDIRLNMEQDAEHRGTFDFSGRVNRDQRDLALSFSGTVDASDYPHNLTAGIEQ FT LRWQLQGADLPAQGIEGQGQLQAQWQEAQKRLSFNHLNLTANDSSLTGHVQVTLAEQPE FT WQIDLRSSKLNLDNLLPHHSAVAQTGGAVSQGQNTLPLTRPVIASRVGAPPYQGLQSFT FT AEIALQADSVRWRGMDFTQVSTKMSNQTGLLDITELQGKLADGEMSLPGTLDARTASPR FT IEFHPRLNHVEIGTILKAFNYPISLTGKMSLVGDFSGADIDAEAFRHSWKGKAHVDMSN FT TRLEGMNFQQLVQQAVERSGGDAQQSQENMDNATRLDRFTTDLTLNKGTLTLDDMVGQS FT SMLALTGSGTLDLVKQSCDTQFNLRVLGGWNGDSNLITFLKETPVPLRVYGKWQELNYT FT LQVEQLLRKHLQDEAKRRLNDWADRNKDTRNGKDVKKLLNKL" FT RBS complement(113816..113819) FT /note="possible RBS" FT CDS complement(113849..114430) FT /transl_table=11 FT /gene="STY2334" FT /gene_synonym="dcd" FT /product="deoxycytidine triphosphate deaminase" FT /EC_number="3.5.4.13" FT /note="Orthologue of E. coli dcd (DCD_ECOLI); Fasta hit to FT DCD_ECOLI (193 aa), 96% identity in 193 aa overlap" FT /db_xref="GOA:P63906" FT /db_xref="HSSP:1OGH" FT /db_xref="InterPro:IPR008180" FT /db_xref="UniProtKB/Swiss-Prot:P63906" FT /protein_id="CAD02484.1" FT /translation="MRLCDRDIEAWLDEGRLSITPRPPVERINGATVDVRLGNKFRTFR FT GHTAAFIDLSGPKDEVSAALDRVMSDEIVLPDGEAFYLHPGELALAVTFESVTLPPDLV FT GWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPL FT SGPAARPYNRRQDAKYRDQQGAVASRIDKD" FT misc_feature complement(113864..114283) FT /note="Pfam match to entry PF00692 dUTPase, dUTPase, score FT 129.50, E-value 6.2e-35" FT RBS complement(114439..114444) FT /note="possible RBS" FT CDS complement(114521..115162) FT /transl_table=11 FT /gene="STY2335" FT /gene_synonym="udk" FT /product="uridine kinase" FT /EC_number="2.7.1.48" FT /note="Orthologue of E. coli udk (URK_ECOLI); Fasta hit to FT URK_ECOLI (213 aa), 96% identity in 213 aa overlap" FT /db_xref="GOA:P67409" FT /db_xref="InterPro:IPR000764" FT /db_xref="UniProtKB/Swiss-Prot:P67409" FT /protein_id="CAD02485.1" FT /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIP FT EDSYYKDQSHLSMEERVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQ FT ETVRVEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDS FT VMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE" FT misc_feature complement(114548..115135) FT /note="Pfam match to entry PF00485 PRK, FT Phosphoribulokinase, score 181.20, E-value 1.2e-50" FT misc_feature complement(115097..115120) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 115493..118483 FT /transl_table=11 FT /gene="STY2336" FT /gene_synonym="yegE" FT /product="putative membrane protein" FT /note="Similar to many putative membrane proteins e.g. FT Pseudomonas aeruginosa conserved hypothetical protein FT PA1181 TR:AAG04570 (EMBL:AE004548) (1120 aa) fasta scores: FT E(): 0, 32.3% id in 1096 aa and Vibrio cholerae sensory FT box/ggdef family protein vc0072 TR:Q9KVR7 (EMBL:AE004098) FT (768 aa) fasta scores: E(): 0, 26.0% id in 751 aa. Contains FT hydrophobic, probable membrane-spanning regions in the FT N-terminal approx. 300 aa" FT /note="Orthologue of E. coli yegE (YEGE_ECOLI); Fasta hit FT to YEGE_ECOLI (1105 aa), 67% identity in 1109 aa overlap" FT /db_xref="GOA:Q8Z5G1" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q8Z5G1" FT /protein_id="CAD02486.1" FT /translation="MSKPSQHVFVTVPHPLLRLVSLGLVAFVFTLFSLVLSRVGTQLAP FT LWFPTSIMMVAFYRHAGRLWPGIAVACSLGSIGASLTLFPAASLNFSWTAINIIEAATG FT AILLRKLLPSYNPLQNLNDWFRLAIGSAVIPPLLGGLLFWLIAPEAVASKAFLIWVLSE FT AIGALTLVPLGLLFKPHYLLRHRDPHLLLETLLTLVITLALSWLAMRYIPWPFTCVIVL FT LMWSAVRLPRMEAFLIFLATVIVVSLMLANDPTLLATPKTDVMVNMPWLPFLMILLPAN FT MMTMVMYAFRTERKHITESESRFRNAMEYSAIGMALVGTEGQWLQVNKSLSHFLGYSQD FT ELRTMTFQQLTWPEDLNNDLEQLNMLVRGDINSYSMEKRYYTRNGDVVWALLAVSLVRH FT KDNQPLYFIAQIEDINDLKQSEQENQRLMERITQANEALFQEKERLHITLDSIGEAVVC FT IDVAMNITFMNPIAEKMSGWRQEDALGAPLLTVLRITSGNKGPLLEDIYRANRSRSDME FT QEIVLHCHNGGSYDIHYSITPLSTLDGDKIGSVLVIQDVTESRKMLRQLSYSATHDALT FT QLANRASFEKQLQQRLQTIQESPQHHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM FT LSMLRSGDLLARLGGDEFGLLLPDCNSDSARFIATRLINAVNEYHFMWEGRLHRIGASA FT GITMINEHNCQLTEVVSQADIACYAAKNSGRGRLTVYEPQHALTSSKGMMPLEEQWHMI FT KNNLLLMLARNVAPPRTPEATSFWLVSLRLWTSEGEVMEERAFRAGLADSALHHALDRR FT VFHEFFRHAATAVASKGLSVALPLSAAGLYSATLIDELLEQLEHSPLPPRLLHLIIPAD FT VIVKQAQTAAATLRKLRQRGCQVILSHVGRDLQLFNLLPPHIVDYLLLDSDLIANVHES FT LMDEMLTSIIQGHAQHLDIKTLAGPVQNPQVLDTLSRIGVDLIYGDTIAEAQPLDLLLN FT TSYFAIH" FT misc_feature 116396..116593 FT /note="Pfam match to entry PF00989 PAS, PAS domain, score FT 4.30, E-value 15" FT misc_feature 116615..116743 FT /note="Pfam match to entry PF00785 PAC, PAC motif, score FT 44.60, E-value 3.9e-11" FT misc_feature 116819..117019 FT /note="Pfam match to entry PF00989 PAS, PAS domain, score FT 25.20, E-value 2.2e-05" FT misc_feature 117041..117169 FT /note="Pfam match to entry PF00785 PAC, PAC motif, score FT 27.20, E-value 4.2e-06" FT misc_feature 117179..117673 FT /note="Pfam match to entry PF00990 DUF9, Domain of unknown FT function DUF9, score 229.00, E-value 6.8e-65" FT misc_feature 117737..118450 FT /note="Pfam match to entry PF00563 DUF2, Domain of unknown FT function 2, score -30.20, E-value 5.3e-05" FT CDS complement(118451..119320) FT /transl_table=11 FT /gene="STY2337" FT /gene_synonym="alkA" FT /product="DNA-3-methyladenine glycosidase II" FT /EC_number="3.2.2.21" FT /note="Orthologue of E. coli alkA (3MG2_ECOLI); Fasta hit FT to 3MG2_ECOLI (282 aa), 74% identity in 279 aa overlap" FT /db_xref="GOA:Q8Z5G0" FT /db_xref="HSSP:1MPG" FT /db_xref="InterPro:IPR010316" FT /db_xref="UniProtKB/TrEMBL:Q8Z5G0" FT /protein_id="CAD02487.1" FT /translation="MFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEHR FT GLVSVRPHLPTHTVQVSVSAGLLPVAPACLAKVSRLFDLDCQPEQVAAVLGPLGEDRPG FT LRLPGSVDTFEQGVRAILGQLVSVAMAARLTAKVARRYGEALPDAPDYVCFPGPETLAL FT ADPLALKALGMPLRRAEALIHLAQATLAGKLALSAPPDIEQSVKNLQTFPGIGRWTANH FT FALRGWQAKDIFLPDDYLIKQRFAGMTAAQIRRYAERWKPWRSYALLHIWYTHGWQPSM FT DSEIAGIQ" FT misc_feature complement(118490..118957) FT /note="Pfam match to entry PF00730 HhH-GPD, HhH-GPD FT superfamily base excision DNA repair protein, score -28.30, FT E-value 0.012" FT RBS complement(119327..119332) FT /note="possible RBS" FT CDS 119454..120806 FT /transl_table=11 FT /gene="STY2338" FT /gene_synonym="yegD" FT /product="conserved hypothetical protein" FT /note="Similar to e.g Vibrio cholerae heat shock protein 70 FT family protein VC1386 TR:Q9KS73 (EMBL:AE004218) (450 aa) FT fasta scores: E(): 0, 54.0% id in 450 aa and Pseudomonas FT aeruginosa probable heat-shock protein PA4873 TR:AAG08258 FT (EMBL:AE004900) (421 aa) fasta scores: E(): 3.1e-31, 31.6% FT id in 395 aa. Shows weak simialrity to dnaK e.g. FT Brevibacillus choshinensis DnaK dnaK TR:Q9LCQ5 FT (EMBL:AB009842) (610 aa) fasta scores: E(): 6.2e-05, 25.6% FT id in 457 aa" FT /note="Orthologue of E. coli yegD (YEGD_ECOLI); Fasta hit FT to YEGD_ECOLI (450 aa), 88% identity in 450 aa overlap" FT /db_xref="GOA:Q8Z5F9" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/TrEMBL:Q8Z5F9" FT /protein_id="CAD02488.1" FT /translation="MFIGFDYGTANCSVAIMRDGHPQLLTMENNSALLPSMLCAPTREA FT VSEWLYRHHDVPATDEETQALLRRAIRYNREEDIEVGAQSVQFGLASLAHYIDDPQEVW FT FVKSPKSFLGASGLKPQQVALFEDLVCAMMVHILHTAHSQLPEAITQAVIGRPINFQGL FT GGDDANRQAQGILERAAKRAGFQEVVFQYEPVAAGLDYEATLREEKRVLVVDIGGGTTD FT CSMLLMGPQWRQRADRENSLLGHSGCRVGGNDLDIALAFKNLMPLLGMGGETEKGIALP FT VLPWWNAVAINDVPAQSDFYSSANGRLLNDLVRNAREADKVALLLKVWRQRLSYRLVRC FT AEESKIALSGQADVTARLPFISDDLAVAISQQGLEAALDQPLARILEQVQLALDSAQEK FT PDVIYLTGGSARSPLIKKALSEQLPGIPVAGGDDFGSVTAGLARWAEVVFR" FT misc_feature 120090..120131 FT /note="PS00329 Heat shock hsp70 proteins family signature FT 2" FT CDS 121247..122488 FT /transl_table=11 FT /gene="STY2339" FT /product="putative efflux system protein" FT /note="Similar to efflux-system proteins e.g. Neisseria FT gonorrhoeae membrane fusion protein MtrC precursor mtrC FT SW:MTRC_NEIGO (P43505) (412 aa) fasta scores: E(): 4.8e-26, FT 32.7% id in 342 aa and Escherichia coli acriflavin FT resistance protein a precursor acrA or acrE SW:ACRA_ECOLI FT (P31223) (397 aa) fasta scores: E(): 5.5e-23, 28.9% id in FT 356 aa. Contains possible N-terminal membrane anchor" FT /note="Fasta hit to ACRE_ECOLI (385 aa), 31% identity in FT 331 aa overlap" FT /note="Orthologue of E. coli YEGM_ECOLI; Fasta hit to FT YEGM_ECOLI (415 aa), 83% identity in 415 aa overlap" FT /db_xref="GOA:Q8Z5F8" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5F8" FT /protein_id="CAD02489.1" FT /translation="MKGSNTFRWAIAIGVVVAAAAFWFWHSRSESPTAAPGVAAQAQHT FT AAAGRRGMRDGPLAPVQAATATTQAVPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQE FT GQQVNAGDLLAQIDPSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKTNLVSRQE FT LDAQQALVNETQGTIKADEANVASAQLQLDWSRITAPVSGRVGLKQVDVGNQISSSDTA FT GIVVITQTHPIDLIFTLPESDIATVVQAQKAGKTLVVEAWDRTNSHKLSEGVLLSLDNQ FT IDPTTGTIKIKARFTNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGHFVWVL FT NDENNVSKKRVKIGIQDNRNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVEPQTTMADE FT KSPSRHEGQKGARA" FT misc_feature 121499..122371 FT /note="Pfam match to entry PF00529 HlyD, HlyD family FT secretion protein, score 79.80, E-value 5.8e-20" FT CDS 122488..125610 FT /transl_table=11 FT /gene="STY2340" FT /gene_synonym="yegN" FT /product="putative RND-family transporter protein" FT /note="Fasta hit to YEGO_ECOLI (1025 aa), 50% identity in FT 1023 aa overlap" FT /note="Orthologue of E. coli YEGN_ECOLI; Fasta hit to FT YEGN_ECOLI (1040 aa), 92% identity in 1040 aa overlap" FT /note="Similar to many . Contains hydrophobic, probable FT membrane-spanning regions" FT /db_xref="GOA:Q8Z5F7" FT /db_xref="HSSP:1IWG" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5F7" FT /protein_id="CAD02490.1" FT /translation="MQVLPPGSTGGPSRLFILRPVATTLLMAAILLAGIIGYRFLPVAA FT LPEVDYPTIQVVTLYPGASPDVMTSSVTAPLERQFGQMSGLKQMSSQSSGGASVVTLQF FT QLTLPLDVAEQEVQAAINAATNLLPSDLPNPPIYSKVNPADPPIMTLAVTSNAMPMTQV FT EDMVETRVAQKISQVSGVGLVTLAGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANV FT NSAKGSLDGPERAVTLSANDQMQSADEYRKLIIAYQNGAPVRLGDVATVEQGAENSWLG FT AWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASV FT RDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLM FT ALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPL FT LFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMMCARMLSRQSLRKQNRFSRACERM FT FDRVIASYGRGLAKVLNHPWLTLSVAFATLLLSVMLWITIPKGFFPVQDNGIIQGTLQA FT PQSSSYASMAQRQRQVAERILQDPAVQSLTTFVGVDGANPTLNSARLQINLKPLDARDD FT RVQQVISRLQTAVATIPGVALYLQPTQDLTIDTQVSRTQYQFTLQATTLDALSHWVPKL FT QNALQSLPQLSEVSSDWQDRGLAAWVNVDRDSASRLGISMADVDNALYNAFGQRLISTI FT YTQANQYRVVLEHNTASTPGLAALETIRLTSRDGGTVPLSAIARIEQRFAPLSINHLDQ FT FPVTTFSFNVPEGYSLGDAVQAILDTEKTLALPADITTQFQGSTLAFQAALGSTVWLIV FT AAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALIIAGSELDIIAIIGIILLIGI FT VKKNAIMMIDFALAAEREQGMSPRDAIFQACLLRFRPILMTTLAALLGALPLMLSTGVG FT AELRRPLGIAMVGGLLVSQVLTLFTTPVIYLLFDRLSLYVKSRFPRHKEEA" FT misc_feature 122521..125556 FT /note="Pfam match to entry PF00873 ACR_tran, AcrB/AcrD/AcrF FT family, score 1513.00, E-value 0" FT RBS 125600..125605 FT /note="possible RBS" FT CDS 125611..128691 FT /transl_table=11 FT /gene="STY2341" FT /product="putative RND-family transporter protein" FT /note="Fasta hit to YEGN_ECOLI (1040 aa), 50% identity in FT 1021 aa overlap" FT /note="Orthologue of E. coli YEGO_ECOLI; Fasta hit to FT YEGO_ECOLI (1025 aa), 92% identity in 1025 aa overlap" FT /note="Similar to many . Contains hydrophobic, probable FT membrane-spanning regions" FT /db_xref="GOA:Q8Z5F6" FT /db_xref="HSSP:1IWG" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5F6" FT /protein_id="CAD02491.1" FT /translation="MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVI FT MVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGA FT ARDVQAAINAAQSLLPGGMPSRPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLA FT QTIAQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIED FT SVHRWQIQTNDELKTAAEYQPLIIHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAI FT LLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAI FT SVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFV FT VDDAIVVLENIARHLEARMKPLQAALQGTREVGFTVISMSLSLVAVFLPLLLMGGLPGR FT LLREFAVTLSVAIGISLVVSLTLTPMMCGWMLKSSKPRTQPRKRGVGRLLVALQQGYGT FT SLKWVLNHTRLVGVVFLGTVALNIWLYIAIPKTFFPEQDTGVLMGGIQADQSISFQAMR FT GKLQDFMKIIRDDPAVNNVTGFTGGSRVNSGMMFITLKPRGERKETAQQVIDRLRVKLA FT KEPGAKLFLMAVQDIRVGGRQANASYQYTLLSDSLPALREWEPKIRKALSALPQLADVN FT SDQQDNGAEMNLIYDRDTMSRLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVD FT PRYSQDISALEKMFVINRDGKAIPLSYFAQWRPANAPLSVNHQGLSAASTIAFNLPTGT FT SLSQATEAIDRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILY FT ESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALE FT AQRSGGLTPEQAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGG FT LVMSQLLTLYTTPVVYLFFDRLRLRFSRKNSKPVVEI" FT misc_feature 125617..128637 FT /note="Pfam match to entry PF00873 ACR_tran, AcrB/AcrD/AcrF FT family, score 1504.60, E-value 0" FT CDS 128688..130100 FT /transl_table=11 FT /gene="STY2342" FT /gene_synonym="yegB" FT /product="putative transporter protein" FT /note="Fasta hit to YIEO_ECOLI (475 aa), 46% identity in FT 459 aa overlap" FT /note="Orthologue of E. coli YEGB_ECOLI; Fasta hit to FT YEGB_ECOLI (471 aa), 86% identity in 469 aa overlap" FT /note="Similar to many putative major facilitator family FT transporter proteins. Contains hydrophobic, probable FT membrane-spanning regions" FT /db_xref="GOA:Q8Z5F5" FT /db_xref="InterPro:IPR001411" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5F5" FT /protein_id="CAD02492.1" FT /translation="MTEFPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPL FT HMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLA FT RVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEYASW FT HWIFLINIPVGIVGAMATFMLMPNYTIETRRFDLPGFLLLAIGMAVLTLALDGSKSMGI FT SPWTLAGLAAGGAAAILLYLFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIGSGMLP FT FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQIVNRFGYRRVLVATTLGLALV FT SLLFMSVALLGWYYLLPLVLLLQGMVNSARFSSMNTLTLKDLPDTLASSGNSLLSMIMQ FT LSMSIGVTIAGMLLGMFGQQHIGIDSSATHHVFMYTWLCMAVIIALPAIIFARVPNDTQ FT QNMVISRRKRSL" FT RBS 130088..130093 FT /note="possible RBS" FT CDS 130100..131503 FT /transl_table=11 FT /gene="STY2343" FT /gene_synonym="baeS" FT /product="putative two-component system sensor kinase" FT /EC_number="2.7.3.-" FT /note="Orthologue of E. coli baeS (BAES_ECOLI); Fasta hit FT to BAES_ECOLI (467 aa), 89% identity in 467 aa overlap" FT /db_xref="GOA:Q8Z5F4" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q8Z5F4" FT /protein_id="CAD02493.1" FT /translation="MKVWRPGITGKLFLAIFATCIVLLISMHWAVRVSFERGFIDYIKH FT GNEQRLQMLGDALGDQYQQHGNWRFLRNNDRFVFQILRSFEHDNDRDKPGPGMPPHGWR FT TQFWVVDQNGRVLVGPRGPVPHDGTRRPILVNGVEVGAIIASPVERLTRNTDINFDMQQ FT RRASWMIVALSTLLAALATFLLARGLLAPVKRLVEGTHRLAAGDFTTRVTPTSADELGK FT LAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRQFTPESVTSL FT QAEVGTLTKLVDDLHQLSLSDEGALAYQKTTVDLVPQLEVAGGAFRERFTSRGLTLHYA FT LPDSMTVFGDPDRLMQLFNNLLENSLRYTDSGGGLHISAEQRDKSLFLTFADSAPGVSD FT EQLQKLFDRFYRTEVSRNRASGGSGLGLAICVNIVHAHNGHLHAAHSPFGGVSITVELP FT LDRDLQREV" FT misc_feature 130598..130807 FT /note="Pfam match to entry PF00672 DUF5, HAMP domain, score FT 79.80, E-value 5.7e-20" FT misc_feature 130847..131473 FT /note="Pfam match to entry PF00512 signal, Histidine FT kinase, score 242.90, E-value 4.6e-69" FT CDS 131500..132222 FT /transl_table=11 FT /gene="STY2344" FT /gene_synonym="baeR" FT /product="putative two-component system response regulator" FT /note="Fasta hit to TORR_ECOLI (230 aa), 37% identity in FT 231 aa overlap" FT /note="Fasta hit to YLCA_ECOLI (227 aa), 35% identity in FT 223 aa overlap" FT /note="Fasta hit to RSTA_ECOLI (242 aa), 33% identity in FT 228 aa overlap" FT /note="Fasta hit to YGIX_ECOLI (219 aa), 35% identity in FT 222 aa overlap" FT /note="Fasta hit to OMPR_ECOLI (239 aa), 37% identity in FT 241 aa overlap" FT /note="Fasta hit to ARCA_ECOLI (238 aa), 32% identity in FT 233 aa overlap" FT /note="Fasta hit to CPXR_ECOLI (232 aa), 37% identity in FT 225 aa overlap" FT /note="Fasta hit to PHOB_ECOLI (229 aa), 40% identity in FT 224 aa overlap" FT /note="Fasta hit to PHOP_ECOLI (223 aa), 33% identity in FT 224 aa overlap" FT /note="Fasta hit to BASR_ECOLI (222 aa), 35% identity in FT 220 aa overlap" FT /note="Fasta hit to KDPE_ECOLI (225 aa), 32% identity in FT 220 aa overlap" FT /note="Fasta hit to CREB_ECOLI (229 aa), 43% identity in FT 219 aa overlap" FT /note="Orthologue of E. coli baeR (BAER_ECOLI); Fasta hit FT to BAER_ECOLI (240 aa), 96% identity in 240 aa overlap" FT /db_xref="GOA:Q8Z5F3" FT /db_xref="HSSP:1B00" FT /db_xref="InterPro:IPR001867" FT /db_xref="UniProtKB/TrEMBL:Q8Z5F3" FT /protein_id="CAD02494.1" FT /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLINHGDK FT VLPYVRQTPPDLILLDLMLPGIDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGA FT DDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLMIDESRFQASWCGKALDLTP FT AEFRLLKTLSLEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFI FT RAVYGVGYRWEADACRLV" FT misc_feature 131530..131862 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 104.90, E-value 1.5e-27" FT misc_feature 131968..132186 FT /note="Pfam match to entry PF00486 trans_reg_C, FT Transcriptional regulatory protein, C terminal, score FT 120.10, E-value 1.2e-34" FT CDS 132491..132793 FT /transl_table=11 FT /gene="STY2345" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5F2" FT /protein_id="CAD02495.1" FT /translation="MTETSSHRYKPRNIINAPNVKSSIFSRSQQRGDSENIQRWLSNHF FT YRWIIGDFPHVYPVRSVADYAVYFSPDAEIPAWVAMSAFTTLTFSTRNLWQWKEI" FT CDS 132793..133677 FT /transl_table=11 FT /gene="STY2346" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5F1" FT /protein_id="CAD02496.1" FT /translation="MEFLSRQEGTRLETKLQRINCFTVLAMREAEHQKMQHLREQGWYP FT SNSEALKPVMAVNNGVLVELDATNPGLRSEMAYESWHMQHCVGDFDNKGALSGGYGDYY FT ARQIEQQKLRLFSLRDGNNIPHVTISLVVGNNGLSIDQIKGKQNRHPIKKYANDVLSLL FT RHLQPLPERHADCEGMGIVYESTPEYSGWKFITHIHDLNFLLNVLHDNFHLMEHFPTPP FT VALQWLLLHSAPEALRYLQVVDPNVATAAEMLFPRHEWHPTLAGKNTSSEPFEIESLTL FT QTTRYLPVIKEVQ" FT CDS 133687..134394 FT /transl_table=11 FT /gene="STY2347" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5F0" FT /protein_id="CAD02497.1" FT /translation="MFLLLPPYFLAGATTKKNKPLIAARIAEEKEKDRLKDLRRDTRRR FT QWALALADILARRNGLPIKGVELVFKLDDDKHRYLAQQVKKELGLSENLNGAALRHKVE FT DILRRWPAGIGSSPSTFYHHLAAQGQVRDALAFDCMRTAFLTRCIAGLGWCDENEAWLV FT LLLNAQRAQDCFDSWEDYATAYVRARRVWLTLRDTPIALAGRDLQEATHYLQDPVSRWR