EBI Dbfetch

ID   AL627266; SV 1; linear; genomic DNA; STD; PRO; 268050 BP.
XX
AC   AL627266;
XX
DT   25-OCT-2001 (Rel. 69, Created)
DT   23-OCT-2008 (Rel. 97, Last updated, Version 6)
XX
DE   Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete
DE   chromosome; segment 2/20
XX
KW   .
XX
OS   Salmonella enterica subsp. enterica serovar Typhi
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Salmonella.
XX
RN   [1]
RP   1-268050
RX   DOI; 10.1038/35101607
RX   PUBMED; 11677608.
RA   Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J.,
RA   Churcher C., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M.,
RA   Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A.,
RA   Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T.,
RA   Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A.,
RA   Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M.,
RA   Rutherford K., Simmonds M., Skelton J., Stevens K., Whitehead S.,
RA   Barrell B.G.;
RT   "Complete genome sequence of a multiple drug resistant Salmonella enterica
RT   serovar Typhi CT18";
RL   Nature 413(6858):848-852(2001).
XX
RN   [2]
RP   1-268050
RA   Parkhill J.;
RT   ;
RL   Submitted (25-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Submitted on behalf of the Salmonalla sequencing team, Sanger Centre,
RL   Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
XX
DR   EMBL-CON; AL513382.
DR   GOA; P0A2M2.
DR   InterPro; IPR003796; RNR_NrdR-like.
DR   InterPro; IPR005144; ATP-cone.
DR   RFAM; RF01405; STnc490k.
DR   SILVA-LSU; AL627266.
DR   SILVA-SSU; AL627266.
DR   UniProtKB/Swiss-Prot; P0A2M2; NRDR_SALTI.
XX
CC   E-mail: parkhill@sanger.ac.uk
CC   
CC   Notes:
CC   Details of S. typhi sequencing at the Sanger Centre
CC   are available on the World Wide Web.
CC   (URL, http://www.sanger.ac.uk/Projects/S_typhi/)
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..268050
FT                   /organism="Salmonella enterica subsp. enterica serovar
FT                   Typhi"
FT                   /strain="CT18"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:90370"
FT   CDS             181..906
FT                   /transl_table=11
FT                   /gene="STY0239"
FT                   /gene_synonym="rpsB"
FT                   /product="30S ribosomal protein S2"
FT                   /note="Orthologue of E. coli rpsB (RS2_ECOLI); Fasta hit to
FT                   RS2_ECOLI (240 aa), 98% identity in 240 aa overlap"
FT                   /db_xref="GOA:P66542"
FT                   /db_xref="InterPro:IPR001865"
FT                   /db_xref="InterPro:IPR005706"
FT                   /db_xref="InterPro:IPR018130"
FT                   /db_xref="InterPro:IPR020589"
FT                   /db_xref="UniProtKB/Swiss-Prot:P66542"
FT                   /protein_id="CAD08674.1"
FT                   /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEK
FT                   TVPMFNEALAELNKISARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNW
FT                   KTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFV
FT                   IDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVR
FT                   EGRSQDLASQAEESFVEAE"
FT   misc_feature    196..231
FT                   /note="PS00962 Ribosomal protein S2 signature 1"
FT   misc_feature    205..855
FT                   /note="Pfam match to entry PF00318 Ribosomal_S2, Ribosomal
FT                   protein S2, score 441.70, E-value 6.5e-129"
FT   misc_feature    652..726
FT                   /note="PS00963 Ribosomal protein S2 signature 2"
FT   CDS             1164..2015
FT                   /transl_table=11
FT                   /gene="STY0240"
FT                   /gene_synonym="tsf"
FT                   /product="elongation factor Ts"
FT                   /note="Orthologue of E. coli tsf (EFTS_ECOLI); Fasta hit to
FT                   EFTS_ECOLI (282 aa), 97% identity in 282 aa overlap"
FT                   /db_xref="GOA:P64053"
FT                   /db_xref="InterPro:IPR000449"
FT                   /db_xref="InterPro:IPR001816"
FT                   /db_xref="InterPro:IPR009060"
FT                   /db_xref="InterPro:IPR014039"
FT                   /db_xref="InterPro:IPR018101"
FT                   /db_xref="UniProtKB/Swiss-Prot:P64053"
FT                   /protein_id="CAD08675.1"
FT                   /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSG
FT                   AIKAAKKAGNVAADGVIKTKIDGNVAFILEVNCQTDFVAKDAGFQAFADKVLDAAVAGK
FT                   ITDVEVLKAQFEEERVALVAKIGENINIRRVASLEGDVLGSYQHGARIGVLVAAKGADE
FT                   ELVKQLAMHVAASKPEFVKPEDVSADVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKK
FT                   FTGEVSLTGQPFVMEPSKSVGQLLKEHNADVTGFIRFEVGEGIEKVETDFAAEVAAMSK
FT                   QS"
FT   misc_feature    1170..1289
FT                   /note="Pfam match to entry PF02094 TS-N, TS-N domain, score
FT                   81.00, E-value 2.4e-20"
FT   misc_feature    1197..1244
FT                   /note="PS01126 Elongation factor Ts signature 1"
FT   misc_feature    1332..1952
FT                   /note="Pfam match to entry PF00889 EF_TS, Elongation factor
FT                   TS, score 356.50, E-value 2.9e-103"
FT   misc_feature    1386..1418
FT                   /note="PS01127 Elongation factor Ts signature 2"
FT   CDS             2160..2885
FT                   /transl_table=11
FT                   /gene="STY0241"
FT                   /gene_synonym="pyrH"
FT                   /product="uridine 5'-monophosphate kinase"
FT                   /note="Orthologue of E. coli pyrH (PYRH_ECOLI); Fasta hit
FT                   to PYRH_ECOLI (240 aa), 98% identity in 240 aa overlap"
FT                   /db_xref="GOA:P65934"
FT                   /db_xref="InterPro:IPR001048"
FT                   /db_xref="InterPro:IPR011817"
FT                   /db_xref="InterPro:IPR015963"
FT                   /db_xref="UniProtKB/Swiss-Prot:P65934"
FT                   /protein_id="CAD08676.1"
FT                   /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELV
FT                   ELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARL
FT                   MSAIPLNGVCDNYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLK
FT                   ATKVDGVFTADPAKDPSATMYDQLTYSEVLDKELKVMDLAAFTLARDHKLPIRVFNMNK
FT                   PGALRRVVMGEKEGTLITE"
FT   misc_feature    2187..2738
FT                   /note="Pfam match to entry PF00696 aakinase, Amino acid
FT                   kinase family, score 153.90, E-value 2.9e-42"
FT   CDS             3032..3589
FT                   /transl_table=11
FT                   /gene="STY0242"
FT                   /gene_synonym="frr"
FT                   /product="ribosome recycling factor"
FT                   /note="Orthologue of E. coli frr (RRF_ECOLI); Fasta hit to
FT                   RRF_ECOLI (185 aa), 94% identity in 185 aa overlap"
FT                   /db_xref="GOA:P66739"
FT                   /db_xref="InterPro:IPR002661"
FT                   /db_xref="InterPro:IPR015998"
FT                   /db_xref="UniProtKB/Swiss-Prot:P66739"
FT                   /protein_id="CAD08677.1"
FT                   /translation="MISDIRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYY
FT                   GTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPP
FT                   LTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKM
FT                   TDAAIKKVDAALADKEAELMQF"
FT   misc_feature    3086..3580
FT                   /note="Pfam match to entry PF01765 RRF, Ribosome recycling
FT                   factor, score 339.90, E-value 2.9e-98"
FT   CDS             3731..4927
FT                   /transl_table=11
FT                   /gene="dxr"
FT                   /gene_synonym="STY0243"
FT                   /gene_synonym="yaeM"
FT                   /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase"
FT                   /product="hypothetical protein in frr 3'region"
FT                   /EC_number="1.1.1.-"
FT                   /note="Similar to Escherichia coli 1-deoxy-D-xylulose
FT                   5-phosphate reductoisomerase dxr SW:DXR_ECOLI (P45568;
FT                   P77209) (398 aa) fasta scores: E(): 0, 88.9% id in 397 aa"
FT                   /note="Orthologue of E. coli yaeM (DXR_ECOLI); Fasta hit to
FT                   DXR_ECOLI (398 aa), 89% identity in 397 aa overlap"
FT                   /db_xref="GOA:Q8Z9A6"
FT                   /db_xref="InterPro:IPR003821"
FT                   /db_xref="InterPro:IPR013512"
FT                   /db_xref="InterPro:IPR013644"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z9A6"
FT                   /protein_id="CAD08678.1"
FT                   /translation="MKQLTILGSTGSIGCSTLDVVHHNPDSFRVIALVAGKNVARMAEQ
FT                   CLEFSPRYAVMDDTSSAEQLKIMLQQHGSRTEVLSGQQAACEMAALDEVGHVMAAIVGA
FT                   AGLLPTLAAIRAGKTILLANKESLVTCGRLFMDEVKRSNARLLPVDSEHNAIFQSLPQS
FT                   IQHNLGYADLEQNGVTSILLTGSGGPFRETPMCDLAAMTPDQACRHPNWSMGRKISVDS
FT                   ATMMNKGLEYIEARWLFNASARQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIA
FT                   HTMAWPNRVTSGAQPLDFCKLSALTFSAPDYQRYPCLKLAMEAFEQGQAATTALNAANE
FT                   ITVAAFLAQQIRFTDIAGLNLAVLERMDLHEPASVDDVLQVDAIAREVARKQVIRLSR"
FT   misc_feature    4064..4087
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             5240..5998
FT                   /transl_table=11
FT                   /gene="STY0244"
FT                   /product="undecaprenyl pyrophosphate synthetase"
FT                   /note="Orthologue of E. coli UPPS_ECOLI; Fasta hit to
FT                   UPPS_ECOLI (253 aa), 94% identity in 252 aa overlap"
FT                   /db_xref="GOA:Q8Z9A5"
FT                   /db_xref="InterPro:IPR001441"
FT                   /db_xref="InterPro:IPR018520"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z9A5"
FT                   /protein_id="CAD08679.1"
FT                   /translation="MLSATQPVSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAG
FT                   AKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNV
FT                   RLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAANYGGRWDIVQGVRQLAELVQA
FT                   GVLRPDQIDEERLGQQICMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPD
FT                   FDEQDFEGALHAFANRERRFGGTEPGDDKA"
FT   misc_feature    5306..5971
FT                   /note="Pfam match to entry PF01255 UPP_synthetase, Putative
FT                   undecaprenyl diphosphate synthase, score 492.70, E-value
FT                   2.8e-144"
FT   misc_feature    5804..5857
FT                   /note="PS01066 Undecaprenyl pyrophosphate synthetase family
FT                   signature"
FT   CDS             6011..6868
FT                   /transl_table=11
FT                   /gene="STY0245"
FT                   /gene_synonym="cdsA"
FT                   /product="phosphatidate cytidylyltransferase"
FT                   /note="Fasta hit to YNBB_ECOLI (298 aa), 33% identity in
FT                   298 aa overlap"
FT                   /note="Orthologue of E. coli cdsA (CDSA_ECOLI); Fasta hit
FT                   to CDSA_ECOLI (249 aa), 96% identity in 249 aa overlap"
FT                   /db_xref="GOA:Q8XG59"
FT                   /db_xref="InterPro:IPR000374"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XG59"
FT                   /protein_id="CAD08680.1"
FT                   /translation="MLKYRLISAFVLIPAVIAALFLLPPVGFAIITLVVCMLAAWEWGQ
FT                   LSGFAARSQRVWLAVLCGLLLALMLFLLPEYHHNIRQPLVEMSLWASLGWWVVALLLVL
FT                   FYPGSAAIWRNSKTLRLIFGLLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMILVWG
FT                   ADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLNVAPVILLI
FT                   CSVVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLLLLV
FT                   FRTL"
FT   misc_feature    6014..6853
FT                   /note="Pfam match to entry PF01148 Cytidylyltrans,
FT                   Phosphatidate cytidylyltransferase, score 134.80, E-value
FT                   1.6e-36"
FT   misc_feature    6725..6805
FT                   /note="PS01315 Phosphatidate cytidylyltransferase
FT                   signature"
FT   CDS             6880..8232
FT                   /transl_table=11
FT                   /gene="yaeL"
FT                   /gene_synonym="STY0246"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Escherichia coli hypothetical 49.1 kDa
FT                   protein in cdsa-hlpa intergenic region yaeL SW:YAEL_ECOLI
FT                   (P37764) (450 aa) fasta scores: E(): 0, 88.0% id in 450 aa,
FT                   and to Haemophilus influenzae hypothetical protein Hi0918
FT                   hi0918 SW:YAEL_HAEIN (P44936) (443 aa) fasta scores: E():
FT                   0, 53.9% id in 449 aa"
FT                   /note="Orthologue of E. coli yaeL (YAEL_ECOLI); Fasta hit
FT                   to YAEL_ECOLI (450 aa), 88% identity in 450 aa overlap"
FT                   /db_xref="GOA:Q8Z9A4"
FT                   /db_xref="InterPro:IPR001478"
FT                   /db_xref="InterPro:IPR004387"
FT                   /db_xref="InterPro:IPR008915"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z9A4"
FT                   /protein_id="CAD08681.1"
FT                   /translation="MLSILWNLAAFIIALGVLITVHEFGHFWVARRCGVRVERFSIGFG
FT                   KALWRRTDRYGTEYVIALIPLGGYVKMLDERAEPVAPELRRHAFNNKTVGQRAAIIAAG
FT                   PVANFIFAIFAYWLVFIIGVPGVRPVIGEITPNSIAAQAQIAPGTELKAVDGIETPDWD
FT                   AVRLQLVSKIGDQQTTVSVAPFGSDQRQDKTLDLRHWAFEPDKQDPVSSLGIRPRGPQI
FT                   EPVLSEVQANSAASKAGLQAGDRIVKVDGQPLTQWMKFVTFVRDNPGKPLALEIERQGS
FT                   ALSLTLTPDTKSVNGKAEGFAGVVPKIIPLPEEYKTIRQYGPFSAILEATDKTWQLMKL
FT                   TVNMLGKLITGDVKLNNLSGPISIAQGAGMSAEFGVIYYLMFLALISVNLGIINLFPLP
FT                   VLDGGHLLFLAIEKLKGGPVSERVQDFSYRIGSILLVLLMGLALFNDFSRL"
FT   misc_feature    6934..6963
FT                   /note="PS00142 Neutral zinc metallopeptidases, zinc-binding
FT                   region signature"
FT   misc_feature    7486..7716
FT                   /note="Pfam match to entry PF00595 PDZ, PDZ domain (Also
FT                   known as DHR or GLGF)., score 55.30, E-value 1.3e-12"
FT   CDS             8264..10675
FT                   /transl_table=11
FT                   /gene="yaeT"
FT                   /gene_synonym="STY0247"
FT                   /product="outer membrane protein precursor"
FT                   /note="Similar to Escherichia coli unknown protein from
FT                   2d-page spots m62/m63/o3/o9/t35 precursor yaeT
FT                   SW:UP05_ECOLI (P39170; P39181; P77465) (810 aa) fasta
FT                   scores: E(): 0, 93.0% id in 811 aa, and to Shigella
FT                   flexneri outer membrane antigen oma90 TR:AAD23568
FT                   (EMBL:AF120927) (810 aa) fasta scores: E(): 0, 93.0% id in
FT                   811 aa, and to Haemophilus influenzae protective surface
FT                   antigen d15 precursor SW:D151_HAEIN (P46024) (797 aa) fasta
FT                   scores: E(): 0, 45.5% id in 809 aa"
FT                   /note="Orthologue of E. coli UP05_ECOLI; Fasta hit to
FT                   UP05_ECOLI (810 aa), 93% identity in 811 aa overlap"
FT                   /db_xref="GOA:Q8Z9A3"
FT                   /db_xref="InterPro:IPR000184"
FT                   /db_xref="InterPro:IPR010827"
FT                   /db_xref="InterPro:IPR016474"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z9A3"
FT                   /protein_id="CAD08682.1"
FT                   /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLS
FT                   MPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGNTLLVQVKERPTIASITFSGNKS
FT                   VKDDMLKQNLEASGVRVGESLDRTTLSDIEKGLEDFYYSVGKYSASVKAVVTPLPRNRV
FT                   DLKLVFQEGVSAKIQQINIVGNHAFSTEELISHFQLRDEVPWWNVVGDRKYQKQKLAGD
FT                   LETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVSGNLAGHS
FT                   AEIEKLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSQPEINDADKTVKLRVN
FT                   VDAGNRFYVRKIRFEGNDTSKDSVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVD
FT                   TDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYSVGI
FT                   NGTKNDYQTYSELSVTNPYFTVDGVSLGGRIFYNDFEADDADLSDYTNKSYGTDVTLGF
FT                   PINEYNTLRAGLGYVHNKLSNMQPQIAMDRYLESMGDPDASDFAADDFTFNYGWTYNKL
FT                   DRGYFPTDGSRVNLTGKVTIPGSDNEYYKVSLDTATYVPIDNDHKWVVLGRTRWGYGDG
FT                   LGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYKNGAHTSWDDDDDYEDCTQESGCKS
FT                   DDAVGGNAMAVASLEFITPTPFISEKYANSVRTSFFWDMGTVWDTNWDPSSAPSDVPDY
FT                   SDPGNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGKTW"
FT   misc_feature    8270..10672
FT                   /note="Pfam match to entry PF01103 Bac_surface_Ag,
FT                   Bacterial surface antigen, score 1678.40, E-value 0"
FT   CDS             10798..11283
FT                   /transl_table=11
FT                   /gene="ompH"
FT                   /gene_synonym="STY0248"
FT                   /product="outer membrane protein OmpH precursor"
FT                   /note="Similar to Salmonella typhimurium outer membrane
FT                   protein OmpH precursor ompH SW:OMPH_SALTY (P16974) (161 aa)
FT                   fasta scores: E(): 0, 99.4% id in 161 aa, and to
FT                   Escherichia coli histone-like protein hlp-1 precursor hlpa
FT                   or skp or ompH SW:HLPA_ECOLI (P11457) (161 aa) fasta
FT                   scores: E(): 0, 90.1% id in 161 aa, and to Yersinia
FT                   enterocolitica cationic 19 kDa outer membrane protein
FT                   precursor ompH SW:OMPH_YEREN (P31519) (164 aa) fasta
FT                   scores: E(): 2.2e-28, 62.7% id in 166 aa"
FT                   /note="Orthologue of E. coli hlpA (HLPA_ECOLI); Fasta hit
FT                   to HLPA_ECOLI (161 aa), 90% identity in 161 aa overlap"
FT                   /db_xref="GOA:P0A1Z3"
FT                   /db_xref="InterPro:IPR005632"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1Z3"
FT                   /protein_id="CAD08683.1"
FT                   /translation="MKKWLLAAGLGLAMVTSAQAADKIAIVNMGNLFQQVAQKTGVSNT
FT                   LENEFKGRAAELQKMETDLQSKMQRLQSMKAGSDRTKLEKDVMSQRQTFAQKAQAFEKD
FT                   RARRSNEERNKLVTRIQTAVKKVANDQSIDLVVDANTVAYNSSDVKDITADVLKQVK"
FT   CDS             11287..12312
FT                   /transl_table=11
FT                   /gene="lpxD"
FT                   /gene_synonym="STY0249"
FT                   /product="UDP-3-O-[3-hydroxymyristoyl] glucosamine
FT                   N-acyltransferase"
FT                   /EC_number="2.3.1.-"
FT                   /note="Similar to Salmonella typhimurium
FT                   udp-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase
FT                   lpxd or fira or ssC SW:LPXD_SALTY (P18482) (340 aa) fasta
FT                   scores: E(): 0, 100.0% id in 340 aa, and to Escherichia
FT                   coli udp-3-o-[3-hydroxymyristoyl] glucosamine
FT                   N-acyltransferase lpxd or fira or omsA SW:LPXD_ECOLI
FT                   (P21645) (340 aa) fasta scores: E(): 0, 95.6% id in 340 aa,
FT                   and to Yersinia enterocolitica udp-3-o-[3-hydroxymyristoyl]
FT                   glucosamine N-acyltransferase lpxd or firA SW:LPXD_YEREN
FT                   (P32203) (339 aa) fasta scores: E(): 0, 82.9% id in 339 aa"
FT                   /db_xref="GOA:P0A1X5"
FT                   /db_xref="InterPro:IPR001451"
FT                   /db_xref="InterPro:IPR007691"
FT                   /db_xref="InterPro:IPR011004"
FT                   /db_xref="InterPro:IPR018357"
FT                   /db_xref="InterPro:IPR020573"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1X5"
FT                   /protein_id="CAD08684.1"
FT                   /translation="MPSIRLADLAEQLDAELHGDGDIVITGVASMQSATTGHITFMVNP
FT                   KYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAPSA
FT                   VIDATATLGSNVSVGANAVIESGVQLGDNVVIGAGCFVGKNSKIGAGSRLWANVTIYHD
FT                   IQIGENCLIQSSTVIGADGFGYANDRGNWVKIPQLGRVIIGDRVEIGACTTIDRGALDD
FT                   TVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICD
FT                   KVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKAIERKVNQQ
FT                   D"
FT   misc_feature    11584..11670
FT                   /note="PS00101 Hexapeptide-repeat containing-transferases
FT                   signature"
FT   misc_feature    11611..11664
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 14.40,
FT                   E-value 2.6"
FT   misc_feature    11665..11718
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 19.70,
FT                   E-value 0.072"
FT   misc_feature    11674..11760
FT                   /note="PS00101 Hexapeptide-repeat containing-transferases
FT                   signature"
FT   misc_feature    11719..11772
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 17.90,
FT                   E-value 0.25"
FT   misc_feature    11773..11826
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 15.80,
FT                   E-value 1.1"
FT   misc_feature    11884..11937
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 14.70,
FT                   E-value 2.2"
FT   misc_feature    11950..12003
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 18.60,
FT                   E-value 0.15"
FT   misc_feature    11959..12045
FT                   /note="PS00101 Hexapeptide-repeat containing-transferases
FT                   signature"
FT   misc_feature    12004..12057
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 12.90,
FT                   E-value 7.7"
FT   misc_feature    12058..12111
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 7.60, E-value
FT                   71"
FT   CDS             12418..12873
FT                   /transl_table=11
FT                   /gene="STY0250"
FT                   /gene_synonym="fabZ"
FT                   /product="(3R)-hydroxymyristol acyl carrier protein
FT                   dehydrase"
FT                   /note="Orthologue of E. coli fabZ (FABZ_ECOLI); Fasta hit
FT                   to FABZ_ECOLI (151 aa), 99% identity in 151 aa overlap"
FT                   /db_xref="GOA:P0A1I0"
FT                   /db_xref="InterPro:IPR010084"
FT                   /db_xref="InterPro:IPR013114"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1I0"
FT                   /protein_id="CAD08685.1"
FT                   /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVS
FT                   VNEPFFQGHFPGKPILPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRP
FT                   VVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
FT   misc_feature    12439..12837
FT                   /note="Pfam match to entry PF01377 Thioester_dehyd,
FT                   Thioester dehydrase, score 290.00, E-value 2.9e-83"
FT   CDS             12877..13665
FT                   /transl_table=11
FT                   /gene="STY0251"
FT                   /gene_synonym="lpxA"
FT                   /product="acyl-[acyl-carrier-protein]:UDP-N-acetylglucosamine
FT                   O-acyltransferase"
FT                   /note="Orthologue of E. coli lpxA (LPXA_ECOLI); Fasta hit
FT                   to LPXA_ECOLI (262 aa), 93% identity in 262 aa overlap"
FT                   /db_xref="GOA:Q8Z9A2"
FT                   /db_xref="InterPro:IPR001451"
FT                   /db_xref="InterPro:IPR010137"
FT                   /db_xref="InterPro:IPR011004"
FT                   /db_xref="InterPro:IPR018357"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z9A2"
FT                   /protein_id="CAD08686.1"
FT                   /translation="MIDKSVFIHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLK
FT                   SHVVVNGQTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQ
FT                   GGGLTKVGSDNLLMINAHVAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFC
FT                   IIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREGLVAIRNAYKLL
FT                   YRSGKTLDEAKLEIAELAEKHPEVKAFTEFFERSTRGPIR"
FT   misc_feature    12925..12978
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 22.80,
FT                   E-value 0.0081"
FT   misc_feature    12934..13020
FT                   /note="PS00101 Hexapeptide-repeat containing-transferases
FT                   signature"
FT   misc_feature    12979..13032
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 12.40,
FT                   E-value 11"
FT   misc_feature    13033..13086
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 11.30,
FT                   E-value 23"
FT   misc_feature    13123..13176
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 10.00,
FT                   E-value 34"
FT   misc_feature    13198..13251
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 1.50, E-value
FT                   4.7e+02"
FT   misc_feature    13252..13305
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 13.50,
FT                   E-value 5.1"
FT   misc_feature    13324..13377
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (four repeats), score 12.80,
FT                   E-value 8.4"
FT   misc_feature    13333..13419
FT                   /note="PS00101 Hexapeptide-repeat containing-transferases
FT                   signature"
FT   CDS             13665..14813
FT                   /transl_table=11
FT                   /gene="STY0252"
FT                   /gene_synonym="lpxB"
FT                   /product="lipid-A-disaccharide synthase"
FT                   /note="Orthologue of E. coli lpxB (LPXB_ECOLI); Fasta hit
FT                   to LPXB_ECOLI (382 aa), 95% identity in 382 aa overlap"
FT                   /db_xref="GOA:Q8Z9A1"
FT                   /db_xref="InterPro:IPR003835"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z9A1"
FT                   /protein_id="CAD08687.1"
FT                   /translation="MAAQRPLTIALVAGETSGDILGAGLIRALKARVPNARFVGVAGPR
FT                   MQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTRRFTELKPDVFVGIDAPDFNI
FT                   TLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRSTHMVLAFLPFEKAFYDKFNVPCRF
FT                   IGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQR
FT                   YPDLEVVVPLVNAKRREQFEKIKAEVAPDLAVHLLDGMAREAMIASDAALLASGTAALE
FT                   CMLAKCPMVVGYRMKPFTFWLAKRLVKTEYVSLPNLLAGRELVKELLQEECEPQKLAEA
FT                   LLPLLANGKTSHAMHDTFRELHQQIRCNADEQAADAVLELAQ"
FT   CDS             14810..15406
FT                   /transl_table=11
FT                   /gene="STY0253"
FT                   /gene_synonym="rnhB"
FT                   /product="ribonuclease HII"
FT                   /note="Orthologue of E. coli rnhB (RNH2_ECOLI); Fasta hit
FT                   to RNH2_ECOLI (198 aa), 93% identity in 198 aa overlap"
FT                   /db_xref="GOA:P0A2C2"
FT                   /db_xref="InterPro:IPR001352"
FT                   /db_xref="InterPro:IPR012337"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A2C2"
FT                   /protein_id="CAD08688.1"
FT                   /translation="MIEFVYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPARPIVGLND
FT                   SKKLSEKRRLSLYDEIKEKALSWSLGRAEAHEIDELNILHATMLAMQRAVAGLHIAPEY
FT                   VLIDGNRCPELPVPSMAVVKGDSRVAEISAASILAKVTRDAEMAALDIVFPQYGFAQHK
FT                   GYPTAFHLEKLAQYGATAHHRRSFAPVKRALGLVS"
FT   misc_feature    14846..15379
FT                   /note="Pfam match to entry PF01351 RNase_HII, Ribonuclease
FT                   HII, score 314.20, E-value 1.6e-90"
FT   CDS             15430..18912
FT                   /transl_table=11
FT                   /gene="STY0254"
FT                   /gene_synonym="dnaE"
FT                   /product="DNA polymerase III, alpha chain"
FT                   /note="Orthologue of E. coli dnaE (DP3A_ECOLI); Fasta hit
FT                   to DP3A_ECOLI (1160 aa), 97% identity in 1160 aa overlap"
FT                   /db_xref="GOA:Q8Z9A0"
FT                   /db_xref="InterPro:IPR003141"
FT                   /db_xref="InterPro:IPR004013"
FT                   /db_xref="InterPro:IPR004365"
FT                   /db_xref="InterPro:IPR004805"
FT                   /db_xref="InterPro:IPR011708"
FT                   /db_xref="InterPro:IPR016027"
FT                   /db_xref="InterPro:IPR016195"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z9A0"
FT                   /protein_id="CAD08689.1"
FT                   /translation="MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFT
FT                   NLCGLVKFYGAGHGAGIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLLISKA
FT                   YQRGYGAAGPIIERDWLVELKEGLILLSGGRMGDVGRCLLRGNQALVEECVAFYEAHFP
FT                   DRYFLELIRTGRQDEETYLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVAIHDG
FT                   FTLDDPKRPRNYSPQQYMRSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQF
FT                   PTGDMTTEDYLVKKSKEGLEERLAFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGY
FT                   FLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSM
FT                   PDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDR
FT                   ISKLVPPDPGMTLAKAFEAEPQLPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVI
FT                   APTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRR
FT                   AKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALV
FT                   ALFRPGPLQSGMVDNFIDRKHGREELSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIA
FT                   QVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAG
FT                   YGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGLVDECWRMGLKIL
FT                   PPDINSGLYHFHVNDEGEIVYGIGAIKGVGEGPIEAIIDARNQGGYFRELFDLCARTDT
FT                   KKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAEAIGQADMFGVLAEE
FT                   PEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTE
FT                   RGKVTTAAGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDRIL
FT                   IVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLLNRLRQSLEP
FT                   HRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVELEFD"
FT   misc_feature    15448..15645
FT                   /note="Pfam match to entry PF02231 PHP_N, PHP domain
FT                   N-terminal region, score 106.60, E-value 4.8e-28"
FT   CDS             18925..19884
FT                   /transl_table=11
FT                   /gene="STY0255"
FT                   /gene_synonym="accA"
FT                   /product="acetyl-coenzyme A carboxylase carboxyl
FT                   transferase subunit alpha"
FT                   /note="Orthologue of E. coli accA (ACCA_ECOLI); Fasta hit
FT                   to ACCA_ECOLI (318 aa), 98% identity in 318 aa overlap"
FT                   /db_xref="GOA:P0A1C4"
FT                   /db_xref="InterPro:IPR001095"
FT                   /db_xref="InterPro:IPR011763"
FT                   /db_xref="InterPro:IPR020582"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1C4"
FT                   /protein_id="CAD08690.1"
FT                   /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLRE
FT                   KSVELTRKIFADLGAWQVAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGG
FT                   IARLEGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMEMAERFNMPIITFIDT
FT                   PGAYPGVGAEERGQSEAIARNLREMSRLNVPVICTVIGEGGSGGALAIGVGDKVNMLQY
FT                   STYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEA
FT                   MAASLKAQLLEDLADLDVLSTDDLKNRRYQRLMSYGYA"
FT   repeat_region   19922..20646
FT                   /note="IS200"
FT   CDS             20076..20534
FT                   /transl_table=11
FT                   /gene="tnpA"
FT                   /gene_synonym="STY0256"
FT                   /product="transposase for insertion sequence element IS200"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi transposase for insertion sequence element IS200 tnpA
FT                   SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 99.3%
FT                   id in 152 aa"
FT                   /db_xref="GOA:Q7WRV2"
FT                   /db_xref="InterPro:IPR002686"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WRV2"
FT                   /protein_id="CAD08691.1"
FT                   /translation="MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLC
FT                   EWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNRE
FT                   FWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSLFTGRK"
FT   misc_feature    20130..20441
FT                   /note="Pfam match to entry PF01797 Transposase_17,
FT                   Transposase IS200 like, score 244.30, E-value 1.7e-69"
FT   CDS             20774..22537
FT                   /transl_table=11
FT                   /transl_except=(pos:21296..21298,aa:Trp)
FT                   /gene="STY0257"
FT                   /product="putative secreted chitinase"
FT                   /note="Similar to Vibrio cholerae chitinase, putative
FT                   TR:AAF93934 (EMBL:AE004162) (574 aa) fasta scores: E(): 0,
FT                   39.3% id in 582 aa, and to Aeromonas sp10S-24. family 19
FT                   chitinase TR:Q9WXI9 (EMBL:AB025420) (686 aa) fasta scores:
FT                   E(): 0, 42.0% id in 376 aa, and to Oryza sativa chitinase
FT                   precursor chia1 TR:Q42992 (EMBL:L37289) (333 aa) fasta
FT                   scores: E(): 1.8e-19, 35.1% id in 259 aa. Contains stop
FT                   codon at aa 175; this may be read through by the insertion
FT                   of Trp; there is a TGAA sequence, and the Vibrio cholerae
FT                   protein contains a Trp at the equivalent site. Contains
FT                   probable N-terminal signal sequence"
FT                   /db_xref="GOA:Q8Z999"
FT                   /db_xref="HSSP:2BAA"
FT                   /db_xref="InterPro:IPR000601"
FT                   /db_xref="InterPro:IPR000726"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z999"
FT                   /protein_id="CAD08692.1"
FT                   /translation="MGLQKTLALSAVAAGIMLSLSGAQAAPLLSSSEPMTINASDLAAK
FT                   EKALTDFPLMEAVKSSIQTLDNSAVEQIEPGRAANPANVKRVESILKEADWDYLFPMRA
FT                   PEYTYSNFLKAIGKFPAVCGTYTDGRDSDAICRKTLATMFAHFAQETGGHESWRDIPEW
FT                   RQALVYLREVGWTEGQKGGYNGECNPDVWQGQTWPCGKDKDGDFLSYFGRGAKQLSYNY
FT                   NYGPFSDAMYGDVRPLLDKPELVADTWMNLASAVFFFVYPQPPKPSMLHVIDGTWQPND
FT                   RDKANGLVSGFGVTIQIINGGVECGGADENAQSLNRIAYYKEFANYLKVPVPADEVLGC
FT                   KKMKQFDEGGAGALPIYWEQDWGWSADTADGKTYSCQLVGYQTPYTAFKEGDYTKCVQH
FT                   YFNVNVVDDNGTTEPDVTPTPAPVTDENVAPVARIAGPVGAVEAGSQVSLNAEGSTDAN
FT                   GDKLTYTWMSQDGKTLSGQDKAVVIFNAPDVTQNTQYVVNLTVSDGTLSSTAVYTLNVK
FT                   AKAAAADDEDKTTSYPAWSSSQKWNPGDIVNSNGALYQCKPFPEGSWCNVAPAYYEPGV
FT                   GIAWADAWNAL"
FT   misc_feature    21482..21766
FT                   /note="Pfam match to entry PF00182 Glyco_hydro_19,
FT                   Chitinases class I, score 70.40, E-value 5.9e-19"
FT   misc_feature    21869..21892
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    22058..22330
FT                   /note="Pfam match to entry PF00801 PKD, PKD domain, score
FT                   6.00, E-value 0.31"
FT   CDS             22613..24754
FT                   /transl_table=11
FT                   /gene="STY0259"
FT                   /gene_synonym="ldcC"
FT                   /product="lysine decarboxylase"
FT                   /note="Fasta hit to ADI_ECOLI (755 aa), 35% identity in 720
FT                   aa overlap"
FT                   /note="Fasta hit to DCOS_ECOLI (732 aa), 32% identity in
FT                   694 aa overlap"
FT                   /note="Fasta hit to DCOR_ECOLI (731 aa), 35% identity in
FT                   626 aa overlap"
FT                   /note="Fasta hit to DCLY_ECOLI (715 aa), 71% identity in
FT                   710 aa overlap"
FT                   /note="Orthologue of E. coli ldcC (DCLZ_ECOLI); Fasta hit
FT                   to DCLZ_ECOLI (713 aa), 91% identity in 712 aa overlap"
FT                   /db_xref="GOA:Q8Z998"
FT                   /db_xref="HSSP:1C4K"
FT                   /db_xref="InterPro:IPR000310"
FT                   /db_xref="InterPro:IPR005308"
FT                   /db_xref="InterPro:IPR008286"
FT                   /db_xref="InterPro:IPR011193"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z998"
FT                   /protein_id="CAD08693.1"
FT                   /translation="MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLKF
FT                   IEHNPRICGVIFDWDEYSLDLCSEINQLNEYLPLYAFINTNSTLDVSVHDMRMALWFFE
FT                   YALGLAEDIATRIHQYTNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTVYQKSPP
FT                   GCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTST
FT                   SNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPKREFT
FT                   RDSIARKVAETAQAQWPVHAVITNSTYDGLLYNTNWIKQMLDVPSIHFDSAWVPYTHFH
FT                   PIYQGKSGMSGDRVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTST
FT                   SPSYPIVASIETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEE
FT                   VDEAECWPVTPGETWHGFTDADDDHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKF
FT                   LDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAE
FT                   DPDFYRNMRIQDLAQGIHKLIRQHDLPELMLRAFEVLPEMIMTPHQAWQRQIKGEVETV
FT                   ALDQLPGRVSANMILPYPPGVPLLMPGERITQQSRAVLDFLLMLCSIGQHYPGFETDIH
FT                   GAKRNEDGVYQVRVLKHAC"
FT   misc_feature    22994..24733
FT                   /note="Pfam match to entry PF01276 OKR_DC_1, Orn/Lys/Arg
FT                   decarboxylase, score 1176.40, E-value 0"
FT   misc_feature    23696..23740
FT                   /note="PS00703 Orn/Lys/Arg decarboxylases family 1
FT                   pyridoxal-P attachment site"
FT   CDS             24810..25199
FT                   /transl_table=11
FT                   /gene="STY0260"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli YAER_ECOLI; Fasta hit to
FT                   YAER_ECOLI (129 aa), 88% identity in 129 aa overlap"
FT                   /db_xref="InterPro:IPR004360"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z997"
FT                   /protein_id="CAD08694.1"
FT                   /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFDLLSEAWREERDSWK
FT                   GDLALNGQYVIELFSFPFPPARPSRPEACGLRHLAFSVENVENAVAHLEKHQVKCEPIR
FT                   IDPYTGKRFTFFNDPDGLPLELYEQ"
FT   CDS             25262..26554
FT                   /transl_table=11
FT                   /gene="STY0261"
FT                   /gene_synonym="mesJ"
FT                   /product="cell cycle protein MesJ"
FT                   /note="Orthologue of E. coli mesJ (MESJ_ECOLI); Fasta hit
FT                   to MESJ_ECOLI (432 aa), 76% identity in 427 aa overlap"
FT                   /db_xref="GOA:Q8Z996"
FT                   /db_xref="InterPro:IPR011063"
FT                   /db_xref="InterPro:IPR012094"
FT                   /db_xref="InterPro:IPR012795"
FT                   /db_xref="InterPro:IPR012796"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR015262"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z996"
FT                   /protein_id="CAD08695.1"
FT                   /translation="MTTLTLNTSLLSSRRILAAFSGGLDSTVLLHQLVLWRERHPDVTL
FT                   RAIHIHHGLSPHADSWVRHCETVCERWQVPLVVERVTLADNGLGIEAHAREARYRAFAQ
FT                   TLLPGEVLATAQHLDDQCETFLLALKRGSGPAGLSAMGERSPFAGTLLLRPLLRETRKT
FT                   LEQWAVRHGLCWIEDESNQDDAYDRNFLRLRALPLLQQRWPHFPAAVARSATLCAEQER
FT                   LLDELLASDLTDCITTEGTLRLSPLMSMSDVRRAAILRRWLAMRNAPMPSRDALERIWQ
FT                   EVALARDDASPCLRFGDHEIRRYQSQLWWIKTVAGQHETTVAWPVWQTPLALPAGLGTV
FT                   QLVPGGELRRPREEESVSIRFKAPGLLHIVGRHGGRKLKKIWQEQGIPPWRRDTTPLLF
FT                   YGETLIAAAGVFVTREGAAEDKEGVSLVWHA"
FT   CDS             complement(26638..26892)
FT                   /transl_table=11
FT                   /gene="STY0262"
FT                   /gene_synonym="rof"
FT                   /product="ROF protein"
FT                   /note="Orthologue of E. coli yaeO (ROF_ECOLI); Fasta hit to
FT                   ROF_ECOLI (84 aa), 81% identity in 84 aa overlap"
FT                   /db_xref="InterPro:IPR009778"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z995"
FT                   /protein_id="CAD08696.1"
FT                   /translation="MNETYQPINCDDYDSLELACMHHLILTLTLKDGEVLQAKANDLIL
FT                   RKNVEYLLAEVSGESCELRLDKIASFSHPEIGTVVVSES"
FT   CDS             complement(26885..27103)
FT                   /transl_table=11
FT                   /gene="yaeP"
FT                   /gene_synonym="STY0263"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Escherichia coli hypothetical 7.2 kDa
FT                   protein in mesj-cutf intergenic region yaeP SW:YAEP_ECOLI
FT                   (P52099) (66 aa) fasta scores: E(): 1.2e-23, 92.4% id in 66
FT                   aa"
FT                   /db_xref="InterPro:IPR009624"
FT                   /db_xref="UniProtKB/Swiss-Prot:P67552"
FT                   /protein_id="CAD08697.1"
FT                   /translation="MLTGGHVEKYCELVRKRYAEIASGDLGYVPDALGCVLKVLNEVAA
FT                   DSALSESVREKAAYAAANLLVSDYVNE"
FT   CDS             27283..27828
FT                   /transl_table=11
FT                   /gene="STY0264"
FT                   /gene_synonym="yaeQ"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yaeQ (YAEQ_ECOLI); Fasta hit
FT                   to YAEQ_ECOLI (181 aa), 89% identity in 181 aa overlap"
FT                   /db_xref="InterPro:IPR009822"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1S7"
FT                   /protein_id="CAD08698.1"
FT                   /translation="MALKATIYKAVVNVADLDRNRFLDAALTLARHPSETQERMMLRLL
FT                   AWIKYADERLQFTRGLSAEDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQASDVAL
FT                   FAYNSRAAQIWWQQHQSKCAQFANLSVWYLDDGQLAQLSEFADRTMTLQATIQDGAIWL
FT                   SDARNNLEIQLTAWQQPS"
FT   misc_feature    27825..28220
FT                   /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA
FT                   hydrolase domain, score 118.70, E-value 1.1e-31"
FT   CDS             27825..28247
FT                   /transl_table=11
FT                   /gene="STY0265"
FT                   /gene_synonym="yaeJ"
FT                   /product="putative release factor"
FT                   /note="Similar to Escherichia coli hypothetical 15.6 kDa
FT                   protein in mesj-cutf intergenic region yaeJ SW:YAEJ_ECOLI
FT                   (P40711) (140 aa) fasta scores: E(): 0, 84.6% id in 136 aa,
FT                   and to Pseudomonas putida hypothetical 15.2 kDa protein in
FT                   pcaj 3'region SW:YAEJ_PSEPU (P45388) (137 aa) fasta scores:
FT                   E(): 9.5e-27, 57.0% id in 135 aa and to Salmonella
FT                   typhimurium peptide chain release factor 2 prfB
FT                   SW:RF2_SALTY (P28353) (365 aa) fasta scores: E(): 0.45,
FT                   29.6% id in 108 aa"
FT                   /note="Orthologue of E. coli yaeJ (YAEJ_ECOLI); Fasta hit
FT                   to YAEJ_ECOLI (140 aa), 85% identity in 136 aa overlap"
FT                   /db_xref="GOA:Q8Z994"
FT                   /db_xref="InterPro:IPR000352"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z994"
FT                   /protein_id="CAD08699.1"
FT                   /translation="MIAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRA
FT                   SGLPEYYKQRLLTASHHLISDDGVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKS
FT                   RRATRPTRASKERRLSSKAQKSSVKALRGKIRRPLD"
FT   misc_feature    27885..27935
FT                   /note="PS00745 Prokaryotic-type class I peptide chain
FT                   release factors signature"
FT   CDS             28279..28980
FT                   /transl_table=11
FT                   /gene="STY0266"
FT                   /gene_synonym="cutF"
FT                   /product="copper homeostasis protein CutF precursor
FT                   (lipoprotein nlpE)"
FT                   /note="Orthologue of E. coli CutF (CUTF_ECOLI); Fasta hit
FT                   to CUTF_ECOLI (236 aa), 76% identity in 232 aa overlap.
FT                   Contains probable N-terminal signal sequence and
FT                   appropriately positioned PS00013 Prokaryotic membrane
FT                   lipoprotein lipid attachment site"
FT                   /db_xref="GOA:Q9F2C2"
FT                   /db_xref="InterPro:IPR007298"
FT                   /db_xref="UniProtKB/TrEMBL:Q9F2C2"
FT                   /protein_id="CAD08700.1"
FT                   /translation="MVRTAILSVAAACTLFALIGCNNRAEVDALQPAQAAELKPMQQSW
FT                   RGVLPCADCEGIETSLFLEKDGTWVMNERYQGVREEPSSFASYGTWARTADKLVLTDSN
FT                   GEKSYYRAKGNALEMLDREGNPVASQLNYTLVPVTASLPVTPMPLRGMYVYRADAATFT
FT                   DCATGKRLPVASNAQLERGYLAAKGEAEKPVLLTVEGHFVFAANPDTGEPVKTLIADKN
FT                   VKFAPGKDCTH"
FT   misc_feature    28309..28341
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   repeat_region   complement(28979..29698)
FT                   /note="IS200"
FT   CDS             complement(29088..29546)
FT                   /transl_table=11
FT                   /gene="tnpA"
FT                   /gene_synonym="STY0267"
FT                   /product="transposase for insertion sequence element IS200"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi transposase for insertion sequence element IS200 tnpA
FT                   SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 99.3%
FT                   id in 152 aa"
FT                   /db_xref="GOA:Q7WRV2"
FT                   /db_xref="InterPro:IPR002686"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WRV2"
FT                   /protein_id="CAD08701.1"
FT                   /translation="MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLC
FT                   EWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNRE
FT                   FWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSLFTGRK"
FT   misc_feature    complement(29181..29492)
FT                   /note="Pfam match to entry PF01797 Transposase_17,
FT                   Transposase IS200 like, score 244.30, E-value 1.7e-69"
FT   CDS             complement(29765..31483)
FT                   /transl_table=11
FT                   /gene="STY0269"
FT                   /gene_synonym="proS"
FT                   /product="prolyl-tRNA synthetase"
FT                   /note="Orthologue of E. coli proS (SYP_ECOLI); Fasta hit to
FT                   SYP_ECOLI (572 aa), 95% identity in 572 aa overlap"
FT                   /db_xref="GOA:Q8XEY9"
FT                   /db_xref="InterPro:IPR002314"
FT                   /db_xref="InterPro:IPR002316"
FT                   /db_xref="InterPro:IPR004154"
FT                   /db_xref="InterPro:IPR004500"
FT                   /db_xref="InterPro:IPR006195"
FT                   /db_xref="InterPro:IPR007214"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8XEY9"
FT                   /protein_id="CAD08702.1"
FT                   /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPT
FT                   GLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPF
FT                   VLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSF
FT                   HTSQESLQETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIV
FT                   FSDVSDYAANIELAEAIAPQTPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTL
FT                   LVKAVKDSKSPLVALLVRGDHELNEVKAEKLPHVASPLTFATEEEIRAVINAGPGSLGP
FT                   VNMPIPVIIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPVVADIRNVVAGDPSPDG
FT                   QGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQ
FT                   NFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKERPG
FT                   VMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVKAIKG"
FT   misc_feature    complement(29819..31099)
FT                   /note="Pfam match to entry PF00587 tRNA-synt_2b, tRNA
FT                   synthetase class II (G, H, P, S and T), score 312.60,
FT                   E-value 4.6e-90"
FT   misc_feature    complement(31007..31069)
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1"
FT   CDS             complement(31594..32301)
FT                   /transl_table=11
FT                   /gene="STY0270"
FT                   /gene_synonym="yaeB"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yaeB (YAEB_ECOLI); Fasta hit
FT                   to YAEB_ECOLI (235 aa), 89% identity in 235 aa overlap"
FT                   /db_xref="InterPro:IPR001378"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z993"
FT                   /protein_id="CAD08703.1"
FT                   /translation="MSSFQFDQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQA
FT                   DAVRGLEAFSHLWVLFVFHQTMDGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSL
FT                   VALKGIECRKESVILKLGSLDLVDGTPVVDIKPYLPFAEALPDAAASYAQQAPIAEMPV
FT                   SFTAEVAQQLTTLERRYPQLRTFICDVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRV
FT                   VNTGFEVFALEPR"
FT   misc_feature    complement(31870..32250)
FT                   /note="Pfam match to entry PF01980 UPF0066, Uncharacterised
FT                   protein family UPF0066, score 281.10, E-value 1.4e-80"
FT   misc_feature    complement(32008..32043)
FT                   /note="PS01318 Uncharacterized protein family UPF0066
FT                   signature"
FT   CDS             complement(32298..32702)
FT                   /transl_table=11
FT                   /gene="STY0271"
FT                   /gene_synonym="rcsF"
FT                   /product="RcsF protein"
FT                   /note="Orthologue of E. coli rcsF (RCSF_ECOLI); Fasta hit
FT                   to RCSF_ECOLI (133 aa), 89% identity in 134 aa overlap"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XEN9"
FT                   /protein_id="CAD08704.1"
FT                   /translation="MRALPICLLALMLGGCSMLSRSPVEPVQSTATPPKAEPEKPKAPR
FT                   AAPVRIYTNAEDLVGKPFRDLGEVSGESCQATNQDSPPNIPTARKRMQINASKMKANAV
FT                   LLHSCEITSGTPGCYRQAVCIGSALNISAK"
FT   misc_feature    complement(32655..32687)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             complement(32821..33636)
FT                   /transl_table=11
FT                   /gene="STY0272"
FT                   /gene_synonym="yaeC"
FT                   /product="putative lipoprotein precursor"
FT                   /note="Similar to Escherichia coli putative lipoprotein
FT                   YaeC precursor yaeC SW:YAEC_ECOLI (P28635) (271 aa) fasta
FT                   scores: E(): 0, 96.3% id in 271 aa, and to Escherichia coli
FT                   lipoprotein-28 precursor nlpA SW:NLPA_ECOLI (P04846) (272
FT                   aa) fasta scores: E(): 0, 62.2% id in 267 aa, and to
FT                   Pasteurella haemolytica outer membrane lipoprotein 3
FT                   precursor plpC SW:PLPC_PASHA (Q08870; Q07365) (263 aa)
FT                   fasta scores: E(): 0, 63.3% id in 267 aa, and to Legionella
FT                   pneumophila 29 kDa immunogenic protein TR:O69441
FT                   (EMBL:AJ005668) (259 aa) fasta scores: E(): 0, 46.5% id in
FT                   258 aa"
FT                   /note="Fasta hit to NLPA_ECOLI (272 aa), 62% identity in
FT                   267 aa overlap"
FT                   /note="Orthologue of E. coli yaeC (YAEC_ECOLI); Fasta hit
FT                   to YAEC_ECOLI (271 aa), 96% identity in 271 aa overlap"
FT                   /db_xref="GOA:Q8Z992"
FT                   /db_xref="InterPro:IPR004478"
FT                   /db_xref="InterPro:IPR004872"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z992"
FT                   /protein_id="CAD08705.1"
FT                   /translation="MAFKFKTFAAVGALIGSLALAGCGQDEKDPNHIKVGVIVGAEQQV
FT                   AEVAQKVAKEKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQIKDRGYKLV
FT                   SVGKTFVYPIAGYSKKIKSLDELKDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVSL
FT                   LPTSLDIVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVED
FT                   KDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
FT   misc_feature    complement(33568..33600)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             complement(33675..34313)
FT                   /transl_table=11
FT                   /gene="STY0273"
FT                   /gene_synonym="yaeE"
FT                   /product="putative ABC transporter permease protein"
FT                   /note="Orthologue of E. coli yaeE (YAEE_ECOLI); Fasta hit
FT                   to YAEE_ECOLI (217 aa), 93% identity in 217 aa overlap"
FT                   /db_xref="GOA:Q8Z991"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z991"
FT                   /protein_id="CAD08706.1"
FT                   /translation="MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENA
FT                   RLYRSLSAVVNIFRSIPFIILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAPFIARIVE
FT                   NALLEIPAGLIEASRAMGATPLQIVRKILLPEALPGLVNAATITLITLVGYSAMGGAVG
FT                   AGGLGQIGYQYGYIGYNATVMNTVLVLLVVLVYLIQLSGDRIVRAVTHK"
FT   misc_feature    complement(33786..33998)
FT                   /note="Pfam match to entry PF00528 BPD_transp,
FT                   Binding-protein-dependent transport systems inner membrane
FT                   component, score 63.80, E-value 3.7e-15"
FT   misc_feature    complement(33909..33995)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp sign."