FT QLPWNEFKIFEPI" FT RBS 134394..134398 FT /note="possible RBS" FT CDS 134405..136516 FT /transl_table=11 FT /gene="STY2348" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E9" FT /protein_id="CAD02498.1" FT /translation="MEQDDRLLNAMFEMCNHKNPLNDGQREWHIADIPGLLREERYDEL FT DERYNQALTESFTSREAEKRYFFAWNQMDNPFYDMDTLVEAGPQGLALIKNWQRARPRS FT THAWLAEAQYWNHRAWLYRSYGWARETTRAMWICAAACNERMVIAALNAIDCEPRQWMA FT AALTSTNSKVFGQPDWLVEFLEGADVAGQPLMEDLAEYHRHSPQEVDALMAHSGLSFAD FT AVCPNLPRPSVLPECNDDAGQKYWLAVCLAIFPTAFYVLDEYIPFRMPRWGGSHEEIRE FT FLESSVCDHLSAAEREHLELLIWWDDHRDLRIKEVDSPAEQERIIAKAEEISLRAHIQE FT SRHNTLKWLRVCYSDLDDNDALWRTLQRSIVEKVKFNNYFFDDTIKFALRDFPDTWWMY FT NFLCQNAQQTEFAVPKIRRGYFQYAGLLGFEKDEAQGLAWLDSVADIQYNHNWRAAIKN FT FDWFGLPEHFVPLAELGAQRNIPAALNLLGLEHNNKENNGLLPYDPAIALGYFQRAAEI FT LHRRLALRESTPYKLIDNGGYTDYENDLQNIHFSIGICNQRLSKQELDTEKRSAYEKEL FT LDNLWLAHQFGHKEAWGLFLLNIFEVKDITLAHKHLELVQQEANKGTLHAMVTLSRLHG FT NKHDRTLFNMKLSARWAHFAFTLYPDNEIVMDCLDHLHFDSFWKRFRFAWYTVRIPNSE FT LPGQVNSMV" FT CDS 136521..137240 FT /transl_table=11 FT /gene="STY2349" FT /product="putative exported protein" FT /note="Unknown function. Contains probable N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E8" FT /protein_id="CAD02499.1" FT /translation="MIIQRKSLFLCALLLLFATARAEITEQQIEADCAKIPVLASQGEQ FT LYKTQKYAKALDAFEQLAAWSESCALDDNAIATAYNNVALTWIREGEWRKARAWLMLRP FT NDSKSIYNLKLIKDKLSVLPPPVSTAGEYWRYAGRASWNVLSVKALPTPSRYQVNFQGY FT WFGLMGIYFGPNIGEFYAEITLENDKAIVALREGDDIHCDISLAFSSETIDASTDTFVD FT CGFGANVRADGHYLRVE" FT misc_feature complement(137349..148512) FT /note="Base composition: 37.8 % G+C" FT CDS complement(137394..138107) FT /transl_table=11 FT /gene="STY2350" FT /product="putative exported protein" FT /note="Unknown function. Contains possible N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E7" FT /protein_id="CAD02500.1" FT /translation="MPIMNNYRLTFSLCLLRSAILFGIILISVNCNNQKSKELVLPVDS FT TQFTQLACYYKDINSDDNIMELKLPDEYKEKTNLFNQQEIKVPVKGESFLSPYIGDGVR FT YYELGYFEHDGNTYKLIIYNKIGESDTLLLNVQINSYDAKGNLVDALLLSSFFAYEDIV FT RFSDFVIRQDYTISIDSYVIYRWYEDSKDGHLVTIKFKDQAPQIYIKEQYQMENGRFKL FT ISRNAVSQGEKRSER" FT CDS complement(138209..138652) FT /transl_table=11 FT /gene="STY2351" FT /product="putative exported protein" FT /note="Unknown function. Contains probable N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E6" FT /protein_id="CAD02501.1" FT /translation="MKWIIMVLVFSFSNVYAEDCSQQDFDKADMALDSLASWKAVDGFY FT SRHSQCDVGYLREGTSEKIIRLLVDRWGELNELSALIKRKPALGDYVIDHIGEILDVKD FT VEKIRDYSASHCQIDSKDLCKKLHDAAVYILPYMSSQYQYLNN" FT CDS complement(138768..139217) FT /transl_table=11 FT /gene="STY2352" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E5" FT /protein_id="CAD02502.1" FT /translation="MVSSTYGEENYKNIHFKNATINIPARWVANKKDDCLLISKNHINV FT FSYLYVCTDAATNKNSFFTKNDDGEWEAVTDGVPVLADVNITPKFIGMSAIVSCRYKDD FT AGYHIDQCFQAVIVLSTNIMFVFIGRGDSSLFNNYKEIYRSFKVK" FT CDS complement(139285..139764) FT /transl_table=11 FT /gene="STY2353" FT /product="putative exported protein" FT /note="Unknown function. Contains possible N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E4" FT /protein_id="CAD02503.1" FT /translation="MKYMKHFFLILFGISSPFICLATSVEFNVTKGIKASITWVDNKKV FT EYEITGSDRVAKRGYYDVDTENNIHVKYGDYNFDGKEDFVIWYTDDGMGIYDIYRVFLY FT SEKMADFKEIKPSCGDDFINLNLNKKKRELISLYYSHNEAQRCITNVFVGENKLK" FT RBS complement(139771..139775) FT /note="possible RBS" FT CDS complement(139874..140476) FT /transl_table=11 FT /gene="STY2355" FT /product="putative exported protein" FT /note="Unknown function. Contains possible N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E3" FT /protein_id="CAD02504.1" FT /translation="MYKKIVILVITLIIIFFGGGWYMHKSQQQMATLVISDSENALDYP FT NKRKWFDASRWLSTSQYIKIDDFYLLNLKHHPVNNINDAGIIVILHFAIRDAIKKFPEL FT SKLSQMDNKEFFHFMQNKLSNEYLRTKFNEDTLEPTDDYFLFFFTYNEISYEVELLRKV FT TEHGMMFVPYGYQVNKKGDWHRMHPSTYSCFNDIQSN" FT CDS complement(140545..140823) FT /transl_table=11 FT /gene="STY2356" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E2" FT /protein_id="CAD02505.1" FT /translation="MGVVFTKLPLKDNTRGFIDLDMGLAFYRDKDNVLASFIENKTGDF FT YKPRQAYGDLASVNMVIYDCIDFYHSKELNIFLRKIISERNIRNEND" FT CDS complement(140793..141488) FT /transl_table=11 FT /gene="STY2357" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E1" FT /protein_id="CAD02506.1" FT /translation="MMLKIVMLFLMFFPCYCLPMDIKNIKDCKLEEGNRVKLISLSTVD FT GSTPYLIFDNVIVSAFLDGSIYSGDIILSKYIHHSLIFALNYGAPYMKGCLITGLSASA FT ERSYKPNGFCFAERNIPESVWFGEDHTLIIIKNNNSVGEWRGNYIIYDSRGDEAQTFNK FT LPDTKNYKIYRLDLYYCSCYVFWEDRQVMRIQKRTFLKNFLVSIKIFHLLSVLKKIMKK FT WALFLLSYL" FT CDS complement(141559..142059) FT /transl_table=11 FT /gene="STY2358" FT /product="conserved hypothetical protein" FT /note="Similar to Neisseria meningitidis hypothetical FT protein NMB0488 TR:Q9K0T5 (EMBL:AE002405) (164 aa) fasta FT scores: E(): 4.1e-22, 41.1% id in 163 aa and Neisseria FT meningitidis hypothetical protein NMB1489 TR:Q9JYP3 FT (EMBL:AE002498) (164 aa) fasta scores: E(): 5.7e-20, 40.9% FT id in 164 aa" FT /note="Unknown function" FT /db_xref="InterPro:IPR009888" FT /db_xref="UniProtKB/TrEMBL:Q8Z5E0" FT /protein_id="CAD02507.1" FT /translation="MTFIFDVNKEYHAGANLTDKFLCLETYSGLGRYSSDPDYPCQLLS FT IDSDDVCIGHELLQALKNSRTYTPEESEEYLSLEKTQVEYDEWVTVLMAKYNYRTRRAL FT FKNMKYCSIICVNNIIKIQPTRHTKLEGWSWAGHDKDVIRLPVTSEPEKIGSALRQAFE FT CCD" FT CDS complement(142190..142492) FT /transl_table=11 FT /gene="STY2359" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D9" FT /protein_id="CAD02508.1" FT /translation="MKYIIFAFIFLIPLRCMSEKLVFLDEVQTKTMNVAFSHFREHTNW FT GLFNTMIQDDDENIKIAFYCKSHLEEARGGGMEQIIYIISKKDFKIEKINKSYSK" FT RBS complement(142500..142503) FT /note="possible RBS" FT CDS complement(142505..142863) FT /pseudo FT /partial FT /transl_table=11 FT /gene="STY2359a" FT /product="RhsF core protein (pseudogene)" FT /note="Similar to part of Escherichia coli RhsF core FT protein TR:O52668 (EMBL:AF044502) (1394 aa) fasta scores: FT E(): 1.1e-17, 47.9% id in 121 aa" FT CDS complement(142988..143134) FT /pseudo FT /partial FT /transl_table=11 FT /gene="STY2360" FT /product="conserved hypothetical protein (partial CDS)" FT /note="Similar to Escherichia coli H repeat-associated FT protein in rhsC-phrB intergenic region YbfD SW:YBFD_ECOLI FT (P28916) (253 aa) fasta scores: E(): 9.4e-06, 53.7% id in FT 41 aa, and to Escherichia coli H repeat-associated protein FT in rhsB-pit intergenic region YhhI SW:YHHI_ECOLI (P28912) FT (378 aa) fasta scores: E(): 1.3e-05, 53.7% id in 41 aa" FT /db_xref="PSEUDO:CAD02510.1" FT CDS complement(143299..143718) FT /transl_table=11 FT /gene="STY2361" FT /product="putative exported protein" FT /note="Unknown function. Contains probable N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D8" FT /protein_id="CAD02511.1" FT /translation="MGDFIKYLFIFPCLWSANSFAITQTQWDGNFRVEELGEQLNDRSQ FT VFLQYNLKIDSKNNRASLSMTTWHAGITCIGDYSLKINSGVLVLYYNGDEENACPYPSP FT QFEISNKGKEYYIKGKMFSYSQPGEWLPLKRITLK" FT CDS complement(143958..144056) FT /transl_table=11 FT /gene="STY2362" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D7" FT /protein_id="CAD02512.1" FT /translation="MCRFVNQGMAVALFFNEVSSEVELTIADDTQY" FT CDS complement(144153..144350) FT /transl_table=11 FT /gene="STY2363" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D6" FT /protein_id="CAD02513.1" FT /translation="MAAYLYLSAIRMLWHPLNIQNLNKAFPEYETNSLKNKGEITSATC FT IKENTKGHLTYYSVSDPVFN" FT CDS complement(144375..144992) FT /transl_table=11 FT /gene="STY2364" FT /product="putative exported protein" FT /note="Unknown function. Contains probable N-terminal FT signal sequence" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D5" FT /protein_id="CAD02514.1" FT /translation="MMKMSRTAIALSLLGMAAHPVCAAPSFEETARQVIIAFQQRDNAK FT INALIDKKVGMYVLYRIGAGFDYKWMKKFDINKPIPDFNYLLGQVGWFSEHIPVDKEFD FT HHTEVEYVCEKGWDHAGFFVSYTGSDNALLTFSMVNGADSGDQASDTRIANARRLELQS FT ERVVAVPKEWGDGLIFHLSELHGLGKGWSLTLLDLVTEDCSA" FT RBS complement(144996..144999) FT /note="possible RBS" FT CDS 145156..146517 FT /transl_table=11 FT /gene="STY2365" FT /product="putative protease" FT /note="Similar to Proteus mirabilis STM-protease A FT implicated in urinary tract infectivity TR:Q9ZA85 FT (EMBL:AF088981) (334 aa) fasta scores: E(): 1.2e-19, 29.7% FT id in 316 aa" FT /note="Orthologue of E. coli YEGQ_ECOLI; Fasta hit to FT YEGQ_ECOLI (453 aa), 96% identity in 453 aa overlap" FT /db_xref="GOA:Q8XFD2" FT /db_xref="InterPro:IPR001539" FT /db_xref="UniProtKB/TrEMBL:Q8XFD2" FT /protein_id="CAD02515.1" FT /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNH FT ENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLV FT REHFPAMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRQQVPDMEIEI FT FVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDVVGNIVHKHEPIP FT VQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKM FT GVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDPTLLETLEGLAHRGYTEGFLR FT RHTHDDYQNYEYGYSVSERQQFVGEFTGERKGQLAAVAVKNKFSVGDSLELMTPQGNIN FT FTLEQMENAKGDAMPVAPGDGYTVWMPVPQDVTLDYALLMRNFSGESTRNPHAK" FT misc_feature 145378..146190 FT /note="Pfam match to entry PF01136 Peptidase_U32, Peptidase FT family U32, score 622.90, E-value 1.8e-183" FT misc_feature 145639..145695 FT /note="PS01276 Peptidase family U32 signature" FT CDS complement(147158..147574) FT /transl_table=11 FT /gene="STY2366" FT /product="conserved hypothetical protein" FT /note="Similar to proteins of unknown function found FT upstream of eaeA homologues in enteropathogenic Gram -ve FT bacteria e.g. Escherichia coli L0026 TR:AAC31505 FT (EMBL:AF071034) (156 aa) fasta scores: E(): 4e-32, 57.2% id FT in 138 aa, Escherichia coli hypothetical protein in eaeA FT 5'region SW:YEAE_ECOLI (P21244) (156 aa) fasta scores: E(): FT 6.6e-32, 57.2% id in 138 aa and Citrobacter freundii FT hypothetical protein in eaeA 5'region SW:YEAE_CITFR FT (Q07601) (156 aa) fasta scores: E(): 9.2e-32, 56.5% id in FT 138 aa" FT /db_xref="GOA:Q8Z5D4" FT /db_xref="HSSP:1K3E" FT /db_xref="InterPro:IPR010261" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D4" FT /protein_id="CAD02516.1" FT /translation="MYSRADRLLRQFSLKLNADSIAFDENRLCSFIIDNRYRILLTSTN FT SEYIMIYGFCGRPPDNNNLAFEFLNSNLWFAENNGPHLCYDNNSQSLLLALNFSLNESS FT VEKLECEIEVVIRSMENLYHILQDKGINLDTDYT" FT CDS complement(147696..148031) FT /transl_table=11 FT /gene="STY2367" FT /product="putative membrane protein" FT /note="Unknown function. Contains hydrophobic, possible FT membrane-spanning regions" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D3" FT /protein_id="CAD02517.1" FT /translation="MNVTSGVNAQTPLLPPSEWGDDEKPVAEIVEFNAYGNKPRCLMCL FT GTTALFTGAFSGVCSGAVASVSSGAAYTTALTILGASFGMGGIGMMGICAGLYLSANGV FT RTRPAWP" FT RBS complement(148036..148040) FT /note="possible RBS" FT CDS complement(148396..148512) FT /transl_table=11 FT /gene="STY2368" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D2" FT /protein_id="CAD02518.1" FT /translation="MKRCALIALPFFFLLYAAVSEAWFKANGDKRDAGMRIE" FT CDS 148596..149495 FT /pseudo FT /transl_table=11 FT /gene="STY2369" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Similar to Escherichia coli hypothetical protein FT SW:YEGS_ECOLI (P76407; O08008; O08011) (299 aa) fasta FT scores: E(): 0, 85.5% id in 296 aa, Pseudomonas aeruginosa FT conserved hypothetical protein PA3023 TR:AAG06411 FT (EMBL:AE004727) (302 aa) fasta scores: E(): 0, 46.4% id in FT 295 aa and Bacillus subtilis BmrU protein bmrU FT SW:BMRU_BACSU (P39074) (297 aa) fasta scores: E(): 7.8e-14, FT 27.9% id in 301 aa. Start codon is absent. The sequence has FT been checked and is believed to be correct" FT /db_xref="PSEUDO:CAD02519.1" FT CDS complement(149548..150600) FT /transl_table=11 FT /gene="fbaB" FT /gene_synonym="dhnA" FT /gene_synonym="STY2370" FT /product="fructose-bisphosphate aldolase class I" FT /EC_number="4.1.2.13" FT /note="Similar to Escherichia coli fructose-bisphosphate FT aldolase class I FbaB or DhnA SW:ALF1_ECOLI (P71295) (349 FT aa) fasta scores: E(): 0, 96.0% id in 349 aa" FT /note="Orthologue of E. coli ALF1_ECOLI; Fasta hit to FT ALF1_ECOLI (349 aa), 96% identity in 349 aa overlap" FT /db_xref="GOA:Q8XFP7" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q8XFP7" FT /protein_id="CAD02520.1" FT /translation="MTDIAQLLGKDADSLLQHRCMTIPSDQLYLPGKDYVDRVMIDNNR FT PPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPRYFDPKNIVELAIEA FT GCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPTEYDQTLYASVEQAFNMGAVA FT VGATIYFGSEQSRRQIEEISAAFERAHELGMVTVLWAYLRNSSFKKDGVDYHVSADLTG FT QANHLAATIGADIVKQKMAENNGGYKAVNFGYTDDRVYSKLTSDNPIDLVRYQLANCYM FT GRAGLINSGGADGGDTDLGDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQD FT VYLDSKVTIA" FT RBS complement(150608..150611) FT /note="possible RBS" FT CDS 150854..152125 FT /transl_table=11 FT /gene="STY2371" FT /product="putative nucleoside permease" FT /note="Similar to Escherichia coli nucleoside permease NupG FT nupG SW:NUPG_ECOLI (P09452; P76653) (418 aa) fasta scores: FT E(): 0, 31.9% id in 417 aa and Escherichia coli xanthosine FT permease xapB SW:XAPB_ECOLI (P45562; P77729) (418 aa) fasta FT scores: E(): 0, 29.6% id in 419 aa. Contains hydrophobic, FT probable membrane-spanning regions" FT /note="Fasta hit to NUPG_ECOLI (418 aa), 32% identity in FT 417 aa overlap" FT /note="Orthologue of E. coli YEGT_ECOLI; Fasta hit to FT YEGT_ECOLI (425 aa), 95% identity in 425 aa overlap" FT /db_xref="GOA:Q8XEM8" FT /db_xref="InterPro:IPR004740" FT /db_xref="UniProtKB/TrEMBL:Q8XEM8" FT /protein_id="CAD02521.1" FT /translation="MKTTFKLSFMMFVEWFIWGAWFVPLWLWLNKSGFSAGEIGWSYAC FT TAIAAILSPILVGSVTDRFFSAQKVLAVLMFAGAVLMYFAAQQTTFAGFFPLLLAYSLT FT YMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQMLGYNDISPTNIP FT LLITAASSALLGVFAFCLPDTPPKSTGKMDIKVMLGLDALVLLRDKNFLVFFFCSFLFA FT MPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLIT FT AAIRYGFFVYGGAETYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGL FT ITLCCQGFGSLLGYRLGGVMMEKMFAYPQPVNGLTFNWAGMWTFGAVMIAVIALLFMIF FT FRESDKEITAIDDRDIALTQGEVK" FT misc_feature 151256..151288 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS 152113..152118 FT /note="possible RBS" FT CDS 152122..153126 FT /transl_table=11 FT /gene="STY2372" FT /product="putative hydrolase" FT /note="Shows weak similarity to Listeria monocytogenes ADP FT ribosyl glycohydrolase bvrC TR:Q9RLU1 (EMBL:AJ007877) (327 FT aa) fasta scores: E(): 3.3e-30, 33.5% id in 325 aa" FT /note="Orthologue of E. coli YEGU_ECOLI; Fasta hit to FT YEGU_ECOLI (334 aa), 84% identity in 334 aa overlap" FT /db_xref="GOA:Q8Z5D1" FT /db_xref="InterPro:IPR005502" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D1" FT /protein_id="CAD02522.1" FT /translation="MKAERILGALYGQALGDAMGMPSELWPRTRVKAHFGWIDRFLPGP FT KENNAACYFNRAEFTDDTAMALCLADALLECEGNIDPEIIGRNILAWAERFDAFNKNVL FT GPTSKIALNAIRDGKPIAALENNGVTNGAAMRVSPLGCLLPPTNLTAFIAEVALASSPT FT HKSDLAVAGAVVVAWAVSRAVNGDTWQSIADSLPAIAHQAQTARITTFSASLSARLELA FT LNIVRHADGVESASEQLYQIIGAGTSTIESVPCAIAMVELANTDPNRCAVLCANLGGDT FT DTIGAMATAICGALHGVSAINPQLKQTLDKVNQLDFARYAVALASYRQRREAL" FT RBS 153114..153118 FT /note="possible RBS" FT CDS 153123..154088 FT /transl_table=11 FT /gene="STY2373" FT /product="putative sugar kinase" FT /note="Shows weak similarity e.g. to Escherichia coli FT 1-phosphofructokinase SW:K1PF_ECOLI (P23539) (312 aa) fasta FT scores: E(): 4.3e-10, 25.7% id in 300 aa and Escherichia FT coli ribokinase rbsK SW:RBSK_ECOLI (P05054) (309 aa) fasta FT scores: E(): 1.9e-06, 22.3% id in 301 aa" FT /note="Orthologue of E. coli YEGV_ECOLI; Fasta hit to FT YEGV_ECOLI (321 aa), 77% identity in 321 aa overlap" FT /db_xref="GOA:Q8Z5D0" FT /db_xref="HSSP:1LII" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q8Z5D0" FT /protein_id="CAD02523.1" FT /translation="MNGARLLTLLPTLHTRRPLTVIGAAVIDIIADAWTLPRRGGDIEL FT QQQSVNVGGCALNIAVALKRLGIDASNALPLGQGVWAERIRRRLAKEGLSSVIDAVEGD FT NGWCLALVEPDGERTFMSFSGVENQWNADWLSQLRTPRGSLVYLSGYQLASSCGEPLIQ FT WLETVDDVTPFIDFGPRIGDITDDAMARIMACRPIVSLNRQEAIIAAERAGLATDTRTF FT GEAWVKRFSAPLVVRHDKDGAWYFSAQSSGVVPAFPATVVDTIGAGDSHAGGVLAGLAS FT GWSLADAVLLGNAVASWVVGHRGGDCAPTREALLLAHKNV" FT misc_feature 153279..153353 FT /note="PS00583 pfkB family of carbohydrate kinases FT signature 1" FT misc_feature 153840..153944 FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 20.70, E-value 1.4e-05" FT misc_feature 153909..153950 FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2" FT CDS complement(154062..154808) FT /transl_table=11 FT /gene="STY2374" FT /product="putative gntR-family transcriptional regulator" FT /note="Orthologue of E. coli YEGW_ECOLI; Fasta hit to FT YEGW_ECOLI (248 aa), 92% identity in 248 aa overlap" FT /db_xref="GOA:Q8XF22" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q8XF22" FT /protein_id="CAD02524.1" FT /translation="MEQAHTRLIAQLNERISAADNTPLYMKFAQTVKDAVRSGILEHGN FT ILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRARGYGTQINNIFEYSLKEARGFSQQ FT VVLRGKKPDTLWVNKRVVSCPDEVAQHLAIPAGSDVFLLKRIRYVDEDAVSIEESWVPA FT HLIHDVDAIGISLYDYFRRQHIYPQRTRSRVSARMPDDEFQSHIQMDGKVPVLVIKQVA FT LDQQQRPIEYSISYCRSDLYVFVCEE" FT misc_feature complement(154548..154727) FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 66.30, E-value FT 6e-19" FT CDS complement(154844..155644) FT /transl_table=11 FT /gene="thiD" FT /gene_synonym="STY2375" FT /product="phosphomethylpyrimidine kinase" FT /EC_number="2.7.4.7" FT /note="Similar to Salmonella typhimurium LT2 FT phosphomethylpyrimidine kinase SW:THID_SALTY (P55882) (266 FT aa) fasta scores: E(): 0, 99.2% id in 266 aa" FT /note="Orthologue of E. coli THID_ECOLI; Fasta hit to FT THID_ECOLI (266 aa), 91% identity in 266 aa overlap" FT /db_xref="GOA:Q8Z5C9" FT /db_xref="HSSP:1JXH" FT /db_xref="InterPro:IPR013749" FT /db_xref="UniProtKB/TrEMBL:Q8Z5C9" FT /protein_id="CAD02525.1" FT /translation="MQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQN FT TCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRHHVRNVVL FT DTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGR FT ALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAAL FT RPRHRCWGETVNEAKAWLSAALAQADTLEVGKGIGPVHHFHAWW" FT CDS complement(155631..156428) FT /transl_table=11 FT /gene="STY2376" FT /product="hydroxyethylthiazole kinase" FT /EC_number="2.7.1.50" FT /note="Similar to Salmonella typhimurium LT2 FT hydroxyethylthiazole kinase SW:THIM_SALTY (P55883) (265 aa) FT