FT   CDS             complement(34321..35352)
FT                   /transl_table=11
FT                   /gene="STY0274"
FT                   /gene_synonym="abc"
FT                   /product="putative ABC transporter ATP-binding protein"
FT                   /note="Fasta hit to DPPD_ECOLI (327 aa), 30% identity in
FT                   286 aa overlap"
FT                   /note="Fasta hit to POTA_ECOLI (378 aa), 33% identity in
FT                   303 aa overlap"
FT                   /note="Fasta hit to MODC_ECOLI (352 aa), 30% identity in
FT                   290 aa overlap"
FT                   /note="Fasta hit to DPPF_ECOLI (334 aa), 34% identity in
FT                   294 aa overlap"
FT                   /note="Orthologue of E. coli abc (ABC_ECOLI); Fasta hit to
FT                   ABC_ECOLI (343 aa), 95% identity in 343 aa overlap"
FT                   /db_xref="GOA:Q8Z990"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR012692"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR017908"
FT                   /db_xref="InterPro:IPR018449"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z990"
FT                   /protein_id="CAD08707.1"
FT                   /translation="MIKLSNITKVFQQGARTIQALNNVSLHVPAGQIYGVIGASGAGKS
FT                   TLIRCVNLLERPTEGSVMVGGQELTTLSESGLTKARRQIGMIFQHFNLLSSRTVFGNVA
FT                   LPLELDNTPKEEIKRRVTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLL
FT                   CDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQ
FT                   DTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQARLKASPETDSVPMLRMEFTGQSVDAP
FT                   LLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQEETQAAIAWLQDHHVKVEVL
FT                   GYV"
FT   misc_feature    complement(34702..35262)
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 253.90, E-value 2.2e-72"
FT   misc_feature    complement(34888..34932)
FT                   /note="PS00211 ABC transporters family signature"
FT   misc_feature    complement(35218..35241)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             35542..36108
FT                   /transl_table=11
FT                   /gene="STY0275"
FT                   /gene_synonym="yaeD"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Escherichia coli hypothetical 21.3 kDa
FT                   protein in ABC-rrsh intergenic region yaeD SW:YAED_ECOLI
FT                   (P31546) (191 aa) fasta scores: E(): 0, 94.7% id in 188 aa,
FT                   and to Escherichia coli histidine biosynthesis bifunctional
FT                   protein HisB [includes: histidinol-phosphatase hisB
FT                   SW:HIS7_ECOLI (P06987; P78077) (355 aa) fasta scores: E():
FT                   8.1e-11, 34.2% id in 146 aa"
FT                   /note="Orthologue of E. coli yaeD (YAED_ECOLI); Fasta hit
FT                   to YAED_ECOLI (191 aa), 95% identity in 188 aa overlap"
FT                   /db_xref="GOA:Q8Z989"
FT                   /db_xref="InterPro:IPR004446"
FT                   /db_xref="InterPro:IPR005834"
FT                   /db_xref="InterPro:IPR006543"
FT                   /db_xref="InterPro:IPR006549"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z989"
FT                   /protein_id="CAD08708.1"
FT                   /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDAFEFIDGVIDAMRELKKM
FT                   GYALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSIEEFR
FT                   QVCDCRKPHPGMLISARDFLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKPVTA
FT                   EAENAADWVLNSLADLPSAIKKQQK"
FT   rRNA            36479..38020
FT                   /gene="16S_rRNA"
FT                   /note="hit to 16S_rRNA 1..1542 score: 7406 percent id:
FT                   97.92"
FT   tRNA            38106..38181
FT                   /note="tRNA Glu anticodon TTC, Cove score 59.80"
FT   rRNA            38375..41380
FT                   /gene="23S_rRNA"
FT                   /note="hit to 23S_rRNA 1..540 score: 2601 percent id:
FT                   97.96"
FT   rRNA            41481..41600
FT                   /gene="5S_rRNA"
FT                   /note="hit to 5S_rRNA 1..120 score: 582 percent id: 98.33"
FT   tRNA            41653..41729
FT                   /note="tRNA Asp anticodon GTC, Cove score 92.84"
FT   CDS             41894..42697
FT                   /transl_table=11
FT                   /gene="yafB"
FT                   /gene_synonym="STY0276"
FT                   /product="hypothetical oxidoreductase"
FT                   /note="Similar to Escherichia coli hypothetical
FT                   oxidoreductase in aspu-mltd intergenic region yafB
FT                   SW:YAFB_ECOLI (P30863; P77777) (267 aa) fasta scores: E():
FT                   0, 91.0% id in 267 aa, and to Corynebacterium SP
FT                   2,5-diketo-D-gluconic acid reductase TR:P06632
FT                   (EMBL:M12799) (278 aa) fasta scores: E(): 0, 42.0% id in
FT                   255 aa"
FT                   /note="Fasta hit to YQHE_ECOLI (275 aa), 38% identity in
FT                   256 aa overlap"
FT                   /note="Orthologue of E. coli yafB (YAFB_ECOLI); Fasta hit
FT                   to YAFB_ECOLI (267 aa), 91% identity in 267 aa overlap"
FT                   /db_xref="GOA:Q8Z988"
FT                   /db_xref="InterPro:IPR001395"
FT                   /db_xref="InterPro:IPR018170"
FT                   /db_xref="InterPro:IPR020471"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z988"
FT                   /protein_id="CAD08709.1"
FT                   /translation="MTIPAFGLGTFRLKDDVVIASVKTALELGYRAVDTAQIYDNEAAV
FT                   GQAIAESGVPRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWPSPGDA
FT                   VSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQNRK
FT                   VVDWAKAHGIHITSYMTLAYGKALKDEVIARIAVKHNATPVQVILAWAMGEGYSVIPSS
FT                   TRRENLASNLLAQDLHLDAEDKNAIAALDCNDRLVSPEGLAPAWD"
FT   misc_feature    41900..42658
FT                   /note="Pfam match to entry PF00248 aldo_ket_red, Aldo/keto
FT                   reductase family, score 391.70, E-value 7.4e-114"
FT   misc_feature    41978..42031
FT                   /note="PS00798 Aldo/keto reductase family signature 1"
FT   misc_feature    42233..42286
FT                   /note="PS00062 Aldo/keto reductase family signature 2"
FT   CDS             complement(42718..43632)
FT                   /transl_table=11
FT                   /gene="yafC"
FT                   /gene_synonym="STY0277"
FT                   /product="hypothetical transcriptional regulator"
FT                   /note="Similar to Escherichia coli hypothetical
FT                   transcriptional regulator in aspu-mltd intergenic region
FT                   yafC SW:YAFC_ECOLI (P30864) (304 aa) fasta scores: E(): 0,
FT                   89.8% id in 303 aa, and to Neisseria meningitidis
FT                   transcriptional regulator crgA TR:AAF37819 (EMBL:AF190471)
FT                   (299 aa) fasta scores: E(): 0, 62.9% id in 291 aa, and to
FT                   Pseudomonas aeruginosa transcriptional activator PtxR ptxR
FT                   TR:O30374 (EMBL:AF002222) (312 aa) fasta scores: E():
FT                   2.2e-25, 32.1% id in 293 aa"
FT                   /note="Fasta hit to YCAN_ECOLI (302 aa), 30% identity in
FT                   296 aa overlap"
FT                   /note="Fasta hit to YHCS_ECOLI (309 aa), 33% identity in
FT                   290 aa overlap"
FT                   /note="Fasta hit to GCVA_ECOLI (305 aa), 30% identity in
FT                   281 aa overlap"
FT                   /note="Fasta hit to YEAT_ECOLI (307 aa), 34% identity in
FT                   289 aa overlap"
FT                   /note="Orthologue of E. coli yafC (YAFC_ECOLI); Fasta hit
FT                   to YAFC_ECOLI (304 aa), 90% identity in 303 aa overlap"
FT                   /db_xref="GOA:Q8Z987"
FT                   /db_xref="InterPro:IPR000847"
FT                   /db_xref="InterPro:IPR005119"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z987"
FT                   /protein_id="CAD08710.1"
FT                   /translation="MKATSEELAIFVAVVESGSFSRAAEQLGQANSAVSRAVKKLEMKL
FT                   GVSLLNRTTRQLSLTEEGERYFRRVQQILQEMAAAETEIMESRNTPRGLLRIDAATPVM
FT                   LHFLMPLIKPFRERYPEITLSLVSSETFINLIERKVDVAIRAGTLTDSSLRARPLFTSY
FT                   RKVIASPDYIARFGKPESVEELKQHLCLGFSEPISLNTWPIACSDGQLHEIECGISSNS
FT                   GETLKQLCLNGNGIACLSDYMIDKEIARGELVELLADKRLPVEMPFSAVYYSDRAVSTR
FT                   IRAFIDFLSEYIRTAPAGAVKEG"
FT   misc_feature    complement(43201..43620)
FT                   /note="Pfam match to entry PF00126 HTH_1, Bacterial
FT                   regulatory helix-turn-helix protein, lysR family, score
FT                   184.00, E-value 2.3e-51"
FT   misc_feature    complement(43486..43578)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature"
FT   CDS             43737..44912
FT                   /transl_table=11
FT                   /gene="STY0278"
FT                   /product="putative drug efflux protein"
FT                   /note="Similar to Bacillus subtilis YtbD TR:O34367
FT                   (EMBL:AF008220) (396 aa) fasta scores: E(): 0, 52.8% id in
FT                   381 aa, and to Escherichia coli from bases 1733307 to
FT                   1744339 TR:P77389 (EMBL:AE000261) (389 aa) fasta scores:
FT                   E(): 0, 41.8% id in 378 aa, and to Streptomyces violaceus
FT                   chloramphenicol resistance protein CmlV TR:Q56147
FT                   (EMBL:U09991) (436 aa) fasta scores: E(): 0, 37.0% id in
FT                   386 aa, and to Corynebacterium striatum chloramphenicol
FT                   export protein cmx TR:O30996 (EMBL:AF024666) (391 aa) fasta
FT                   scores: E(): 0, 33.4% id in 389 aa, and to Escherichia coli
FT                   araJ protein SW:ARAJ_ECOLI (P23910) (394 aa) fasta scores:
FT                   E(): 0, 31.2% id in 378 aa"
FT                   /note="Fasta hit to YDEA_ECOLI (396 aa), 31% identity in
FT                   372 aa overlap"
FT                   /note="Fasta hit to ARAJ_ECOLI (394 aa), 31% identity in
FT                   378 aa overlap"
FT                   /note="Fasta hit to P77389 (389 aa), 42% identity in 378 aa
FT                   overlap"
FT                   /db_xref="GOA:Q8Z986"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="InterPro:IPR016196"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z986"
FT                   /protein_id="CAD08711.1"
FT                   /translation="MPLALFALTISAFAIGTTEFVIVGLVPTIAQQLAVSLPSAGMLVL
FT                   IYALGVAIGAPVLTALTGRLPRKQLLVALMVLFTAGNLLAWQAPGYMTLIAARLLTGLA
FT                   HGVFFSIGSTIATSLVPKEKAASAIAIMFGGLTVALVTGVPLGTFIGQHFGWRETFLAV
FT                   SLLGVIALMSSQLLIPANIPGRAAASIRDQVKVLTHPRLLLIYAVTALGYGGVFTAFTF
FT                   LAPMMQDLAGFSPAAVSWILLGYGVSVAIGNIWGGKLADKHGAVPALKFIFAALFVLLM
FT                   VFQVTASTQYAALATILVMGIFAFGNVPGLQVYVVQKAEQFTPNAVDVASGLNIAAFNI
FT                   GIALGSVIGGQTVAHYGLAQTPWIGALIVLVAFLLMGVSGRLDKPVRIALE"
FT   misc_feature    43743..44903
FT                   /note="Pfam match to entry PF00083 sugar_tr, Sugar (and
FT                   other) transporter, score -76.30, E-value 0.00039"
FT   CDS             45065..45844
FT                   /transl_table=11
FT                   /gene="STY0279"
FT                   /gene_synonym="yafD"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yafD (YAFD_ECOLI); Fasta hit
FT                   to YAFD_ECOLI (259 aa), 97% identity in 259 aa overlap"
FT                   /db_xref="GOA:Q8Z985"
FT                   /db_xref="InterPro:IPR005135"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z985"
FT                   /protein_id="CAD08712.1"
FT                   /translation="MRYVAGQPAERILPLGSFASIGQALPAGEPLSSEERIRILVWNIF
FT                   KQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFVLPQHPSGVM
FT                   TLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYSKQ
FT                   LLPIGDQIAHHSGPVIMAGDFNAWSRPRMNALYRFAREMSLRQVRFTDDQRRRAFGRPL
FT                   DFVFYRGLNVNEASVLVTRASDHNPLLVEFSPGKPEQ"
FT   CDS             45922..46692
FT                   /transl_table=11
FT                   /gene="yafE"
FT                   /gene_synonym="STY0280"
FT                   /product="putative methyltransferase"
FT                   /note="Similar to Escherichia coli hypothetical 23.0 kDa
FT                   protein in aspu-mltd intergenic region yafE SW:YAFE_ECOLI
FT                   (P30866) (207 aa) fasta scores: E(): 0, 71.1% id in 204 aa,
FT                   and to Lactococcus lactis probable menaquinone biosynthesis
FT                   methyltransferase SW:GRCB_LACLA (P49016) (252 aa) fasta
FT                   scores: E(): 6.3e-13, 28.4% id in 190 aa, and to
FT                   Micrococcus luteus 2-hexaprenyl-1,4-naphthoquinone
FT                   methyltransferase menG TR:O66128 (EMBL:AB003188) (246 aa)
FT                   fasta scores: E(): 6e-10, 28.6% id in 185 aa"
FT                   /db_xref="GOA:Q8Z984"
FT                   /db_xref="InterPro:IPR013216"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z984"
FT                   /protein_id="CAD08713.1"
FT                   /translation="MTTHSHHDNVEKQFGSQANAYLHSAVHAAGRDLARLAQRLSDFSH
FT                   ASVLDMGCGAGHASFVAAQHVNSVVAYDLSASMLEVVAGAAEERHLSNITLRQGYAEKL
FT                   PFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMDVMSPGHPVRDIWLQTV
FT                   EALRDTSHVRNYSSGEWLAMVNNAMLVTNTVITDRLSLEFRSWVTRMRTPAPLVEAIRL
FT                   YQASAPVEVKRYFELQDDGSFSSDTIMLEAHKAV"
FT   misc_feature    45925..46548
FT                   /note="Pfam match to entry PF01209 Ubie_methyltran,
FT                   ubiE/COQ5 methyltransferase family, score -79.10, E-value
FT                   3.5e-06"
FT   CDS             complement(46748..48115)
FT                   /transl_table=11
FT                   /gene="mltD"
FT                   /gene_synonym="STY0281"
FT                   /product="membrane-bound lytic murein transglycosylase d
FT                   precursor"
FT                   /EC_number="3.2.1.-"
FT                   /note="Similar to Escherichia coli membrane-bound lytic
FT                   murein transglycosylase d precursor mltd or dniR
FT                   SW:MLTD_ECOLI (P23931; P32982; P77350) (452 aa) fasta
FT                   scores: E(): 0, 91.4% id in 455 aa, and to Neisseria
FT                   meningitidis |+++ unknown: ox in cab84739 +++| putative
FT                   membrane bound murein transglycosylase TR:CAB84739
FT                   (EMBL:AL162756) (658 aa) fasta scores: E(): 4.4e-32, 35.2%
FT                   id in 341 aa, and to Bacteriophage phi-LC3 LysB lysB
FT                   TR:Q37969 (EMBL:U04309) (429 aa) fasta scores: E():
FT                   3.9e-06, 30.4% id in 161 aa"
FT                   /note="Orthologue of E. coli dniR (MLTD_ECOLI); Fasta hit
FT                   to MLTD_ECOLI (452 aa), 91% identity in 455 aa overlap"
FT                   /db_xref="GOA:Q8XFM2"
FT                   /db_xref="HSSP:1E0G"
FT                   /db_xref="InterPro:IPR000189"
FT                   /db_xref="InterPro:IPR002482"
FT                   /db_xref="InterPro:IPR008258"
FT                   /db_xref="InterPro:IPR010511"
FT                   /db_xref="InterPro:IPR018392"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFM2"
FT                   /protein_id="CAD08714.1"
FT                   /translation="MKAKAILLASVLLVGCQTSQNTGNVQQHAQSLSAAGQGEAGKFTS
FT                   QARWMDDGTSIAPDQDLWAFIGDELKMGIPENSRIREQKQKYLRNKSYLHDVTLRAEPY
FT                   MYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
FT                   DARRDVVASTTAALDMMQRLNKMFDGDWLLTVAAYNSGEGRVMRAIKANKARGKPTDFW
FT                   SLSLPRETKLYVPKMLALSEILKNSKRYGVRLPTTDESRALARVRLNSPVEMAQVADMA
FT                   GMSISKLKTFNAGVKGSTLGVSGPQYVMVPKKHAEQLRESLASGEIDAVQSQLIADNTP
FT                   LNSRSYKVRSGDTLSGIASRLGVSTKDLQQWNNLRGSRLKIGQSLTVGAGSSAQRLANN
FT                   SDSITYRVRKGDSLSSIARRHGVNIKDVMRWNHDTDNLQPGDQLTLFVKDNSTPDS"
FT   misc_feature    complement(46778..46903)
FT                   /note="Pfam match to entry PF01476 PG_binding_2, Putative
FT                   peptidoglycan binding domain, score 52.90, E-value 6.9e-12"
FT   misc_feature    complement(46952..47080)
FT                   /note="Pfam match to entry PF01476 PG_binding_2, Putative
FT                   peptidoglycan binding domain, score 67.90, E-value 2.1e-16"
FT   misc_feature    complement(47453..47803)
FT                   /note="Pfam match to entry PF01464 SLT, Transglycosylase
FT                   SLT domain, score 136.40, E-value 5e-37"
FT   misc_feature    complement(47660..47746)
FT                   /note="PS00922 Prokaryotic transglycosylases signature"
FT   misc_feature    complement(48068..48100)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             complement(48187..48942)
FT                   /transl_table=11
FT                   /gene="gloB"
FT                   /gene_synonym="STY0282"
FT                   /product="probable hydroxyacylglutathione hydrolase"
FT                   /EC_number="3.1.2.6"
FT                   /note="Similar to Escherichia coli probable
FT                   hydroxyacylglutathione hydrolase gloB SW:GLO2_ECOLI
FT                   (Q47677) (251 aa) fasta scores: E(): 0, 78.1% id in 251 aa"
FT                   /note="Orthologue of E. coli GLO2_ECOLI; Fasta hit to
FT                   GLO2_ECOLI (251 aa), 78% identity in 251 aa overlap"
FT                   /db_xref="GOA:Q8Z983"
FT                   /db_xref="HSSP:1XM8"
FT                   /db_xref="InterPro:IPR001279"
FT                   /db_xref="InterPro:IPR017782"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z983"
FT                   /protein_id="CAD08715.1"
FT                   /translation="MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAAHKWM
FT                   PEAIFLTHHHYDHVGGVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL
FT                   FATPGHTLGHVCYFSHPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTLICS
FT                   AHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDI
FT                   DLINEINKETILQQPEARFAWLRSKKDTF"
FT   misc_feature    complement(48448..48924)
FT                   /note="Pfam match to entry PF00753 lactamase_B,
FT                   Metallo-beta-lactamase superfamily, score 177.20, E-value
FT                   2.8e-49"
FT   CDS             48977..49699
FT                   /transl_table=11
FT                   /gene="STY0283"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli YAFS_ECOLI; Fasta hit to
FT                   YAFS_ECOLI (240 aa), 87% identity in 238 aa overlap"
FT                   /db_xref="GOA:Q8Z982"
FT                   /db_xref="InterPro:IPR013216"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z982"
FT                   /protein_id="CAD08716.1"
FT                   /translation="MKPARLSQTVVAPGCWGELPWGNYYREALEQQLNPWFAKMYGFHL
FT                   LKIGNLSAEINSEACAVSHQVNVSSQGSPMQVLADPLHLPFADKSVDVCLLAHTLPWCT
FT                   DPHRLLREADRVLIDDGWLVISGFNPLSLMGLRKLVLVLRKTPPYNSRMFTLMRQLDWL
FT                   SLLNFEVLHYSRFHVLPWKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRHNKSK
FT                   TPIRQTVGATRQYRKPDG"
FT   CDS             complement(49696..50163)
FT                   /transl_table=11
FT                   /gene="STY0284"
FT                   /gene_synonym="rnhA"
FT                   /product="ribonuclease H"
FT                   /note="Orthologue of E. coli rnhA (RNH_ECOLI); Fasta hit to
FT                   RNH_ECOLI (155 aa), 94% identity in 154 aa overlap"
FT                   /db_xref="GOA:P0A2C0"
FT                   /db_xref="InterPro:IPR002156"
FT                   /db_xref="InterPro:IPR012337"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A2C0"
FT                   /protein_id="CAD08717.1"
FT                   /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSEGYTLTTNN
FT                   RMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWKKRGWKTAEKKPVKNVDLW
FT                   KRLDAALGQHQIKWVWVKGHAGHPENERCDELARAAAMNPTQEDSGYQAEA"
FT   misc_feature    complement(49738..50160)
FT                   /note="Pfam match to entry PF00075 rnaseH, RNase H, score
FT                   206.50, E-value 4e-58"
FT   CDS             50227..50958
FT                   /transl_table=11
FT                   /gene="STY0285"
FT                   /gene_synonym="dnaQ"
FT                   /product="DNA polymerase III epsilon subunit"
FT                   /note="Orthologue of E. coli dnaQ (DP3E_ECOLI); Fasta hit
FT                   to DP3E_ECOLI (243 aa), 93% identity in 243 aa overlap"
FT                   /db_xref="GOA:P0A1H0"
FT                   /db_xref="InterPro:IPR006054"
FT                   /db_xref="InterPro:IPR006055"
FT                   /db_xref="InterPro:IPR006309"
FT                   /db_xref="InterPro:IPR012337"
FT                   /db_xref="InterPro:IPR013520"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1H0"
FT                   /protein_id="CAD08718.1"
FT                   /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTG
FT                   NNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDI
FT                   GFMDYEFGLLKRDIPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHG
FT                   ALLDAQILAEVYLAMTGGQTSMTFAMEGETQRQQGEATIQRIVRQASRLRVVFASEEEL
FT                   AAHESRLDLVQKKGGSCLWRA"
FT   misc_feature    50260..50799
FT                   /note="Pfam match to entry PF00929 Exonuclease,
FT                   Exonuclease, score 284.40, E-value 1.4e-81"
FT   tRNA            51092..51168
FT                   /note="tRNA Asp anticodon GTC, Cove score 92.84"
FT   misc_feature    51172..110067
FT                   /note="Salmonella Pathogenicity Island 6 (59 kb)"
FT   CDS             complement(51488..52120)
FT                   /transl_table=11
FT                   /gene="STY0286"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z981"
FT                   /protein_id="CAD08719.1"
FT                   /translation="MADIRGITLSNSAALHLQVRDVERALSAPRPADALAPESVRQQLA
FT                   DLEARGALPLAAFREAQESAERLQVWARETLGDLAPDFSRLRQLLALLPDVVQTTTPEI
FT                   PPSPAPAPAPAGTVMDNAIPARAEDVPPVNAPPGISIPHNAEPGPIRDRNDALERLRCI
FT                   RRWFESSEPSSPTIPLLRQAERLVGKRFSEVINEIPVELLEKWDALE"
FT   CDS             complement(52120..52542)
FT                   /transl_table=11
FT                   /gene="STY0287"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="InterPro:IPR010657"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z980"
FT                   /protein_id="CAD08720.1"
FT                   /translation="MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVS
FT                   TPEAVNWPEIERDARRLLTRSKDIRVLILLLRSRIQQAGAQGLAEMLTQLAELSVIWSD
FT                   ALHPQLLTGEGASAESIEDAALARSNALAARWITKA"
FT   CDS             complement(52553..53548)
FT                   /transl_table=11
FT                   /gene="STY0288"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="InterPro:IPR010732"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z979"
FT                   /protein_id="CAD08721.1"
FT                   /translation="MTGALDQAQKAPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFR
FT                   LGQTPTMTFAPREIAQVSWQDGRLHLSLYSLGLWGPNGPLPLHYTELALNRSESRHDPT
FT                   LVHFSNIFHYRWLTQFWQAWRSGQSAGGGLDKPEHDRFAFYIASISGQDLRESAESPLS
FT                   DHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQS
FT                   SVLGNGALIGQAVPDMQYKFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEYCW
FT                   EIELQLKPHAAPPAVIGGAQRLGWTAWAGKAMHDRPVTGMIFEPEHGLTH"
FT   CDS             complement(53545..55428)
FT                   /transl_table=11
FT                   /gene="STY0289"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="InterPro:IPR010272"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z978"
FT                   /protein_id="CAD08722.1"
FT                   /translation="MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPY
FT                   VERMIEAFSFLSARTQLKIDAEFPRFTQRLLEVVNPNYVTPTPSMAVVKLYPDTQEGDL
FT                   AKGVTVPRDTAFVSPIPEGENTACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHRYLP
FT                   PNIHVAGALRITLRTFGELAFSELAGPARLPFYLCGEERIASHLFELLHTSAVATLAGE
FT                   PGHFDGELNVNLQHPVAHEGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGL
FT                   SAGLQKVQGNVAEIVILLNRLPPDWLIHQTDAAQFSLFCTPVINLFPRTTTRIEVTHSV
FT                   TEQHLVVDRTRPLDYEVFSVQEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRRE
FT                   PRRSSESARRYGTRTPYTGSEVFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRN
FT                   GRDDLTVDAAIPVAGVGLIRPPRPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQ
FT                   ALRDLLNLFIPAHDSPQSRQVRSLIGCKTTPVTRRLPGSGLLVYGRGVSCELTVDEEGF
FT                   SGISPYLFGLVLEHYIARHVSINTFSQMTLHSMQRGHVMTWPVRTGQRGSV"
FT   CDS             complement(55444..55938)
FT                   /transl_table=11
FT                   /gene="STY0290"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Edwardsiella ictaluri putative 18.8 kDa
FT                   protein Eip19 TR:O52404 (EMBL:AF037441) (158 aa) fasta
FT                   scores: E(): 4.1e-07, 31.0% id in 155 aa"
FT                   /db_xref="InterPro:IPR007048"
FT                   /db_xref="InterPro:IPR017737"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z977"
FT                   /protein_id="CAD08723.1"
FT                   /translation="MSTSRFTPANHLLPTLFDRLCDNAPYQKIDRDISVTPVQLKEIIR
FT                   RDLSFLLNTISHEGDIDARRYPQAAASVLNYGLPPLAGSFMYEHKWDDISEAIRRAIIR
FT                   FEPRLNAATLRVTPLLDEARQGSYNTLQFEIRGQILTQPYPTEFLVRSALDMELSRITF
FT                   F"
FT   CDS             complement(55935..56759)
FT                   /transl_table=11
FT                   /gene="STY0291"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="InterPro:IPR009211"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z976"
FT                   /protein_id="CAD08724.1"
FT                   /translation="MKKTDTLPATLSALLQEYSIAEGIQMAEQQVRENPAKALCRHSLF
FT                   QLLCVAGDWARALHQLQLCARMEANYTQEARLYRELVCCEMFRHTVFQGEQRPGFLLPQ
FT                   PVWVESLLAALACHDDTGEVDKHRNTALEAITDTGGQWNGGAFDWASDSDSRLGPVLEL
FT                   VTGGVYIWLPFSQIRSLESPQPTRLTDLLWKPVNITLVNGDTHGAWLFTRYSGSESASD
FT                   ALRLCRETAWQDGPGETTVRALGQKVWLTSHGDISLLDMTHCTFHAQENDGA"
FT   CDS             complement(56746..57648)
FT                   /transl_table=11
FT                   /gene="STY0292"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z975"
FT                   /protein_id="CAD08725.1"
FT                   /translation="MKQDMWELRKIQSQGITDNAQYPAGTYIVFTAAAPYIPLFEQHGK
FT                   DDIALSLVRHEEAWWIVNHSDELCCAVNEQVMEPHHRMRLNDGDTIEWGLSSWCLARTN
FT                   DESRPDVSFPQLVQSSESVAEYLDLDWFKQQQLNPQNPFDIIPVRETAPSYTGHEADST
FT                   LHQLYQEYQQALRPSGQEKPLRPKPFPRNEDAVTQDLTSLYDKKGDTDTLQDMVAGAPG
FT                   IDAILDTLDTTGEGEMHWLAMESMPDILQLLSPEMGGKTAHSEILPDLTRREHRIIGID
FT                   SHYRITPTQKNGNTAHEKN"
FT   CDS             complement(57657..57728)
FT                   /transl_table=11
FT                   /gene="STY0293"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z974"
FT                   /protein_id="CAD08726.1"
FT                   /translation="MNLVKIIYELKLPKRFLQKNKYI"
FT   CDS             58016..60679
FT                   /transl_table=11
FT                   /gene="STY0294"
FT                   /product="ClpB-like protein"
FT                   /note="Similar to Escherichia coli ClpB heat shock protease
FT                   SW:CLPB_ECOLI (P03815) (857 aa) fasta scores: E(): 0, 37.9%
FT                   id in 892 aa"
FT                   /note="Paralogue of E. coli clpB (CLPB_ECOLI); Fasta hit to
FT                   CLPB_ECOLI (857 aa), 38% identity in 892 aa overlap"
FT                   /db_xref="GOA:Q8Z973"
FT                   /db_xref="HSSP:1JBK"
FT                   /db_xref="InterPro:IPR001270"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR003959"
FT                   /db_xref="InterPro:IPR013093"
FT                   /db_xref="InterPro:IPR017729"
FT                   /db_xref="InterPro:IPR018368"
FT                   /db_xref="InterPro:IPR019489"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z973"
FT                   /protein_id="CAD08727.1"
FT                   /translation="METPVSRSALYGKLAGPLFRSLESATAFCKLRSNPWGELTHWLHQ
FT                   LTQQPDNDILHVLRHYQIPLSDVEKALLRQLDMLPAGASAISDFSHHIDLSVEKAWMLA
FT                   SVRYGDNKIRSGWLLLALLTTPELRRVLSSICAPLATLPVDELTEILPSLIETSPEAQE
FT                   RPYDGSGLASAIPGESSQAIPNGVQDGKSALAKYCQDMTAQARDGKIDPVTGREHEIRT
FT                   MTDILLRRRQNNPLLTGEAGVGKTAVVEGFALAIAQGEVPPALREVRLLALDVGALLAG
FT                   ASMKGEFESRLKGLLEEAGRSPQPVILFVDEVHTLVGAGGASGTGDAANLLKPALACGT
FT                   LRTIGATTWSEYKRHIEKDPALTRRFQVLQIAEPEEIPAMEMVRGLVDTLEKHHNVLIL
FT                   DEAVRAAVQLSHRYIPARQLPDKAISLLDTAAVRVALTLHTPPASVQFLRQQLKAAEME
FT                   RSLLQKQEKMGIQSDERCDALTARIFSLNDELTASESRWQRELELVHTLQELRVAESDA
FT                   DDKTTLQQAETALREWQGDAPVVFPEVSAAIVAAIVADWTGIPAGRMVKDEASQVLELP
FT                   ARLAQRVTGQDGALAQIGERIQTARAGLGDPRKPVGVFMLAGPSGVGKTETALALAEAI
FT                   YGGEQNLVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRHPWSVVLLDEIEK
FT                   AHHDVHELFYQVFDKGGMEDGEGTHVDFKNTTLLLTTNVGSDLISQMCEDPALMPDATG
FT                   LKEALMPELRKHFPAAFLGRVTVIPYLPLDETSRGVIARLHLDRLVARMGEQHGVTLTY
FT                   SEELVAHIVACCPMHETGARLLIGYIEQHILPQLSRYWLQAMTEKAAIRQIDIGVNGDE
FT                   QIVFETTSQEGICQKS"
FT   misc_feature    58730..58753
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    58994..59032
FT                   /note="PS00870 Chaperonins clpA/B signature 1"
FT   misc_feature    59867..59890
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             60664..60762
FT                   /transl_table=11
FT                   /gene="STY0295"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z972"
FT                   /protein_id="CAD08728.1"
FT                   /translation="MPKELSGAQWVYGVTKFVGGNTDKPHWSIDGH"
FT   CDS             60765..61055
FT                   /transl_table=11
FT                   /gene="STY0296"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z971"
FT                   /protein_id="CAD08729.1"
FT                   /translation="MTLRDPALLTPLLMMFAFSVHGEPPLPQDVQHFLSNAEMCQHLAG
FT                   EWDSSLPEEDKKDIKKGINTWCPPAKKALPGLREKYKENKEIIKKLSEYDF"
FT   CDS             61119..61661
FT                   /transl_table=11
FT                   /gene="STY0297"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Edwardsiella ictaluri putative 19.5 kDa
FT                   protein Eip20 TR:O52407 (EMBL:AF037441) (170 aa) fasta
FT                   scores: E(): 6.7e-20, 38.7% id in 168 aa, and to
FT                   Escherichia coli hypothetical 18.1 kDa protein 498
FT                   TR:O52670 (EMBL:AF044503) (166 aa) fasta scores: E():
FT                   6e-08, 31.0% id in 142 aa"
FT                   /db_xref="InterPro:IPR008312"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z970"
FT                   /protein_id="CAD08730.1"
FT                   /translation="MAINNSAQKFIARNRAPRVQIEYDVEIYGSEKKIELPFVMAVLAD
FT                   LAGKPREELPPVTDRKFLDIDIDNFNERMKAIAPRVAFAVPNTLTGEGQLMVDITLENM
FT                   DDFSPAQIARKVDALNQLLEARTQLANLQTYMDGKAGAENLVNKLLQDPTLLKTLANAP
FT                   KSAATQQGVSADNESAE"
FT   CDS             61685..63193
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="STY0298"
FT                   /product="conserved hypothetical protein (pseudogene)"
FT                   /note="Similar to Pseudomonas aeruginosa conserved
FT                   hypothetical protein TR:AAG03474 (EMBL:AE004447) (498 aa)
FT                   fasta scores: E(): 0, 71.8% id in 489 aa, and to
FT                   Edwardsiella ictaluri putative 54.5 kDa protein eip55
FT                   TR:O52406 (EMBL:AF037441) (495 aa) fasta scores: E(): 0,
FT                   48.6% id in 500 aa, and to Vibrio cholerae conserved
FT                   hypothetical protein TR:AAF96022 (EMBL:AE004353) (492 aa)
FT                   fasta scores: E(): 0, 39.7% id in 494 aa. Contains an
FT                   in-frame stop codon at aa 47. The sequence has been checked
FT                   and is believed to be correct"
FT   CDS             63246..63647
FT                   /transl_table=11
FT                   /gene="STY0300"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z969"
FT                   /protein_id="CAD08732.1"
FT                   /translation="MPYVYANAKALQDTEKVGNHHQCVELIQHYIRVGQASTWQQGAAV
FT                   FGNKNIEVGTVIATFVNGRYPNHNSGNHAAFFLGQDTGGIWVMDQWKDDIAKPRVSKRY
FT                   IRKLHNGSVRSDGTYIRMSNNAEAYFIVE"
FT   CDS             63619..64044
FT                   /transl_table=11
FT                   /gene="STY0301"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z968"
FT                   /protein_id="CAD08733.1"
FT                   /translation="MQKPILSLNSTCIVGGILWLLPVIVVHADEIVCPAVIHFSQAPII
FT                   SSAEGWNVSSRAARMLNDGGFLSSGDPKEQADLKGEDAVVDGKKGHLWEIDPEDNRRGI
FT                   WFSCSYGQWAVLLARKVQGTVATCWSPDVLPAKLICK"
FT   CDS             64281..64766
FT                   /transl_table=11
FT                   /gene="STY0302"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Edwardsiella ictaluri putative 17.8 kDa
FT                   protein Eip18 TR:O52405 (EMBL:AF037441) (163 aa) fasta
FT                   scores: E(): 2.8e-15, 30.9% id in 162 aa"
FT                   /db_xref="InterPro:IPR008514"
FT                   /db_xref="InterPro:IPR017728"
FT                   /db_xref="UniProtKB/TrEMBL:Q93IS5"
FT                   /protein_id="CAD08734.1"
FT                   /translation="MAYDIFLKIDGIDGESMDDKHKNEIEVLSWRWNIHQESTMHAGSG
FT                   LGSGKVSVTNLDFDHYIDRASPNLFKYCASGKHIPQAILVMRKAGGNPLEYLKYTFTDL
FT                   IVAVVSPSGSHDGEIASRETVELSFSTVKQEYVVQNQQGGSGGTITAGYDFKANKEI"
FT   CDS             64833..65369
FT                   /transl_table=11
FT                   /gene="STY0303"
FT                   /product="probable lipoprotein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence"
FT                   /db_xref="InterPro:IPR017734"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z967"
FT                   /protein_id="CAD08735.1"
FT                   /translation="MNEWRNPTRWLCAVAMPFALLLLSGCGSSDALPDLESQRLDLSVK
FT                   ASDKVNPDNQKKAAPIEIRVYELKNDAAFTTADYWSLHDNDKSVLTDDLVRRDSFILRP
FT                   GEEKKLRRPLNAQTTAIGVLAGYRNLAKSVWRVTYKIPEAPEKAWYSSFIPGKGKVQLE
FT                   AELEQSAIVITERDK"
FT   misc_feature    64878..64910
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             65373..66716
FT                   /transl_table=11
FT                   /gene="STY0304"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar in C-terminus to Vibrio cholerae Z29F
FT                   protein z29F TR:O87035 (EMBL:AJ231091) (105 aa) fasta
FT                   scores: E(): 1.4e-12, 41.4% id in 99 aa"
FT                   /db_xref="InterPro:IPR010263"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z966"
FT                   /protein_id="CAD08736.1"
FT                   /translation="MSWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGF
FT                   SHYNIDGEALNIGKLILKEASGIFPDGTPFNAPDHTPLPPPLTILPEHLNQQICLAVPV
FT                   RAPNSEETTFDNNPESLARFSVHEHDIRDANSLGRGAQLLQLTHLRLRLLPEKAVTGAW
FT                   IGLPLTRITGLNPDGRIDIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLT
FT                   GSDNHGHEAAEVSDYLLLQILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELSTYVRPQ
FT                   TRRPAEYKEYKHLTPYAGLKSLVDEVQFLLNAVLIRGAQRIELKEGTYGILNAVVAPSD
FT                   LADFSTLVLAIKASMPTDVLLQHFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQI
FT                   PFQAGYIYYDIRREGALWEHIARYGGMAMHTAGEFPGLETELWGVRDK"
FT   CDS             66713..68014
FT                   /transl_table=11
FT                   /gene="STY0305"
FT                   /product="putative membrane protein"
FT                   /note="Similar in C-terminus to various proteins including
FT                   Vibrio parahaemolyticus sodium-driven polar flagellar
FT                   protein motB TR:Q9Z6G9 (EMBL:AF069391) (315 aa) fasta
FT                   scores: E(): 4e-08, 33.1% id in 139 aa, and to Bordetella
FT                   avium outer membrane protein a precursor ompA SW:OMPA_BORAV
FT                   (Q05146) (194 aa) fasta scores: E(): 1.8e-07, 36.2% id in
FT                   116 aa"
FT                   /db_xref="GOA:Q8Z965"
FT                   /db_xref="InterPro:IPR006665"
FT                   /db_xref="InterPro:IPR017732"
FT                   /db_xref="InterPro:IPR017733"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z965"
FT                   /protein_id="CAD08737.1"
FT                   /translation="MTDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIVE
FT                   DGPDSKLRLAEISAAANPLLAAARPLLCALAAMPAKLDAALVEPYRNLLVREMHLYQTL
FT                   CDQANLRREHVLAVRYCLCTALDEAANNTTWGRRGVWAGKSLLVTFHGESEGGIKLFQI
FT                   IGRLAASFQEHGNVLEVIYHLLGLGFEGRYSVQPDGRKQLDNIRQQLLTQLSQRRDPVM
FT                   PALSPDFQGAISGRLRRMRRVPVWLSAGIALLAMLTLFGLYSHRMDVQTVTVQQHIDAI
FT                   GIKLPPPVPVHKLRLKILLANEIARGLLTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIR
FT                   PVINKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAG
FT                   RVHIVGKGDTVPVADNGSKAGRAKNRRVEILVVE"
FT   misc_feature    67691..67987
FT                   /note="Pfam match to entry PF00691 OmpA, OmpA family, score
FT                   98.50, E-value 1.3e-25"
FT   CDS             68019..68768
FT                   /transl_table=11
FT                   /gene="STY0306"
FT                   /product="putative membrane protein"
FT                   /note="No database matches; contains one probable
FT                   transmembrane domain"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z964"
FT                   /protein_id="CAD08738.1"
FT                   /translation="MIKKSTYDVSHHSAICGVTGDYYRISATYHIKRSIRVFLIILCCL
FT                   LPGGVFAGSLINAGLISPDNVNLSIRDFLGFYASDNLQEKDNTLMYVLGVADATEGKTW
FT                   CGYGQVDSITINHTVLAWLDRYSVKKPDARASVLIEEALVKNFPCQGTEPSVKIASRSS
FT                   PVLSLTPDALNLSGNDFFKFWVSGNQLDKLRAGIYLLGVEDATEKKLWCGYDLFKTLTL
FT                   NEIVYVFLKIKHIKNLILARLSLLWIN"
FT   misc_feature    68304..68327
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             68800..69294
FT                   /transl_table=11
FT                   /gene="STY0307"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z963"
FT                   /protein_id="CAD08739.1"
FT                   /translation="MKPLFSVLKSNHNSSSFESPDFVDSKDFYAGIGYDQGKLGAQFEN
FT                   TCAARMSVALIKSGVKFKGRLLPIKEGKWKGRSIETGAKNLADILSQATVFGKPAVWRD
FT                   PTKFQTELGNKKGVVFFWKIDGYNGGSGSHIDLIEPTSAGAVCHSHCYFSCKQIWFWEL
FT                   R"
FT   CDS             69531..73392
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="STY0308"
FT                   /product="probable IcmF-related integral membrane
FT                   ATP-binding protein (pseudogene)"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical 121.5
FT                   kDa protein TR:AAG03467 (EMBL:AE004446) (1101 aa) fasta
FT                   scores: E(): 0, 32.2% id in 1130 aa, and to Vibrio cholerae
FT                   icmf-related protein TR:AAF96034 (EMBL:AE004353) (1181 aa)
FT                   fasta scores: E(): 7e-23, 24.3% id in 1241 aa, and to
FT                   Legionella pneumophila IcmF protein involved in host cell
FT                   killing and bacterial conjugation icmF TR:O54529
FT                   (EMBL:Y15044) (973 aa) fasta scores: E(): 3.3e-10, 21.6% id
FT                   in 1010 aa. Contains five possible transmembrane domains.