fasta scores: E(): 0, 99.2% id in 265 aa" FT /note="Orthologue of E. coli THIM_ECOLI; Fasta hit to FT THIM_ECOLI (262 aa), 72% identity in 259 aa overlap" FT /db_xref="GOA:Q8Z5C8" FT /db_xref="HSSP:1EKQ" FT /db_xref="InterPro:IPR011144" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5C8" FT /protein_id="CAD02526.1" FT /translation="MQPDLHCRTLAAHTLKHFRALSPLTHCMTNDVVQTFTANTLLALG FT ASPAMVIDPVEARPFAAIANALLINVGTLTASRADAMRAAVESAYDAKTPWTLDPVAVG FT ALEFRRRFCLDLLSLRPAAIRGNASEILALSGMALGGRGVDTTEAALAALPAAQALARQ FT IDCIVVVTGEIDYVTNGQRTLSIPGGDPLMTRIVGTGCALSAVVAASCALPGAALDNVA FT SACCWMKLAGQVAAERSEGPGSFIPAFLDALYHLDMEAANATN" FT RBS complement(155651..155655) FT /note="possible RBS" FT misc_feature complement(155652..156386) FT /note="Pfam match to entry PF02110 HK, Hydroxyethylthiazole FT kinase family, score 513.30, E-value 1.8e-150" FT RBS complement(156436..156440) FT /note="possible RBS" FT RBS 156825..156829 FT /note="possible RBS" FT CDS 156838..157152 FT /transl_table=11 FT /gene="yohN" FT /gene_synonym="STY2377" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli hypothetical protein FT yohN SW:YOHN_ECOLI (P76426) (112 aa) fasta scores: E(): 0, FT 80.9% id in 110 aa" FT /db_xref="UniProtKB/TrEMBL:Q8XGL0" FT /protein_id="CAD02527.1" FT /translation="MKSKLLPCALLLATSFAWAAPATTGIDQYELKSFIADFTHFKPGD FT TVPQMYRTDEYNIKQWKLRNLPAPDAGTHWTYMGGAYVLINDTDGKIIKAYDGEIFYHR FT " FT CDS complement(157414..158421) FT /transl_table=11 FT /gene="stcD" FT /gene_synonym="STY2378" FT /gene_synonym="yehA" FT /product="putative exported protein" FT /note="Orthologue of E. coli yehA (YEHA_ECOLI); Fasta hit FT to YEHA_ECOLI (344 aa), 50% identity in 342 aa overlap. FT Contains possible N-terminal signal sequence" FT /db_xref="InterPro:IPR016959" FT /db_xref="UniProtKB/TrEMBL:Q8Z5C7" FT /protein_id="CAD02528.1" FT /translation="MKLFLFIVMLLILPETYAACTGEITYQDNLIIREDFTINPNQSAT FT YSHNFNDTTCSGTYKITRMDPSDIIVGLYNDTVKLKLKIAWADNNTLTMPFTTGYTVTV FT EPASSGANVNISAGSGNSVLINGVVSITSASSATQFTASLRFLGCLLAGRGWNACAADY FT NSYLRGAGLYSFDLFVSYDRKQTTCKPEDLTITLPNIALSELYNTGKVSNKNAADNIRL FT QCDNLFGNAKQTSRKMTVYLSSSDLIPDSYSVLRGAVNNGVGFILESGGKTVNISNTAE FT QGNASTLWKVDQVGTPLNSDMITIPIIASYYVYDRDNIKPGDLKATALIYVKYD" FT RBS complement(158427..158432) FT /note="possible RBS" FT CDS complement(158437..160926) FT /transl_table=11 FT /gene="stcC" FT /gene_synonym="STY2379" FT /gene_synonym="yehB" FT /product="putative outer membrane usher protein" FT /note="Similar to many e.g. Escherichia coli outer membrane FT usher protein HtrE precursor htrE SW:HTRE_ECOLI (P33129) FT (865 aa) fasta scores: E(): 0, 33.0% id in 854 aa. Contains FT probable N-terminbal signal sequence" FT /note="Fasta hit to YCBS_ECOLI (866 aa), 31% identity in FT 804 aa overlap" FT /note="Fasta hit to FIMD_ECOLI (878 aa), 31% identity in FT 835 aa overlap" FT /note="Fasta hit to HTRE_ECOLI (865 aa), 33% identity in FT 855 aa overlap" FT /note="Fasta hit to SFMD_ECOLI (867 aa), 31% identity in FT 828 aa overlap" FT /note="Orthologue of E. coli yehB (YEHB_ECOLI); Fasta hit FT to YEHB_ECOLI (826 aa), 75% identity in 829 aa overlap" FT /db_xref="GOA:Q8Z5C6" FT /db_xref="InterPro:IPR018030" FT /db_xref="UniProtKB/TrEMBL:Q8Z5C6" FT /protein_id="CAD02529.1" FT /translation="MLRMTPIASLVLLTLFTWQTQAIATETFDTHFMVGGMRDQKITNF FT HLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGA FT TDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRGINAFYTSYYA FT SQYYSDYKNSGSSESTYVRFNSGFNLLGWQAHADTTFNKTDGSSGEWKSNTLYLERGIA FT ELLGTLRAGDQYTSSEIFDSVRFTGVRLFRDMQMLPNSKQNFTPLVQGIAQTNALVTIE FT QNGFVVYQKEVPPGPFSIADLQLAGGGADLDVTVREADGSINTWLVPYASVPNMLQPGV FT SKYDFSAGRSHIEGADNQADFTQISYQYGLNNLLTLYGGTMLSNHYNAFTLGTGWNTRI FT GAISLDATRAHSKQDNGDVFDGQSYQIAYNKYLTQTLTRFGLAAYRYSSQDYRTFNDHV FT WANNKNNYRRDKNDVYDIADYYQNDFGRKNTFSANVSQSLPEGWGAVSLSALWRDYWGR FT SGTSKDYQISYSNTFQKINYTLSASQTYDEDHNEDKRFNLFISIPFDWGDGITTPRRHL FT NVSNSTTFDDDGFTSNNIGLTGTAGSRDQFNYGVNVSHQRHDSETTAGTNLTWNTPVAT FT LNGSYSQSSNYTQTGGSISGGVVAWSGGLNLSSRLSDTFAIMQAPGLEGAYVNGQKYRT FT TNKKGTVVYDNLTPYRENHLMLDVSQSSSETELRGNRKVAAPYRGAVVLVNFDTDQRKP FT WFIKAQRPDGSPLIFGYDVVDHHGHNVGIVGQGSQLFIRTNDIPPEVSVPVDKEQGLSC FT SITFGKTVDESKVYICR" FT misc_feature complement(158470..160851) FT /note="Pfam match to entry PF00577 Usher, Fimbrial Usher FT proteins, score 1069.80, E-value 0" FT misc_feature complement(160021..160053) FT /note="PS01151 Fimbrial biogenesis outer membrane usher FT protein signature" FT RBS complement(160933..160937) FT /note="possible RBS" FT CDS complement(160940..161623) FT /transl_table=11 FT /gene="stcB" FT /gene_synonym="STY2380" FT /gene_synonym="yehC" FT /product="putative fimbrial chaperone protein" FT /note="Similar to many e.g. Klebsiella pneumoniae chaperone FT protein MrkB precursor mrkB SW:MRKB_KLEPN (P21646) (233 aa) FT fasta scores: E(): 6.1e-26, 35.7% id in 235 aa and FT Bordetella pertussis chaperone protein precursor fimB or FT fhaD SW:FIMB_BORPE (P33409) (244 aa) fasta scores: E(): FT 8.7e-23, 33.8% id in 231 aa" FT /note="Fasta hit to YRAI_ECOLI (231 aa), 30% identity in FT 220 aa overlap" FT /note="Fasta hit to ECPD_ECOLI (246 aa), 33% identity in FT 216 aa overlap" FT /note="Fasta hit to YFCS_ECOLI (250 aa), 35% identity in FT 222 aa overlap" FT /note="Orthologue of E. coli yehC (YEHC_ECOLI); Fasta hit FT to YEHC_ECOLI (239 aa), 64% identity in 226 aa overlap" FT /db_xref="GOA:Q8Z5C5" FT /db_xref="HSSP:1P5U" FT /db_xref="InterPro:IPR018046" FT /db_xref="UniProtKB/TrEMBL:Q8Z5C5" FT /protein_id="CAD02530.1" FT /translation="MKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGE FT QASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVAAESGQQIKIKKMPNSLPDNKESLF FT YLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIM FT KNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISS FT KINVK" FT misc_feature complement(160973..161551) FT /note="Pfam match to entry PF00345 pili_assembly, FT Gram-negative pili assembly chaperone, score 257.70, FT E-value 4.4e-75" FT misc_feature complement(161285..161338) FT /note="PS00635 Gram-negative pili assembly chaperone FT signature" FT CDS complement(161679..162209) FT /transl_table=11 FT /gene="stcA" FT /gene_synonym="STY2381" FT /gene_synonym="yehD" FT /product="putative fimbrial subunit protein" FT /note="Shows very weak similarity to e.g. Klebsiella FT pneumoniae fimbrial subunit type 1 precursor fim FT SW:FM12_KLEPN (P12903) (182 aa) fasta scores: E(): 0.11, FT 26.5% id in 189 aa. Contains probable N-terminal signal FT sequence" FT /note="Orthologue of E. coli yehD (YEHD_ECOLI); Fasta hit FT to YEHD_ECOLI (180 aa), 32% identity in 182 aa overlap" FT /db_xref="GOA:Q8XGE9" FT /db_xref="InterPro:IPR014779" FT /db_xref="UniProtKB/TrEMBL:Q8XGE9" FT /protein_id="CAD02531.1" FT /translation="MKRSLIAASVLSAVFMSAGAFAVDEYDSGVLNINGKVVGTTCQFL FT GTNTAEIRLNEIGADKIINLTPGQIYDAVTNQTQMPLKIKCQQGVAPRITFSSTQFDSH FT DITFNNGSAKGVGFAVYYGSTDNQIDPETGVTLDPNSSGEYDLTFLARYARLDGDVASG FT DVSSTLTLTVVTD" FT misc_feature complement(161682..162125) FT /note="Pfam match to entry PF00419 Fimbrial, Fimbrial FT proteins, score -32.00, E-value 0.012" FT CDS complement(162488..162769) FT /transl_table=11 FT /gene="STY2382" FT /gene_synonym="yehE" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yehE (YEHE_ECOLI); Fasta hit FT to YEHE_ECOLI (93 aa), 49% identity in 94 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8XFD6" FT /protein_id="CAD02532.1" FT /translation="MKKYLLMGIIVSAYGISVPVFASDTATLTISGKVTAPTCSTEVVN FT AQLQQRCGNTIHVSTLQTPAATPMRGVTTQLYTVPGDSTRQIVVNHYD" FT RBS complement(162784..162787) FT /note="possible RBS" FT CDS complement(163047..164156) FT /transl_table=11 FT /gene="STY2383" FT /gene_synonym="mrp" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli mrp (MRP_ECOLI); Fasta hit to FT MRP_ECOLI (379 aa), 96% identity in 369 aa overlap. Note FT missing N-terminal 10 amnio acids with respect to mrp" FT /db_xref="GOA:Q8Z5C4" FT /db_xref="InterPro:IPR019591" FT /db_xref="UniProtKB/TrEMBL:Q8Z5C4" FT /protein_id="CAD02533.1" FT /translation="MNEQSQAKSPDTLRAMVAGTLANFQHPTLKHNLTTLKALHHVAWM FT DDTLHVELVMPFVWNSAFEVLKEQCSADLLRITGAKAIDWKLSYNIATLKRVKNQPGIN FT GVKNIIAVSSGKGGVGKSSTAVNLALALEAEGAKVGVLDADIYGPSIPTMLGAEDQRPT FT SPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLD FT MPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSMH FT ICSNCGHHEPIFGTGGAQKLAEKYHTQLLGQMPLHISLREDLDRGTPTVVSRPESEFTA FT IYRELADRVAAQLYWQGEVIPGEIAFRAV" FT misc_feature complement(163470..163520) FT /note="PS01215 Mrp family signature" FT misc_feature complement(163791..163814) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT RBS complement(164162..164167) FT /note="possible RBS" FT misc_feature 164321..165610 FT /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA FT synthetases class I (I, L, M and V), score -234.70, E-value FT 2e-05" FT CDS 164321..166354 FT /transl_table=11 FT /gene="metG" FT /gene_synonym="STY2384" FT /product="methionyl-tRNA synthetase" FT /EC_number="6.1.1.10" FT /note="Similar to Escherichia coli methionyl-tRNA FT synthetase metG SW:SYM_ECOLI (P00959) (676 aa) fasta FT scores: E(): 0, 95.3% id in 676 aa" FT /db_xref="GOA:Q8Z5C3" FT /db_xref="HSSP:1F4L" FT /db_xref="InterPro:IPR002547" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5C3" FT /protein_id="CAD02534.1" FT /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHE FT VNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENR FT ELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCG FT ATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEW FT FESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEY FT WKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGT FT FIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAG FT FINKRFDGVLAAELADPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDE FT QAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPTLSERVEAFLNSELNWDAIE FT QPLLSHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAPVTGPLADFPIQETITFDDF FT AKIDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALIGRQTVMVA FT NLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK" FT misc_feature 164363..164398 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature" FT misc_feature 166061..166345 FT /note="Pfam match to entry PF01588 tRNA_bind, Putative tRNA FT binding domain, score 143.50, E-value 3.7e-39" FT CDS 166595..167053 FT /transl_table=11 FT /gene="STY2385" FT /gene_synonym="yehR" FT /product="putative lipoprotein" FT /note="Similar to Listeria monocytogenes hypothetical FT lipoprotein SW:YORZ_LISMO (P33385) (153 aa) fasta scores: FT E(): 3.7e-21, 42.7% id in 150 aa. Contains probable FT N-terminal signal sequence" FT /note="Orthologue of E. coli yehR (YEHR_ECOLI); Fasta hit FT to YEHR_ECOLI (153 aa), 73% identity in 153 aa overlap" FT /db_xref="InterPro:IPR009736" FT /db_xref="UniProtKB/TrEMBL:Q8XF10" FT /protein_id="CAD02535.1" FT /translation="MKISGKLLSAALASVLVFSLAGCGDKEESKTFNANLAGTEISITY FT TYKGDKIIKQTSESKISYATVGAKTKEDAAKILDPLSAKYKNIAGVEEKLTYEDTYAQE FT NVSVDMEKVDFKALQQISGTMVSGDTSKGISMKQTQTLLEAAGFKEAK" FT misc_feature 166631..166663 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT RBS 167214..167218 FT /note="possible RBS" FT CDS 167225..167755 FT /transl_table=11 FT /gene="STY2386" FT /product="putative lipoprotein" FT /note="Similar to Listeria monocytogenes hypothetical FT lipoprotein SW:YORZ_LISMO (P33385) (153 aa) fasta scores: FT E(): 7.6e-16, 38.3% id in 133 aa and Escherichia coli FT hypothetical lipoprotein SW:YEHR_ECOLI (P33354) (153 aa) FT fasta scores: E(): 1.3e-11, 30.9% id in 139 aa. Contains FT probable N-terminal signal sequence" FT /db_xref="InterPro:IPR009736" FT /db_xref="UniProtKB/TrEMBL:Q8Z5C2" FT /protein_id="CAD02536.1" FT /translation="MQVLRLMALPLFALSLSVSITGCDQKNDTLQGKQNNMTAFIKKIA FT ASKESEETQRYVGNLNGIEIKLTYYYKGDIVLRQISEHKLLYKTLKANNKEEAQKMLSQ FT VGEAYQGMPGLTERIDYYDSYATEYVDIDFTQAKISDLCKLPGSSIDNCSAYYLSMIRS FT QKLLEESGYHRIN" FT misc_feature 167261..167293 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS complement(167812..168279) FT /transl_table=11 FT /gene="STY2387" FT /gene_synonym="yehS" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yehS (YEHS_ECOLI); Fasta hit FT to YEHS_ECOLI (156 aa), 90% identity in 155 aa overlap" FT /db_xref="InterPro:IPR009921" FT /db_xref="UniProtKB/TrEMBL:Q7AMQ5" FT /protein_id="CAD02537.1" FT /translation="MLSNDILRSVRYILKANNTDLARILALGNVDATPEQIAIWLRKEE FT EEGFQRCPDIVLSSFLNGLIYEKRGKDEAAPALTAERRINNNIVLKKLRIAFSLKTDDI FT LAILTGQLFRVSMPEITAMMRAPDHKNFRECGDQFMRYFLRGLAAREHAAK" FT CDS complement(168326..169045) FT /transl_table=11 FT /gene="STY2388" FT /gene_synonym="yehT" FT /product="putative two-component system response regulator" FT /note="Similar to many response regulators e.g. Pseudomonas FT aeruginosa positive alginate biosynthesis regulatory FT protein algR SW:ALGR_PSEAE (P26275) (248 aa) fasta scores: FT E(): 5.7e-16, 30.5% id in 243 aa" FT /note="Fasta hit to P77742 (244 aa), 31% identity in 246 aa FT overlap" FT /note="Orthologue of E. coli yehT (YEHT_ECOLI); Fasta hit FT to YEHT_ECOLI (244 aa), 94% identity in 239 aa overlap" FT /db_xref="GOA:Q8Z5C1" FT /db_xref="HSSP:1DZ3" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5C1" FT /protein_id="CAD02538.1" FT /translation="MIKVLIVDDEPLARENLRILLQGQDDIEIVGECANAVEAIGAVHK FT LRPDVLFLDIQMPRISGLEIVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIE FT EKRLEKTLHRLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMDDVAFVSSRMSGV FT YVTSSEGKEGFTELTLRTLESRTPLLRCHRQFLVNMAHLQEIRLEDNGQAELILRNGLT FT VPVSRRYLKSLKEAIGL" FT misc_feature complement(168710..169042) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 136.90, E-value 3.5e-37" FT CDS complement(169042..170727) FT /transl_table=11 FT /gene="STY2389" FT /gene_synonym="yehU" FT /product="putative two-component system sensor kinase" FT /note="Orthologue of E. coli yehU (YEHU_ECOLI); Fasta hit FT to YEHU_ECOLI (561 aa), 92% identity in 561 aa overlap" FT /db_xref="GOA:Q8Z5C0" FT /db_xref="InterPro:IPR010559" FT /db_xref="UniProtKB/TrEMBL:Q8Z5C0" FT /protein_id="CAD02539.1" FT /translation="MYEFNLVLLLLQQMCVFLVIAWLMSKTRLFIPLMQVTVRLPHKLL FT CYVMFSIFCIMGTYFGLHIEDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGG FT MTALSCMISTIVEGLLGGLVHSVLIRRGRPDKVFSPLTAGAITCVAELVQMLIILLIAR FT PFDDALHLVSNIAAPMMMTNTVGAALFMRILLDKRAMFEKYTSAFSVTALKVAASTEGI FT LRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSGYTLKA FT IETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSIN FT RTLGEGIAQLLSAQILAGQYERQKALLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDS FT EQASQLVQYLSTFFRKNLKRPSEIVTLADEIEHVNAYLQIEKARFQSRLQVQLDVPSTL FT SRQKLPAFTLQPIVENAIKHGTSQLLDTGNVAIRARREGQHLMLDIEDNAGLYQPSAGS FT SGLGMSLVDKRLREHFGDDYGISVACEPDCFTRITLRLPLEEDA" FT RBS complement(169050..169055) FT /note="possible RBS" FT misc_feature complement(169060..169623) FT /note="Pfam match to entry PF00512 signal, Histidine FT kinase, score -38.70, E-value 0.0062" FT misc_feature complement(169648..170076) FT /note="Pfam match to entry PF01590 GAF, GAF domain, score FT 44.20, E-value 3e-09" FT CDS 170950..171681 FT /transl_table=11 FT /gene="STY2390" FT /gene_synonym="yehV" FT /product="putative transcriptional regulator" FT /note="Fasta hit to YCGE_ECOLI (243 aa), 47% identity in FT 238 aa overlap" FT /note="Orthologue of E. coli yehV (YEHV_ECOLI); Fasta hit FT to YEHV_ECOLI (243 aa), 85% identity in 243 aa overlap" FT /db_xref="GOA:Q8Z5B9" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B9" FT /protein_id="CAD02540.1" FT /translation="MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDA FT DIDRIREIKRWIDNGVQVSKVKVLLSSDSSEQPNGWREQQEILLHYLQSSNLHSLRLWV FT KERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYIALCLASARKKQGK FT DALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLSQFRPELFDGKTLLVWCGEHQTL FT AQQQQLLAWRAQGHDIHPLGV" FT misc_feature 170968..171039 FT /note="PS00552 Bacterial regulatory proteins, merR family FT signature" FT misc_feature 170968..171075 FT /note="Pfam match to entry PF00376 merR, Bacterial FT regulatory proteins, merR family, score 59.30, E-value FT 8.3e-14" FT RBS 171728..171734 FT /note="possible RBS" FT CDS 171741..171848 FT /transl_table=11 FT /gene="STY2391" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="GOA:Q8XFT0" FT /db_xref="UniProtKB/Swiss-Prot:Q8XFT0" FT /protein_id="CAD02541.1" FT /translation="MRVAKIGVIALFLLMAIGGIGGVMLAGYSFILRAG" FT CDS complement(171829..172560) FT /transl_table=11 FT /gene="STY2392" FT /gene_synonym="yehW" FT /product="putative permease transmembrane component" FT /note="Similar to e.g. Bacillus subtilis choline transport FT system permease protein opuBB or proW SW:OPBB_BACSU FT (Q45461; O34670) (217 aa) fasta scores: E(): 5.9e-20, 42.2% FT id in 187 aa. Contains hydrophobic, probable FT membrane-spanning regions" FT /note="Orthologue of E. coli yehW (YEHW_ECOLI); Fasta hit FT to YEHW_ECOLI (243 aa), 85% identity in 243 aa overlap" FT /db_xref="GOA:Q8Z5B8" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B8" FT /protein_id="CAD02542.1" FT /translation="MKRLCDPLLWLIVLFLLLLFGLPYSQPFFAALFPDLPRPVYQQES FT FAALALAHFWLVGISSLFAVVVGVGAGIAVTRESGKEFRPLVETIAAVGQTFPPVAVLA FT IAVPVMGFGQQPAIIALILYGVLPILQATLAGLGAVPASVMSVASGMGMSRRQQLYQVE FT LPLAAPVILAGIRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVAL FT AAIIIDRLFERLTRALTRHAK" FT misc_feature complement(171925..172155) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 65.40, E-value 1.2e-15" FT CDS complement(172544..173491) FT /transl_table=11 FT /gene="STY2393" FT /gene_synonym="yehX" FT /product="ABC transporter ATP-binding protein" FT /note="Similar to e.g. Bacillus subtilis choline transport FT ATP-binding protein opuBA or proV SW:OPBA_BACSU (Q45460; FT O34332) (381 aa) fasta scores: E(): 0, 45.3% id in 296 aa" FT /note="Fasta hit to AFUC_ECOLI (348 aa), 32% identity in FT 297 aa overlap" FT /note="Orthologue of E. coli yehX (YEHX_ECOLI); Fasta hit FT to YEHX_ECOLI (308 aa), 88% identity in 307 aa overlap" FT /db_xref="GOA:Q8XER9" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8XER9" FT /protein_id="CAD02543.1" FT /translation="MIEFNHVSKTFGDQQAVSDLNLHFSEGSFSVLIGTSGSGKSTTLK FT MINRLVEHDSGTIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWTVAQNIATVPQLQK FT WSRARINDRIDELMALLGLESALRDRYPHQLSGGQQQRVGVARALAADPQVLLMDEPFG