FT                   There is a frameshift around aa 601; the sequence has been
FT                   checked, and is believed to be correct"
FT   misc_feature    70113..70136
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             73392..74159
FT                   /transl_table=11
FT                   /gene="STY0310"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z962"
FT                   /protein_id="CAD08741.1"
FT                   /translation="MRRPAVVSAPAMFGRLPDQRDYVRWRVGAEEGRIWQDWLNRQTWV
FT                   GSGRHIVLPEGQTTDEERDGWMHLSPRGEHDMPAPEHHPLPWSFVMSPGFLPMGGTTDW
FT                   LTGVLMASRDSVGRPWPLVIYQRCGREWLDESLQETQGWLYWLARLAAQHITPDTMRRG
FT                   RLTEQVDQLWAMWQPGPWWAQWLRGLRRTSQRSWELTGLPDEAPVVELPGVRYLPWPGW
FT                   PGKTLGQATPGQGWFWQQNSEGRYVDALRLAEK"
FT   CDS             74202..74672
FT                   /transl_table=11
FT                   /gene="STY0311"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z961"
FT                   /protein_id="CAD08742.1"
FT                   /translation="MGNYDKACNNTEAVRFIQKYKNDCEIIANQLEVPVEFILAVAAKE
FT                   SRYGQGRIATEYNNFFSMHGPAPLQLSKVHPQGSHDVWVATYTSFLNCAKSFAIRFGSA
FT                   VRKINDPKKFAQALIESRFNSGKSSNGGHTGYASELVAMIGMVKRRMACSVK"
FT   CDS             74657..75130
FT                   /transl_table=11
FT                   /gene="STY0312"
FT                   /product="probable secreted protein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z960"
FT                   /protein_id="CAD08743.1"
FT                   /translation="MFSKIVSLLLFTILSVSSYAQVLVSNIPVFDLAKLNQEGLAETQA
FT                   QALLVLSLKNKKYNITLPSVFMDEALKNDQGKPFHSGYYSFGVGYDSPSVGATDIWGLF
FT                   SVSPKTGDIWEEYSCERISFPALQKIQQEIMKKTGATFASEVVQRRGLGCTDE"
FT   CDS             75234..75704
FT                   /transl_table=11
FT                   /gene="STY0313"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z959"
FT                   /protein_id="CAD08744.1"
FT                   /translation="MGNYDKACNNVGAVRFVQEHMKVCEIIAKELDVPVENILGLAAAE
FT                   SQYGTGRIARGYNNYFSLQAPASFQSGRVHPKDSNKTWVAIFSSFSVCARSFAVKYGDA
FT                   VRGKKDALVFSEALVAAGFNSGSHITGGTDNYARITAGIIIMVGRRIACPVK"
FT   CDS             75689..76150
FT                   /transl_table=11
FT                   /gene="STY0314"
FT                   /product="probable secreted protein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z958"
FT                   /protein_id="CAD08745.1"
FT                   /translation="MPRKIMLVFFLFISEFCYAQAVVSEFNLSDINRGGMTKAQAEKLL
FT                   IIALKYQKYDLSLDGVFVDGDLQDKHGNPPHPGYYDFSLGYDTPTAGAIDYWGLFSVSS
FT                   QTGDIWEINKCERIIFPQLQKIQQEIMKKTGATFASEVVQRRGLGCTDE"
FT   CDS             76278..76694
FT                   /transl_table=11
FT                   /gene="STY0316"
FT                   /product="probable secreted protein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence"
FT                   /db_xref="InterPro:IPR018696"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z957"
FT                   /protein_id="CAD08746.1"
FT                   /translation="MKKYAVEVLFMSACAGMFLPVFAWGGTDVNIDNPLAECVDIHPVH
FT                   RQEMDNLTILKTTVTLKKSTGECGCFSALISYTSLLAQDVEGYGRGSAYSLQEGNISLA
FT                   KMQGRYPFSFVLSVDNQSVRDQKLALMIRCTPPL"
FT   CDS             76721..77158
FT                   /transl_table=11
FT                   /gene="STY0317"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z956"
FT                   /protein_id="CAD08747.1"
FT                   /translation="MAVRLTFDGQKLTWPGIGIFKATTGLPDLQWPDKQCVPDAAIPEG
FT                   NYKLFIQFQGEAPIRNAADCDLGPSWGWSTIPRGQAAGTCEIYWANWGYNRIRLESADE
FT                   KTRKACGGKRGGFYIHDSTKGYSHGCIEVEPVFFRILKQET"
FT   CDS             77166..77273
FT                   /transl_table=11
FT                   /gene="STY0318"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z955"
FT                   /protein_id="CAD08748.1"
FT                   /translation="MVKRYLRLMLSMFLVSKRMVEQNNNTVKTGSNYRV"
FT   CDS             77636..79825
FT                   /transl_table=11
FT                   /gene="STY0319"
FT                   /product="Rhs-family protein"
FT                   /note="Similar to several Rhs proteins e.g. Escherichia
FT                   coli RhsG accessory genetic element VgrG protein TR:O52672
FT                   (EMBL:AF044503) (713 aa) fasta scores: E(): 0, 32.6% id in
FT                   580 aa"
FT                   /db_xref="InterPro:IPR006533"
FT                   /db_xref="InterPro:IPR017847"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z954"
FT                   /protein_id="CAD08749.1"
FT                   /translation="MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAEAA
FT                   VEQAAGSLFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSG
FT                   SAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVN
FT                   IELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDIL
FT                   DEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLV
FT                   LADAISAHKACPDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLL
FT                   ANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMT
FT                   GYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQR
FT                   TVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAG
FT                   KGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLY
FT                   GGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGED
FT                   RNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLML
FT                   HTSDVMQLIGKGIDMNPDGGTAVTADDIAPLPTSE"
FT   CDS             79849..80295
FT                   /transl_table=11
FT                   /gene="STY0320"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="InterPro:IPR014894"
FT                   /db_xref="InterPro:IPR016124"
FT                   /db_xref="UniProtKB/TrEMBL:Q93IR2"
FT                   /protein_id="CAD08750.1"
FT                   /translation="MDRPYRIQEGCFVLPETFTDRSVNIFILEGNERTSPSLNISRDTL
FT                   KPDEDLPAYIDRQIALMKKNLGQHRVLSRAPAQAGTGNDALMGEQIAATHKSGKTEVYQ
FT                   RQAGFIATPGKVLVFTLTSPRPFDDKADLLWNTWLAGFQPDKNE"
FT   misc_feature    80125..80148
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             80314..84378
FT                   /transl_table=11
FT                   /gene="STY0321"
FT                   /product="Rhs-family protein"
FT                   /note="Similar to several Rhs proteins e.g. Streptomyces
FT                   coelicolor putative Rhs protein TR:CAB82067 (EMBL:AL161803)
FT                   (927 aa) fasta scores: E(): 0, 28.2% id in 861 aa, and to
FT                   Escherichia coli RhsC protein precursor SW:RHSC_ECOLI
FT                   (P16918; P77194) (1397 aa) fasta scores: E(): 1.1e-25,
FT                   26.9% id in 1304 aa"
FT                   /db_xref="InterPro:IPR001826"
FT                   /db_xref="InterPro:IPR006530"
FT                   /db_xref="InterPro:IPR008727"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z953"
FT                   /protein_id="CAD08751.1"
FT                   /translation="MYEAARVDDPIYHTSALAGFLIGAIIGIAIIALAAFAFFSCGFLA
FT                   GLILGFMADQIASGVLQLGEAIGRSIHHTAGKILTGSENVSTNSRPAARAVLSTVKCDN
FT                   HIAEKRIAQGSGNIYINSQPAARKDDHTECDAVVEDGSPNVFLGGGTQTVLEISSEIPD
FT                   WLRKVVDVLFVVASLLGGLAGAWRQAAKLGTKFGTKCAAKFIGGELTGMAVSEAISGLF
FT                   SNPVDVTTGQKILLPETDFTLPGRLPVTCSRFYASHLETVGLLGQGWRLNWETSLREDD
FT                   EHITLTGVQGRELRYPKMMLTPGHQIFGPKEQLYLSRLHDGRYVLHYTDRSYYVFGDFD
FT                   SDGMAYLLFMETPHRQRIVFGHEGGRLVRIASSSGHHLLLHRTQTPAGERLSRIELVQG
FT                   GTCGNLVEYRYDDNGQLTGVVNRAGTQVRQFAYENGLMTAHSNAAGFTCRYRWQELDGA
FT                   PRVTEHDTSDGEHYRFDYDFAAGTTTVTGRQGESWQWWYDRETYITAHRTPGGGMYRFT
FT                   YNEDHFPVNIGLPGGRTVAYEYDIQNRVVKTTDPEGRVTQTQWNGEFDEITRTALDDDA
FT                   VWKTQYNAHGQPVQETDPEGRVTQYAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTD
FT                   CSGRSTGYDHDEDGNLTRVTDAEGKVVRISYNRLGLPETVNSPGKQQDRYTWNALGLMS
FT                   SHRRITGSVESWRYTPRGLLAAHTDEEKRETRWQYTPEGRVTALTNGNGAQYRFSHDAD
FT                   GRLMREVRPDGLSRTFILDDSGYLTAIQTTGTQGGVRRETQQRDALGRLLRTENEHGQR
FT                   TFSYNRLDQITAVTLTPTEAGQQQHRMQADTVRFEYDRSGWLTAEHAGNGSICYQRDAL
FT                   GNPTDITLPDGQHLTHLYYGSGHLLQTALDGLTVSEYERDSLHRQIMRTQGQLATYSGY
FT                   DDDGLLSWQRSLAPGSAPVLPGQRPARQGCVTSRDYYWNNHGEVGTIDDGLRGSVVYSY
FT                   DRSGYLTGRSGQMYDHDRYYYDKAGNLLDNEGQGPVMNNRLPGCGRDRYGYNEWGELTT
FT                   RRDQQLEWNAQGQLTRVISGNTETHYGYDALGRRIRKATYGRHTGHTARSRTDFVWEGF
FT                   RLLQENVQQQGWRTYVYDAEQPYTPVASVTGRGESRQVWYYHTDVTGTPQEVTAADGTL
FT                   VWAGYIRGFGENAADISNSGAYFHQPLRLPGQYFDDETGLHYNLFRYYAPECGRFVSQD
FT                   PIGLRGGLNLYAYCPNPLTWIDPLGLDLHHIIPQEVWKTFKTDLKKVTGYVQNVTKKAM
FT                   DVTNLIDLDKPFHGNHPAYSAYVKDKISELIKNKKLSLTELRNLQDELRSKINAAKASG
FT                   KNLNDYFKGGC"
FT   CDS             84381..85058
FT                   /transl_table=11
FT                   /gene="STY0322"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z952"
FT                   /protein_id="CAD08752.1"
FT                   /translation="MKYKKIRVSYDTEVTGNVNGVYSVEIKDSLSFKSKEDKKYFEGFF
FT                   LKNSKDYNRVMIDDFKCIDVNKIQEICFFPVRKKIKEIDMIDFCPFKLGLDFLISKKLF
FT                   DIMNNFNLPPVNKIPTRINTFNTEYFLIGFPMIPQERIDLNKSIFFDTKKRSEFNLKSY
FT                   DAFINTDFSVKPRKIYPDVFYDVDTIGFQGKGLFFSDRLIDAIQDAGIVGLHVDDTEME
FT                   MNP"
FT   CDS             85077..85370
FT                   /transl_table=11
FT                   /gene="STY0323"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z951"
FT                   /protein_id="CAD08753.1"
FT                   /translation="MTAMLFFLLLVSKPAIGSNTLKIPTHHRNIPGVIQRTGKIFQPCF
FT                   NVSLVDIGHAHPFNTAQQFTGILQRDHDAVFHHPNFNGHSVNKPGLRHPFTA"
FT   CDS             85466..87997
FT                   /transl_table=11
FT                   /gene="STY0324"
FT                   /product="Rhs-family protein"
FT                   /note="Similar to several Rhs proteins e.g. Streptomyces
FT                   coelicolor putative Rhs protein TR:CAB82067 (EMBL:AL161803)
FT                   (927 aa) fasta scores: E(): 0, 28.9% id in 850 aa, and to
FT                   Escherichia coli RhsB protein precursor rhsB SW:RHSB_ECOLI
FT                   (P16917) (1411 aa) fasta scores: E(): 7.3e-29, 31.3% id in
FT                   941 aa"
FT                   /db_xref="InterPro:IPR001826"
FT                   /db_xref="InterPro:IPR006530"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z950"
FT                   /protein_id="CAD08754.1"
FT                   /translation="MTMHREPGGERYYYTWAWFEGPDDAAWRVTGHHTDSGEQYRLDWN
FT                   LAERSLCVTDSMGRTRCHWWDAQGLVTAYRDEAGQMTTFRWSDEERLLLGMTDAQGGKW
FT                   RYVYDRLGHLTETHDPLGRVEQTQWHPVWHQPETEVDAAGVAWRYEYDERGNLQAVSDP
FT                   LHQRTVYGYDRHGQVVRITDARGGDKYLQWNEDGQLMRHTDCSGSQTAWFYDERTRLER
FT                   VTDAESNSTRYSYDGNGHLTEVMFADGRTERYQPDAAGRLVKYTSPAGQITRWQRDGQG
FT                   RVRRQTDATGRRTAYEYDAYGRLTTLTNENGESYRFRYDVLDRVTEQTDPGGSRRAYGY
FT                   NALNAVTAVIYGGERGGEIRHGLERDAAGRLTAKITPETRTEYRYDAADRLLEIRRRRH
FT                   DAAEGGEPEVIRFSYDSAGNLLSEETAQGVLQHRYDVQGNRTETQMPDGRTLRYLYYGS
FT                   GHLQQINLGRDVISEFTRDHLHREVQRSQGRLDMRRMYDRTGRLTRKLTCKGMRGVVPE
FT                   TFIDREYAYSGQDELLKKRHSRQGVTDYFYDTTGRITACRNEAYLDSWQYDAAANLLDR
FT                   RQGETAQAGAGSVVPFNRITSYRGLHYRYDEYGRVVEKRGRNGTQHYRWDAEHRLTEVA
FT                   VTRGGTVRRYGYVYDAPGRRVEKHELDAEGKPYNRTTFLWDGMRLAQECRLGRSSSLYI
FT                   YSDRGSHEPLARVDRAAPGEADEVLYYHTDVNGAPEEMTDGGGNIVWEAGYQVWGNLTH
FT                   EKETRPVQQNLRFQGQYLDRETGLHYNLYRFYDPDIGKFISGDPIGLAGGINLYQYAPN
FT                   PLSYIDPLGLCKKFAGKGSPAERARNYRSTG"
FT   CDS             88076..88336
FT                   /transl_table=11
FT                   /gene="STY0326"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to the extreme C-terminus of Neisseria
FT                   meningitidis filamentous hemagglutinin B-like fhab protein
FT                   TR:CAB71945 (EMBL:AJ391255) (2015 aa) fasta scores: E():
FT                   1.3e-06, 46.0% id in 63 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z949"
FT                   /protein_id="CAD08755.1"
FT                   /translation="MNTNNSPFLHTPADGSRKFTTFEVGHDRAFDSEVKIFEHIANKFP
FT                   TTAKGRIDLYSELKVCPSCSEVITQFKAMYPNIEVNVTWGG"
FT   CDS             88338..88781
FT                   /transl_table=11
FT                   /gene="STY0327"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="InterPro:IPR018958"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z948"
FT                   /protein_id="CAD08756.1"
FT                   /translation="MEQRAFLIEIKKLIASITSKNMTVKGCSTEDILYLEENYGELPKS
FT                   YKLFLSLLGVESGDFKEGTDLLFKDINDINKYTVELMQENNISIPDGMYSFLLHQGYSA
FT                   LFFIERDDDPSVYCYTEGKEIKKTKYVFSEYVLAEIELYNRYQ"
FT   CDS             complement(88851..89156)
FT                   /transl_table=11
FT                   /gene="STY0328"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="GOA:Q8Z947"
FT                   /db_xref="InterPro:IPR014944"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z947"
FT                   /protein_id="CAD08757.1"
FT                   /translation="MARLCGILTYSRVERLSVRLYGEWMPQAGFINGMPVKVRVMRDCI
FT                   VITPQHTRGLFVCIEGMGVTFINQKKVKAWLKTFPGALNDTGDIPVIKRSRLEGGI"
FT   CDS             89209..89913
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="STY0329"
FT                   /product="IS element transposase (pseudogene)"
FT                   /note="Similar to Salmonella enteritidis IS1351 transposase
FT                   orfa TR:O06945 (EMBL:Z83734) (88 aa) fasta scores: E():
FT                   7.4e-13, 70.9% id in 55 aa, and to Yersinia enterocolitica
FT                   is1400 transposase a trp1400A TR:Q9X9H8 (EMBL:AJ132945) (96
FT                   aa) fasta scores: E(): 5.5e-11, 61.8% id in 55 aa; contains
FT                   a deletion and at least two frameshifts"
FT   misc_feature    89632..89910
FT                   /note="Pfam match to entry PF00665 rve, Integrase core
FT                   domain, score 48.70, E-value 6.2e-13"
FT   CDS             90669..91163
FT                   /transl_table=11
FT                   /gene="safA"
FT                   /gene_synonym="STY0332"
FT                   /product="probable lipoprotein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence and appropriately positioned PS00013 Prokaryotic
FT                   membrane lipoprotein lipid attachment site"
FT                   /db_xref="InterPro:IPR018569"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z946"
FT                   /protein_id="CAD08759.1"
FT                   /translation="MKNIKKLIIASVLSMITASCYAGSIVVGSEQQSSVDIGFASPQQL
FT                   SVTFAPVAGLKAGVIKSNTEIATIAVSSVAAKQFAIAADFKAKNVMNGDTWTLYGKNTG
FT                   KGIKVYFYGETTSPKGNVNYNGHQWIIYDINDKLGVKLAGDQNVPADVFPMTVNIAAYQ
FT                   A"
FT   misc_feature    90696..90728
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             91296..91794
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="safE"
FT                   /gene_synonym="STY0333"
FT                   /product="probable lipoprotein (pseudogene)"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence and appropriately positioned PS00013 Prokaryotic
FT                   membrane lipoprotein lipid attachment site. Approx 46%
FT                   identity to gene immediately upstream, but with a single
FT                   frameshift"
FT   misc_feature    91323..91355
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             91869..92609
FT                   /transl_table=11
FT                   /gene="safB"
FT                   /gene_synonym="STY0335"
FT                   /product="periplasmic fimbrial chaperone protein"
FT                   /note="Similar to Escherichia coli chaperone protein AggD
FT                   precursor SW:AGGD_ECOLI (P46004) (252 aa) fasta scores:
FT                   E(): 0, 50.9% id in 216 aa, and to Escherichia coli
FT                   chaperone protein AfaB precursor afaB SW:AFAB_ECOLI
FT                   (P53516) (247 aa) fasta scores: E(): 0, 48.9% id in 227 aa"
FT                   /note="Fasta hit to YCBR_ECOLI (233 aa), 33% identity in
FT                   203 aa overlap"
FT                   /note="Fasta hit to ECPD_ECOLI (246 aa), 31% identity in
FT                   226 aa overlap"
FT                   /note="Fasta hit to FIMC_ECOLI (241 aa), 35% identity in
FT                   199 aa overlap"
FT                   /note="Fasta hit to SFMC_ECOLI (230 aa), 30% identity in
FT                   198 aa overlap"
FT                   /note="Paralogue of E. coli yraI (YRAI_ECOLI); Fasta hit to
FT                   YRAI_ECOLI (231 aa), 37% identity in 202 aa overlap"
FT                   /db_xref="GOA:Q8Z945"
FT                   /db_xref="HSSP:1P5U"
FT                   /db_xref="InterPro:IPR001829"
FT                   /db_xref="InterPro:IPR008962"
FT                   /db_xref="InterPro:IPR016147"
FT                   /db_xref="InterPro:IPR016148"
FT                   /db_xref="InterPro:IPR018046"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z945"
FT                   /protein_id="CAD08761.1"
FT                   /translation="MKIISFGVMAAVLFVSNSITPPVYAAEQKLSLNTKSFSVKLGATR
FT                   VIYHAGTVGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIV
FT                   RTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAVKGT
FT                   PEDVAGNLRWVEAGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSA
FT                   HGDVEWRVITDFGGESHPFHYVLK"
FT   misc_feature    91998..92573
FT                   /note="Pfam match to entry PF00345 pili_assembly,
FT                   Gram-negative pili assembly chaperone, score 289.20,
FT                   E-value 2.2e-84"
FT   misc_feature    92196..92249
FT                   /note="PS00635 Gram-negative pili assembly chaperone
FT                   signature"
FT   CDS             92633..95143
FT                   /transl_table=11
FT                   /gene="safC"
FT                   /gene_synonym="STY0336"
FT                   /product="outer-membrane fimbrial usher protein"
FT                   /note="Similar to Escherichia coli aggregative adherence
FT                   fimbria I usher protein AafC TR:Q9X4L5 (EMBL:AF114828) (856
FT                   aa) fasta scores: E(): 0, 49.9% id in 844 aa, and to
FT                   Escherichia coli outer membrane usher protein AfaC
FT                   precursor afaC SW:AFAC_ECOLI (P53517) (859 aa) fasta
FT                   scores: E(): 0, 49.9% id in 849 aa"
FT                   /note="Fasta hit to YCBS_ECOLI (866 aa), 35% identity in
FT                   859 aa overlap"
FT                   /note="Fasta hit to YRAJ_ECOLI (838 aa), 36% identity in
FT                   843 aa overlap"
FT                   /note="Fasta hit to SFMD_ECOLI (867 aa), 35% identity in
FT                   846 aa overlap"
FT                   /note="Paralogue of E. coli fimD (FIMD_ECOLI); Fasta hit to
FT                   FIMD_ECOLI (878 aa), 36% identity in 865 aa overlap"
FT                   /db_xref="GOA:Q8Z944"
FT                   /db_xref="InterPro:IPR000015"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z944"
FT                   /protein_id="CAD08762.1"
FT                   /translation="MKFKQPALLLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQ
FT                   GVQQPGTYRVDVMVNGKRVDTRDVVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQ
FT                   LWKAAKTPDECADLTAIPQAKAVLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPA
FT                   FLMNYSARTTQTDYKMDMVGRDNSSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAA
FT                   YTYAERGLYSLKSRLTLGQKTSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIA
FT                   RTQARVEVKQNGYTIYNTTVAPGPFALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQT
FT                   PAIALHQGYLKYSLLAGRYRSSDSATDKAQIAQATLMYGLPWNLTAYGGIQSATHYQAA
FT                   SLGLGGSLGRWGSLSVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATGTNLFLTRWQYA
FT                   SQGYNTLSDVLDSYRHNGNRLWSWRENLQPSSRTTLMLSQSWGRHLGNLSLIGSRTDWR
FT                   NRPGHDDSYGLSWGTSIGGGSLSLNWNQNRTLWRNGGHRKENITSLWFSMPLSRWTGNN
FT                   VSASWQMTSPSHGGQTQQVGVNGEAFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGA
FT                   YGLLGGDYSYSRAMRQMGVNIAGGIVIHHHGVTLGQPLQGSVALVEAPGASGVPVGPWP
FT                   GVKTDFRGDTTVGNLSVYQENTVSLDPSQLPDDAEVTQTDVRVVPTEGAVVEAKFHTRI
FT                   GARALMTLKREDGSAIPFGAQVIVNGQDGSADLVDTDSQVYLTGLADKGELTVKWGAQQ
FT                   CRVNYHLPAHKGIAGLYQMSGLCR"
FT   misc_feature    92702..95092
FT                   /note="Pfam match to entry PF00577 Usher, Fimbrial Usher
FT                   proteins, score 1091.90, E-value 0"
FT   CDS             95165..95635
FT                   /transl_table=11
FT                   /gene="safD"
FT                   /gene_synonym="STY0337"
FT                   /product="putative fimbrial structural subunit"
FT                   /note="Similar to Escherichia coli AfaD protein precursor
FT                   SW:AFAD_ECOLI (Q47038; Q47039; Q47040) (147 aa) fasta
FT                   scores: E(): 4e-07, 28.6% id in 154 aa, and to Salmonella
FT                   enteritidis SEF14 fimbrial structural subunit sefD
FT                   TR:Q53997 (EMBL:U07129) (148 aa) fasta scores: E():
FT                   7.1e-06, 22.8% id in 136 aa"
FT                   /db_xref="GOA:Q93IN7"
FT                   /db_xref="InterPro:IPR008394"
FT                   /db_xref="UniProtKB/TrEMBL:Q93IN7"
FT                   /protein_id="CAD08763.1"
FT                   /translation="MWMKIQRVKTVIYSVSLLVAASSLVPIANAAEKLQTTLRVGTYFR
FT                   AGHVPDGMVLAQGWVTYHGSHSGFRVWSDEQKAGNTPTVLLLSGQQDPRHHIQVRLEGE
FT                   GWQPDTVSGRGAILRTAADNASFSVVVDGNQEVPADTWTLDFKACALAQEDT"
FT   CDS             96043..96864
FT                   /transl_table=11
FT                   /gene="STY0338"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Escherichia coli ShF TR:Q9X692
FT                   (EMBL:AF134403) (280 aa) fasta scores: E(): 0, 63.7% id in
FT                   267 aa, and to Shigella flexneri Shf1 TR:P72436
FT                   (EMBL:U61977) (132 aa) fasta scores: E(): 4.3e-29, 61.0% id
FT                   in 118 aa"
FT                   /db_xref="GOA:Q8Z943"
FT                   /db_xref="InterPro:IPR002509"
FT                   /db_xref="InterPro:IPR011330"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z943"
FT                   /protein_id="CAD08764.1"
FT                   /translation="MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVT
FT                   AAAVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVR
FT                   IPAGEPVYSHDECQMLVKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVS
FT                   RNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRM
FT                   NNPVIGSQRIGRINTKERKNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD"
FT   CDS             97345..97476
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="STY0339"
FT                   /product="probable transposase remnant (pseudogene)"
FT                   /note="Similar to Yersinia pestis pMT1 plasmid transposase
FT                   y1062 or ypmt1.80C TR:O68779 (EMBL:AF053947) (402 aa) fasta
FT                   scores: E(): 0.00094, 51.4% id in 37 aa"
FT                   /db_xref="PSEUDO:CAD08765.1"
FT   CDS             97682..98626
FT                   /transl_table=11
FT                   /gene="sinR"
FT                   /gene_synonym="STY0341"
FT                   /product="LysR-family transcriptional regulator SinR"
FT                   /note="Similar to Salmonella typhimurium regulatory protein
FT                   SinR SW:SINR_SALTY (P37459) (315 aa) fasta scores: E(): 0,
FT                   99.7% id in 314 aa and to Escherichia coli hypothetical
FT                   transcriptional regulator in dmsc-pfla intergenic region
FT                   ycaN SW:YCAN_ECOLI (P75836) (302 aa) fasta scores: E():
FT                   3.7e-18, 29.1% id in 309 aa, and to Vibrio cholerae AphB
FT                   (involved in activation expression of the ToxR virulence
FT                   cascade) aphB TR:Q9XC54 (EMBL:AF148502) (291 aa) fasta
FT                   scores: E(): 2e-15, 24.9% id in 293 aa"
FT                   /db_xref="GOA:Q8Z942"
FT                   /db_xref="InterPro:IPR000847"
FT                   /db_xref="InterPro:IPR005119"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z942"
FT                   /protein_id="CAD08766.1"
FT                   /translation="MELINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRL
FT                   ENSIEVTLLRRDSHHLELTGAGQTAYASMKRITSSFQSLLDELRNPDKIIRGSIKFSAP
FT                   AIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVFKSGIIESEDLVYR
FT                   KISPLKLVLCASPKYIRKYGRISHPGDLENHIIVGLHNHGLSGPLTLFRQEESYTISGA
FT                   VNVHLSSNNLLSVLNLVLEGKGINLMTPAWLATKYLKNNELEIILPEWRVPDLPIYLVW
FT                   RHRQYYSPLFQRFLSFIEDKWNNRPQIDFLNDD"
FT   misc_feature    97706..98137
FT                   /note="Pfam match to entry PF00126 HTH_1, Bacterial
FT                   regulatory helix-turn-helix protein, lysR family, score
FT                   124.90, E-value 1.5e-33"
FT   misc_feature    97748..97840
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature"
FT   CDS             98746..98859
FT                   /transl_table=11
FT                   /gene="STY0342"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z941"
FT                   /protein_id="CAD08767.1"
FT                   /translation="MMPTDGNDNTRKQDGAVFGQPEVKPMPETLQCTEKWR"
FT   CDS             98946..99113
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="STY0343"
FT                   /product="probable transposase remnant (pseudogene)"
FT                   /note="Similar to Salmonella enteritidis transposase orfa
FT                   TR:O06945 (EMBL:Z83734) (88 aa) fasta scores: E(): 2.3e-15,
FT                   79.6% id in 54 aa, and to Yersinia enterocolitica is1400
FT                   transposase a trp1400A TR:Q9X9H8 (EMBL:AJ132945) (96 aa)
FT                   fasta scores: E(): 5e-14, 72.2% id in 54 aa"
FT                   /db_xref="PSEUDO:CAD08768.1"
FT   CDS             complement(99172..99549)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="STY0344"
FT                   /product="probable transposase remnant (pseudogene)"
FT                   /note="Similar to Escherichia coli insertion sequence is21
FT                   putative ATP-binding protein. insertion sequence is21
FT                   putative ATP-binding protein SW:ISTB_ECOLI () (265 aa)
FT                   fasta scores: E(): 0, 88.0% id in 125 aa"
FT                   /db_xref="PSEUDO:CAD08769.1"
FT   misc_feature    complement(99286..99549)
FT                   /note="Pfam match to entry PF01695 IstB, IstB-like ATP
FT                   binding protein, score 39.30, E-value 6e-10"
FT   CDS             100764..101474
FT                   /transl_table=11
FT                   /gene="tcfA"
FT                   /gene_synonym="tsaA"
FT                   /gene_synonym="STY0345"
FT                   /product="putative fimbrial protein"
FT                   /note="Previously sequenced Salmonella typhi and Salmonella
FT                   enterica fimbrial subunit proteins TsaA or TcfA TR:Q9XDS4
FT                   (EMBL:AB029403) (236 aa) fasta scores: E(): 0, 100.0% id in
FT                   236 aa, and to Escherichia coli cs1 fimbrial subunit B
FT                   precursor CsoB or CooB SW:CSOB_ECOLI (P25731) (238 aa)
FT                   fasta scores: E(): 5.3e-14, 34.6% id in 205 aa, and to
FT                   Escherichia coli cfa/i fimbrial subunit A precursor cfaA
FT                   SW:CFAA_ECOLI (P25732) (206 aa) fasta scores: E(): 1.4e-13,
FT                   32.8% id in 189 aa. Contains probable N-terminal signal
FT                   sequence and appropriately positioned PS00013 Prokaryotic
FT                   membrane lipoprotein lipid attachment site"
FT                   /db_xref="InterPro:IPR008962"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XDS4"
FT                   /protein_id="CAD08770.1"
FT                   /translation="MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATSL
FT                   FVYSKSDHVQYIRTRIMRIEHPGMPQEKEVPAGNDIETGLVVSPEKFALSPGTKKTIRV
FT                   ISTQAPEREEAWRVYFEAVPELEDDPQAGGKQNSSVSVNLVWGVLLRVSPSDPRPALVT
FT                   DGHHLLNTGNTRLSLIRAGNCDTTCHWQNIGKSIYPGGSADIPAGIKSNAFRVEYRTGA
FT                   NSPVISADLTAAGK"
FT   misc_feature    100788..100820
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             101525..102100
FT                   /transl_table=11
FT                   /gene="tcfB"
FT                   /gene_synonym="tsaB"
FT                   /gene_synonym="STY0346"
FT                   /product="putative fimbrial subunit"
FT                   /note="Previously sequenced Salmonella typhi, and
FT                   Salmonella enterica TsaB or TcfB TR:Q9XDS3 (EMBL:AB029403)
FT                   (191 aa) fasta scores: E(): 0, 100.0% id in 191 aa, and to
FT                   Burkholderia cepacia adhesin major subunit pilin Cb1A
FT                   TR:Q51591 (EMBL:U10244) (184 aa) fasta scores: E(): 1e-21,
FT                   44.3% id in 158 aa, and to Escherichia coli cfa/i fimbrial
FT                   subunit B precursor CfaB SW:FMC1_ECOLI (P02971) (170 aa)
FT                   fasta scores: E(): 2.8e-16, 40.1% id in 167 aa, and to
FT                   Escherichia coli cs1 fimbrial subunit a precursor CsoA or
FT                   CooA SW:FMS1_ECOLI (P25730) (171 aa) fasta scores: E():
FT                   3.5e-15, 36.5% id in 170 aa"
FT                   /db_xref="GOA:Q9XDS3"
FT                   /db_xref="InterPro:IPR007540"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XDS3"
FT                   /protein_id="CAD08771.1"
FT                   /translation="MYTECTYITVINNKARLFFMNMKTSFIAAAVALATVYSFSVSAVQ
FT                   KDITVTANIDSTLELLQADGSSLPSTMKLDFMPGKGLVHKSLQTRLYSNDQTKSVNVKL
FT                   LNAPQLINVLDPTKTIDMEVTLGGRSLTTTNSVLEAKTLFPDGKTGDASALLNLDIGQK
FT                   AGAALQNLPAGEYSGLVSLVISQAVTAG"
FT   CDS             102209..104896
FT                   /transl_table=11
FT                   /gene="tsaC"
FT                   /gene_synonym="STY0347"
FT                   /product="outer membrane fimbrial usher protein"
FT                   /note="Previously sequenced Salmonella typhi TsaC TR:Q9XDS2
FT                   (EMBL:AB029403) (895 aa) fasta scores: E(): 0, 99.9% id in
FT                   895 aa and to Escherichia coli cfa/i fimbrial subunit C
FT                   precursor CfaC SW:CFAC_ECOLI (P25733) (869 aa) fasta
FT                   scores: E(): 0, 30.8% id in 869 aa and to Escherichia coli
FT                   aggregative adherence fimbria II usher protein AafC
FT                   TR:Q9X4L5 (EMBL:AF114828) (856 aa) fasta scores: E():
FT                   3.1e-05, 24.0% id in 638 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XDS2"
FT                   /protein_id="CAD08772.1"
FT                   /translation="MSRYFWMYYLLGLCSFTSQATLIPPPGFESLLEGQTEQIEVLLPG
FT                   HSLGLFPVVVKPDTVQFMSPLMVLESSGLAALPAAERQKALAALSRPLLRNSNLVCGVS
FT                   EAKDSSECGYVATDKEDVAVIFDENNAQLSLFLNRDWLPDEERRDKRWLTPTPEGVSAF
FT                   IHRQTLYLSDDLHSRNMTLNGSGALGLGDGRYLGGDWAAIWNQSEHYNNSQAWFDNLFV
FT                   RQDLGNQYYLQAGRMDQRNLSSATGGDFGFSLLPLSRFDGLRTGTTQAYVNHEVDHNAT
FT                   PVMVQVTRNARIDIYRGSELLGSQFLTPGMHTLDTHSLPPGSYPLALRVYEDGILRRTE
FT                   TQPFSKGGNSFSAQTQWFIQGGLEDTGDKASHYDGETVMAAGFQTGLRKNISLTEGISL
FT                   AHEAWYSETRLNSQHAVLDGTLDLSAGILHGTDSTSGNTEQVTYNDGFSASLWRNHTES
FT                   DACSGRHPQSVHASMTCQTSMNASLSVSVGNWYALLGYSTSRTEGRPVYRGYDDNSDKE
FT                   NVFWRQAYIPASHRESAQASATYSLNMAGMNINTHGGVWRTRNDGVNDDGLFMSVSVSY
FT                   ASQPPTMTGSNRYTSAGTDIHSSRNQKTQTSWNVNHVRSWQQDLYRELSVGFSGYNDDS
FT                   WSGSLGGRMSGRMGELSATISNSHQRNAGSASSLTAGYSSSLALSRNGLFWGGGQDGEP
FT                   ASGMAVNVESEGDEGSSGKVVSVRGSSQPFSLGFGQQSLLLMEGYNATEVTIEDAGVSS
FT                   QGMAGVKAGGGSRCYFLTPGHLLVHNISASMSRLYVGRVLDKDGRPLLDAQPLNYPFLS
FT                   LGPSGRFSLQSEHKESSLWLLSKNRILRCPMSVHKRRDVMQVVGDVRCELSDVDALPQA
FT                   LQISPRVIRLLNVAGLLRHSVQEA"
FT   CDS             104919..105998
FT                   /transl_table=11
FT                   /gene="tcfD"
FT                   /gene_synonym="tsaD"
FT                   /gene_synonym="STY0348"
FT                   /product="putative fimbrail protein"
FT                   /note="Previously sequenced Salmonella typhi, and
FT                   Salmonella enterica TsaD or TcfD TR:Q9XDS1 (EMBL:AB029403)
FT                   (359 aa) fasta scores: E(): 0, 100.0% id in 359 aa and to
FT                   Escherichia coli cfa/i fimbrial subunit E CfaE
FT                   SW:CFAE_ECOLI (P25734) (360 aa) fasta scores: E(): 3.4e-17,
FT                   28.2% id in 298 aa and to Escherichia coli CotD precursor
FT                   TR:Q47119 (EMBL:Z47800) (364 aa) fasta scores: E():
FT                   3.3e-14, 29.3% id in 294 aa"
FT                   /db_xref="InterPro:IPR010888"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XDS1"
FT                   /protein_id="CAD08773.1"
FT                   /translation="MSNKMKWTSMTAHWSAIINFIRKYVYPARIIAILLMAGATLPQVA
FT                   DAITVDLNYDKNNVAVITPVWSQEWSVANVLGGWVCRSNRNENEGACEETHLVWWYAFG
FT                   AYSKIRLRFREQISHAEITLILLGSVRDACYTGVINMNAAACQWGRSLKLRIPSEELAK
FT                   IPTSGTWKATLVLDYLQWGGDDPLGTSTTDITLNVTDHFAENAAIYFPQFGTATPRVDL
FT                   NLHRMNASQMSGRANLDMCLYDGGVKARSLQMKIEGSNKSGTGFQVIKSDSADTIDYAV
FT                   SMNYGGRSIPVTRGVEFSLDNVDKAATRPVVLPGQRQAVRCVPVPLTLTTQPFNIREKR
FT                   SGEYQGTLTVTMLMGTQTP"
FT   CDS             106131..106586
FT                   /transl_table=11
FT                   /gene="tinR"
FT                   /gene_synonym="STY0349"
FT                   /product="transcriptional regulator"
FT                   /note="Similar to Salmonella enterica TinR protein
FT                   TR:Q9RIR7 (EMBL:AJ242964) (151 aa) fasta scores: E(): 0,
FT                   99.3% id in 151 aa, Escherichia coli hypothetical
FT                   transcriptional regulator in mdl-cof intergenic region YbaO
FT                   SW:YBAO_ECOLI (P54986; P71209; P77575) (152 aa) fasta
FT                   scores: E(): 1.1e-22, 44.0% id in 150 aa and to Escherichia
FT                   coli and Enterobacter aerogenes leucine-responsive
FT                   regulatory protein Lrp or AlsB or LivR or IhB or OppI
FT                   SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E(): 3.7e-13,
FT                   30.7% id in 150 aa"
FT                   /db_xref="GOA:Q8Z940"
FT                   /db_xref="InterPro:IPR000485"
FT                   /db_xref="InterPro:IPR011008"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR019885"
FT                   /db_xref="InterPro:IPR019887"
FT                   /db_xref="InterPro:IPR019888"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z940"
FT                   /protein_id="CAD08774.1"
FT                   /translation="MTVYLDDKDKELLKEIQKDCAQTLWQLAYKVGLTPTPCFKRLKKL
FT                   KDRGVIIGQFALLDKEKLGLSLNVFIMINISEEQYASISEKIKSMPEVIAFYRISGSFN
FT                   YLMHTVFTDMNDYYSFYEKIILTNSSISGSASSFVLEQIKETNELPV"
FT   misc_feature    106215..106517
FT                   /note="Pfam match to entry PF01037 ASNC_trans_reg, AsnC
FT                   family, score 114.80, E-value 1.6e-30"
FT   CDS             106726..107343
FT                   /transl_table=11
FT                   /gene="STY0350"
FT                   /product="hypothetical protein"
FT                   /note="Identical to Salmonella enterica TioA protein
FT                   TR:Q9RIR6 (EMBL:AJ242964) (205 aa) fasta scores: E(): 0,
FT                   100.0% id in 205 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RIR6"
FT                   /protein_id="CAD08775.1"
FT                   /translation="MVKYHPVHVTKNRIKTDDVTDIYFVEPFWKKGENHIIESLMFFEE
FT                   LQKSFNLFNHKYGLNKYILRIPWEFVLIHMERISKLNSVGLFAVSVDFNNNHKFLSEYI
FT                   RSRRDYGMEVWFDFCGKHSYSSEIKNLGFFFQACVVPRDPNFISSVYHYHKFQKILVGD
FT                   INDVEQRAVYQNEVDYMYGMQWPSSYDGFFFRDHKKNETWCI"
FT   CDS             complement(108306..109025)
FT                   /transl_table=11
FT                   /gene="STY0351"
FT                   /product="possible outer membrane adhesin"
FT                   /note="Similar to Escherichia coli heat resistant
FT                   agglutinin 1 TR:Q46680 (EMBL:U07174) (247 aa) fasta scores:
FT                   E(): 1.6e-18, 38.1% id in 257 aa, and to Escherichia coli
FT                   tia invasion determinant precursor TR:Q46760 (EMBL:U20318)
FT                   (251 aa) fasta scores: E(): 3.5e-14, 38.3% id in 256 aa,
FT                   and to Salmonella typhimurium virulence membrane protein
FT                   PagC precursor. virulence membrane protein pagc precursor
FT                   SW:PAGC_SALTY () (188 aa) fasta scores: E(): 0.001, 25.5%
FT                   id in 141 aa"
FT                   /db_xref="GOA:Q8Z939"
FT                   /db_xref="InterPro:IPR011250"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z939"
FT                   /protein_id="CAD08776.1"
FT                   /translation="MKNFFAVCIIPLVVTWSATASAKEGIYITGKAGTSVVNVYGINST
FT                   FSQEEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI
FT                   IAFGQPVHINVKNQVRMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFG
FT                   INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDA
FT                   DTKAASNDFMLGITYAF"
FT   CDS             complement(109350..109757)
FT                   /transl_table=11
FT                   /gene="STY0352"
FT                   /product="probable secreted protein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence"
FT                   /db_xref="GOA:Q8XEJ7"
FT                   /db_xref="InterPro:IPR012899"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XEJ7"
FT                   /protein_id="CAD08777.1"
FT                   /translation="MKNFVRTTLLAATLAGVSFGAFATAVPNPPLPAQDPIVQHLKLTN
FT                   DQITRIKKLHQQLETDVSQISMKGIKDGALIEVIKSGKWDDAAVKQQLAAFSNIEQQAR
FT                   YYRVKYYFDLSKVLTPEQRQQVQQDLAQALE"
FT   CDS             complement(110067..110834)
FT                   /transl_table=11
FT                   /gene="STY0353"
FT                   /product="possible hydrolase"
FT                   /note="Similar to many hypothetical proteins e.g.
FT                   Escherichia coli hypothetical protein in agr operon
FT                   TR:Q9R2E1 (EMBL:D83536) (259 aa) fasta scores: E(): 0,
FT                   82.0% id in 255 aa, and to Bacillus subtilis YkrU protein
FT                   ykrU TR:O31664 (EMBL:Z99111) (259 aa) fasta scores: E():
FT                   4.3e-25, 32.7% id in 251 aa"
FT                   /note="Orthologue of E. coli YAFV_ECOLI; Fasta hit to
FT                   YAFV_ECOLI (256 aa), 82% identity in 253 aa overlap"
FT                   /db_xref="GOA:Q8Z938"
FT                   /db_xref="InterPro:IPR001110"
FT                   /db_xref="InterPro:IPR003010"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z938"
FT                   /protein_id="CAD08778.1"
FT                   /translation="MSGLKITLLQQPLVWMDGLANLRHFDRQLELVSGRDVIVLPEMFT
FT                   TGFAMEAANNSLSQDSVITWMQAKARQTDALIAGSAALQTERGAVNRFLLVEPEGKVHL
FT                   YDKRHLFRMADEHQHYAAGDKRIIVQWRGWRILPLICYDLRFPIWSRNRNDYDLALYVA
FT                   NWPAPRSLHWQTLLTARAIENQAYVAGCNRVGTDGNGLHYRGDSRIINPQGDIIATAEP
FT                   HQATRIDADLSLVALQDYREKFPAWRDADPFTL"
FT   misc_feature    complement(110070..110828)
FT                   /note="Pfam match to entry PF00795 CN_hydrolase,
FT                   Carbon-nitrogen hydrolase, score 70.50, E-value 3.6e-17"
FT   CDS             complement(110943..113387)
FT                   /transl_table=11
FT                   /gene="STY0354"
FT                   /product="possible acyl-CoA dehydrogenase"
FT                   /note="Similar to Escherichia coli hypothetical 87.0 kDa
FT                   protein in dnaq-gmha intergenic region yafH SW:YAFH_ECOLI
FT                   (Q47146; Q47680; P75673) (794 aa) fasta scores: E(): 0,
FT                   95.2% id in 794 aa, and to Mus musculus acyl-coa
FT                   dehydrogenase, very-long-chain specific, mitochondrial
FT                   precursor SW:ACDV_MOUSE () (656 aa) fasta scores: E():
FT                   1.8e-09, 26.0% id in 600 aa"
FT                   /note="Orthologue of E. coli YAFH_ECOLI; Fasta hit to
FT                   YAFH_ECOLI (794 aa), 95% identity in 794 aa overlap"
FT                   /db_xref="GOA:Q8Z937"
FT                   /db_xref="InterPro:IPR006090"
FT                   /db_xref="InterPro:IPR006091"
FT                   /db_xref="InterPro:IPR006092"
FT                   /db_xref="InterPro:IPR009075"
FT                   /db_xref="InterPro:IPR009100"
FT                   /db_xref="InterPro:IPR013764"
FT                   /db_xref="InterPro:IPR013786"
FT                   /db_xref="InterPro:IPR015396"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z937"
FT                   /protein_id="CAD08779.1"
FT                   /translation="MMILSIIATVVLLGALFYHRVSLFLSSLILLAWTAALGVAGLWSI
FT                   WLLVPLAIILVPFNLTPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQ
FT                   GKPDWKKLHNYPQPQLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHR
FT                   FFAMIIKKEYGGLEFSAYVQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTEEQK
FT                   NHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGVVCMGEWQGQQVLGMRLTWNKRYIT
FT                   LAPIATVLGLAFKLSDPDRLLGGEEELGITCALIPTSTPGVEIGRRHFPLNVPFQNGPT
FT                   RGNDIFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHI
FT                   RRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHR
FT                   GQQSIIDAMDITGGKGIMLGESNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCH
FT                   PYVLEEMAAAQNNDVNAFDKLLFKHIGHVGSNTVRSFWLGLTRGLTSHTPTGDATKRYY
FT                   QHLNRLSANLALLSDVSMAVLGGSLKRRERISTRLGDVLSQLYLASAVLKRYDDEGRHE
FT                   ADLPLVHWGVQDALYRAEQAMDDLLQNFPNRVVAGLLTAMIFPTGRHYLAPSDKLDHAV
FT                   AKILQVPNATRSRIGRGQYLTPAEHNPVGLLEEALRDVIAADPIHQRICKELGKNLPFT
FT                   RLDELARNALAKGLIDKDEAAILAKAEESRLRSINVDDFEPEALATKPVKLPEKVRKVE
FT                   AA"
FT   misc_feature    complement(112632..112934)
FT                   /note="Pfam match to entry PF00441 Acyl-CoA_dh, Acyl-CoA
FT                   dehydrogenase, score 42.10, E-value 1.6e-11"
FT   CDS             113627..114205
FT                   /transl_table=11
FT                   /gene="STY0355"
FT                   /gene_synonym="gmhA"
FT                   /product="phosphoheptose isomerase"
FT                   /note="Fasta hit to YRAO_ECOLI (196 aa), 40% identity in
FT                   192 aa overlap"
FT                   /note="Orthologue of E. coli gmhA (LPCA_ECOLI); Fasta hit
FT                   to LPCA_ECOLI (192 aa), 97% identity in 192 aa overlap"
FT                   /db_xref="GOA:P63222"
FT                   /db_xref="InterPro:IPR001347"
FT                   /db_xref="InterPro:IPR004515"
FT                   /db_xref="InterPro:IPR020620"
FT                   /db_xref="UniProtKB/Swiss-Prot:P63222"
FT                   /protein_id="CAD08780.1"
FT                   /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGG
FT                   KVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVSNDFGYDYIFSRY
FT                   VEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVP
FT                   HFGYADRIQEIHIKVIHILIQLIEKEMVK"
FT   misc_feature    113738..114202
FT                   /note="Pfam match to entry PF01380 SIS, SIS domain, score
FT                   162.90, E-value 5.4e-45"
FT   CDS             114369..115136
FT                   /transl_table=11
FT                   /gene="STY0356"
FT                   /gene_synonym="yafJ"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yafJ (YAFJ_ECOLI); Fasta hit
FT                   to YAFJ_ECOLI (255 aa), 93% identity in 255 aa overlap"
FT                   /db_xref="GOA:Q8Z936"
FT                   /db_xref="InterPro:IPR000583"
FT                   /db_xref="InterPro:IPR017932"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z936"
FT                   /protein_id="CAD08781.1"
FT                   /translation="MCELLGMSANVPMDICFSFTGLVQRGGGTGPHKDGWGITFYEGKG
FT                   CRTFKDPQPSYHSPIAKLVQNYPIKSCSVIAHIRQANRGEVALENTHPFTRELWGRNWT
FT                   YAHNGQLNGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMTAVFKYIATLA
FT                   TVLREKGVFNMLLSDGRYVMAFCSTHLHWITRRAPFGVATLVDQDMEIDFSSQTTPNDV
FT                   VTVIATQPLTGNETWQKIMPGEWALFCLGERII"
FT   CDS             complement(115107..115847)
FT                   /transl_table=11
FT                   /gene="STY0357"
FT                   /gene_synonym="yafK"
FT                   /product="putative exported protein"
FT                   /note="Orthologue of E. coli yafK (YAFK_ECOLI); Fasta hit
FT                   to YAFK_ECOLI (246 aa), 91% identity in 246 aa overlap"
FT                   /db_xref="InterPro:IPR005490"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XF45"
FT                   /protein_id="CAD08782.1"
FT                   /translation="MRKIAFFLAMLLMPCVSFAGLLSSSSPVTPVSKEYKQQLMGSPVY
FT                   IQIFKEERTLDLYVKMGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLK
FT                   PDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALV
FT                   FGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYV
FT                   VSKPLSHEVVQPQLASNYTLSEAK"
FT   CDS             116097..117152
FT                   /transl_table=11
FT                   /gene="STY0358"
FT                   /gene_synonym="dinP"
FT                   /product="hypothetical protein DinP (DNA damage-inducible
FT                   protein)"
FT                   /note="Orthologue of E. coli dinP (DINP_ECOLI); Fasta hit
FT                   to DINP_ECOLI (351 aa), 91% identity in 351 aa overlap"
FT                   /db_xref="GOA:P63990"
FT                   /db_xref="InterPro:IPR001126"
FT                   /db_xref="InterPro:IPR017961"
FT                   /db_xref="InterPro:IPR017962"
FT                   /db_xref="InterPro:IPR017963"
FT                   /db_xref="UniProtKB/Swiss-Prot:P63990"
FT                   /protein_id="CAD08783.1"
FT                   /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTAN
FT                   YPARQFGVRSAMPTAMALKLCPHLTLLPGRFDAYKEASRHVRDIFSRYTSLIEPLSLDE
FT                   AWLDVTDSPHCYGSATLIAREIRQTIFNELQLTASAGVAPVKFLAKIASDLNKPNGQYV
FT                   ITPADVPDFLKTLPLAKIPGVGKVSAAKLENMGLRTCGDIQQCDLAMLLKRFGKFGRVL
FT                   WERSQGIDERDVNSERLRKSVGVERTLAEDIHEWSDCEAIIEHLYPELERRLAIVKPDL
FT                   LIARQGVKLKFNDFQQTTQEHVWPQLNKEDLITTARKTWDERRGERGVRLVGLHVTLLD
FT                   PQLERQLVLGL"
FT   misc_feature    116115..117119
FT                   /note="Pfam match to entry PF00817 IMS, impB/mucB/samB
FT                   family, score 453.60, E-value 1.7e-132"
FT   CDS             117371..118510
FT                   /transl_table=11
FT                   /gene="STY0359"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to N-terminus of Escherichia coli
FT                   hypothetical 17.6 kDa protein in dinp-rrfh intergenic
FT                   region yafP TR:Q9WVU0 (EMBL:D83536) (181 aa) fasta scores:
FT                   E(): 4.5e-17, 81.0% id in 63 aa, and to many hypothetical