FT ALDPVTRGALQQEMTRIHQLLGRTIVLVTHDIDEALRLADHLVLMDGGHVIQQGSPLSM FT LTSPENDFVQAFFGRSELGVRLLSLRSVGDYVRRHEQLSGDALVEEMTLRDALSMFVAR FT RCDVLPVANQQGEPCGTLHFRDLLSETSPRETTV" FT RBS complement(172571..172574) FT /note="possible RBS" FT misc_feature complement(172859..173413) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 214.80, E-value 1.3e-60" FT misc_feature complement(173045..173089) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(173369..173392) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(173484..174653) FT /transl_table=11 FT /gene="STY2394" FT /gene_synonym="yehY" FT /product="putative permease transmembrane component" FT /note="C-terminal half is similar to e.g. Bacillus subtilis FT choline transport system permease protein opuBB or proW FT SW:OPBB_BACSU (Q45461; O34670) (217 aa) fasta scores: E(): FT 4e-13, 32.5% id in 191 aa. Contains hydrophobic, probable FT membrane-spanning regions" FT /note="Orthologue of E. coli yehY (YEHY_ECOLI); Fasta hit FT to YEHY_ECOLI (385 aa), 76% identity in 380 aa overlap" FT /db_xref="GOA:Q8Z5B7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B7" FT /protein_id="CAD02544.1" FT /translation="MSDAAKKITVNRVLLLLVVLALLAVALPFINYAPNRLVSGEGRQL FT WEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLMMAQTLFIVMLWGVGRAATQLAQEG FT SPLARTSLGSGLWLGLGLMLLACSDAIRRITVGPLWRWLLHAQIVIVPLVLLFSGTFDN FT LSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNV FT IQTIPSVALFGLLIAPLAGLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGVVAG FT LNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIGAG FT GFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDALFDLWIAFLKGATDD" FT RBS complement(173498..173501) FT /note="possible RBS" FT misc_feature complement(173601..173813) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 73.70, E-value 4e-18" FT misc_feature complement(173724..173810) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS complement(174657..175574) FT /transl_table=11 FT /gene="STY2395" FT /gene_synonym="yehZ" FT /product="putative periplasmic protein" FT /note="Similar to e.g. Deinococcus radiodurans ABC FT transporter, periplasmic substrate-binding protein, FT putative DRA0135 TR:Q9RZ18 (EMBL:AE001862) (369 aa) fasta FT scores: E(): 0, 51.7% id in 296 aa and Streptomyces FT coelicolor probable permease binding protein proXL or FT SCE19A.33 TR:Q9X4J2 (EMBL:AF112365) (322 aa) fasta scores: FT E(): 1.3e-22, 31.4% id in 287 aa. Contains probable FT N-terminal signal sequence" FT /note="Orthologue of E. coli yehZ (YEHZ_ECOLI); Fasta hit FT to YEHZ_ECOLI (305 aa), 88% identity in 305 aa overlap" FT /db_xref="GOA:Q8Z5B6" FT /db_xref="InterPro:IPR007210" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B6" FT /protein_id="CAD02545.1" FT /translation="MTISKLWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNMIL FT QVLESHGVKTVNKIQLGTTPVVRGAITAGELDIYPEYTGNGAFFFKDENDPAWKNAKQG FT FEKVKKLDAEQNKLVWLTPAPANNTWTIAIRQDIAEKNKLSSLADLSRYLKEGGTFKLA FT ASAEFIERSDALPAFEKAYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTD FT GPVAALGLQTLSDPKGVQPIYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTLQQLNA FT RIAVEGLDAKKVAADYLRQKGWVK" FT RBS complement(175583..175586) FT /note="possible RBS" FT CDS complement(175756..178053) FT /transl_table=11 FT /gene="STY2396" FT /gene_synonym="bglX" FT /product="periplasmic beta-glucosidase precursor" FT /EC_number="3.2.1.21" FT /note="Similar to Salmonella typhimurium periplasmic FT beta-glucosidase precursor SW:BGLX_SALTY (Q56078) (765 aa) FT fasta scores: E(): 0, 99.0% id in 765 aa. Contains probable FT N-terminal signal sequence" FT /note="Orthologue of E. coli bglX (BGLX_ECOLI); Fasta hit FT to BGLX_ECOLI (765 aa), 93% identity in 765 aa overlap" FT /db_xref="GOA:Q8Z5B5" FT /db_xref="HSSP:1EX1" FT /db_xref="InterPro:IPR019800" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B5" FT /protein_id="CAD02546.1" FT /translation="MKWLCSVGVAVSLAMQPALAENLFGNHPLTPEARDAFVTDLLKKM FT TVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRQMQDQVMALSRLKI FT PLFFAYDVVHGQRTVFPISLGLASSFNLDAVRTVGRVSAYEAADDGLNMTWAPMVDVSR FT DPRWGRASEGFGEDTYLTSIMGETMVKAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEY FT NTVDMSSQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDEWGFK FT GITVSDHGAIKELIKHGTAADPEDAVRVALKAGVDMSMADEYYSKYLPGLIKSGKVTMA FT ELDDATRHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESVVLLK FT NRLETLPLKKSGTIAVVGPLADSQRDVMGSWSAAGVANQSVTVLAGIQNAVGDGAKILY FT AKGANITNDKDIVDFLNLYEEAVKIDPRSPQAMIDEAVQAAKQADVVVAVVGESQGMAH FT EASSRTNITIPQSQRDLITALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTE FT GGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNPEKPNKYTSRYFDEA FT NGPLYPFGYGLSYTTFTVSDVTLSSPTMQRDGKVTASVEVTNTGKREGETVIQMYLQDV FT TASMSRPVKQLKGFEKITLKPGERKTVSFPIDIEALKFWNQQMKYDAEPGKFNVFIGVD FT SARVKQGSFELL" FT misc_feature complement(176338..176925) FT /note="Pfam match to entry PF01915 Glyco_hydro_3_C, FT Glycosyl hydrolase family 3 C terminal domain, score FT 210.10, E-value 3.4e-59" FT misc_feature complement(177049..177954) FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 395.50, E-value FT 5e-115" FT misc_feature complement(177184..177237) FT /note="PS00775 Glycosyl hydrolases family 3 active site" FT RBS 178308..178313 FT /note="possible RBS" FT CDS 178320..180050 FT /transl_table=11 FT /gene="STY2397" FT /gene_synonym="dld" FT /product="D-lactate dehydrogenase" FT /EC_number="1.1.1.28" FT /note="Orthologue of E. coli dld (DLD_ECOLI); Fasta hit to FT DLD_ECOLI (570 aa), 92% identity in 568 aa overlap" FT /db_xref="GOA:Q8Z5B4" FT /db_xref="HSSP:1F0X" FT /db_xref="InterPro:IPR016173" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B4" FT /protein_id="CAD02547.1" FT /translation="MSSITMTDNKTFLNELARLVGHSHLLTDPAKTARYRKGFRSGQGD FT ALAVVFPGSLLELWRVLNACVNADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTQRL FT DKLHLLDNGQQVLAWPGTTLYALEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSL FT VQRGPAYTEMSLFARIDEQGKLQLVNHLGIDLGHTPEQILSKLDDERIKDEDVRHDGRH FT AHDHDYVTRVRDINADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFAAEKNQQVFYI FT GTNQPAVLTEIRRHILANFDNLPVAGEYMHRDIYDIAEQYGKDTFLMIDKLGTDKMPFF FT FTLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGD FT GVAEAQRWLNEFFKSAEGGFFTCTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDILAL FT DIALRRNDTDWFEHLPPEIDSQLVHKLYYGHFMCHVFHQDYIVKKGVDVHALKAQMLEL FT LQARGAQYPAEHNVGHLYKAPETLTRFYRQNDPTNSMNPGIGKTSKRKFWQENTPDETH FT " FT misc_feature 178359..178991 FT /note="Pfam match to entry PF01565 FAD_binding_4, FAD FT binding domain, score 163.00, E-value 5.1e-45" FT CDS complement(180109..181056) FT /pseudo FT /transl_table=11 FT /gene="STY2398" FT /gene_synonym="pbpG" FT /product="penicillin-binding protein (pseudogene)" FT /EC_number="3.4.99.-" FT /note="Orthologue of E. coli pbpG (PBP7_ECOLI); Fasta hit FT to PBP7_ECOLI (313 aa), 93% identity in 302 aa overlap. FT Appears to have lost its start codon (with respect to E. FT coli pbpG) and contains a UGA stop codon. However there is FT an alternative start codon (used here) and possible FT translational read-through at codon 5 (UGA, followed 3' by FT G). This would result in a non-conservative substitution of FT W (compared to R in E. coli), but would retain a good FT predicted N-terminal signal sequence. The sequence has been FT checked and is believed to be correct" FT misc_feature complement(180208..180975) FT /note="Pfam match to entry PF00768 Peptidase_S11, FT D-alanyl-D-alanine carboxypeptidase, score 414.60, E-value FT 9e-121" FT CDS complement(181222..181809) FT /transl_table=11 FT /gene="STY2399" FT /gene_synonym="yohC" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yohC (YOHC_ECOLI); Fasta hit FT to YOHC_ECOLI (195 aa), 92% identity in 195 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="InterPro:IPR009698" FT /db_xref="UniProtKB/TrEMBL:Q8XF36" FT /protein_id="CAD02549.1" FT /translation="MNHVWGLFSHPDREMQVIKSENETVSHHYTHHVLLMAAIPVVCAF FT IGTTQIGWNFGDGNVLQLSLFTAFALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLA FT RCMVFAGYVATPLFLSGLVALYPLVWLCALVGAVALFYTGYLLYLGIPTFLNINREEGL FT SFSSSTLAIGVLVLEVLLAITVILWGYGYRLF" FT CDS 181941..182537 FT /transl_table=11 FT /gene="STY2400" FT /gene_synonym="yohD" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yohD (YOHD_ECOLI); Fasta hit FT to YOHD_ECOLI (192 aa), 81% identity in 185 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:Q8XFM0" FT /protein_id="CAD02550.1" FT /translation="MLNAGGGLRMDINTLITHYGYAALVIGSMAEGETVTLLGGVAAHQ FT GLLKFPLVAAAVALGGMMGDQLLYLLGRCYGGKILRRFPRYHTKIRRAQKMIQRHPYLF FT VIGTRFMYGFRVVGPLLIGASRLPPKIFLPLNIVGALIWALLFTTLGYLGGEVIAPWLH FT DLDQHLRHGVWLILAIVLVVGVRWWLKRRGKAEAR" FT misc_feature 181965..182450 FT /note="Pfam match to entry PF00597 DedA, DedA family, score FT 151.00, E-value 2.1e-41" FT CDS complement(182585..183346) FT /transl_table=11 FT /gene="STY2401" FT /gene_synonym="yohF" FT /product="putative oxidoreductase" FT /note="Similar to oxidoreductases e.g. Bacillus subtilis FT 3-oxoacyl-[acyl-carrier protein] reductase fabG FT SW:FABG_BACSU (P51831; O31733) (246 aa) fasta scores: E(): FT 1.8e-28, 37.3% id in 244 aa" FT /note="Fasta hit to YGHA_ECOLI (294 aa), 31% identity in FT 246 aa overlap" FT /note="Fasta hit to FABG_ECOLI (244 aa), 34% identity in FT 244 aa overlap" FT /note="Fasta hit to YGCW_ECOLI (261 aa), 34% identity in FT 245 aa overlap" FT /note="Fasta hit to YGFF_ECOLI (247 aa), 33% identity in FT 247 aa overlap" FT /note="Fasta hit to UCPA_ECOLI (285 aa), 31% identity in FT 252 aa overlap" FT /note="Fasta hit to KDUD_ECOLI (253 aa), 34% identity in FT 246 aa overlap" FT /note="Fasta hit to IDNO_ECOLI (254 aa), 33% identity in FT 246 aa overlap" FT /note="Fasta hit to ENTA_ECOLI (248 aa), 32% identity in FT 250 aa overlap" FT /note="Fasta hit to HDHA_ECOLI (255 aa), 35% identity in FT 244 aa overlap" FT /note="Orthologue of E. coli yohF (YOHF_ECOLI); Fasta hit FT to YOHF_ECOLI (253 aa), 80% identity in 251 aa overlap" FT /db_xref="GOA:Q8Z5B3" FT /db_xref="HSSP:1AE1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B3" FT /protein_id="CAD02551.1" FT /translation="MTKVAIVTASDSGIGKACALLLAQNGFDIGITWHSDERGAQETAK FT KAAQFGVRAETIHLDLSQLPEGAQAIEHLIQRLGRVDVLVNNAGAMTKSAFIDMPFTQW FT RQIFTVDVDGAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAYTAAKHALGGL FT TKSMALELIEHHILVNAVAPGAIATPMNDMDDSDIKPGSEPSIPIARPGSTHEIASLVA FT WLCSEGASYTTGQSLIVDGGFMLVNPQFNAK" FT misc_feature complement(182630..182722) FT /note="Pfam match to entry PF00678 adh_short_C2, Short FT chain dehydrogenase/reductase C-terminus, score 50.50, FT E-value 1.1e-12" FT misc_feature complement(182780..183340) FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 232.00, E-value 8.7e-66" FT misc_feature complement(182843..182929) FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature" FT RBS complement(183350..183354) FT /note="possible RBS" FT CDS complement(183412..184848) FT /transl_table=11 FT /gene="STY2402" FT /gene_synonym="yohG" FT /product="putative lipoprotein" FT /note="Shows weak similarity to e.g. Pseudomonas aeruginosa FT outer membrane protein OprM precursor oprM or oprK FT SW:OPRM_PSEAE (Q51487; Q51444) (477 aa) fasta scores: E(): FT 7.1e-20, 25.5% id in 491 aa. Contains probable N-terminal FT signal sequence" FT /note="Fasta hit to YJCP_ECOLI (488 aa), 37% identity in FT 488 aa overlap" FT /note="Orthologue of E. coli yohG (YOHG_ECOLI); Fasta hit FT to YOHG_ECOLI (398 aa), 85% identity in 396 aa overlap" FT /db_xref="GOA:Q8XGU6" FT /db_xref="InterPro:IPR010131" FT /db_xref="UniProtKB/TrEMBL:Q8XGU6" FT /protein_id="CAD02552.1" FT /translation="MNRNSFLAATASLPLFILLAGCAPMHDTRQSLTQQTPSSHVDSSL FT PAALKNGWPDSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGP FT QLDFSADIERQRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEV FT TARIGAVKAREAEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVAVNREL FT YQHGITSSVEGVETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQVSLPA FT VESQLPSQLGYSLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLS FT DLFRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAA FT SQVETLAQKNQHQQQIEHDAQRVVGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQ FT GQWLDASIQLTSALGGGYHS" FT misc_feature complement(184783..184815) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT CDS 185039..185236 FT /transl_table=11 FT /gene="STY2403" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8XGW4" FT /protein_id="CAD02553.1" FT /translation="MNDFAAIRASSLHELNVAAPNKAADGLILSYTLFVFTNKGTNNEN FT SSMGNLNYFSDWAVGGNGRV" FT CDS complement(185307..186245) FT /transl_table=11 FT /gene="STY2404" FT /gene_synonym="yohI" FT /product="conserved hypothetical protein" FT /note="Similar to e.g. Rhodobacter capsulatus nitrogen FT regulation protein Nifr3 nifr3 SW:NIR3_RHOCA (Q08111) (324 FT aa) fasta scores: E(): 1.8e-23, 32.7% id in 327 aa" FT /note="Fasta hit to YHDG_ECOLI (321 aa), 31% identity in FT 319 aa overlap" FT /note="Orthologue of E. coli yohI (YOHI_ECOLI); Fasta hit FT to YOHI_ECOLI (315 aa), 89% identity in 312 aa overlap" FT /db_xref="GOA:Q8Z5B2" FT /db_xref="InterPro:IPR018517" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5B2" FT /protein_id="CAD02554.1" FT /translation="MRVLLAPMEGVLDALVRELLTEVNDYDLCITEFVRVVDQLLPVKV FT FHRICPELLHASRTPSGTPVRIQLLGQHPQWLAENAARATALGSYGVDLNCGCPSKVVN FT GSGGGATLLTDPELIYQGAKAMRAAVPSHLPVTVKVRLGWDSGDRKFEIADAVQQAGAS FT ELVVHGRTKAQGYRAEHIDWQAIGEIRQRLTIPVIANGEIWDWQSAQACMATSGCDAVM FT IGRGALNIPNLSRVVKYNEPRMPWPEVVTLLQKYTRLEKQGDTGLYHVARIKQWLGYLR FT KEYIEATELFQSIRALNRSSEIARVIQAIKI" FT misc_feature complement(185322..186236) FT /note="Pfam match to entry PF01207 UPF0034, Uncharacterized FT protein family UPF0034, score 448.40, E-value 6e-131" FT misc_feature complement(185916..185972) FT /note="PS01136 Uncharacterized protein family UPF0034 FT signature" FT CDS complement(186354..187547) FT /transl_table=11 FT /gene="STY2405" FT /product="putative n-hydroxybenzoate hydroxylase" FT /note="Similar to hydroxylases/monooxygenases e.g. FT Pseudomonas stutzeri salicylate hydroxylase nahW TR:Q9ZI64 FT (EMBL:AF039534) (389 aa) fasta scores: E(): 9.9e-29, 28.9% FT id in 387 aa overlap. Similar to Bordetella pertussis FT hypothetical protein TR:O30447 (EMBL:AF006000) (406 aa) FT fasta scores: E(): 0, 33.2% id in 398 aa. May produce FT gentisate, given presence of putative gentisate FT 1,2-dioxygenase upstream" FT /db_xref="GOA:Q8Z5B1" FT /db_xref="InterPro:IPR003042" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B1" FT /protein_id="CAD02555.1" FT /translation="MTHVTSAIIVGGGIGGAATALSLARQGIKVMLLEKAHEIGEIGAG FT IQLGPNAFSALDSLGVGDVARQRAVFTDHITMMDAVNAEEVVRIETGQAFRDHFGGPYA FT VIHRVDIHATVWEAVLTHPGVEYRTSTHIVDIRQTPDDVTVFDEQGNSWTADILVGCDG FT VKSVVRQSLLGDAPRVTGHVVYRAVIDCDDMPDDLRINAPVLWAGPHCHLVHYPLRGGQ FT QYNLVVTFHSRQQEEWGVKDGSKEEVLSYFAGIHPRPRQMLDKPTSWRRWSTADREPVA FT KWGTERITLVGDAAHPVAQYMAQGACMALEDAVTLGKALERCDGDAQQAFALYESVRIP FT RTARIVWSTREMGRLYHAAGVERQVRNLLWKGKSQEAFYRGIEWLYGWKEDNCLEPR" FT misc_feature complement(186498..187088) FT /note="Pfam match to entry PF01360 Monooxygenase, FT Monooxygenase, score 127.70, E-value 2.2e-34" FT misc_feature complement(187107..187529) FT /note="Pfam match to entry PF01494 FAD_binding_3, FAD FT binding domain, score -3.20, E-value 0.00091" FT RBS complement(187555..187560) FT /note="possible RBS" FT CDS complement(187562..188206) FT /transl_table=11 FT /gene="STY2406" FT /product="glutathione-S-transferase-family protein" FT /note="Similar to e.g. Pseudomonas sp. U2 FT glutathione-S-transferase homolog from plasmid pWWU2 nagL FT TR:O86043 (EMBL:AF081362) (212 aa) fasta scores: E(): FT 2.4e-28, 42.1% id in 214 aa and Homo sapiens FT maleylacetoacetate isomerase gstz1 or maaI SW:MAAI_HUMAN FT (O43708; O15308; O75430) (216 aa) fasta scores: E(): FT 1.7e-24, 40.8% id in 211 aa. May be maleylpyruvate FT isomerase, given the presence of a putative gentisate FT 1,2-dioxygenase upstream" FT /db_xref="GOA:Q8Z5B0" FT /db_xref="HSSP:1FW1" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q8Z5B0" FT /protein_id="CAD02556.1" FT /translation="MKLYSFFNSSASYRVRIALALKGIDYQTVGVNIRIGQQNALAYRR FT MNPVGLVPTLVTDDGESLGQSLAIVDWLDRHFPQTPLLPTSDPARSQALEIVYAIACDI FT HPINNMRVLRYLTDELKVSEEDKKRWYAHWIQQGLSAVEQLLRKSQSGRFCVGDAPGLA FT DCCLIPQWANALRMGCDLSGYPRCKAVYDACVQLPAFIAAASENQQDKIPA" FT misc_feature complement(187613..188206) FT /note="Pfam match to entry PF00043 GST, Glutathione FT S-transferases., score 109.10, E-value 3.8e-32" FT RBS complement(188211..188216) FT /note="possible RBS" FT CDS complement(188215..188916) FT /transl_table=11 FT /gene="STY2407" FT /product="FAA-hydrolase-family protein" FT /note="Similar to Pseudomonas sp. U2 putative FT isomerase-decarboxylase homolog from plasmid pWWU2 nagK FT TR:O86042 (EMBL:AF081362) (192 aa) fasta scores: E(): FT 2.7e-30, 46.9% id in 196 aa. May be fumarylpyruvate FT hydrolase, given the presence of putative gentisate FT 1,2-dioxygenase and putative maleylpyruvate isomerase in FT this gene cassette" FT /note="Paralogue of E. coli P76004; Fasta hit to P76004 FT (219 aa), 39% identity in 208 aa overlap" FT /db_xref="GOA:Q8XER2" FT /db_xref="HSSP:1GTT" FT /db_xref="InterPro:IPR011234" FT /db_xref="UniProtKB/TrEMBL:Q8XER2" FT /protein_id="CAD02557.1" FT /translation="MTKYVFQPQAPVTVPVAGSDEQFPVRRVYCVGRNYAAHAREMGFD FT PDREPPFFFCKPADAVVPVAAGDTLELPYPAQTDNYHYEIELVVAIGKKGSDIPLEKAH FT EYVWGYATGLDMTRRDRQMEMRQMGRPWEIGKAFDLSAPIAPLHKAAETHNVDNAPIWL FT QVNGEDHQRSDIRHLIWSVNETISYLSGFFELQPGDLIFTGTPEGVGAVVKGDVITGNV FT EGLTPIAVKIV" FT misc_feature complement(188275..188793) FT /note="Pfam match to entry PF01557 FAA_hydrolase, FT Fumarylacetoacetate (FAA) hydrolase family, score 201.40, FT E-value 1.4e-56" FT RBS complement(188924..188927) FT /note="possible RBS" FT CDS complement(188932..189969) FT /transl_table=11 FT /gene="STY2408" FT /product="putative gentisate 1,2-dioxygenase" FT /EC_number="1.13.11.4" FT /note="Similar to several e.g. Pseudomonas alcaligenes FT gentisate 1,2-dioxygenase xlnE TR:Q9S3U6 (EMBL:AF173167) FT (347 aa) fasta scores: E(): 0, 53.3% id in 338 aa" FT /db_xref="GOA:Q8Z5A9" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A9" FT /protein_id="CAD02558.1" FT /translation="MSEINQNVKDSRQQYYQHISGQNLTPLWESLHHLVPQTPNANCAP FT