FT                   proteins e.g. Listeria monocytogenes hypothetical 43.6 kDa
FT                   protein TR:Q9RLU0 (EMBL:Y16468) (392 aa) fasta scores: E():
FT                   3.5e-09, 26.7% id in 409 aa, and to Pyrococcus abyssi
FT                   hypothetical 102.5 kDa protein pab0383 TR:Q9V168
FT                   (EMBL:AJ248284) (916 aa) fasta scores: E(): 1.8e-05, 30.3%
FT                   id in 363 aa"
FT                   /note="Fasta hit to RTCB_ECOLI (408 aa), 31% identity in
FT                   410 aa overlap"
FT                   /db_xref="InterPro:IPR001233"
FT                   /db_xref="InterPro:IPR017510"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z935"
FT                   /protein_id="CAD08784.1"
FT                   /translation="MGNYIRPLSDVVFSIASDNLWIEDSAIQQLYTTAKLTGMKRVIGM
FT                   PDLHPGRGYPIGAAFFSRGRFYPALVGNDIGCGMALWQTDILGRKYNADKLEKRLASLP
FT                   DVADAQWLEENVPAVMQHHSWRSALGSIGGGNHFAELQQVDRIVDADSFALSGLQKAQL
FT                   LLLVHSGSRGLGQAILRRHVEAFSHNGLPEDSDDARHYLAEHDDALAFARSNRALIARR
FT                   ILQQLRAEGEPRLDVAHNFVEPCTVAGEAGWLHRKGATPDGQGLVIIPGSRGDYSWLVK
FT                   PVVSEESLFSLAHGAGRKWMRTECKDRLSAKFTPRQLCRTGMGSRVICRDRQLIYEEAP
FT                   QAYKSIDSVVDCLADAGLITPVACLRPVLTLKTSGEKSA"
FT   misc_feature    117386..118489
FT                   /note="Pfam match to entry PF01139 UPF0027, Uncharacterized
FT                   protein family UPF0027, score 44.30, E-value 4.8e-12"
FT   CDS             118507..119121
FT                   /transl_table=11
FT                   /gene="prfH"
FT                   /gene_synonym="STY0360"
FT                   /product="putative peptide chain release factor"
FT                   /note="Similar to Escherichia coli peptide chain release
FT                   factor homologue prfH SW:RFH_ECOLI (P28369; P77246) (141
FT                   aa) fasta scores: E(): 0, 81.9% id in 138 aa, and to
FT                   Treponema pallidum peptide chain release factor 2 PrfB
FT                   SW:RF2_TREPA (O83585) (368 aa) fasta scores: E(): 2.8e-12,
FT                   33.0% id in 206 aa, and to Haemophilus influenzae peptide
FT                   chain release factor 2 prfb or hi1212 SW:RF2_HAEIN (P43918)
FT                   (365 aa) fasta scores: E(): 9.8e-10, 37.2% id in 129 aa"
FT                   /db_xref="GOA:Q8XFV3"
FT                   /db_xref="InterPro:IPR000352"
FT                   /db_xref="InterPro:IPR017509"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFV3"
FT                   /protein_id="CAD08785.1"
FT                   /translation="MILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPG
FT                   RLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRFSADEHI
FT                   QSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAW
FT                   RLEQQRQNECAALKSERRLFHHQIERGNPLRIFKGMAFTPQ"
FT   misc_feature    118789..119112
FT                   /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA
FT                   hydrolase domain, score 143.30, E-value 4.3e-39"
FT   misc_feature    118849..118899
FT                   /note="PS00745 Prokaryotic-type class I peptide chain
FT                   release factors signature"
FT   CDS             complement(119276..120733)
FT                   /transl_table=11
FT                   /gene="STY0361"
FT                   /gene_synonym="pepD"
FT                   /product="aminoacyl-histidine dipeptidase precursor"
FT                   /note="Orthologue of E. coli pepD (PEPD_ECOLI); Fasta hit
FT                   to PEPD_ECOLI (484 aa), 92% identity in 484 aa overlap"
FT                   /db_xref="GOA:Q8Z934"
FT                   /db_xref="InterPro:IPR001160"
FT                   /db_xref="InterPro:IPR002933"
FT                   /db_xref="InterPro:IPR011650"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z934"
FT                   /protein_id="CAD08786.1"
FT                   /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIVSWAKEKGL
FT                   YVDRDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNSDTVHDFTTDPIRPYIDGEW
FT                   VKARGTTLGADNGIGMASALAVLADDNVVHGPLEVLLTMTEEAGMDGAFGLQSGWLQAD
FT                   ILINTDSEEEGEIYMGCAGGIDFTSNLPLTREAVPAGFACFKLTLKGLKGGHSGGEIHL
FT                   GLGNANKLLARFLAGHAEELDLRLIDFNGGTLRNAIPREAFATLAVATDNVGALKTLVN
FT                   AYQDILKNELAEKEKNLTLQLNEVASDKAALTAPSRDTFVRLLNATPNGVIRNSDVAKG
FT                   VVETSLNVGVVTMSDANVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGSYPGW
FT                   QPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPDMDMVSIGPTITGPHS
FT                   PDEQVHIESVGHYWTLLTELLKAIPAK"
FT   misc_feature    complement(119519..119788)
FT                   /note="Pfam match to entry PF01546 Peptidase_M20, Peptidase
FT                   family M20/M25/M40, score 7.50, E-value 0.31"
FT   misc_feature    complement(119984..120688)
FT                   /note="Pfam match to entry PF01546 Peptidase_M20, Peptidase
FT                   family M20/M25/M40, score 80.20, E-value 4.3e-22"
FT   CDS             120982..121440
FT                   /transl_table=11
FT                   /gene="STY0362"
FT                   /gene_synonym="gpt"
FT                   /product="xanthine-guanine phosphoribosyltransferase"
FT                   /note="Orthologue of E. coli gpt (XGPT_ECOLI); Fasta hit to
FT                   XGPT_ECOLI (152 aa), 98% identity in 152 aa overlap"
FT                   /db_xref="GOA:P0A278"
FT                   /db_xref="InterPro:IPR000836"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A278"
FT                   /protein_id="CAD08787.1"
FT                   /translation="MSEKYVVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGAL
FT                   LARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMY
FT                   PKAHFVTIFAKPAGRPLVDDYVIDIPQNTWIEQPWDMGVVFVPPISGR"
FT   misc_feature    120988..121389
FT                   /note="Pfam match to entry PF00156 Pribosyltran,
FT                   Phosphoribosyl transferase domain, score 51.80, E-value
FT                   1.5e-11"
FT   misc_feature    121231..121269
FT                   /note="PS00103 Purine/pyrimidine phosphoribosyl
FT                   transferases signature"
FT   CDS             121529..122773
FT                   /transl_table=11
FT                   /gene="STY0363"
FT                   /gene_synonym="yafA"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yafA (YAFA_ECOLI); Fasta hit
FT                   to YAFA_ECOLI (433 aa), 89% identity in 396 aa overlap"
FT                   /db_xref="GOA:Q8Z933"
FT                   /db_xref="InterPro:IPR010520"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z933"
FT                   /protein_id="CAD08788.1"
FT                   /translation="MTQANLSETLFKPRFKHTETSTLVRRFNRGSQPPMQSALDGKNVP
FT                   HWYRMINRLMWIWRGVDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWAKQ
FT                   AMDWQQKACQEQDAMRSGRYWLHASTLYNIAAYPHLKGDELAEQAQALANRAYEEAAQR
FT                   LPGSLREMEFAVPGGSPVTAFLHMPKGDGPFPTVLMCGGLDAMQIDYYTLYERYFAPRG
FT                   IAMLTLDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVR
FT                   LAYLEAPRLKAVACLGPVVHALLSDPQRQSTVPEMYLDVLASRLGMHDASDEALRVELN
FT                   RYSLKVQGLLGRRCPTPMLSGFWKNDPFSPEEESRLITTSSSDGKLIEIPFNPVYRNFD
FT                   HALQEITDWINHRLC"
FT   CDS             122831..123232
FT                   /transl_table=11
FT                   /gene="STY0364"
FT                   /gene_synonym="crl"
FT                   /product="curlin genes transcriptional activator"
FT                   /note="Orthologue of E. coli crl (CRL_ECOLI); Fasta hit to
FT                   CRL_ECOLI (132 aa), 84% identity in 132 aa overlap"
FT                   /db_xref="GOA:Q8XH11"
FT                   /db_xref="InterPro:IPR009986"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8XH11"
FT                   /protein_id="CAD08789.1"
FT                   /translation="MTLPSGHPKSRLIKKFTALGPYIREGQCEDNRFFFDCLAVCVNVK
FT                   PAPEKREFWGWWMELEAQEKRFTYRYQFGLFDKEGNWTVVPINETEVVERLEYTLREFH
FT                   EKLRDLLISMELALEPSDDFNDEPVKLSA"
FT   CDS             complement(123283..124335)
FT                   /transl_table=11
FT                   /gene="STY0365"
FT                   /gene_synonym="phoE"
FT                   /product="outer membrane pore protein E precursor"
FT                   /note="Fasta hit to OMPC_ECOLI (367 aa), 56% identity in
FT                   372 aa overlap"
FT                   /note="Fasta hit to YEDS_ECOLI (397 aa), 55% identity in
FT                   400 aa overlap"
FT                   /note="Fasta hit to OMPN_ECOLI (377 aa), 59% identity in
FT                   378 aa overlap"
FT                   /note="Fasta hit to OMPF_ECOLI (362 aa), 56% identity in
FT                   364 aa overlap"
FT                   /note="Fasta hit to NMPC_ECOLI (365 aa), 60% identity in
FT                   367 aa overlap"
FT                   /note="Orthologue of E. coli phoE (PHOE_ECOLI); Fasta hit
FT                   to PHOE_ECOLI (351 aa), 88% identity in 351 aa overlap"
FT                   /db_xref="GOA:Q56119"
FT                   /db_xref="InterPro:IPR001702"
FT                   /db_xref="InterPro:IPR001897"
FT                   /db_xref="InterPro:IPR013793"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q56119"
FT                   /protein_id="CAD08790.1"
FT                   /translation="MNKSTLAIVVSIIASASVHAAEVYNKNGNKLDVYGKVKAMHYMSD
FT                   YDSKDGDQSYVRFGFKGETQINDQLTGYGRWEAEFAGNKAESDSSQQKTRLAFAGLKLK
FT                   DIGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGIVD
FT                   GLDLTLQYQGKNEDRDVKKQNGDGFGTSVSYDFGGSDFAVSGAYTLSDRTREQNLQRRG
FT                   TGDKAEAWATGVKYDANDIYIATFYSETRNMTPVSGGFANKTQNFEAVIQYQFDFGLRP
FT                   SLGYVLSKGKDIEGVGSEDLVNYIDVGAIYYFNKNMSAFVDYKINQLDSDNTLGINDDD
FT                   IVAIGLTYQF"
FT   misc_feature    complement(123286..124260)
FT                   /note="Pfam match to entry PF00267 Gram-ve_porins, General
FT                   diffusion Gram-negative porins, score 648.60, E-value
FT                   1.1e-197"
FT   misc_feature    complement(123373..123423)
FT                   /note="PS00576 General diffusion Gram-negative porins
FT                   signature"
FT   CDS             124618..125721
FT                   /transl_table=11
FT                   /gene="STY0366"
FT                   /gene_synonym="proB"
FT                   /product="glutamate 5-kinase"
FT                   /note="Orthologue of E. coli proB (PROB_ECOLI); Fasta hit
FT                   to PROB_ECOLI (367 aa), 97% identity in 367 aa overlap"
FT                   /db_xref="GOA:P65793"
FT                   /db_xref="InterPro:IPR001048"
FT                   /db_xref="InterPro:IPR001057"
FT                   /db_xref="InterPro:IPR002478"
FT                   /db_xref="InterPro:IPR005715"
FT                   /db_xref="InterPro:IPR011529"
FT                   /db_xref="InterPro:IPR015947"
FT                   /db_xref="InterPro:IPR019797"
FT                   /db_xref="UniProtKB/Swiss-Prot:P65793"
FT                   /protein_id="CAD08791.1"
FT                   /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRI
FT                   VIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLT
FT                   RADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNLSALAAILAGAD
FT                   KLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGTGGMSTKLQAAD
FT                   VACRAGIDTIIASGSKPGVIGDVMEGISVGTRFHAQASPLENRKRWIFGAPPAGEITVD
FT                   EGATAAMLERGSSLLPKGIKSVTGNFSRGEVIRICNLQGRDIAHGVSRYNSDALRRIAG
FT                   HHSQQIDAILGYEYGPVAVHRDDMITR"
FT   misc_feature    124630..125208
FT                   /note="Pfam match to entry PF00696 aakinase, Amino acid
FT                   kinase family, score 222.70, E-value 5.5e-63"
FT   misc_feature    125236..125301
FT                   /note="PS00902 Glutamate 5-kinase signature"
FT   misc_feature    125443..125667
FT                   /note="Pfam match to entry PF01472 PUA, PUA domain, score
FT                   93.90, E-value 3.2e-24"
FT   misc_feature    125733..126965
FT                   /note="Pfam match to entry PF00171 aldedh, Aldehyde
FT                   dehydrogenase family, score -212.90, E-value 7.3e-05"
FT   CDS             125733..126983
FT                   /transl_table=11
FT                   /gene="STY0367"
FT                   /gene_synonym="proA"
FT                   /product="gamma-glutamyl phosphate reductase"
FT                   /note="Orthologue of E. coli proA (PROA_ECOLI); Fasta hit
FT                   to PROA_ECOLI (417 aa), 86% identity in 417 aa overlap"
FT                   /db_xref="GOA:Q8Z932"
FT                   /db_xref="InterPro:IPR000965"
FT                   /db_xref="InterPro:IPR012134"
FT                   /db_xref="InterPro:IPR016161"
FT                   /db_xref="InterPro:IPR016162"
FT                   /db_xref="InterPro:IPR016163"
FT                   /db_xref="InterPro:IPR020593"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z932"
FT                   /protein_id="CAD08792.1"
FT                   /translation="MLEQMGIAAKAASYKLALLSSCEKNRVLEKIADELEAQMESILSA
FT                   NVQDVEQARANGLSEAMLDRLALTPARLKAIADDVRQVCNLADPAGQVIDGGLLDSGLR
FT                   LERRRVPLGVVGVIYEARPNVTVDVASLCLKTGNAVILRGGKETHRTNAATVLVIQKAL
FT                   KACDLPEAAVQAIDNPDRSLVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGI
FT                   GVCHIFVDSSADIAPALKIIVNAKTQRPSTCNTVETLLVHQDIAERFLPALSKQMAESG
FT                   VTLHGDETVMQALHGPAKLVALKPEELDNEFLSLDLNVVVVENMDGAIAHIREHGTQHS
FT                   DAILTCDMHNAARFVNEVDSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLE
FT                   ALTTYKWIGFGDGTIRA"
FT   misc_feature    126696..126761
FT                   /note="PS01223 Gamma-glutamyl phosphate reductase
FT                   signature"
FT   tRNA            127099..127174
FT                   /note="tRNA Thr anticodon CGT, Cove score 91.49"
FT   CDS             127398..127796
FT                   /transl_table=11
FT                   /gene="STY0368"
FT                   /product="probable secreted protein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z931"
FT                   /protein_id="CAD08793.1"
FT                   /translation="MKLIIILLLALFPLCSSASNHYALVFENNTILLVLNLKCSPCDLN
FT                   CANIQYQLFNKETESVISGAAKPVTTGIENNFRGYMMRNNNTFYSLIESDNKNVWDMSV
FT                   EEKGTQQNKDAVQKVKYQLNAIFDNGTC"
FT   CDS             complement(127844..128602)
FT                   /transl_table=11
FT                   /gene="stbE"
FT                   /gene_synonym="STY0369"
FT                   /product="fimbrial chaperone protein"
FT                   /note="Similar to Klebsiella pneumoniae chaperone protein
FT                   MrkB precursor mrkB SW:MRKB_KLEPN (P21646) (233 aa) fasta
FT                   scores: E(): 9.3e-21, 32.4% id in 204 aa, and to Bordetella
FT                   pertussis chaperone protein fimb/fhad precursor fimb or
FT                   fhaD SW:FIMB_BORPE (P33409) (244 aa) fasta scores: E():
FT                   1.8e-18, 31.7% id in 221 aa"
FT                   /note="Fasta hit to YRAI_ECOLI (231 aa), 32% identity in
FT                   222 aa overlap"
FT                   /note="Fasta hit to ECPD_ECOLI (246 aa), 32% identity in
FT                   213 aa overlap"
FT                   /note="Fasta hit to SFMC_ECOLI (230 aa), 30% identity in
FT                   207 aa overlap"
FT                   /note="Fasta hit to YBGP_ECOLI (242 aa), 31% identity in
FT                   229 aa overlap"
FT                   /note="Paralogue of E. coli fimC (FIMC_ECOLI); Fasta hit to
FT                   FIMC_ECOLI (241 aa), 31% identity in 218 aa overlap"
FT                   /db_xref="GOA:Q8Z930"
FT                   /db_xref="HSSP:1QPX"
FT                   /db_xref="InterPro:IPR001829"
FT                   /db_xref="InterPro:IPR008962"
FT                   /db_xref="InterPro:IPR016147"
FT                   /db_xref="InterPro:IPR016148"
FT                   /db_xref="InterPro:IPR018046"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z930"
FT                   /protein_id="CAD08794.1"
FT                   /translation="MRNYRQWLVFSKVILTLLGLTGWYGPAQAAVNIDRTRIIFASDEV
FT                   AQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSS
FT                   RQQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEK
FT                   KLRFIAKENTIRIVNPTSWYMSLTLTMDNKKSIGDIMVAPKTALDVPLTRSPTPGASIN
FT                   YAVINDSGNWRQYTAILEKYISKSNFIPEF"
FT   misc_feature    complement(127913..128497)
FT                   /note="Pfam match to entry PF00345 pili_assembly,
FT                   Gram-negative pili assembly chaperone, score 156.20,
FT                   E-value 4.1e-45"
FT   misc_feature    complement(128228..128281)
FT                   /note="PS00635 Gram-negative pili assembly chaperone
FT                   signature"
FT   CDS             complement(128568..129893)
FT                   /transl_table=11
FT                   /gene="stbD"
FT                   /gene_synonym="STY0370"
FT                   /product="putative fimbrial protein"
FT                   /note="Similar to Yersinia pestis protein showing
FT                   similarity with pilin TR:Q9ZC29 (EMBL:AL031866) (449 aa)
FT                   fasta scores: E(): 1.3e-16, 28.6% id in 420 aa"
FT                   /db_xref="GOA:Q8Z929"
FT                   /db_xref="InterPro:IPR008966"
FT                   /db_xref="InterPro:IPR011228"
FT                   /db_xref="InterPro:IPR014779"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z929"
FT                   /protein_id="CAD08795.1"
FT                   /translation="MLFSFRTLLFITSLFVSAGTWSSCIKVTDKSALSDAAIKAGYTAQ
FT                   NWIGALDTNTGNIGLPTVISISNSETFQPSGTLLASGIGNFLTAATGTPYSSKQVLYRC
FT                   DSADAGKLYEMYSTNGDSAFAGAFFTPEVEGAYYDVERNVAVRMTNLSTGEYYSRFWKE
FT                   RQLTADSWFQDDKYIYIPASAFSNVLYEMFKIDSRKYFAYQNPMDRDTWTQPRGYIAFK
FT                   GPGLITERIKAGLDHASDYYGWPSYWPGAWSTYNSVTYVRGALCKITDYPAIVKIPPVA
FT                   VGILAAGGNSQAPFHVSLECESGAVSSALPSTSAANVAMGFVVNQPTAVAAARRLGLTT
FT                   SAGGLSWLLDTHYGEPGVASGVGIRIYNDAGTPINLLPDRIKTGTGNARGWYGYKDLTT
FT                   RVSSGSVETYSGDFTASLEALGGQTVTAGSVNAQLQAVVSFQ"
FT   misc_feature    complement(128571..129113)
FT                   /note="Pfam match to entry PF00419 Fimbrial, Fimbrial
FT                   proteins, score -31.50, E-value 0.011"
FT   misc_feature    complement(129822..129854)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             complement(129898..132459)
FT                   /transl_table=11
FT                   /gene="stbC"
FT                   /gene_synonym="STY0371"
FT                   /product="outer membrane fimbrial usher protein"
FT                   /note="Similar to Escherichia coli outer membrane usher
FT                   protein FimD precursor fimD SW:FIMD_ECOLI (P30130) (878 aa)
FT                   fasta scores: E(): 0, 31.7% id in 877 aa, and to Salmonella
FT                   typhimurium outer membrane usher protein FimD precursor
FT                   fimD SW:FIMD_SALTY (P37924) (870 aa) fasta scores: E(): 0,
FT                   32.7% id in 860 aa"
FT                   /note="Fasta hit to YCBS_ECOLI (866 aa), 31% identity in
FT                   872 aa overlap"
FT                   /note="Fasta hit to YRAJ_ECOLI (838 aa), 32% identity in
FT                   840 aa overlap"
FT                   /note="Fasta hit to HTRE_ECOLI (865 aa), 31% identity in
FT                   853 aa overlap"
FT                   /note="Fasta hit to SFMD_ECOLI (867 aa), 32% identity in
FT                   856 aa overlap"
FT                   /note="Paralogue of E. coli fimD (FIMD_ECOLI); Fasta hit to
FT                   FIMD_ECOLI (878 aa), 32% identity in 868 aa overlap"
FT                   /db_xref="GOA:Q8Z928"
FT                   /db_xref="InterPro:IPR000015"
FT                   /db_xref="InterPro:IPR018030"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z928"
FT                   /protein_id="CAD08796.1"
FT                   /translation="MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNI
FT                   ARFNEQQTPSGDYLADVYVNGTLVASSTNIRFNAVKEGQQAEPCLPLSVMKAAQIKSLP
FT                   ETDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALALF
FT                   LRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNS
FT                   VRTWVQRPVASINSILSLGDSYTDSSLFGSLSFNGVKLVTDERMRPQGKRGYAPEVRGV
FT                   AASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYS
FT                   SVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWL
FT                   AGGVWATGMGAFGLNATWSNARAEHNERQQGWRAELSYSKTFTTGTNLVLAAYRYSTNG
FT                   FRDLQDVLGVRREAKTGIDYYSDTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQS
FT                   RITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLDVSSRQKYTETTMSFNV
FT                   SIPLDWGENRTSVAMNYNQSSQSRSSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSS
FT                   APTTFGGNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALI
FT                   HADGAQGAIVQNGQGAVVDRFGYAILPSLSPYRINNVTLDTRKMRSDAELTGGNQQIVP
FT                   YAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMVGQSGQIYARIAH
FT                   PSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE"
FT   misc_feature    complement(129952..132375)
FT                   /note="Pfam match to entry PF00577 Usher, Fimbrial Usher
FT                   proteins, score 852.20, E-value 1.8e-252"
FT   misc_feature    complement(131524..131556)
FT                   /note="PS01151 Fimbrial biogenesis outer membrane usher
FT                   protein signature"
FT   CDS             complement(132443..133204)
FT                   /transl_table=11
FT                   /gene="stbB"
FT                   /gene_synonym="STY0372"
FT                   /product="fimbrial chaperone protein"
FT                   /note="Similar to Escherichia coli chaperone protein EcpD
FT                   precursor ecpD SW:ECPD_ECOLI (P33128) (246 aa) fasta
FT                   scores: E(): 7.4e-32, 40.3% id in 248 aa, and to Bordetella
FT                   pertussis chaperone protein fimb/fhad precursor fimb or
FT                   fhaD SW:FIMB_BORPE (P33409) (244 aa) fasta scores: E():
FT                   3.2e-24, 38.5% id in 208 aa"
FT                   /note="Fasta hit to YEHC_ECOLI (239 aa), 39% identity in
FT                   258 aa overlap"
FT                   /note="Fasta hit to YFCS_ECOLI (250 aa), 34% identity in
FT                   233 aa overlap"
FT                   /note="Fasta hit to SFMC_ECOLI (230 aa), 33% identity in
FT                   236 aa overlap"
FT                   /note="Paralogue of E. coli ecpD (ECPD_ECOLI); Fasta hit to
FT                   ECPD_ECOLI (246 aa), 40% identity in 247 aa overlap"
FT                   /db_xref="GOA:Q8Z927"
FT                   /db_xref="HSSP:1P5U"
FT                   /db_xref="InterPro:IPR001829"
FT                   /db_xref="InterPro:IPR008962"
FT                   /db_xref="InterPro:IPR016147"
FT                   /db_xref="InterPro:IPR016148"
FT                   /db_xref="InterPro:IPR018046"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z927"
FT                   /protein_id="CAD08797.1"
FT                   /translation="MKMDTRHSALYYLIVFLLLALPATASWASVTILGSRIIYPSTASS
FT                   VDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMPFIATPPVFRIQPKAGQVVRVIYNN
FT                   TKKLPQDRESVFWFNVLQVPPTNIGSDSGKNKMLVMLRSRIKLFYRPDGLGKPDNLAKK
FT                   LQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGK
FT                   RSLKSFSGTVTVTLVNDLGARISESYDVPHH"
FT   misc_feature    complement(132482..133102)
FT                   /note="Pfam match to entry PF00345 pili_assembly,
FT                   Gram-negative pili assembly chaperone, score 198.90,
FT                   E-value 1e-57"
FT   misc_feature    complement(132830..132883)
FT                   /note="PS00635 Gram-negative pili assembly chaperone