AYWNYQEIRPLLMESGNVIGAKEAIRRVLVLENPALRGQSSITATLYAGLQLILPGEVA FT PSHRHNQSALRFIVEGKGAFTAVDGERTPMHTGDFILTPQWRWHDHGNPGSEPVVWLDG FT LDLPLVNLLGCGFAEDYPEDQQPVTRKEGDYLPRYAANMLPLRHQRGNSSPIFNYRYDR FT SREALHDLTRMGDPDEWEGYKLRYVNPVTGGYPMPSMGAFLQLLPKGFASRVARSTDST FT IYHVVEGAGQVTIGNETFHFSAKDIFVAPTWHEVSFRSSEDTVLFSFSDKPVQEALGPF FT REARY" FT RBS complement(189977..189983) FT /note="possible RBS" FT CDS complement(189981..191339) FT /transl_table=11 FT /gene="STY2409" FT /product="putative n-hydroxybenzoate transporter" FT /note="Similar to e.g. Pseudomonas putida 4-hydroxybenzoate FT transporter pcaK SW:PCAK_PSEPU (Q51955) (448 aa) fasta FT scores: E(): 0, 43.8% id in 422 aa and Acinetobacter FT calcoaceticus 4-hydroxybenzoate transporter pcaK FT SW:PCAK_ACICA (Q43975) (457 aa) fasta scores: E(): 0, 43.2% FT id in 438 aa" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q8XF08" FT /protein_id="CAD02559.1" FT /translation="MTQRRDLQALIDAAPVGKMQWRVIICCFLVVMLDGFDTAAIGFIA FT PDIRTHWQLSASELAPLFGAGLLGLTAGALLCGPLADRFGRKRVIELCVALFGALSLLS FT AFSPDIETLVLLRFLTGLGLGGAMPNTITMTSEYLPARRRGALVTLMFCGFTLGSAMGG FT IVSAQLVPLIGWHGILALGGILPLMLFFGLLFALPESPRWQVRRQLPQAVVARTVSAIT FT GERYHDTQFFLHETAAVAKGSIRQLFAGRQLVITLMLWVVFFMSLLIIYLLSSWMPTLL FT NHRGIDLQQASWVTAAFQVGGTLGALLLGVLMDRLNPFRVLAVSYALGAVCIVMIGLSE FT NGLWLMALAIFGTGIGISGSQVGLNALTATLYPTQSRATGVSWSNAIGRCGAIVGSLSG FT GMMMALNFSFDTLFFVIAIPAAISAVMLTLLTVVVRLSISVPDDLPRASVVNE" FT misc_feature complement(190008..191264) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score 43.80, E-value 4e-09" FT RBS complement(191348..191351) FT /note="possible RBS" FT CDS 191465..192373 FT /transl_table=11 FT /gene="STY2410" FT /product="putative transcriptional regulator" FT /note="Similar to transcriptional regulators e.g. FT Azospirillum brasilense galactose-binding protein regulator FT gbpR SW:GBPR_AZOBR (P52661) (342 aa) fasta scores: E(): FT 1.7e-27, 32.9% id in 289 aa and Agrobacterium tumefaciens FT pca operon transcriptional activator pcaQ SW:PCAQ_AGRTU FT (P52668) (311 aa) fasta scores: E(): 2.2e-21, 29.9% id in FT 294 aa" FT /db_xref="GOA:Q8XG81" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q8XG81" FT /protein_id="CAD02560.1" FT /translation="MANWAQKLKLHHLQTLVALGEQGNLTHVARMMNISQPALSKWLSQ FT LEDEIGITLFERHSKGLRPSEGGKLLLQHAQRLINDLERSQYEIARFKQGGLVGSLKIG FT CSPVATDCVSQAILSLLNEMPTLHLNIEEKVMTPLLHDLLAGQVDVVVGRVGGRALQLP FT LNYQVLYTEPVCFVARPHHPLAARAQIAWSDLAHWRWIVWPTGTPIRISIDNALVDNGV FT MLPENTIESASMNVSTNLLQSSDMISILSLRLAQRYASQGQLAILNLPKIEQKGSVGMF FT WRKNETPSLALSRFLYFLAQV" FT misc_feature 191492..191920 FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 130.10, E-value 3.9e-35" FT misc_feature 191534..191626 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT CDS 192505..192903 FT /transl_table=11 FT /gene="STY2411" FT /gene_synonym="yohJ" FT /product="putative membrane protein" FT /note="Similar toe.g. Haemophilus influenzae hypothetical FT protein HI1297 SW:YOHJ_HAEIN (P45145) (140 aa) fasta FT scores: E(): 2.2e-12, 34.7% id in 124 aa and Bacillus FT subtilis hypothetical protein ysbA TR:P94515 (EMBL:Z75208) FT (146 aa) fasta scores: E(): 3.6e-06, 29.3% id in 123 aa. FT Contains hydrophobic, probable membrane-spanning regions" FT /note="Orthologue of E. coli yohJ (YOHJ_ECOLI); Fasta hit FT to YOHJ_ECOLI (132 aa), 92% identity in 132 aa overlap" FT /db_xref="GOA:P60635" FT /db_xref="InterPro:IPR005538" FT /db_xref="UniProtKB/Swiss-Prot:P60635" FT /protein_id="CAD02561.1" FT /translation="MSKSLNIIWQYIRAFVLIYACLYAGIFLASLLPITIPGSIIGMLI FT LFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAIST FT LVVFVVVSWSSHLIHGERKVVGQKGTKK" FT CDS 192900..193595 FT /transl_table=11 FT /gene="STY2412" FT /gene_synonym="yohK" FT /product="puatative membrane protein" FT /note="Similar to e.g. Haemophilus influenzae hypothetical FT protein HI1298 SW:YOHK_HAEIN (P45146) (231 aa) fasta FT scores: E(): 0, 43.2% id in 227 aa and Bacillus subtilis FT hypothetical protein ywbG SW:YWBG_BACSU (P39590) (241 aa) FT fasta scores: E(): 1.9e-24, 38.5% id in 218 aa. Conatins FT hydrophobic, probable membrane-spanning regions" FT /note="Orthologue of E. coli yohK (YOHK_ECOLI); Fasta hit FT to YOHK_ECOLI (231 aa), 91% identity in 230 aa overlap" FT /db_xref="GOA:Q8XGP7" FT /db_xref="InterPro:IPR007300" FT /db_xref="UniProtKB/TrEMBL:Q8XGP7" FT /protein_id="CAD02562.1" FT /translation="MMTYIWWSLPLTLAVFFAARRLAAHFKMPLLNPLLVAMVVIIPFL FT LLTGIPYEHYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIISICFVGSLVAMI FT TGTSVALLMGATPEIAASVLPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGH FT TLLNAMHIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVICGIITSLVAPFL FT FPLILAVMR" FT RBS 193738..193741 FT /note="possible RBS" FT CDS 193749..194633 FT /transl_table=11 FT /gene="STY2413" FT /gene_synonym="cdd" FT /product="cytidine deaminase" FT /note="Orthologue of E. coli cdd (CDD_ECOLI); Fasta hit to FT CDD_ECOLI (294 aa), 87% identity in 293 aa overlap" FT /db_xref="GOA:Q8Z5A8" FT /db_xref="HSSP:1CTT" FT /db_xref="InterPro:IPR016192" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5A8" FT /protein_id="CAD02563.1" FT /translation="MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNTA FT GLDEDALAFALLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAE FT QSAISHAWLRGEKGLAAVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDYLPD FT AFGPKDLEIKTLLMDEQDHGFTLTGNTLTQAAITAANKSHMPYSHSPSGVALECKDGRI FT FTGSYAENAAFNPTLPPLQGALNLLSLNGYDYADIQRAILAEKGDAALIQWDATAATLK FT ALGCHNIDRVLLG" FT misc_feature 193944..194180 FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT 59.60, E-value 6.8e-14" FT misc_feature 194052..194156 FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature" FT CDS 194810..195529 FT /transl_table=11 FT /gene="STY2414" FT /gene_synonym="sanA" FT /product="vancomycin resistance protein" FT /note="Similar, except for differing C-terminus, to FT Salmonella typhimurium vancomycin resistance protein sfiX FT TR:O33790 (EMBL:AJ002276) (187 aa) fasta scores: E(): 0, FT 98.2% id in 167 aa. Contains hydrophobic, possible FT membrane-spanning region near N-terminus" FT /note="Fasta hit to YGJQ_ECOLI (230 aa), 41% identity in FT 227 aa overlap" FT /note="Orthologue of E. coli sanA (SANA_ECOLI); Fasta hit FT to SANA_ECOLI (239 aa), 93% identity in 239 aa overlap" FT /db_xref="InterPro:IPR003848" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A7" FT /protein_id="CAD02564.1" FT /translation="MLKRVFYSLLVLVGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYR FT QVGVVLGTAKYYRKGVINQYYRYRIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRK FT DLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDINDFIIITQRFHCERALFIALHMGIQ FT AQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLVPIPTQHQVPNDAQGY FT PAVTPEQLLELEKKKGK" FT CDS 195526..195771 FT /transl_table=11 FT /gene="STY2415" FT /product="putative membrane protein" FT /note="Orthologue of E. coli P76439; Fasta hit to P76439 FT (79 aa), 60% identity in 79 aa overlap. Contains possible FT membrane-spannign hydrophobic region" FT /db_xref="UniProtKB/TrEMBL:Q8XGK7" FT /protein_id="CAD02565.1" FT /translation="MIMDVQTIFVILAFLLLPLFCFREAWKGWRTGAVDKVVKNARKPV FT YVYRHADPVQYWSYLFLYTGCGFLFTGMIIYLLFYR" FT RBS 195963..195970 FT /note="possible RBS" FT CDS 195976..197217 FT /transl_table=11 FT /gene="STY2416" FT /product="putative oxidoreductase" FT /note="Fasta hit to GLTD_ECOLI (471 aa), 32% identity in FT 443 aa overlap" FT /note="Orthologue of E. coli P76440; Fasta hit to P76440 FT (412 aa), 84% identity in 413 aa overlap" FT /db_xref="GOA:Q8Z5A6" FT /db_xref="HSSP:1GTE" FT /db_xref="InterPro:IPR001327" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z5A6" FT /protein_id="CAD02566.1" FT /translation="MPQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPG FT KFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQRGCTRSGIDKPIDIARLQRF FT ITDFEQQTAMQIYQPGSKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPGGWL FT RHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTVGMSCG FT SDLPLFEQASHVEIAVDFLQRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSV FT TCVAREELAEFPASEKEFTSTQALGVSIIDGFTPVAVSGNKVTFHHVRHSGELTLEAEN FT IILAVGQHARLDNFAEIKAQHNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEA FT AQAIHHYLEEACSC" FT misc_feature 196051..196068 FT /note="PS00190 Cytochrome c family heme-binding site FT signature" FT misc_feature 196636..197121 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 71.10, E-value FT 3.2e-20" FT RBS 197198..197203 FT /note="possible RBS" FT CDS 197211..198445 FT /pseudo FT /transl_table=11 FT /gene="STY2418" FT /gene_synonym="yeiA" FT /product="putative pyrimidine metabolism oxidoreductase FT (pseudogene)" FT /note="Similar to e.g. Bacillus subtilis dihydroorotate FT dehydrogenase SW:PYRD_BACSU (P25996) (311 aa) fasta scores: FT E(): 4.5e-17, 34.4% id in 221 aa and to C-terminal half of FT Sus scrofa dihydropyrimidine dehydrogenase [NADP+] FT precursor dpyD SW:DPYD_PIG (Q28943) (1025 aa) fasta scores: FT E(): 2e-26, 31.8% id in 400 aa. There is a frameshift at FT codon 76. The sequence has been checked and is believed to FT be correct" FT /note="Orthologue of E. coli yeiA (YEIA_ECOLI); Fasta hit FT to YEIA_ECOLI (411 aa), 93% identity in 335 aa overlap" FT misc_feature 197438..198091 FT /note="Pfam match to entry PF01180 DHOdehase, FT Dihydroorotate dehydrogenase, score -34.10, E-value FT 5.2e-08" FT misc_feature 198218..198289 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 17.80, E-value 0.0045" FT misc_feature 198320..198391 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 21.20, E-value 0.0013" FT misc_feature 198341..198376 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature" FT repeat_region 198452..198474 FT /note="inverted repeat flanking IS1" FT repeat_region 198452..199219 FT /note="IS1" FT CDS complement(198467..198970) FT /transl_table=11 FT /gene="insB" FT /gene_synonym="STY2419" FT /product="insertion element IS1 protein InsB" FT /note="Similar to Escherichia coli insertion element IS1 FT protein InsB insB SW:INSB_ECOLI (P03830; P77707) (167 aa) FT fasta scores: E(): 0, 97.0% id in 167 aa" FT /db_xref="GOA:Q7AQU0" FT /db_xref="InterPro:IPR005063" FT /db_xref="UniProtKB/TrEMBL:Q7AQU0" FT /protein_id="CAD02568.1" FT /translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDE FT QWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWP FT LYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNI FT KHYQ" FT CDS complement(198889..199164) FT /transl_table=11 FT /gene="STY2420" FT /gene_synonym="insA" FT /product="insertion element IS1 protein InsA" FT /note="Fasta hit to ISA2_ECOLI (91 aa), 90% identity in 91 FT aa overlap" FT /note="Paralogue of E. coli insA_5 (ISA1_ECOLI); Fasta hit FT to ISA1_ECOLI (91 aa), 98% identity in 91 aa overlap" FT /db_xref="GOA:Q7AQV4" FT /db_xref="InterPro:IPR003220" FT /db_xref="UniProtKB/TrEMBL:Q7AQV4" FT /protein_id="CAD02569.1" FT /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTY FT TASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" FT misc_feature complement(199096..199119) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT repeat_region complement(199197..199219) FT /note="inverted repeat flanking IS1" FT CDS complement(199297..200307) FT /transl_table=11 FT /gene="STY2421" FT /gene_synonym="mglC" FT /product="galactoside transport system permease protein FT MglC" FT /note="Similar to Salmonella typhimurium LT2 galactoside FT transport system permease protein mglc. galactoside FT transport system permease protein mglc SW:MGLC_SALTY FT (Q56036) (302 aa) fasta scores: E(): 0, 99.7% id in 291 aa" FT /note="Fasta hit to YDEZ_ECOLI (330 aa), 31% identity in FT 320 aa overlap" FT /note="Fasta hit to ALSC_ECOLI (326 aa), 36% identity in FT 332 aa overlap" FT /note="Fasta hit to YPHD_ECOLI (332 aa), 33% identity in FT 329 aa overlap" FT /note="Fasta hit to XYLH_ECOLI (393 aa), 31% identity in FT 370 aa overlap" FT /note="Fasta hit to ARAH_ECOLI (329 aa), 31% identity in FT 325 aa overlap" FT /note="Fasta hit to YJFF_ECOLI (323 aa), 33% identity in FT 316 aa overlap" FT /note="Fasta hit to RBSC_ECOLI (321 aa), 38% identity in FT 323 aa overlap" FT /note="Orthologue of E. coli mglC (MGLC_ECOLI); Fasta hit FT to MGLC_ECOLI (336 aa), 97% identity in 336 aa overlap" FT /db_xref="GOA:Q8Z5A5" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A5" FT /protein_id="CAD02570.1" FT /translation="MSALNKKSFLTWLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNI FT LTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMENANKVFPEMATMP FT IALVILIVCAIGAVIGLVNGIIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISG FT FDSGFSTFAQGFVAMGSFRLSYITFYALIAVVFVWVLWNKTRFGKNIFAIGGNPEAAKV FT SGVNVALNLLMIYALSGVFYAFGGLLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSG FT GVGTVFGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGGIIIFAVALDSLKYARKK" FT CDS complement(200323..201841) FT /pseudo FT /transl_table=11 FT /gene="mglA" FT /gene_synonym="STY2422" FT /product="galactoside transport ATP-binding protein MglA FT (pseudogene)" FT /note="Similar to Escherichia coli galactoside transport FT ATP-binding protein MglA mglA SW:MGLA_ECOLI (P23199; FT P76442) (506 aa) fasta scores: E(): 0, 96.9% id in 352 aa, FT and to Salmonella typhimurium galactoside transport FT ATP-binding protein MglA mglA SW:MGLA_SALTY (P23924) (506 FT aa) fasta scores: E(): 0, 99.7% id in 352 aa. Contains a FT frameshift after codon 147. The sequence has been checked FT and is believed to be correct" FT misc_feature complement(200398..200979) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 72.10, E-value 1.2e-17" FT misc_feature complement(200581..200625) FT /note="PS00211 ABC transporters family signature" FT misc_feature complement(201683..201706) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(201975..202973) FT /transl_table=11 FT /gene="STY2424" FT /gene_synonym="mglB" FT /product="D-galactose-binding periplasmic protein FT precursor" FT /note="Similar to Salmonella typhimurium FT D-galactose-binding periplasmic protein precursor mglB FT SW:DGAL_SALTY (P23905) (332 aa) fasta scores: E(): 0, 99.1% FT id in 332 aa" FT /note="Orthologue of E. coli mglB (DGAL_ECOLI); Fasta hit FT to DGAL_ECOLI (332 aa), 93% identity in 332 aa overlap" FT /db_xref="HSSP:1GCA" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A4" FT /protein_id="CAD02572.1" FT /translation="MNKKVLTLSAVMASLLFGAHAHAADTRIGVTIYKYDDNFMSVVRK FT VIEKDGKSAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKAR FT GQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGVIQGDLIAKHWQANQGWDLNKDGK FT IQYVLLKGEPGHPDAEARTTYVVKELNDKGIQTEQLALDTAVWDTAQAKDKMDAWLSGP FT NANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGAMAGTVLNDA FT NNQAKATFDLAKNLAEGKGAADGTSWKIENKIVRVPYVGVDKDNLSEFTQK" FT misc_feature complement(202110..202904) FT /note="Pfam match to entry PF00532 Peripla_BP_like, FT Periplasmic binding proteins and sugar binding domain of FT the LacI family., score 8.10, E-value 6e-06" FT RBS complement(202979..202982) FT /note="possible RBS" FT CDS complement(203472..204494) FT /transl_table=11 FT /gene="STY2425" FT /gene_synonym="galS" FT /product="mgl repressor and galactose ultrainduction FT factor" FT /note="Fasta hit to ASCG_ECOLI (336 aa), 37% identity in FT 334 aa overlap" FT /note="Fasta hit to CYTR_ECOLI (341 aa), 33% identity in FT 318 aa overlap" FT /note="Fasta hit to PURR_ECOLI (340 aa), 31% identity in FT 331 aa overlap" FT /note="Fasta hit to GALR_ECOLI (343 aa), 56% identity in FT 330 aa overlap" FT /note="Orthologue of E. coli galS (GALS_ECOLI); Fasta hit FT to GALS_ECOLI (346 aa), 88% identity in 340 aa overlap" FT /db_xref="GOA:Q8Z5A3" FT /db_xref="HSSP:1LQC" FT /db_xref="InterPro:IPR018114" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A3" FT /protein_id="CAD02573.1" FT /translation="MITIRDVARQAGVSVATVSRVLNNSALVSPDTRDAVMQAVTLLGY FT RPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKE FT RHAIEVLIRQRCNALIVHSKALTDRELSDFMDQIPGMVLINRIVPGYAHRCVCLDNVSG FT ARMATRMLLNNGHQRIGYLAFSHRIEDDAMRREGWLHALQEQGVAASESWIGTGTPDMQ FT GGESAMVELLGRNLQLTAVFAYNDNMASGALTALKDNGIAIPLHLSVIGFDDIPIARYT FT DPQLTTVRYPIASMAKIATELALQGAAGTLDITATHCFMPTLVRRHSVAWRQNAVLITN FT " FT misc_feature complement(203598..204323) FT /note="Pfam match to entry PF00532 Peripla_BP_like, FT Periplasmic binding proteins and sugar binding domain of FT the LacI family., score 107.80, E-value 2e-28" FT misc_feature complement(204414..204497) FT /note="Pfam match to entry PF00356 lacI, Bacterial FT regulatory proteins, lacI family, score 51.80, E-value FT 2.8e-13" FT misc_feature complement(204429..204485) FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature" FT CDS complement(204644..205786) FT /transl_table=11 FT /gene="STY2426" FT /gene_synonym="yeiB" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yeiB (YEIB_ECOLI); Fasta hit FT to YEIB_ECOLI (385 aa), 84% identity in 377 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="InterPro:IPR007349" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A2" FT /protein_id="CAD02574.1" FT /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAIVPE FT DAWSWAILDIVAQAKFLTLFALLFGAGLQMLLPRGKQWIQSRLTLLVLLGFIHALFFWD FT GDILLAYGLVGLICWRLVRDAPSVKSLFNTGILLYLVGIGVLLLLGVVSSSETSRAWTP FT DASAILYEKYWKLNGGMEAISNRAEMLSNSLLALGAQYGWQLAGMILLGAALMRSGWLK FT GQYSLRHYRRTGVLLVALGLMINLPAVILQWRLDWAYRWCAFLLQAPRELSAPLQTLGY FT AALMFGFWPQLSRCRLTLAIACVGRMALTNYLLQTIICTTLFYQFGLFMKFNRLELLFF FT VVPVWAINLLFSVIWLRFWRQGPVEWLWRQLTLRASGSLR" FT RBS complement(205790..205793) FT /note="possible RBS" FT CDS complement(205801..206469) FT /transl_table=11 FT /gene="STY2427" FT /gene_synonym="folE" FT /product="GTP cyclohydrolase I" FT /EC_number="3.5.4.16" FT /note="Orthologue of E. coli folE (GCH1_ECOLI); Fasta hit FT to GCH1_ECOLI (221 aa), 96% identity in 220 aa overlap" FT /db_xref="GOA:P64210" FT /db_xref="HSSP:1A8R" FT /db_xref="InterPro:IPR018234" FT /db_xref="UniProtKB/Swiss-Prot:P64210" FT /protein_id="CAD02575.1" FT /translation="MPSLSKEAALVHDALVARGLETPLRPPMDELDNETRKSLIAGHMT FT EIMQLLNLDLSDDSLMETPHRIAKMYVDEIFAGLDYANFPKITLIENKMKVDEMVTVRD FT ITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILTAL FT QTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHP FT " FT misc_feature complement(205810..206358) FT /note="Pfam match to entry PF01227 GTP_cyclohydroI, GTP FT cyclohydrolase I, score 410.20, E-value 2e-119" FT misc_feature complement(206002..206034) FT /note="PS00860 GTP cyclohydrolase I signature 2" FT misc_feature complement(206128..206178) FT /note="PS00859 GTP cyclohydrolase I signature 1" FT RBS complement(206480..206484) FT /note="possible RBS" FT RBS 206786..206791 FT /note="possible RBS" FT CDS 206799..207656 FT /transl_table=11 FT /gene="STY2428" FT /gene_synonym="yeiG" FT /product="putative esterase" FT /note="Fasta hit to YAIM_ECOLI (277 aa), 54% identity in FT 276 aa overlap" FT /note="Orthologue of E. coli yeiG (YEIG_ECOLI); Fasta hit FT to YEIG_ECOLI (278 aa), 88% identity in 276 aa overlap" FT /db_xref="GOA:Q8Z5A1" FT /db_xref="InterPro:IPR014186" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A1" FT /protein_id="CAD02576.1" FT /translation="MEMLEEHRCFGGWQQRWRHHAATLNCAMTFSIFLPPTQDNEPPPV FT LYWLSGLTCNDENFTTKAGAQRIAAELGIVLVMPDTSPRGEQVADDSGYDLGHGAGFYL FT NATQPPWASHYRMYDYLRDELPALIQTQFNVSDRCAISGHSMGGHGALIMALKNPGKYT FT SISAFAPIVNPSRVPWGIKALTAYLGEDESAWTEWDSCELMLASQPQDAIPVLIDQGDS FT DQFLADQLQPAVLAEAARQTAWPMTLRIQPGYDHSYYFIASFIEDHLRFHARYLRDEHE FT TSPT" FT misc_feature 207003..207623 FT /note="Pfam match to entry PF00756 Esterase, Putative FT esterase, score 352.30, E-value 5.2e-102" FT CDS complement(207645..208034) FT /transl_table=11 FT /gene="STY2429" FT /product="putative DNA-binding protein" FT /db_xref="GOA:Q8Z5A0" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q8Z5A0" FT /protein_id="CAD02577.1" FT /translation="MKYNTMNNDEIILSLCARLKETRLSLAMTQQQLADRAHVGIATIK FT RIEKGGGLNLDTLISLLRALDKLHNLDAVLFESELRNFHESYEGGEGSGRLQVRQQAAD FT LNNKSSAPQSEEVNYSAALENSLCW" FT misc_feature complement(207822..207980) FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 35.50, E-value 1.2e-06" FT CDS complement(208039..209406) FT /transl_table=11 FT /gene="STY2430" FT /gene_synonym="sdaC" FT /product="putative L-serine dehydratase" FT /EC_number="4.2.1.13" FT /note="Fasta hit to SDHM_ECOLI (455 aa), 50% identity in FT 452 aa overlap" FT /note="Fasta hit to TDCG_ECOLI (454 aa), 51% identity in FT 450 aa overlap" FT /note="Paralogue of E. coli sdaA (SDHL_ECOLI); Fasta hit to FT SDHL_ECOLI (454 aa), 49% identity in 453 aa overlap" FT /db_xref="GOA:Q8Z599" FT /db_xref="InterPro:IPR005131" FT /db_xref="UniProtKB/TrEMBL:Q8Z599" FT /protein_id="CAD02578.1" FT /translation="MESCLDIFKIVIGPSSSRTVGPMRAACHFISLLREQETLPLIREI FT EIELYGALSLSRKCHNVDTALYLGLLGCQPENVDLRSHMAVIKRAENENKIELPLSDAG FT GITIKVKIIANHQAHPGHPYAMTFCARDDYFTVYEETWFSTGAGQVRKHGEPLTPSLPL FT RTVSPFEFSHAAQLLALCRRNGLSVAALMMKNELCRHSPQTLQNYLAQIWDVMQQAVYR FT GLHTEGVLPGPYQVPRRACALHKTLQANRSASDFLTALNWVNAFAIAVSEENASGGQIV FT TAPTNGACGIIPAALCWYDKFVTPLEPGALTRFFLTAAAIAMLFKQNASILGSEVGCQG FT EIGVACSMAAAGLAELMGASVEQTLSAAEIAMEHHLGLTCDPLGGQVQIPCIERNAISA FT VKAINAATMAMSRVSEPCISLDEIIAAMYETGKDMSAKYRETYHGSLGKIQPRKRG" FT RBS complement(208043..208046) FT /note="possible RBS" FT RBS complement(209418..209422) FT /note="possible RBS" FT RBS 209612..209616 FT /note="possible RBS" FT CDS 209623..210510 FT /transl_table=11 FT /gene="STY2431" FT /product="putative hydrolase" FT /note="Similar, except at N-terminus, to phosphoserine FT phosphatases e.g. Escherichia coli phosphoserine FT phosphatase serB SW:SERB_ECOLI (P06862) (322 aa) fasta FT scores: E(): 4.2e-22, 41.0% id in 188 aa" FT /db_xref="GOA:Q8Z598" FT /db_xref="HSSP:1F5S" FT /db_xref="InterPro:IPR006383" FT /db_xref="UniProtKB/TrEMBL:Q8Z598" FT /protein_id="CAD02579.1" FT /translation="MSIIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALINT FT AYLKLTLPAECLTPEFYRYLRELSLQWQFDFFIKPQPLPANGIIAFDMDSTFIAEEGVD FT EIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSPGLL FT TILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNA FT ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINY FT HGFELLLFLIEDEL" FT CDS 210543..211865 FT /pseudo FT /transl_table=11 FT /gene="STY2432" FT /product="putative transport protein (pseudogene)" FT /note="Similar to Escherichia coli glycerol-3-phosphate FT transporter SW:GLPT_ECOLI (P08194) (452 aa) fasta scores: FT E(): 2.1e-31, 34.3% id in 277 aa, and to Bacillus subtilis FT glycerol-3-phosphate transporter SW:GLPT_BACSU (P37948) FT (444 aa) fasta scores: E(): 4.4e-31, 34.0% id in 288 aa and FT to Salmonella typhimurium regulatory protein uhpC FT SW:UHPC_SALTY (P27669) (442 aa) fasta scores: E(): 0, 39.9% FT id in 293 aa, and to Escherichia coli regulatory protein FT uhpC SW:UHPC_ECOLI (P09836; P76728) (439 aa) fasta scores: FT E(): 0, 39.7% id in 292 aa. Contains an in-frame TGA stop FT at codon 298; readthrough may be possible, and the S. FT typhimurium ortholog contains a Trp at this position. The FT sequence has been checked and is believed to be correct" FT CDS complement(211909..213900) FT /transl_table=11 FT /gene="STY2434" FT /gene_synonym="cirA" FT /product="colicin I receptor precursor" FT /note="Fasta hit to FEPA_ECOLI (746 aa), 33% identity in FT 764 aa overlap" FT /note="Orthologue of E. coli cirA (CIRA_ECOLI); Fasta hit FT to CIRA_ECOLI (663 aa), 88% identity in 663 aa overlap" FT /db_xref="GOA:Q8Z597" FT /db_xref="HSSP:1FEP" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q8Z597" FT /protein_id="CAD02581.1" FT /translation="MFRFNPFVRVGLCMSAVTLAWPVAAATDDGETMVVTASAIEQNLK FT DAPASISVITQQDLQRRPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILID FT GKRVNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQK FT WHGSVTVDSTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDEQQSSATTA FT TGETPRIEGFTSRDGNVEFAWTPNENHDVTAGYGFDRQDRDSDSLDKNRLERQNYALSH FT NGRWDLGNSELKFYGEKVENKNPGNSSPITSESNSIDGKYVLPLASVNQFLTFGGEWRH FT DKLSDAVSLTGGSSTKTSASQYALFLEDEWRIFEPLALTTGIRMDDHETYGDHWSPRAY FT LVYNATDTLTVKGGWATAFKAPSLLQLSPDWATNSCRGGCRIVGSPDLKPETSESWELG FT LYYRGEEGILEGVEASVTTFRNDVDNRISISRTPDVNAAPGYSNFVGFETNSRGQRVPV FT FRYYNVNKARIQGVETELKVPFNEAWKLSLNYTYNDGRDVSNGGNKPLSDLPFHTANGT FT LDWKPAQLEDWSFYVSGNYTGRKRADSATAKTPGGYVVWDTGAAWQATKNVKLRAGVLN FT VGDKDLKRDDYGYTEDGRRYFMAVDYRF" FT misc_feature complement(211912..211965) FT /note="PS01156 TonB-dependent receptor proteins signature FT 2" FT misc_feature complement(211912..212214) FT /note="Pfam match to entry PF00593 TonB_boxC, TonB FT dependent receptor C-terminal region, score 99.00, E-value FT 3.6e-26" FT RBS complement(213908..213911) FT /note="possible RBS" FT CDS complement(214246..215715) FT /transl_table=11 FT /gene="STY2435" FT /gene_synonym="lysP" FT /product="lysine-specific permease" FT /note="Fasta hit to CYCA_ECOLI (470 aa), 35% identity in FT 463 aa overlap" FT /note="Fasta hit to PHEP_ECOLI (458 aa), 37% identity in FT 469 aa overlap" FT /note="Fasta hit to YIFK_ECOLI (461 aa), 37% identity in FT 477 aa overlap" FT /note="Fasta hit to PROY_ECOLI (457 aa), 37% identity in FT 449 aa overlap" FT /note="Fasta hit to GABP_ECOLI (466 aa), 33% identity in FT 436 aa overlap" FT /note="Fasta hit to MMUP_ECOLI (475 aa), 40% identity in FT 450 aa overlap" FT /note="Fasta hit to ANSP_ECOLI (499 aa), 33% identity in FT 459 aa overlap" FT /note="Fasta hit to AROP_ECOLI (457 aa), 35% identity in FT 457 aa overlap" FT /note="Orthologue of E. coli lysP (LYSP_ECOLI); Fasta hit FT to LYSP_ECOLI (488 aa), 95% identity in 487 aa overlap" FT /db_xref="GOA:Q8Z596" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:Q8Z596" FT /protein_id="CAD02582.1" FT /translation="MGSKTKTTEAPALRRELKARHLTMIAIGGSIGTGLFVASGATISL FT AGPGGALFSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYWY FT NWAVTIAVDLVAAQLVMGWWFPDTPGWIWSALFLCVIFLLNYISVRGFGEAEYWFSLIK FT VATVIIFIIVGVAMIIGIFKGVEPVGWSNWTTGDAPFAGGFAAMIGVAMIVGFSFQGTE FT LIGIAAGESENPEKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPNLLRNDVKDISV FT SPFTLVFQHAGLLSAAAIMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLS FT RGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRG FT YVLQGYDVNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTIDWGGVAATYIGIP FT LFLLIWFGYKLIKGTHFVRYSEMHFPERVKK" FT misc_feature complement(214300..215679) FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 869.10, E-value 1.4e-257" FT misc_feature complement(215485..215580) FT /note="PS00218 Amino acid permeases signature" FT CDS complement(215905..216768) FT /transl_table=11 FT /gene="STY2436" FT /gene_synonym="yeiE" FT /product="putative transcriptional regulator" FT /note="Orthologue of E. coli yeiE (YEIE_ECOLI); Fasta hit FT to YEIE_ECOLI (293 aa), 92% identity in 287 aa overlap" FT /db_xref="GOA:Q8Z595" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q8Z595" FT /protein_id="CAD02583.1" FT /translation="MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQL FT GVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRVYASSTIGNYIL FT PAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLEDEL FT VVFAAPSSPLTQGPVTLEQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMELGNSE FT AIKHAVRHGLGISCLSRRVIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLSNALQR FT FLSYCE" FT misc_feature complement(216340..216756) FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 159.60, E-value 5.3e-44" FT misc_feature complement(216622..216714) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature" FT RBS 216878..216882 FT /note="possible RBS" FT CDS 216889..217938 FT /transl_table=11 FT /gene="STY2437" FT /gene_synonym="yeiH" FT /product="putative membrane protein" FT /note="Orthologue of E. coli yeiH (YEIH_ECOLI); Fasta hit FT to YEIH_ECOLI (349 aa), 89% identity in 349 aa overlap. FT Contains hydrophobic, possible membrane-spanning regions" FT /db_xref="GOA:Q7CB38" FT /db_xref="InterPro:IPR018383" FT /db_xref="UniProtKB/Swiss-Prot:Q7CB38" FT /protein_id="CAD02584.1" FT /translation="MTELTLQNHRRTMWHFIPGLALSAVITGVALWGGAIPAVAGAGFS FT ALTLAILLGMVIGNTVYPQIWKQCDGGVLFAKQHLLRLGIILYGFRLTFSQIADVGISG FT IVIDVLTLSSTFMLACFLGQKVFGLDRHTSWLIGAGSSICGAAAVLATEPVVKAEASKV FT TVAVATVVIFGTIAIFLYPAMYPLLAHWFSPETYGIYIGSTMHEVAQVVAAGHAVSPDA FT ENAAVIAKMLRVMMLAPFLIILAARVKQLSPATGAEKSKITIPWFAIFFIVVAIFNSFH FT LLPKAVVDMLVTLDTVLLAMAMAALGLTTHVSALKKAGAKPLLMALALFAWLIIGGGAI FT NVLIHSLIA" FT RBS 218006..218010 FT /note="possible RBS" FT CDS 218017..218874 FT /transl_table=11 FT /gene="STY2438" FT /gene_synonym="nfo" FT /product="endonuclease IV" FT /note="Orthologue of E. coli nfo (END4_ECOLI); Fasta hit to FT END4_ECOLI (285 aa), 88% identity in 285 aa overlap" FT /db_xref="GOA:Q8Z593" FT /db_xref="HSSP:1QUM" FT /db_xref="InterPro:IPR012307" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z593" FT /protein_id="CAD02585.1" FT /translation="MKYIGAHVSAAGGLANAPARAAEIGATAFALFTKNQRQWRAAPLT FT PQVIDDFKIACEKYHFSAAQILPHDSYLINLGHPVSEALEKSRDAFLDEMQRCEQLGLT FT LLNFHPGSHLMQIAQEDCLARIAESINIALAQTEGVTAVIENTAGQGSNLGFEFEQLAA FT IIDGVEDKSRVGVCIDTCHAFAAGYDLRTPEACEKTFAEFGKIVGFQYLRGMHLNDAKS FT AFGSRVDRHHSLGEGNIGHDAFRWIMQDARFDGIPLILETINPDIWAEEIAWLKAQQIA FT EAMA" FT misc_feature 218038..218856 FT /note="Pfam match to entry PF01261 AP_endonulease2, AP FT endonuclease family 2, score 577.10, E-value 1.1e-169" FT misc_feature 218221..218247 FT /note="PS00729 AP endonucleases family 2 signature 1" FT misc_feature 218539..218562 FT /note="PS00730 AP endonucleases family 2 signature 2" FT misc_feature 218659..218703 FT /note="PS00731 AP endonucleases family 2 signature 3" FT CDS complement(218939..220627) FT /transl_table=11 FT /gene="STY2439" FT /gene_synonym="fruA" FT /product="PTS system, fructose-specific IIBC component" FT /note="Fasta hit to PTVB_ECOLI (485 aa), 34% identity in FT 478 aa overlap" FT /note="Orthologue of E. coli fruA (PTFB_ECOLI); Fasta hit FT to PTFB_ECOLI (563 aa), 94% identity in 507 aa overlap." FT /db_xref="GOA:Q8Z592" FT /db_xref="InterPro:IPR013014" FT /db_xref="UniProtKB/TrEMBL:Q8Z592" FT /protein_id="CAD02586.1" FT /translation="MKTLLIIDANLGQARAYMAKTLLGAAAHKANLEIIDNPNDAELAI FT VLGESLPNDNALNGKKVWLGDIGRAVAHPELFLSEAKSHATPYSAPAAAAPAASGGPKR FT VVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAEADLVIV FT AADIEVDLAKFAGLPMYRTSTGLALKKTAQELDKAVAEATPYQPAGKASQAATEGKKES FT AGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKVPDTLAAALMQIGGGSAFALMV FT PVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYMAKLISTKLKLPQ FT SMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGG FT MMCTDMGGPVNKAAYAFGVGLLSTQTYAPMAAIMAAGMVPPLALGLATMVARRKFDKAQ FT QEGGKAALVLGLCFITEGAIPFAARDPMRVLPCCIVGGALTGAISMAVGAKLMAPHGGL FT FVLLIPGAITPVLGYLLAIVAGTLVAGLAYAVLKRPETEVAAKAA" FT RBS complement(220635..220639) FT /note="possible RBS" FT CDS complement(220644..221582) FT /transl_table=11 FT /gene="STY2441" FT /gene_synonym="fruK" FT /product="1-phosphofructokinase" FT /note="Fasta hit to K6P2_ECOLI (309 aa), 31% identity in FT 310 aa overlap" FT /note="Orthologue of E. coli fruK (K1PF_ECOLI); Fasta hit FT to K1PF_ECOLI (312 aa), 98% identity in 312 aa overlap" FT /db_xref="GOA:Q8XG93" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q8XG93" FT /protein_id="CAD02587.1" FT /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINV FT AKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVT FT DFNFSGFDVTPADWERFVNDSLSWLGQFDMVCVSGSLPAGVSPEAFTDWMTRLRSQCPC FT IIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIDAAHALREQGIAHVVI FT SLGAEGALWVNASGEWIAKPPAVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAV FT AALAVSQSNVGITDRPQLAAMMARVDLQPFN" FT misc_feature complement(220797..220838) FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2" FT misc_feature complement(220803..221468) FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 300.60, E-value 2.4e-93" FT misc_feature complement(221394..221468) FT /note="PS00583 pfkB family of carbohydrate kinases FT signature 1" FT misc_feature complement(221415..221489) FT /note="PS00464 Ribosomal protein L22 signature" FT CDS complement(221582..222712) FT /transl_table=11 FT /gene="STY2442" FT /gene_synonym="fruB" FT /product="pts system, fructose-specific IIA/FPR component" FT /note="Orthologue of E. coli fruB (PTFA_ECOLI); Fasta hit FT to PTFA_ECOLI (376 aa), 90% identity in 376 aa overlap" FT /db_xref="GOA:Q8Z591" FT /db_xref="HSSP:1A3A" FT /db_xref="InterPro:IPR002114" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z591" FT /protein_id="CAD02588.1" FT /translation="MFQLSVQDIHPGEQVGNKEEAIRQIAAALAQAGNVAGGYVDGMLA FT REQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPQGVTWGEGQVAYVAIGIAASSD FT EHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNETMTLDVIASS FT LVTLQALNAARLKEAGAVDAAFVAKTINDSPMNLGQGIWLNDSAEGNLRSAVAVSRATQ FT AFDVEGEKAALLVTVAMNDEQPIAVLKRLGDLLLNNKADRLLSADAATLLALLTSDDAL FT TDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSEITVTNLDGTGKPANGRSLMKVVAL FT GVKKGHRLRFTAQGEDAEQALKAIGDAIAAGLGEGA" FT RBS complement(221590..221594) FT /note="possible RBS" FT misc_feature complement(221621..221860) FT /note="Pfam match to entry PF00381 PTS-HPr, PTS HPr FT component phosphorylation sites, score 169.90, E-value FT 4.3e-47" FT misc_feature complement(221690..221737) FT /note="PS00589 PTS HPR component serine phosphorylation FT site signature" FT misc_feature complement(221801..221824) FT /note="PS00369 PTS HPR component histidine phosphorylation FT site signature" FT misc_feature complement(222467..222652) FT /note="Pfam match to entry PF00359 PTS_EIIA_2, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 2, score 113.20, E-value 1.7e-30" FT misc_feature complement(222524..222574) FT /note="PS00372 PTS EIIA domains phosphorylation site FT signature 2" FT RBS complement(222722..222726) FT /note="possible RBS" FT CDS 223082..224263 FT /transl_table=11 FT /gene="STY2443" FT /gene_synonym="yeiO" FT /gene_synonym="setB" FT /product="sugar efflux transporter" FT /note="Fasta hit to YABM_ECOLI (392 aa), 53% identity in FT 376 aa overlap" FT /note="Fasta hit to YICK_ECOLI (394 aa), 71% identity in FT 390 aa overlap" FT /note="Orthologue of E. coli yeiO (YEIO_ECOLI); Fasta hit FT to YEIO_ECOLI (393 aa), 90% identity in 393 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions" FT /db_xref="GOA:Q8Z590" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q8Z590" FT /protein_id="CAD02589.1" FT /translation="MHNSPAAAAPKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDE FT VHARPGMVGFFFTGSAVIGIIVSQFLAGRSDKKGDRKKLIVFCCVLGMLACVLFAWNRN FT YFILLFIGVFLSSFGSTANPQMFALAREHADRTGREAVMFSSILRAQVSLAWVIGPPLA FT YALAMGFSFTVMYLSAAVAFIVCGVMVWFFLPSMRKDAPLATGTLEAPRRNRRDTLLLF FT VICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGK FT RLLMCIAVVAGLCFYAGMLLAHAPATLLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGS FT ATTLYTNTIRVGWIIAGSLAGIAAEIWNYHAVFWFALVMIVATMFCLARIKDV" FT CDS complement(224328..224993) FT /transl_table=11 FT /gene="STY2444" FT /product="putative membrane protein" FT /note="Unknown function. Contains hydrophobic, possible FT membrane-spanning regions" FT /db_xref="UniProtKB/TrEMBL:Q8Z589" FT /protein_id="CAD02590.1" FT /translation="MRGENSEIDLVDVSLFLIRKWLSIVIATFIFVAIGYVFVSVHHDT FT KVVSITIKPNLDTPATYALCGYANDIQCKTTVILNQFSRFLPAEYKNKISFDAKNQLVL FT FKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYTKLSLLSEAV FT KNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA" FT CDS complement(224995..225117) FT /transl_table=11 FT /gene="STY2445" FT /product="hypothetical protein" FT /note="Unknown function. Has the characteristics of an FT N-terminal signal sequence; possibly frameshifted FT N-terminus of STY2444" FT /db_xref="UniProtKB/TrEMBL:Q8XFF5" FT /protein_id="CAD02591.1" FT /translation="MCGFYLMKKYTFAARAFIFTLVLLFVISVFGLTISVLKGM" FT CDS 225572..225976 FT /transl_table=11 FT /gene="STY2446" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli 30.9 kDa protein in FT frub-spr intergenic region. 30.9 kda protein in frub-spr FT intergenic region SW:YEIP_ECOLI (P33028) (275 aa) fasta FT scores: E(): 0.00039, 41.1% id in 73 aa" FT /db_xref="UniProtKB/TrEMBL:Q8Z588" FT /protein_id="CAD02592.1" FT /translation="MASSRVVKHMSPVGCKPEHTFGRKGEPKIRHKLSSESCTHLVFIG FT LPFGIPGIGDEIEGAIQQAPQPLRQSMLSPSIYNQMKDNRICPKKNPDLKCGRHHDQAC FT PQTFRRQGWKQKGQHSTLPPSRRHAIAYSR" FT misc_feature 226111..226677 FT /note="Pfam match to entry PF01132 EFP, Elongation factor P FT (EF-P), score 387.70, E-value 1.2e-112" FT CDS 226111..226683 FT /pseudo FT /transl_table=11 FT /gene="STY2447" FT /gene_synonym="yeiP" FT /product="EF-P-family protein (pseudogene)" FT /note="Similar to Vibrio cholerae elongation factor P FT family protein VC1209 TR:Q9KSP7 (EMBL:AE004200) (199 aa) FT fasta scores: E(): 0, 52.3% id in 193 aa. Note that this FT CDS is considearbly shorter than the E. coli gene at the 5' FT end, due to an insertion relative to E.c., but the same FT length as all the other homologs. The upstream gene FT contains the N-terminus of the E.c. gene" FT /note="Orthologue of E. coli yeiP (YEIP_ECOLI); Fasta hit FT to YEIP_ECOLI (275 aa), 92% identity in 227 aa overlap" FT /db_xref="PSEUDO:CAD02593.1" FT misc_feature 226570..226629 FT /note="PS01275 Elongation factor P signature" FT RBS 226887..226890 FT /note="possible RBS" FT CDS 226896..227882 FT /transl_table=11 FT /gene="STY2448" FT /gene_synonym="yeiR" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yeiR (YEIR_ECOLI); Fasta hit FT to YEIR_ECOLI (328 aa), 87% identity in 328 aa overlap" FT /db_xref="InterPro:IPR003495" FT /db_xref="UniProtKB/TrEMBL:Q8XFI7" FT /protein_id="CAD02594.1" FT /translation="MTKTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGID FT GALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDL FT LTAPVYEPWIDLRATLCILDPRLLLDQQSVANENFRDQLASADIIIANKTDRATAQSDA FT ALQQWWRQYGGDRQLIHAEHGQIDGKLLDLPRQNLAELPASAAHSHTHASKKGLAALNL FT PAQQRWRRSLNSGQGHQACGWIFDADTVFDTIGLLEWARLAPVGRVKGVMRIQEGLVRI FT NRQGDDLHIETQSVAPPDSRVELISNTETDWNTLQTALLKLRLATHA" FT misc_feature 226920..226943 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 227912..228631 FT /transl_table=11 FT /gene="STY2449" FT /product="putative membrane protein" FT /note="Orthologue of E. coli YEIU_ECOLI; Fasta hit to FT YEIU_ECOLI (237 aa), 83% identity in 230 aa overlap. FT Contains hydrophobic, possible membrane-spanning regions" FT /db_xref="GOA:Q8Z587" FT /db_xref="InterPro:IPR000326" FT /db_xref="UniProtKB/TrEMBL:Q8Z587" FT /protein_id="CAD02595.1" FT /translation="MTMKTRYSLIILLNAAGLALFLSWYLPVNHGFWFTIDSGIFHFFN FT QKLVESHAFLWWVAITNNRAFDGCSLLAMGGLMLSFWLKEDASGRRRIVIIGLVMLLTA FT VVLNQLGQALIPVKRASPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFSAFM FT LRYFGKTAGIIALIIFVVFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLSDRAI FT ALFEDYLPGGNKQILNK" FT CDS 229045..229617 FT /transl_table=11 FT /gene="STY2450" FT /product="putative lipoprotein" FT /note="Orthologue of E. coli SPR_ECOLI; Fasta hit to FT SPR_ECOLI (188 aa), 93% identity in 190 aa overlap. FT Contains a probable N-terminal signal sequence" FT /db_xref="InterPro:IPR000064" FT /db_xref="UniProtKB/TrEMBL:Q8XG53" FT /protein_id="CAD02596.1" FT /translation="MVKSQPILRYILRGIPAIAVAVLLSACSTTTNTAKNMHSETHAVG FT NSDSSSLQASQDEFENMVRNLDVKSRIMDQYADWKGVRYRLGGSTKKGVDCSSFVQRTF FT REQFGLELPRSTYEQQEMGKAVSRNNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTS FT SGVIISSMNEPYWKKRYNEARRVLSRS" FT misc_feature 229093..229125 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site" FT misc_feature 229270..229602 FT /note="Pfam match to entry PF00877 NLPC_P60, NLP/P60 FT family, score 202.60, E-value 5.9e-57" FT CDS 229943..231499 FT /transl_table=11 FT /gene="rtn" FT /gene_synonym="STY2451" FT /product="rtn protein" FT /note="Similar to Escherichia coli rtn protein (INVOLVED IN FT RESISTANCE TO PHAGES N4 AND LAMBDA) SW:RTN_ECOLI (P76446) FT (518 aa) fasta scores: E(): 0, 70.3% id in 518 aa" FT /note="Orthologue of E. coli RTN_ECOLI; Fasta hit to FT RTN_ECOLI (518 aa), 70% identity in 518 aa overlap. FT Contains hydrophobic, possible membrane-spanning regions" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q8Z586" FT /protein_id="CAD02597.1" FT /translation="MLTRDSSSGRKILLTCIITGIAAALLIGSLQFFLSWHKRDVKYNT FT LLSDVQHYLASYFADLKATTDILQPLTINTCQQVGAELTSRAAFSLNVRAFLLIKDKKV FT FCSSATGAMNMPLQQLVPDIDIRKDVAMAILPGTPMMPNKPTMVIWYRNPLLNNSGVFT FT SLNINLTPYLLYTTRQDDFNGIALIVGNTALSTFSSRLLTVAELPGTPSRQATINGLPL FT KIQLYADSWTYNDLWYALMLGCISGIVAGFICYFIYALRTRPGKEILTAIKHEQFYVVY FT QPVVDTRTLSVTGLEVLLRWRHPTAGEIPPDAFIHYAEAQQLIVPLTQHLFELIARDAP FT TLQKVMPVGAKFGINIAPEHLHSDSFKEDMHRLRDALPAHHFHIVLEITERNMLQQYEA FT AKLFEWLHSAGFEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIQAIGTETVTSPVLDT FT VLTLSRRLNMLTVAEGVETPEQARWLRDHGVNYLQGYWISRPLPLKDFVLWMSAPSVPE FT W" FT misc_feature 230720..231457 FT /note="Pfam match to entry PF00563 DUF2, Domain of unknown FT function 2, score 147.80, E-value 2e-40" FT RBS 231588..231593 FT /note="possible RBS" FT CDS 231606..233411 FT /transl_table=11 FT /gene="STY2452" FT /gene_synonym="yejA" FT /product="putative transport system periplasmic binding FT protein" FT /note="Orthologue of E. coli yejA (YEJA_ECOLI); Fasta hit FT to YEJA_ECOLI (604 aa), 86% identity in 601 aa overlap. FT Contains probable N-terminal signal sequence" FT /db_xref="GOA:Q8Z585" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q8Z585" FT /protein_id="CAD02598.1" FT /translation="MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFDY FT VNPAAPKGGQMTLSAIGTFDNFNRYSLRGNPGVRTEALYDTLFTTSDDEPGSYYPLIAD FT HARYAADYSWVEISINPRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTVKAI FT APLTVRIELAKPGKEDMLSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQWKMGQ FT YIVYSRVKNYWAANLPVNRGRFNLDTVRYDYYLDDNVAFEAFKAGAFDLRLENDAKNWA FT TRYIGKNFDNHYIIKEEQKNESAQDTRWLAFNIQRPVFKDRRVREAVTLAFDFEWMNKA FT LFYNAWSRTNSYFQNTEYAARNYPDADELVLLAPMKKDLPPEVFTQIYQPPVSNGDGYD FT RENLLKADALLTQAGWVINGQQRVNSVTGKPLTFELLLPASSNSQWVLPFQHNLQRLGI FT TMTIRQVDNSQLTNRMRSRDYDMMPRLWRAMPWPSSDLQISWASEYIDSSYNAPGVQSP FT VVDKLIAQIIAAQGDKAKLVPLGRALDRVLTWNYYMLPMWYMAQDRLAWWDKFSHPAIR FT PVYTIGLDTWWYDVNKAAKLPAARR" FT misc_feature 231972..232025 FT /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5, score FT 7.50, E-value 0.26" FT misc_feature 232083..232604 FT /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5, score FT 34.80, E-value 6.3e-09" FT RBS 233403..233409 FT /note="possible RBS" FT CDS 233421..234515 FT /transl_table=11 FT /gene="STY2453" FT /gene_synonym="yejB" FT /product="putative binding-protein-dependent transporter" FT /note="Similar to e.g. Bacillus subtilis oligopeptide FT transport system permease protein AppB appB SW:APPB_BACSU FT (P42062) (317 aa) fasta scores: E(): 1.5e-21, 30.9% id in FT 363 aa. Contains hydrophobic, probable membrane-spanning FT regions" FT /note="Orthologue of E. coli yejB (YEJB_ECOLI); Fasta hit FT to YEJB_ECOLI (364 aa), 96% identity in 364 aa overlap" FT /db_xref="GOA:Q8XGX2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q8XGX2" FT /protein_id="CAD02599.1" FT /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFG FT QGGALPGASGEGVRASHAQTGVGNISDSHYRGGRGLDPEVIAEITHRYGFDKPLHERYF FT KMLRDYLSFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVHNG FT SRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYYDIFPLRGLVSANFDTLPWYQKIT FT DYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRN FT AMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLI FT GLLLNILSDISYTLVDPRIDFEGR" FT misc_feature 234171..234389 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 68.80, E-value 1.1e-16" FT RBS 234504..234507 FT /note="possible RBS" FT CDS 234515..235540 FT /transl_table=11 FT /gene="STY2454" FT /gene_synonym="yejE" FT /product="putative binding-protein-dependent transporter" FT /note="Orthologue of E. coli yejE (YEJE_ECOLI); Fasta hit FT to YEJE_ECOLI (341 aa), 92% identity in 341 aa overlap" FT /db_xref="GOA:Q8Z584" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q8Z584" FT /protein_id="CAD02600.1" FT /translation="MPRLSPVNQARWARFRHNRRGYWSLWIFLVVFSLSLCAELIANDK FT PLLVRYEGQWYFPLVKNYSERDFGGPLATTADYQDPWLQRQLENRGWVLWAPVRFGANT FT INFATTQPFPSPPSAKNWLGTDANGGDVFARILYGTRISILFGLMLTICSSVMGVLAGA FT LQGYYGGKVDLWGQRLIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVV FT RAEFLRTRNFDYIRAAQALGVSDRDIILRHMLPNAMVATLTFLPFILCSSITTLTSLDF FT LGFGLPLGSPSLGELLLQGKNNLQAPWLGIAAFLSVAILLSLLIFIGEAVRDAFDPAKA FT V" FT misc_feature 235190..235420 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 71.10, E-value 2.4e-17" FT misc_feature 235193..235279 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp sign." FT CDS 235542..237131 FT /transl_table=11 FT /gene="STY2455" FT /gene_synonym="yejF" FT /product="putative ABC-transporter ATP-binding protein" FT /note="Fasta hit to YLIA_ECOLI (612 aa), 49% identity in FT 555 aa overlap" FT /note="Orthologue of E. coli yejF (YEJF_ECOLI); Fasta hit FT to YEJF_ECOLI (529 aa), 87% identity in 529 aa overlap" FT /db_xref="GOA:Q8Z583" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q8Z583" FT /protein_id="CAD02601.1" FT /translation="MTSPLLAIENLSVGFRQQQHVRPVVNAISLQVNAGETLALVGESG FT SGKSVTALSILRLLPTPPAVYLSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPMVS FT LNPLHTLEKQLYEVLSLHRGMRREAARAEMIGCLDRVGIRQASQRLRDYPHQLSGGERQ FT RVMIAMALLTRPELLIADEPTTALDVSVQAQILSLLRELQRELNMGLLFITHNLSIVKK FT LADSVAVMQHGKCVENQRADTLLSAPTHPYTQKLLNSEPTGDPVPLPAGQAPLLEVDKL FT RVAFPIRKGILKRVVDHNVVVNNISFTLHPGETLGLVGESGSGKSTTGLALLRLIRSEG FT RIVFDGQSLDTLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSGA FT QREQQVKAVMMEVGLDPETRHRYPAEFSGGQRQRIAVARALILKPSLIILDEPTSSLDK FT TVQAQILALLKSLQQKHRLAYIFISHDLHVVRALCHQVIVLRQGEVVEQGQCERVFTAP FT QQAYTRQLLALS" FT misc_feature 235644..236240 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 196.50, E-value 4.3e-55" FT misc_feature 235665..235688 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 236010..236054 FT /note="PS00211 ABC transporters family signature" FT misc_feature 236475..237047 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 204.40, E-value 1.7e-57" FT misc_feature 236496..236519 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 236817..236861 FT /note="PS00211 ABC transporters family signature" FT CDS complement(237135..237479) FT /transl_table=11 FT /gene="STY2456" FT /gene_synonym="yejG" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yejG (YEJG_ECOLI); Fasta hit FT to YEJG_ECOLI (114 aa), 90% identity in 114 aa overlap" FT /db_xref="UniProtKB/TrEMBL:Q8XG74" FT /protein_id="CAD02602.1" FT /translation="MNTLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGQSTENSLVALK FT LLSPAGDSAWSVMHKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAI FT AEPFSNNNPF" FT CDS complement(237775..237873) FT /transl_table=11 FT /gene="STY2457" FT /product="hypothetical protein" FT /note="Unknown function" FT /db_xref="UniProtKB/TrEMBL:Q8Z582" FT /protein_id="CAD02603.1" FT /translation="MTGAVSLNGAEECAGGVGGRYPLHDGKAKRLS" FT CDS complement(237870..239060) FT /transl_table=11 FT /gene="bcr" FT /gene_synonym="STY2458" FT /product="bicyclomycin resistance protein" FT /note="Similar to Escherichia coli bicyclomycin resistance FT protein bcr or bicA or bicR or sur or suxA SW:BCR_ECOLI FT (P28246) (396 aa) fasta scores: E(): 0, 93.2% id in 396 aa. FT Contains hydrophobic, probable membrane-spannign regions" FT /db_xref="GOA:Q8Z581" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q8Z581" FT /protein_id="CAD02604.1" FT /translation="MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAG FT SAQMTLSTYILGFALGQLIYGPMADSLGRKPVILGGTLVFAAAAVACALAQTIDQLIVM FT RFFHGLVAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSW FT HYIFWILAIAAILASVMIFALIKETLPVERRQPFHIRTTIGNFAALFRHKRVLSYMLAS FT GFSFAGMFSFLSAGPFVYIEINHVPPQDFGYYFALNIVFLFVMTIINSRFVRRVGALNM FT FRAGLWIQFAMAVWMVFSALMGIGFWALVVGVAAFVGCVSMVSSNAMAVILDEFPHMAG FT TASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIALCAACSILFYLYASRPKKR" FT misc_feature complement(237894..239018) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -86.90, E-value 0.00092" FT RBS complement(239067..239071) FT /note="possible RBS" FT CDS complement(239088..239783) FT /transl_table=11 FT /gene="STY2459" FT /gene_synonym="yejD" FT /gene_synonym="rsuA" FT /product="ribosomal small subunit pseudouridine synthase" FT /EC_number="4.2.1.70" FT /note="Orthologue of E. coli yejD (RSUA_ECOLI); Fasta hit FT to RSUA_ECOLI (231 aa), 95% identity in 230 aa overlap" FT /db_xref="GOA:P65841" FT /db_xref="HSSP:1KSK" FT /db_xref="InterPro:IPR002942" FT /db_xref="UniProtKB/Swiss-Prot:P65841" FT /protein_id="CAD02605.1" FT /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGDIIKNAAFKLLPEH FT AVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAYKLHAAGRLDID FT TTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAAQFAKGVQLHNEKDLTKP FT ATLEVITPVQVRLTISEGRYHQVKRMFAAVGNRVVELHRERIGAITLDENLAPGEYRPL FT TEEEIASVG" FT misc_feature complement(239208..239603) FT /note="Pfam match to entry PF00849 PseudoU_synth_2, RNA FT pseudouridylate synthase, score 105.00, E-value 1.5e-27" FT misc_feature complement(239445..239489) FT /note="PS01149 Rsu family of pseudouridine synthase FT signature" FT misc_feature complement(239643..239783) FT /note="Pfam match to entry PF01479 S4, S4 domain, score FT 24.70, E-value 0.0021" FT CDS 239935..241695 FT /transl_table=11 FT /gene="STY2460" FT /gene_synonym="yejH" FT /product="putative helicase" FT /note="Orthologue of E. coli yejH (YEJH_ECOLI); Fasta hit FT to YEJH_ECOLI (586 aa), 95% identity in 586 aa overlap" FT /db_xref="GOA:Q8XGB8" FT /db_xref="HSSP:1RIF" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q8XGB8" FT /protein_id="CAD02606.1" FT /translation="MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELA FT RVARGRVLVLAHVKELVAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSVARNL FT DAFQEEFSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQ FT FHYHGMVRGNDNALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLF FT SEADLNRELKKQQRITPHIISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALIT FT GDTPGPERDALIDNFKAQRFRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGR FT GLRLAPGKTDCLILDYAGNPHDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTA FT DGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDP FT DDMLKAALRLKDALVLRCSGMTMQHGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRT FT AFEQLFIRPHTRTPGVPLRWITAADIVAQQALLRHPDFVVARMKGQYWQVREKVFDYEG FT RFRRAHELRG" FT misc_feature 239938..240393 FT /note="Pfam match to entry PF00270 DEAD, DEAD/DEAH box FT helicase, score 34.80, E-value 4.3e-10" FT misc_feature 240730..240969 FT /note="Pfam match to entry PF00271 helicase_C, Helicases FT conserved C-terminal domain, score 65.70, E-value 1e-15" FT misc_feature 241102..241125 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 241820..242104 FT /transl_table=11 FT /gene="STY2461" FT /gene_synonym="rplY" FT /product="50s ribosomal protein L25" FT /note="Orthologue of E. coli rplY (RL25_ECOLI); Fasta hit FT to RL25_ECOLI (94 aa), 92% identity in 94 aa overlap" FT /db_xref="GOA:Q8XFE7" FT /db_xref="HSSP:1DFU" FT /db_xref="InterPro:IPR020055" FT /db_xref="UniProtKB/Swiss-Prot:Q8XFE7" FT /protein_id="CAD02607.1" FT /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHD FT QVMNMQAKAEFYSEVLTLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVRA" FT misc_feature 241829..242092 FT /note="Pfam match to entry PF01386 Ribosomal_L25p, FT Ribosomal L25p family, score 173.80, E-value 2.8e-48" FT CDS complement(242213..242833) FT /transl_table=11 FT /gene="STY2462" FT /product="putative membrane protein" FT /note="Unknown function. Contains hydrophobic, probable FT membrane-spanning regions" FT /db_xref="UniProtKB/TrEMBL:Q8Z580" FT /protein_id="CAD02608.1" FT /translation="MSKGIRQRPPVNFSLFRQVLYAHIVAFLMMLMLGMVFTVLSLVLF FT YTYGANWLLSLFICPLFLLSGLFITGFAFKSTWSSIRYYYDKGQLKRYGLNLDATLTHK FT EKVEIRIDNAKRQVRVDELELHVLFDFQFDSKTWSCGDLLTNEKVFDALNDGQTIPIRI FT LPWKPESASVRQRALFNRLKGMNTAAETTDPRLGEALIECGEV" FT RBS complement(242841..242845) FT /note="possible RBS" FT CDS complement(242861..243868) FT /transl_table=11 FT /gene="yejK" FT /gene_synonym="STY2463" FT /product="nucleoid-asociated protein" FT /note="Similar to Escherichia coli 37 kDa FT nucleoid-associated protein yejK SW:NA37_ECOLI (P33920) FT (334 aa) fasta scores: E(): 0, 96.4% id in 333 aa and FT Haemophilus influenzae 37 kDa nucleoid-associated protein FT homolog HI0839 SW:NA37_HAEIN (P44896) (341 aa) fasta FT scores: E(): 0, 53.2% id in 333 aa" FT /db_xref="GOA:P67715" FT /db_xref="InterPro:IPR007358" FT /db_xref="UniProtKB/Swiss-Prot:P67715" FT /protein_id="CAD02609.1" FT /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHR FT VYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVL FT FCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQS FT TRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV FT RQQVYSYCNEQLQAGEEIELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQ FT LTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK" FT RBS complement(243877..243882) FT /note="possible RBS" FT CDS 244048..244275 FT /transl_table=11 FT /gene="STY2465" FT /gene_synonym="yejL" FT /product="conserved hypothetical protein" FT /note="Orthologue of E. coli yejL (YEJL_ECOLI); Fasta hit FT to YEJL_ECOLI (75 aa), 91% identity in 75 aa overlap" FT /db_xref="InterPro:IPR009857" FT /db_xref="UniProtKB/Swiss-Prot:Q8XEL6" FT /protein_id="CAD02610.1" FT /translation="MPQLSRYSDEHVEQLLSELLSVLEKHKAPTDLSLMVLGNMVTNLI FT NTSVAPAQRQAIANSFARALQSSISEDNAH" FT CDS 244307..246067 FT /transl_table=11 FT /gene="STY2466" FT /gene_synonym="yejM" FT /product="putative sulphatase" FT /note="Orthologue of E. coli yejM (YEJM_ECOLI); Fasta hit FT to YEJM_ECOLI (586 aa), 87% identity in 586 aa overlap. FT Contains hydrophobic, probable membrane-spanning regions in FT the N-terminal half" FT /db_xref="GOA:Q8Z579" FT /db_xref="InterPro:IPR000917" FT /db_xref="UniProtKB/Swiss-Prot:Q8Z579" FT /protein_id="CAD02611.1" FT /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLATLLGSRYLFVADWPT FT TLAGRIYSYLSIVGHFSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATAGMTLLLID FT SEVFTRFHLHLNPIVWELVINPDQNEMARDWQLMFISVPVILLIEMLFATWSWQKLRSL FT TRRRHFARPLAAFFFVSFIASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHG FT LLDAQEYQRRLVEQGNPEAVSVQYPLSNLHYRDMGTGQNVLLITVDGLNYSRFEKQMPE FT LATFAEQNIDFTRHMSSGNTTDNGIFGLFYGISPGYMDGVLSTRTPAALITALNQQGYQ FT LGLFSSDGFASPLYRQALLSDFSMPAAQTQSDAQTASQWIDWLGRYAQEDNRWFSWISF FT SGTNIDDSNQKNFVKRYASAASDVDAQINRVLNALREAGKFDNTVVIITAGRGIPLTPE FT ENRFDWSQGHLQVPLVIHWPGTPAQRINVLTDHTDVMTTLMQRLLHVSTPANEYSQGQD FT IFTVPRRHNWVTAADGSTLAITTPQMTLVLNNNGHYQTYDLHGEKIKDQKPQLSLLLQV FT LTEEKRFIAN" FT misc_feature 245084..246046 FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 133.10, E-value 5e-36" FT tRNA 246141..246217 FT /note="tRNA Pro anticodon GGG, Cove score 77.97" FT CDS complement(246530..246730) FT /pseudo FT /transl_table=11 FT /gene="STY2466a" FT /product="UmuC-family protein (pseudogene)" FT /note="Similar to the C-termini of Escherichia coli FT SOS-repair protein umuC SW:UMUC_ECOLI (P04152) (422 aa) FT fasta scores: E(): 1.8e-17, 71.6% id in 67 aa and FT Salmonella typhimurium UmuC protein umuC SW:UMUC_SALTY FT (P22494) (422 aa) fasta scores: E(): 2.2e-19, 76.1% id in FT 67 aa" FT CDS complement(246837..249203) FT /transl_table=11 FT /gene="sspH2" FT /gene_synonym="STY2467" FT /product="secreted effector protein" FT /note="Similar to Salmonella typhimurium secreted protein FT SspH2 TR:Q9RPH0 (EMBL:AF160727) (788 aa) fasta scores: E(): FT 0, 99.6% id in 788 aa and to many secreted, FT leucine-rich-repeat proteins e.g. Shigella flexneri 65.4 FT kDa antigen IpaH 4.5 SW:IPA4_SHIFL (P18009) (574 aa) fasta FT scores: E(): 0, 44.9% id in 515 aa" FT /db_xref="GOA:Q8Z578" FT /db_xref="HSSP:1JL5" FT /db_xref="InterPro:IPR001611" FT /db_xref="UniProtKB/TrEMBL:Q8Z578" FT /protein_id="CAD02613.1" FT /translation="MPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTH FT QTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDS FT QEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAP FT QTPAEYDAVWSAWRRAAPAEESRGRAAAVQKMRACLNNGNAVLNVGESGLTTLPDCLPA FT HITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALP FT SGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTL FT PSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPV FT LPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS FT ERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRW FT HMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEA FT TSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRT FT LALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFR FT EWILQWGPLHRVLERKAPKRVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTI FT GARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN" FT misc_feature complement(247869..247937) FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat, score 10.50, E-value 29" FT misc_feature complement(247989..248057) FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat, score 16.70, E-value 0.54" FT misc_feature complement(248100..248177) FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat, score 10.80, E-value 27" FT misc_feature complement(248229..248297) FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat, score 11.20, E-value 23" FT misc_feature complement(248421..248477) FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat, score 9.10, E-value 46" FT CDS complement(249372..249827) FT /partial FT /transl_table=11 FT /gene="STY2468" FT /product="bacteriophage tail fiber assembly protein FT (pseudogene)" FT /note="Similar to Bacteriophage P2 probable tail fiber FT assembly protein G SW:VPG_BPP2 (P26699) (175 aa) fasta FT scores: E(): 6.9e-10, 46.6% id in 88 aa, and to FT Bacteriophage P2 probable tail fiber assembly protein G FT SW:TFA_BPP2 (P26699) (175 aa) fasta scores: E(): 6.9e-10, FT 46.6% id in 88 aa. This CDS contains no reasonable start FT codon" FT /protein_id="CAD02614.1" FT /translation="QRKKNKKNKQFLNIKNFIPYAPEPDDTLFADAAYLKSEDGQDWYG FT CQQLFSADTLKITYDDNDVITCITRDVSGLWPAGQSVAELPDTDENRRADIHAAGSLKT FT VKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK" XX SQ Sequence 250050 BP; 61540 A; 68094 C; 60827 G; 59589 T; 0 other; cccctggctt gtcaaagcct gttttcacaa aaaaagttcg tttgctgctt tattccacac 60 ttcggttaaa attcaccgtt tcctgatgat tttcacagca aaaagctctt actccctctt 120 tacgcgcagg tatctccaca gccagcgccc gcttatcaga cgccagtaaa acagtgcgcc 180 acgcacggcc cagtcaagaa acatccccag ccaaacccct acaaccccca tacccagcac 240 aataccaagc gtataccctg ccacaacgcg acagccccac atccccagca tcgataccca 300 catcgcaaat cgcacatcgc gcgcgccttt aaaacccgac ggcagcaccc acgcggcagc 360 ccaaattggc ataaaggcag cattaagcca gagcagaact ttcactacct cttttacgtc 420 ctgctcctgg gtataaaatg aggcaaacag acccgcgaac ggcgctgttc cccaggcgat 480 tgccgtaagt acgatagtcg acatccagaa tacatggcgc aattgacgct ctgcctgacc 540 aatttgcccg gtaccaagac gcttaccggt gataatagtc gacgccgaac caagggcgtt 600 acccggcaga ttgataagcg ccgccacgga aaaggcaata aagttacccg caataacgtt 660 agtgcccatt ccggcgacaa acatttgcgt cagtagcttg ccaccgttga acagcactga 720 ttcaatgctc gccggaatac cgatacccat cacttcccag ataatgccga aattcaacgg 780 cttcagatag cttttcagcg gaatgcgcag cgccggatta aaaccaatca tcagcaccca 840 aataatcgct accgcgccga tgtagcgcga aatggttaat cccagccccg caccggcaaa 900 acccagccct tgccaggaga aagccccgta aatcaggatg ctgctgatga caatattgag 960 aatgttcatc ccgccgttaa tcatcaacgg gattttcgta ttccctgccc cacgcagcgc 1020 gccgctaccg attagcgcaa ttgccgcagc cggataactc agtaccgtca gttcaaggta 1080 cgttaacgcc agccccttta cttctggcgt cgcctcgcct gcgacaatat taataatttc 1140 actgccgaaa taatgaatga ccactgccag cacaacggca aatagcgtca taatcaccag 1200 cgactggcgc gccgccgccc ttgcccgtcg cctatcgcgc ttgccgaggc taaaggcgac 1260 caccaccgta gtaccaagat cgatagccgc aaaaaaagcc ataattacca tattaaaact 1320 gtcggcaagc cccacgcccg ccattgcttc cttgcccaac caactgacga gaaaagtact 1380 gagcacgccc attagcaaaa cacaggtatt ttccagaaaa atggggatag caagtggggt 1440 gatttcacgc cagaacaaca ctttgtagct cttgcgtttg gcataccagg gcgtacggac 1500 gacaacctgg cgtaaggcag tggagacgtt caaaatggac cttaaagaag agagttgaaa 1560 ccacatttca ataatgagcg agaaatcgta aggctgcaaa gctttttgca gaaaaaatgt 1620 ctgcaaatgc aacaaagtga tgagataacc cgcaatcgaa tctgtaaggg gttaaatggg 1680 gtttgacaaa aatttttccg ccgctaatat acgaccccac acgattcctc tgtagttcag 1740 tcggtagaac ggcggactgt taatccgtat gtcactggtt cgagtccagt cagaggagcc 1800 agattttagt ttcgggatat ccctgcgagt ccggagacgt ttaaaaaata agaacttatc 1860 tttacccggt tgacctgata aggttttccg ggctttttgg catccatagt ttttgggggc 1920 ttaatcggcg gcctcgcggt tcgttgagaa aatgaagccc ctgccatgac actcactact 1980 aatacagatg ttccagccca tgaaaaccag caatgtggca ggatatttaa aggccagacc 2040 tgcctgcgct aatgttgacc ggcattccgg aacggcgctc cagcacctca ttaacccgcg 2100 aagtatcaac gtcatcccct ttgataaacg tgcgcagcac tggcgtaacg ggcaatggaa 2160 cttttttgtc tgactcaaat tcagcacggt tgcgagaaag cggttcgtgt acctccagcc 2220 aacgactgcc atccggctct accgaaaatt taacgggcct gtcgataatc tgaacgcggg 2280 ttcctacacg aacatggtcg aataaatatt taatatcgtc attgcgtaaa cggatacagc 2340 cctgactgac gcgaaggcca atgccaaagt tagcgttagt gccatgggtg gcatataacc 2400 tgccgatata tattgcgtat agccccatag ggttatccgg ccccgcaggc accatcgcgg 2460 gcagcgtttt tccctcttta gcatattccc gacgcgtatt agccgttggc acccaaaccg 2520 ggccatcttg tttgcgttca accgcagtta cccagttgcg cggcgtttca cggccagcct 2580 gaccaatacc aatgggtagt acctcaaccg tattcgtgcc tgcgggataa taataaaggc 2640 gcatctcggc gacgtttacc acaatacctt cacgaacggt gtcaggcaga atcaactgct 2700 gcggcactac cagtgtggaa ccagactgag gtaaaaacac atccacgccg ggattcgctt 2760 caagcatatt actcaacccc tgaccatagc gggcggcaaa tgactctaag ggctgagtat 2820 tgttctgagg tacggcgatt gtgacaggct gtcctaccag acgactgcct tcgggcggca 2880 acggatagct tatagccagc gagaaatggc ttaccaacaa gacgaaaaac ggaaaaaaag 2940 gtgtgatacg acgcattata tcccttcctt tgtcgcggca ggtgtgcgtt aagtatagct 3000 tttttctcac atggctggtg ttgtgcgccc gggttatgtt gcgtttgcgt tcccctccgg 3060 caggacaata ttactggccg ccaattcccc catattgtgg aacatggcgc acgcggcttc 3120 cacgatcggc atcgccagcg ccgcgccgct tccttcacct aaccgcatcg ccatatgcaa 3180 atagggttcc atagacaaat gcgcgagcgc gatgcgggcg cccttttccg ccgaaaagtg 3240 cgacgggatc agataaggtc tcaccgcagg cgcaatctga caggccgcca gcgctgccga 3300 gtaggaaaga aagccatcca gcaatacggg taagccacac cttgccgcgc caagcatcac 3360 gccggtcatc ccgaccagat caaacccccc caccttcgac aacacatcaa tgccgtcgcg 3420 cggattgggc tgattaatcg caatcgcccg ccgcacgacg tctactttat tatcgatgcg 3480 ggaaggcgga agattcgcgc caatccccac cacctctttt gcatcacttc ctgtaaaaac 3540 gctgaccatc gcggcggctg gcgtagtgtt cgccattccc agctccccaa cgccaaataa 3600 ggtcacgccg cgtttcgcca ggtcgcaggt atagcgggaa acctccagca aaagcgcctc 3660 agcctgagag cgactcatcg ccgggccaac ggcaatattt ccgcagccgc gcgcgacgcg 3720 catatcaact acgcccggaa taggttcggc atcaataccg acatcaatga catgcacctt 3780 tgcaccagcc tgagcggcaa gcacacatac gccggttgtt ccctgcgtca tattcgccgc 3840 ctgaatcgcc gtcacgattt tgggcgaaac cgctacgcct tcatcccaga cgccatggtc 3900 ggcgcacatc accagcaccg ccttttcacc tacctgcggc gtaccgttaa gacccggcat 3960 tcccgcgagc tgaacggcta aggtttccag tctgcccaag ctacccggcg gtttgagcag 4020 gccgtcaata tgttgctgcg cacgcgccat cgcctcggcg tccggcgcag gaatgtcacg 4080 gaataaagcg tgtagtgtct gcataagatg tctcgtccgt aataatcggc tcataacaga 4140 gccagcagaa agatcagttc gccaagttcg atcgccgcgc ccagcgtatc gccggtttga 4200 ccgccaagcg tacgtttaag caactggcca aggatgaaaa tcgccgcgag tgtgaccacc 4260 attgtggcca ggccttgcat accaagcagt aataccgtgg cgacgattac cgccaatccc 4320 agagtaatgc aggtttgccg tccgctgact ttaccgataa atacattgcc aagcccctct 4380 tcacgggcgt agcgatgacg gtacatcaat aaaacagcgc tgccgcgtcc ggccgcacag 4440 gccgccgcca gcgccgccaa cattggcgtt ccacgtaacg ccagttcgct gaccaccaga 4500 atttttgcca gtagcacaaa aataagcgcc agcccgccat gggttcccag acgactatcg 4560 cgcataatct ccagcattcg ctcgcggcgg cgcgcggaaa aaatgccatc gcaggtatcg 4620 gccagcccat ccaggtgaaa accaccggtc agcagcgcca gcgccaaaat acagaacaac 4680 gccgcgagcg gaataccgca ccagggttgc aggaggatga aaatcaggcc gctaatcccc 4740 cccagaatca acccgataaa gggaaacatc acgatcccac gcgaatactg ctcgaaatcc 4800 agtccctgcg accagcgtga cggcacgggc aagcggctaa taaaagcgag catggcccaa 4860 aacagcttac tcatttaatt ttgactccaa tacctgagac caccagccag acctcatccg 4920 ccgctgccgc cagtcgttgg ttgacccgac cggcaatatc acgaaaatgg cgcgccaggc 4980 ggttttccgg gacgatcccc attcccactt catttgtcac cagtaccact ttcgccgggc 5040 agcgctggca ggctgcaatt aaaatctgaa tttcatcgtc aatggcgcgc tccatcgccg 5100 cgtaatccca ctgttcggga tcgttttcgc ctcccagcgc aaacagcaga ttcgtcacca 5160 tggtggtaat acattccagc aaaatcgcgt cgtcaggggc aagatccgcg gtaatcaacg 5220 tatcaagatg ccgccagcat tctgcggtcc gccagtgtgc cggcctgcca tctttatgat 5280 gctgaattct cgccgccatc tcgtcatcaa gaatctgcga ggtggcgata tacagtacct 5340 gcggcgcatc gctaattaag gcttcagcat gacggctttt accactacgc gccccgcccg 5400 tcaccagaat catcataccg gctcctgatg ctgttgcatg atggtgtaaa ttttatcaat 5460 atcaatatgt tgccgcatcg cttccgccag cagatcaaat tgccgcgctt tatgctccgc 5520 ataacaaaaa gtcgtttccc acggcgcaag cccttttcgc gcccgtaacc cattgaccac 5580 cgcacgggta aaggcatcgc tgtcaaacag accgtgaagg taagtgccaa acgccagtcc 5640 gtcggcggtg accgcgccat ccgccacaga gcatccattt ttctgtaacg tcatggccgt 5700 acagcatcct tcctgcagca ccgtttcccc catgtggatt tcataaccgc gtaccggtag 5760 ccccgccgcg gcagccagcc agccgggcag ctcgcctgac attgtcgcgt taacctgcgt 5820 cgtggtttta tcctgtgcaa agcgagtgat cgtattaagc agtcccaggc ccggctgcgt 5880 acccagcccc gactccacct catccacaat agtgtcgccc agcatctggt agccaccgca 5940 aattcccatc accggcacgc cctgccgatg tgtctgcaat accgcatccg ccatcccgct 6000 ttcgcgcagc caggcgaggt cgctcagcgt attcttactg cccggcagga tcaccagatc 6060 agcgtcagtc aacgcttccg ggcggcgaat atagcgtatg cgcacatccg gctgcgccgc 6120 cagagcgtta aaatccgtaa agttagaaat atgtggcagt tgcacaatgg caatagtgat 6180 atcacggggg gcgttaccgc gatatttatc gttttgcagc gcgacgccat cttcatcttc 6240 cagatccaca tccagccatg gcatcactcc cagaaccggg acgccggtaa gcgattcgat 6300 ttgttcgata ccggaataga gtagcgccac gtcgccgcgg aatttgttga taatgacgcc 6360 ctttactctg tcacgctcct gtttgtgcag tagcgccagc gtgccataaa tagcggcgaa 6420 tacgccgccc cggtcgatat ccgccaccag aataaccgga cactgggcca tttccgccat 6480 tcccatattg acgatatcgc gatcgcgcag attgatttcc gccgggcttc cggcgccttc 6540 cagcacaata acgtcatatt cctgcgccag gctgttatag accgcaagga tttgctcacg 6600 caaacgcggt ttatagtcat ggtaactcac cgcatccata ttggtcgcca ctttccccat 6660 cagcacgacc tgcgcctggc gatcgctggt cggtttgagc agcaccggat tcatacgcac 6720 atctggcgtg atccccgcgg cttccgcctg aaaaatctgc gcccgcccca tctctttacc 6780 atccggcgta ataccagaat taagcgccat attttgcgat ttaaacggcg cggtacgcag 6840 accatcctga taaaaaatgc ggcataaacc ggccaccagc acacttttgc cgacgtcgga 6900 tgccgtcccc tgcaacataa ctgcctgcgt catgacgcct ccctgaatgc gcacttttgc 6960 attcgatgaa aaaactccgt ttctgtttta cacagcggca gtcccagttg agtatgaagt 7020 ttgaccagcc agggctgggt tagccccgcg tgttccatcg cttccgtaca cgcgaaaacc 7080 tcgccaggcg cgccatgcat caggatctgg ccctggcgta acacgtatac ggcatcgcta 7140 atttcataaa taagatcgat atcatggctg gagataatga catgatttcc ctgcgccaca 7200 atccgcctga tgatagcaat catctgagtg cgccctgcgg gatcaagacc agcagtgggt 7260 tcatccagca atagatagcg cgcctgtagc accagcgctc cggcgatagc cacacgtttt 7320 ttttgtccat gactcaaaca ctgaatgggc tgatggcgaa aatgttgggc gtcaaccagc 7380 gttagcgcct cgtcgacgcg gcgcgtgatt tccgcctccg gcacacccaa attacgtaaa 7440 ctaaacgcaa tgtcgctatc gatatcagta taaaaaatct gctgttcagg gtcctgaaaa 7500 accgtcgcaa cttgctggcg cagcgccagt agtccgcgct tgctgtaatc caacggtttt 7560 ccctgccaca atacggcccc tttttgcgga cgcaacaggc cgctcaggtt cataaaaagc 7620 gtagacttcc cacaaccgtt cgcgcccacc aaaccggtaa caggcgagag cgaaaaatcc 7680 agatttaacc ctttaagtac cggctcatcc tgataacgaa accacaggtc tgaagtggca 7740 agcataatag tccttacagg tgaaaatcac cctgatacag tttgatatcc agcgtggtgg 7800 tcatttgctg ataacgcatt aacacccgcg taaacaggag tccagtcagc attgccagag 7860 atcgatagcc gttcggcagg ctgcaataac caaaacgcag cgtttgcgca cgacggattg 7920 ccaccgcctc atccagaaga ataaagagaa agcgccacgt taacaggatt tgctcggtaa 7980 gcaggcgtgg aatatgcgcg cgcttaagca agctaattaa ctgcggaaac ggtaggttca 8040 tcaccagcca caacgtcgcg gacagcgccg tcaggctacg ccagaacgtt tcattcgccg 8100 taaccacgcc cgcacgggta atcccgatcc agtacggccc aacagatatg ccagccagca 8160 gcatttgcgg ctcgcggctg atgctgaaga taatcgttat cacgccgacc aacaaaaatc 8220 caaaaggtat cgccatccat cgacaccaac gccagaggga tatgcgcaat agccaacagc 8280 tcaatccggc aatgatcagc agctcaatgc cctgccctac aggcggcaga acaaacgcca 8340 gtatcatcat cgccagccac agcaaaaact tgcgctgcgg cgcaacgtgt gcccagcggc 8400 tttgatagct gagtcgatca agcccggtca tcacggcgtt gtttaccttt gcaatacccc 8460 aggatataaa aaatcaccgc cgcgccaaga gagccctgaa gggtaaacag caggctttca 8520 atttcaccgc tggcgggttc atataacggc tgaaaccaag gtttatactg cggcgcaaga 8580 gcctgaatct ggctttccgc ttcgccgtct gaaccgccat attcaccgcc atggttaata 8640 aaaaacggca gaatcaccag cgccaccacc atcgctaaca acatcaacgt ttttttcatt 8700 ttaatgtcct tgtacggtaa tcacttgccg tttggttaac tggtcataaa tcatgacggt 8760 taataaacct tcagcaatag cgacaggaat ctgtgtgagg cagaaaatcc ccataaactt 8820 cacaacagac cctgtcgctc cggcatgggg atcgggaaac gcaacgccaa gctggactga 8880 agtcacaaaa taggttgcca aatccgccag catcgcgcac agaaaaacgg cgacatcgcg 8940 gcgcagtccg gcacggcagg ccattttcca caccagataa ccgacaaccg ggccaatcac 9000 cgccatcgac attccgtttg cgccaagcgt cgtcaggccg ccgtgcgcca gcaatagcgc 9060 ctgaaacaac agcacaaccg cgccgagaat cgccaccacc ccaggcccga acaagataac 9120 cgccagacca acgccggtcg gatgtgaaca actccccgtt accgacggaa ttttgagcgg 9180 gacaggacaa aaataaacgc gccgcacagc gccagcagta ccttctgatg attatcctcc 9240 tgcacaatac gccgtaagcg taccagccca taccacaagc agggtaaaaa cagtaaccac 9300 caggccagcg cccacactgg cggtaaaaag ccctccatga tatgcatcgc aaacgcctgt 9360 tgcgggacaa ccatcagcaa tagcgctgca gccagtccac tgaaagacaa ctgtctaagc 9420 tgctgttcaa gtttcattct gcatactccc actgtttatt gaccagaatg gtcgaaaaat 9480 agggcaacgc tcgatcatcg ttgacctcgt ggaggtggcg ccagcactgc tcgccgggca 9540 gcgtggcctc ggacatcatt aaggcgcatt ccagcaggcc agcctgcgcc agcaacgctt 9600 taatacgggc gaatcggcca tacactttca tcaacaccag gctatcatgc tgttgtagcg 9660 cctgggctat ttccgcttcc ggcgcggtac aagaaataac cgccagcgat tgccgttcta 9720 tggcgagcgg cattttcgcg cgggcggcta tcgcggcgaa ggacgtgacg ccggggacaa 9780 tctccagcca ctccgggcag ccgattctct ggagtaaaaa aatccaggta ctgaatagca 9840 tcgcatcgcc cagggtaata aaaccgacct gtttacccgc ttccacctct gcggtaagcg 9900 cggcggcaac ctcgttccag accgcttctt tctcggcgcc gtcagcgctc atagggaaat 9960 ggcaacaacg tacttccgtc tgctcgccga gatagtcgcg cacaatcgac aacgccagac 10020 tatcgccccc cttacgaccg gcgggcgcat acagaatgtc cagcgagcca agaatccgcg 10080 ctgcgcggac ggttatcagg tcgggcgcgc ctggcccggt acttaatgcg tataatttac 10140 cgttcatgcc gcctcctcta ccgccatgtt cagcgcctgg tgcaaatgcg cgacaaacat 10200 cgcccggata gccgggtttt ctcccagccc gctcagccac ggcgtcgccg gaatgcccgc 10260 cgcgttaaag cgcattttcc atgagtcgcc gtcgtctgaa gccatatcat ttatggcgtg 10320 atcgcccgcc accagcatta atggcatcaa atgtatgccg gtgacgcctt cgtcacgcag 10380 gctgtcgatc aggatgtcga cctccgggta gctttctaca gcgccgacgc gcgccgggaa 10440 gcgctgcgcg gtcatcatat gatcgaggca ggcataagct gcgaatgcat gatggctggc 10500 gccgtggccc ataaaaacga ctttctccgt ttgtctgagc gatggcatct gttgtcgcaa 10560 cgcctgcatt agctgcacat aatcgttatg gctgctcagc agcggcacgc ccagcgtcag 10620 gcgagtaaat aacggacgca agatttgtac ttcacggaca attttttcat attcgtcgcc 10680 gttaataatg tgcaacgact gaatcgccac gtcctgatat ccctgtgctg caagcttttg 10740 caaagcctgt aatggcgtat cgatgtcgat accgtcacgc tggcgaagct tgcgaatgat 10800 cattccggaa gtgaaggcgc gaaacaggtc gcgatcggga caggactccg ccagatcacg 10860 ttcgcacgcc acaatgtttt ttcacaggtg tcgtgatagc tggtgccaaa actgaccacc 10920 agaagcgctt ttttcatttt tactccttag ctgcggccag ccagcgcgat aaacgctgcg 10980 caaaggcggc ctagctttcc agtaactcat cacccgtcac gagcggcgtc gggcgcgcaa 11040 taacgatgca gggaatgccc gcatccagac agggctgaac tttttcctga tatccccctc 11100 cgcgccggac gctttggtaa tgaccacgtc agcccggcac tggcggtaaa acgcggcgtt 11160 aaaatcagcg ctgaacggcc cacacagtgc gaaaatttct ccaacgccga accccagttc 11220 gctgcagcgt tgaatcacct ccgccacggg cagtacgcgc gccagcaacg ttttttccgc 11280 cagcccggca cgccagacgg ccagatcttt actgccggtc gtcagtaaca cgcgcggacc 11340 aaaacgcctc gctatctcgc aggcatcggc aatactgcgc gccgtataga gaagcggatg 11400 cgtcagattg ctaagctgct ccggacgctg ataacgactt aacaacacgt ccgccgtttc 11460 acaggcgcga aggaggttat ggctgaccat ttctgcataa ggatgcgacg catctattac 11520 ccagcgagta cggttttctt ttagccatgc gaccatctgc ccgtactcca gacgaccaca 11580 gcgcacctgt cctttaatgt cgccagccag cgcttttccg gctggcgtcg ccacagataa 11640 ggtgtacgcg acgttcgccg cacccagttg tcggcataac gcgcgcgcat cgctggtgcc 11700 gcccaccacc agcacctccc cctcattcac agcgtgtaac ctcgcggcgt tatcatcagc 11760 ccatcctgaa cataggtcgt tttattacca acgatgacca gactggtcat atctaccggt 11820 tcaaaatcca tatcgccgag cgtggtcagc catttttcct ctttcttacg tccggcggat 11880 ttcaccacgc caaccggcgt ttgcgcgctt ttactggcgg caagcaggtc aaacgcgcgc 11940 gccagatgcc cttcgcgccc gcggctgcgc gggttgtaaa aacagataac aaagtctgcc 12000 tctccggcgg caacgatgcg tttttcaata accggccacg gggtcagcag gtcgctgagg 12060 ctgatatggc agaagtcatg cattagcggc gcgcccagta aagaggcggc ggcgatgctg 12120 gcggtcatgc caggaatgag ccgcacctcg acgtccagtt tctgcttgct caccagctcc 12180 agcaccagtc ccgccatgcc gtaaataccg gcgtcgccgc tgctaatcag cgctacgtta 12240 tgcccggcct gcgccagttc aatagccgcc tggcagcgtt caatttcctt acacatgccg 12300 gtcttgatca cctgtttgtc gccggtgaat gctttaacca gatgggtata ggttttgtag 12360 cccacgacga tttccgccgc ctgaagcgcc tcaatcgcct ccatcgtcat cattgcctgt 12420 gagccagggc caattccgat tacgcttaac atcagtgtga aactcccaaa gtaatagtga 12480 cgccctgttc gcgcagggtt tcgcctaaca attgacc |