FT                   signature"
FT   CDS             complement(133266..133802)
FT                   /transl_table=11
FT                   /gene="stbA"
FT                   /gene_synonym="STY0373"
FT                   /product="probable fimbrial protein"
FT                   /note="Similar to Yersinia pestis similar to pilin
FT                   precursor f17d-a TR:Q9ZC32 (EMBL:AL031866) (176 aa) fasta
FT                   scores: E(): 2.2e-24, 45.5% id in 176 aa, and to
FT                   Escherichia coli F17A fimbrial subunit precursor f17A
FT                   TR:Q9RH94 (EMBL:AF055308) (181 aa) fasta scores: E():
FT                   6.7e-16, 39.9% id in 183 aa"
FT                   /db_xref="GOA:Q8Z926"
FT                   /db_xref="InterPro:IPR000259"
FT                   /db_xref="InterPro:IPR008966"
FT                   /db_xref="InterPro:IPR014779"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z926"
FT                   /protein_id="CAD08798.1"
FT                   /translation="MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVING
FT                   NQAKPVVLLPTVSTKELSEQGKTAGPITFDIGLSGCTGSKDKTTKISTVFVGNQVTSNG
FT                   NLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTGKAE
FT                   AGTVAATLQYAVSYK"
FT   misc_feature    complement(133269..133727)
FT                   /note="Pfam match to entry PF00419 Fimbrial, Fimbrial
FT                   proteins, score 75.70, E-value 9.7e-19"
FT   CDS             134465..135199
FT                   /transl_table=11
FT                   /gene="STY0374"
FT                   /product="possible transmembrane regulator"
FT                   /note="Similar to Vibrio parahaemolyticus cholera toxin
FT                   homolog transcriptional activator toxR SW:TOXR_VIBPA
FT                   (Q05938) (292 aa) fasta scores: E(): 0.007, 25.6% id in 125
FT                   aa, and weakly to Salmonella typhimurium putative
FT                   transcriptional regulator MarT marT TR:Q9Z623
FT                   (EMBL:AF106566) (285 aa) fasta scores: E(): 0.1, 20.6% id
FT                   in 214 aa, and to Vibrio cholerae cholera toxin
FT                   transcriptional activator toxR SW:TOXR_VIBCH (P15795) (294
FT                   aa) fasta scores: E(): 0.73, 23.9% id in 109 aa"
FT                   /db_xref="GOA:Q8Z925"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z925"
FT                   /protein_id="CAD08799.1"
FT                   /translation="MNESIFLLDKRVVFDSTKMTLSHGNEIIRISEADTHLLLAFWHGL
FT                   YKKEDIIHFVWENRGGCVSESSYYKLINQMRNDFSSIGLQLSGIVTRPRVGVSLSVAIE
FT                   PIKKITSLKVSDENVKGPSTREKIFYKIKRHSVFVVLTGAILLALFYGVFTIYKTPVRN
FT                   SPDSFFTYLGEYNDYAIYKTKEDKVTLSEVVFAFNSLKIKIYRQNGRHLYYIREPNMNI
FT                   FLQCLNPVEMAVPKCITVKERY"
FT   CDS             135344..135673
FT                   /transl_table=11
FT                   /gene="STY0375"
FT                   /product="hypothetical protein"
FT                   /note="Similar to Salmonella typhimurium hypothetical 18.5
FT                   kDa protein TR:Q9RFV3 (EMBL:AF166275) (162 aa) fasta
FT                   scores: E(): 2.3e-13, 49.4% id in 81 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z924"
FT                   /protein_id="CAD08800.1"
FT                   /translation="MVDLCWILNPAGLPYTTMLLPIRKRNGFFFRDICISKLRRTGMKT
FT                   FTFKVNSVKTFESDTAGDLFSWLRLLQPGTINELKIVKIGKNTYMFSLNRHLYNVCTTS
FT                   SNVEL"
FT   CDS             135985..137559
FT                   /transl_table=11
FT                   /gene="STY0376"
FT                   /product="putative rtn protein"
FT                   /note="Similar to Escherichia coli rtn protein SW:RTN_ECOLI
FT                   () (518 aa) fasta scores: E(): 0, 30.7% id in 514 aa, and
FT                   to Escherichia coli hypothetical 60.8 kDa protein in
FT                   ssb-soxs intergenic region yjcC SW:YJCC_ECOLI (P32701;
FT                   P76789) (528 aa) fasta scores: E(): 3.1e-30, 25.8% id in
FT                   530 aa"
FT                   /db_xref="InterPro:IPR001633"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z923"
FT                   /protein_id="CAD08801.1"
FT                   /translation="MKVRKLFLMLFIAVPLIVMILVGLLAGIFQLKRDIAVSANTLLRF
FT                   SADISAASWQVAGKAARLAESSCTDTLKELSRTRAFTPYVRDIGFLENGDITCSFVTGT
FT                   ERYHFSRLAGLSLPASYPERWLRSIGSMAEGPDRLVVVYVKKVAADKAAFVIVDSQYVQ
FT                   ELMEILAAERASAFSLIFGAGEAITSAATLRGKAFLTQRFTSTDHTIQLMVRTPFSTLS
FT                   AYWLQNLFIFIPLSLCLSVGMILFYRRWYLKRLSLAREISRGITHNEFTVHYQPVFNVK
FT                   HGSCGGVEALMRWPQPDGRFITPDIFITAAENEGMIIPLSRHLFELIAHDVINWTVPDD
FT                   FYISVNISPAHLMDDGFIQDIEALRTRLGTITLMLELTERSLIVEPSQVAEKLSTLREK
FT                   GVLIAIDDFGTGYCSLSYLQQLPVDSLKIDRTFIDTIDTSSDDVPVLDTIITLSQRLGL
FT                   NVVAEGVSTQHQLRYILSHGVGFVQGFLYARPMGTNDFMSWLGKSAQRQNGLLKGESGS
FT                   ASDLVAE"
FT   misc_feature    136741..137469
FT                   /note="Pfam match to entry PF00563 DUF2, Domain of unknown
FT                   function 2, score 205.70, E-value 7.3e-58"
FT   CDS             137659..138402
FT                   /transl_table=11
FT                   /gene="STY0377"
FT                   /product="possible transmembrane regulator"
FT                   /note="Similar to Vibrio hollisae transmembrane regulatory
FT                   protein ToxR toxR TR:Q9RHQ9 (EMBL:AB027503) (292 aa) fasta
FT                   scores: E(): 0.0019, 26.8% id in 153 aa, and to Vibrio
FT                   parahaemolyticus cholera toxin homolog transcriptional
FT                   activator toxR SW:TOXR_VIBPA (Q05938) (292 aa) fasta
FT                   scores: E(): 0.042, 25.2% id in 143 aa"
FT                   /db_xref="GOA:Q8Z922"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR016032"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z922"
FT                   /protein_id="CAD08802.1"
FT                   /translation="MSQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEGL
FT                   FKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFDKIGLKGESVVTRPRVGVLLSVSIE
FT                   PLSDEAQDMPLPAVAETELSTVEVRHDDTIIPPIPGAVNRKDWLYFCLAALLMFFMIYK
FT                   VKGENIDYFTLNGSYDGYTFYSVGHDKTHLADIIEAYSEMSNEIHKQNGKIIYYIRVPN
FT                   TNIFVQCLNQLDIAEPKCISIKERY"
FT   CDS             138375..138923
FT                   /transl_table=11
FT                   /gene="STY0378"
FT                   /product="hypothetical protein"
FT                   /note="Similar to Salmonella typhimurium hypothetical 18.5
FT                   kDa protein TR:Q9RFV3 (EMBL:AF166275) (162 aa) fasta
FT                   scores: E(): 0, 97.4% id in 151 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z921"
FT                   /protein_id="CAD08803.1"
FT                   /translation="MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTT
FT                   RTVTTIQPKDIHADGSLVLDFKMKRITLQYEIKTKDNGVKILYRDVYMKNLHRTAPGVY
FT                   TFEVSQVKVFATDTAGDLLSYLRVLHPEAANEIRISKVGEKTFFILLIGSFITFVPRSR
FT                   SECCLNASESELRNCPRQG"
FT   CDS             139264..139788
FT                   /transl_table=11
FT                   /gene="STY0380"
FT                   /product="possible outer membrane protein"
FT                   /note="Similar to Salmonella typhimurium hypothetical 19.7
FT                   kDa protein TR:Q9RFV4 (EMBL:AF166275) (174 aa) fasta
FT                   scores: E(): 0, 98.9% id in 174 aa, and to Yersinia
FT                   enterocolitica attachment invasion locus protein precursor
FT                   aiL SW:AIL_YEREN (P16454) (178 aa) fasta scores: E():
FT                   4.3e-20, 40.2% id in 169 aa, and to Escherichia coli outer
FT                   membrane protein x precursor ompX SW:OMPX_ECOLI (P36546)
FT                   (171 aa) fasta scores: E(): 3.3e-15, 39.5% id in 157 aa,
FT                   and to Salmonella typhimurium virulence membrane protein
FT                   pagc precursor. virulence membrane protein pagc precursor
FT                   SW:PAGC_SALTY () (188 aa) fasta scores: E(): 0.0042, 36.0%
FT                   id in 186 aa"
FT                   /note="Paralogue of E. coli ompX (OMPX_ECOLI); Fasta hit to
FT                   OMPX_ECOLI (171 aa), 40% identity in 157 aa overlap"
FT                   /db_xref="GOA:Q8Z920"
FT                   /db_xref="HSSP:1QJ8"
FT                   /db_xref="InterPro:IPR000758"
FT                   /db_xref="InterPro:IPR011250"
FT                   /db_xref="InterPro:IPR017690"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z920"
FT                   /protein_id="CAD08804.1"
FT                   /translation="MKRRSSFLVFLGLLLASPLALANDQHTVSFGYAQTHLSSLKNSDS
FT                   KDLRGFNFKYRYEFNETWGMLGSFTATRNEMENYTWKEGKLHKNGSDSVDYGSLMFGPT
FT                   YRFNDYVSLYGNAGIATMKFNKHSKEESFAYGAGVIFNPVKSISIDASWEASRFFAVDT
FT                   NTFGVSVGYRF"
FT   CDS             140048..140575
FT                   /transl_table=11
FT                   /gene="STY0381"
FT                   /product="possible transcriptionl regulator"
FT                   /note="Similar to Salmonella typhimurium hypothetical 24.8
FT                   kDa protein TR:Q9RFV5 (EMBL:AF166275) (213 aa) fasta
FT                   scores: E(): 0, 99.4% id in 175 aa, and to Klebsiella
FT                   pneumoniae Rmpa2 rmpa2 TR:Q53343 (EMBL:S64176) (212 aa)
FT                   fasta scores: E(): 1.7e-12, 31.9% id in 160 aa, and weakly
FT                   to the C-terminus of Corynebacterium diphtheriae response
FT                   regulator CstA cstA TR:Q9RPE7 (EMBL:AF161328) (233 aa)
FT                   fasta scores: E(): 0.33, 34.3% id in 67 aa, and Salmonella
FT                   typhimurium transcriptional regulatory protein UhpA uhpA
FT                   SW:UHPA_SALTY (P27667) (196 aa) fasta scores: E(): 0.76,
FT                   32.7% id in 55 aa"
FT                   /db_xref="GOA:Q8Z919"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR016032"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z919"
FT                   /protein_id="CAD08805.1"
FT                   /translation="MFPLNGEYNSCQISASEDIIIIIDGRVLIQGVWKGFKALMQHYPH
FT                   ARRIWLTRRDIGKLYPHGCDRDPDIDPDLAKPVFIEHFIKYACANDVAVGEIAPLTKKE
FT                   EELLWHFLYKKSMSQIASSYGISRKTLYIHRLRICRKYGFKRFFHLLFIYQRSRHIFAS
FT                   KICRVDKNADQA"
FT   CDS             140586..140810
FT                   /transl_table=11
FT                   /gene="STY0382"
FT                   /product="probable secreted protein"
FT                   /note="No database matches. Contains N-terminal signal
FT                   sequence"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z918"
FT                   /protein_id="CAD08806.1"
FT                   /translation="MKKLTMRECESINPTLLLAIKILISALDEKTKIRLREHIEKTEQE
FT                   IASSIHDSIMTETFLQQMKDIRYILNIVP"
FT   CDS             140868..141227
FT                   /transl_table=11
FT                   /gene="STY0383"
FT                   /product="probable lipoprotein"
FT                   /note="Similar to Escherichia coli hypothetical 13.1 kDa
FT                   protein in mopa-efp intergenic region precursor yjeI
FT                   SW:YJEI_ECOLI (P39278) (128 aa) fasta scores: E(): 2.1e-08,
FT                   34.5% id in 119 aa. Contains probable N-terminal signal
FT                   sequence and appropriately positioned PS00013 Prokaryotic
FT                   membrane lipoprotein lipid attachment site"
FT                   /note="Fasta hit to YAHO_ECOLI (91 aa), 31% identity in 102
FT                   aa overlap"
FT                   /note="Paralogue of E. coli YJEI_ECOLI; Fasta hit to
FT                   YJEI_ECOLI (128 aa), 35% identity in 119 aa overlap"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z917"
FT                   /protein_id="CAD08807.1"
FT                   /translation="MKKILVCFVGLALTACSANSLNYGAEQVRVMTSEPGKECSYLGDI
FT                   TGSQGNFFTGGWTSNSNLETGARNDLKNKAYKMGDNTVVLLTQRAGQTGSSWHGSGSSK
FT                   QTNVTLSGNVYRCPR"
FT   misc_feature    140883..140915
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             complement(141297..141812)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="STY0384"
FT                   /product="putative outer membrane protein fragment
FT                   (pseudogene)"
FT                   /note="Similar to the C-terminus of Pseudomonas aeruginosa
FT                   outer membrane protein oprm precursor oprm or oprK
FT                   SW:OPRM_PSEAE (Q51487; Q51444) (477 aa) fasta scores: E():
FT                   2.6e-31, 57.1% id in 161 aa, and to Escherichia coli
FT                   probable outer membrane lipoprotein IbeB precursor ibeB
FT                   SW:IBEB_ECOLI (P77211; Q9X444) (457 aa) fasta scores: E():
FT                   1.8e-24, 47.2% id in 161 aa"
FT                   /db_xref="PSEUDO:CAD08808.1"
FT   CDS             complement(141809..142276)
FT                   /transl_table=11
FT                   /gene="STY0385"
FT                   /product="hypothetical protein"
FT                   /note="Questionable CDS; No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z916"
FT                   /protein_id="CAD08809.1"
FT                   /translation="MSHFLWGLSHAKKSEAWLAYRDRPVARPIAIDDYLSRGGKPAFCR
FT                   AAAICSADSDVSMSTRRVAGSVLTVALASRVRIVFFTVLAQPPQVMSSIWNCIVNSFCV
FT                   GTVASLGLVSVGRSSVISGLTDALPVRGDEDGAIPLRYAPPSTGCAAQTPG"
FT   CDS             complement(142222..142377)
FT                   /transl_table=11
FT                   /gene="STY0386"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z915"
FT                   /protein_id="CAD08810.1"
FT                   /translation="MRYLFVIFLYIAGKMLAKIDKSLHIINKAYWHMICHIFYGDYLTQ
FT                   RKAKRG"
FT   CDS             142469..143722
FT                   /transl_table=11
FT                   /gene="STY0387"
FT                   /product="putative metabolite transport protein"
FT                   /note="Similar to Escherichia coli hypothetical metabolite
FT                   transport protein in leux-fece intergenic region yjhB
FT                   SW:YJHB_ECOLI (P39352) (405 aa) fasta scores: E(): 1.4e-29,
FT                   28.7% id in 387 aa, and to Alcaligenes eutrophus probable
FT                   4-methylmuconolactone transporter mmlH SW:MMLH_ALCEU
FT                   (O51798) (428 aa) fasta scores: E(): 2.7e-23, 27.8% id in
FT                   424 aa"
FT                   /db_xref="GOA:Q8Z914"
FT                   /db_xref="InterPro:IPR005829"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="InterPro:IPR016196"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z914"
FT                   /protein_id="CAD08811.1"
FT                   /translation="MYTPLNWTTTQRHVAFASFTSWMLDAFDFFILVFVLSDLAEWFHA
FT                   SVSEVSIAIMLTLAVRPIGALLFGRMAEKYGRRPILMLNILFFTVFELLSAWSPTFMAF
FT                   LIFRVMYGVAMGGIWGVASSLAMETIPDRSRGLMSGIFQAGYPCGYLFASVIFGLFYSM
FT                   VGWRGMFLIGALPVVLLPYIWFKVPESPVWLAARARKENTALLPVLRKQWKLCLYLVLV
FT                   MAFFNFFSHGTQDLYPTFLKMQHGFDPHLISIIAIFYNIAAMLGGIFYGTLSERIGRKK
FT                   AIMIAAFLALPVLPLWAFSSGSFTIGLGAFLMQFMVQGAWGVVPTWLNELVPANARAVL
FT                   PGFVYQLGNLLASVNATLQARIAETHGGNYGLAMAIVAGAVAILICVFVAFGRETRGVV
FT                   ISGTDSDALPESAIGHRT"
FT   misc_feature    142505..143689
FT                   /note="Pfam match to entry PF00083 sugar_tr, Sugar (and
FT                   other) transporter, score 71.30, E-value 2e-17"
FT   misc_feature    142796..142873
FT                   /note="PS00217 Sugar transport proteins signature 2"
FT   CDS             143911..145869
FT                   /transl_table=11
FT                   /gene="mod"
FT                   /gene_synonym="STY0388"
FT                   /product="type III restriction-modification system StyLTI
FT                   enzyme mod"
FT                   /EC_number="2.1.1.72"
FT                   /note="Similar to Salmonella typhimurium type III
FT                   restriction-MoDification system StyLTI enzyme mod moD
FT                   SW:T3MO_SALTY (P40814) (651 aa) fasta scores: E(): 0, 99.1%
FT                   id in 652 aa, and to Escherichia coli type iii
FT                   restriction-MoDification system ecop15i enzyme mod moD
FT                   SW:T3MO_ECOLI (P12364) (645 aa) fasta scores: E(): 0, 31.8%
FT                   id in 688 aa"
FT                   /db_xref="GOA:Q8Z913"
FT                   /db_xref="HSSP:1G60"
FT                   /db_xref="InterPro:IPR002052"
FT                   /db_xref="InterPro:IPR002295"
FT                   /db_xref="InterPro:IPR002941"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z913"
FT                   /protein_id="CAD08812.1"
FT                   /translation="MLKDNQKHNESVAPNSAFLSELQRALPEFFIADRYNEQGELIAKG
FT                   GFDLAKFERALKARNIDELTSGYQIDFIGKDYAKKQAGEKSVTVIVPDVEHNTLAENKN
FT                   SHNLFLTGDNLDVLRHLQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQDMFG
FT                   LNDTELARLKSIQGKSTHSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEYANLKLMMD
FT                   EIFGEGGFVTNVMWKRKKEISNDSDNVSIQGEYILVYAKTGQGALRLEPLSKEYIQKSY
FT                   KEPTEQFPEGKWRPVPLTVSKGLSGGGYTYKITTPNGTVHERLWAYPEASYQKLVADNL
FT                   VYFGKDNGGIPQRVMYAHHSKGQPTTNYWDNVASNKEGKKEILDLFGDNVFDTPKPTAL
FT                   LKKIIKLAIDKDGVVLDFFAGSGTTAHAVMALNEEDGGQRTFILCTIDQALSNNTIAKK
FT                   AGYNTIDEISRERITRVAAKIRANNPATNSDLGFKHYRFATPTQQTLDDLDSFDIATGH
FT                   FINTSGQLAAFTESGFTDMINPFSARGLGVPGGASGEETLLTTWLVADGYKMDIDVQTV
FT                   DFSGYCARYVDNTRLYLIDERWGTEQTRDLLNHIGTHQLPVQTIVIYGYSFDLESIREL
FT                   EIGLKQLDQKVNLVKRY"
FT   misc_feature    144304..144324
FT                   /note="PS00092 N-6 Adenine-specific DNA methylases
FT                   signature"
FT   misc_feature    144493..145326
FT                   /note="Pfam match to entry PF01555 N6_N4_Mtase, DNA
FT                   methylase, score 148.40, E-value 1.3e-40"
FT   misc_feature    144805..144834
FT                   /note="PS00599 Aminotransferases class-II
FT                   pyridoxal-phosphate attachment site"
FT   CDS             145876..148850
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="res"
FT                   /gene_synonym="STY0389"
FT                   /product="type III Restriction-modification system StyLTI
FT                   enzyme res (pseudogene)"
FT                   /note="Similar to Salmonella typhimurium type III
FT                   Restriction-modification system StyLTI enzyme res
FT                   SW:T3RE_SALTY (P40815) (984 aa) fasta scores: E(): 0, 97.2%
FT                   id in 950 aa, and to Bacillus cereus type iii
FT                   ReStriction-modification system enzyme res reS
FT                   SW:T3RE_BACCE (P25241) (412 aa) fasta scores: E(): 0, 57.5%
FT                   id in 360 aa. Contains a single frameshift at aa 176"
FT   CDS             149126..149227
FT                   /transl_table=11
FT                   /gene="STY0391"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFT3"
FT                   /protein_id="CAD08814.1"
FT                   /translation="MLNRYYRFAVEKDDPSEAPESGDKPDSQPQKKS"
FT   CDS             149342..150745
FT                   /transl_table=11
FT                   /gene="STY0392"
FT                   /product="probable terminal oxidase subunit I"
FT                   /note="Similar to Pseudomonas aeruginosa cyanide
FT                   insensitive terminal oxidase cioA TR:O07440 (EMBL:Y10528)
FT                   (488 aa) fasta scores: E(): 0, 73.3% id in 469 aa, and to
FT                   Bacillus subtilis cytochrome d ubiquinol oxidase subunit i
FT                   cydA SW:CYDA_BACSU (P94364) (468 aa) fasta scores: E(): 0,
FT                   35.3% id in 459 aa"
FT                   /note="Fasta hit to CYDA_ECOLI (522 aa), 31% identity in
FT                   525 aa overlap"
FT                   /note="Paralogue of E. coli appC (APPC_ECOLI); Fasta hit to
FT                   APPC_ECOLI (514 aa), 34% identity in 515 aa overlap"
FT                   /db_xref="GOA:Q8Z912"
FT                   /db_xref="InterPro:IPR002585"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z912"
FT                   /protein_id="CAD08815.1"
FT                   /translation="MEFDAFFLARLQFAFTVSFHIIFPAITIGLASYLVVLEGLWLKTR
FT                   NPVWRSLYQFWLKIFAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTA
FT                   FFLEAGFLGVMLFGWNKVGPGLHFLSTCMVALGTLMSTFWILASNSWMHTPQGFEIHNG
FT                   QVVPVDWFAVIFNPSFPYRLLHMSVAAFLSSAMFVGASAAWHLLKGNDTPAIRRMFSMA
FT                   LWMAVVVAPVQALIGDMHGLNTLKHQPVKIAAIEGHWENTPGEPTPLTLVGWPDMEAER
FT                   TRYALEIPALGSLILTHSLDKQVPALKDYPKEDRPNPTVVFWSFRLMVGMGVLMIFLGL
FT                   ASLWLRYRRRLYHSRPFMHFALWMGPSGLIAILAGWVTTEVGRQPWVVYGLLRTRDAVS
FT                   AHSTLQMSISLLAFFVVYSLVFGVGYIYMIRLIQKGPQPAETPTAETDGRPARPISAVG
FT                   ESLEQEKRE"
FT   misc_feature    149363..150679
FT                   /note="Pfam match to entry PF01654 Bac_Ubq_Cox, Bacterial
FT                   Cytochrome Ubiquinol Oxidase, score 770.80, E-value
FT                   1.8e-229"
FT   CDS             150742..151752
FT                   /transl_table=11
FT                   /gene="STY0393"
FT                   /product="probable terminal oxidase subunit II"
FT                   /note="Similar to Pseudomonas aeruginosa cyanide
FT                   insensitive terminal oxidase cioB TR:O07441 (EMBL:Y10528)
FT                   (335 aa) fasta scores: E(): 0, 65.8% id in 336 aa, and to
FT                   Bacillus subtilis cytochrome d ubiquinol oxidase subunit ii
FT                   cydB SW:CYDB_BACSU (P94365) (338 aa) fasta scores: E():
FT                   1.3e-23, 27.2% id in 334 aa"
FT                   /db_xref="GOA:Q8Z911"
FT                   /db_xref="InterPro:IPR003317"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z911"
FT                   /protein_id="CAD08816.1"
FT                   /translation="MTIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRDV
FT                   MVNSVAPVWDGNETWLVLGGAGLFGAFPLAYAVITDALTIPLVVMLLGLIFRGVAFEFR
FT                   FKATESHRAFWDKSFIVGSILATFAQGVVVSAVVSGFQVEGRTFSGSQLDWLTPFNLFC
FT                   GVGLVVTYALLGATWLIMKSEDPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHDDIAE
FT                   RWFTLPNLYYFLPVPVLVLAFSVWLWRSVKKPQSHARPFILTLGLIFLGFSGLGISIWP
FT                   NIIPPDISLYAAAAPSQSQSFMLVGALIIIPIILAYTFWSYYVFRGKVRHGEGYH"
FT   CDS             151769..151993
FT                   /transl_table=11
FT                   /gene="STY0394"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z910"
FT                   /protein_id="CAD08817.1"
FT                   /translation="MVAASRMDGRDMVRQRASAGGRRNVVQTAHDLRRISLLTDTPGRA
FT                   FVSRESAFLSTDRRLSITFARLISPLNSG"
FT   CDS             152089..153093
FT                   /transl_table=11
FT                   /gene="STY0395"
FT                   /product="AraC-family transcriptional regulator"
FT                   /note="Similar to Salmonella typhimurium putative
FT                   transcriptional activator in foxa 5'region TR:O69047
FT                   (EMBL:AF060876) (325 aa) fasta scores: E(): 0, 98.1% id in
FT                   312 aa, and to Bordetella pertussis AlcR (regulator of
FT                   alcaligin siderophore biosynthesis and transport) alcR
FT                   TR:O52066 (EMBL:AF018255) (324 aa) fasta scores: E():
FT                   9.5e-32, 35.8% id in 318 aa, and to Pseudomonas aeruginosa
FT                   regulatory protein (activator of pyochelin and
FT                   ferripyochelin receptor synthesis) PchR pchR SW:PCHR_PSEAE
FT                   (P40883) (296 aa) fasta scores: E(): 1.1e-12, 28.8% id in
FT                   302 aa"
FT                   /db_xref="GOA:Q8Z909"
FT                   /db_xref="InterPro:IPR000005"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="InterPro:IPR018060"
FT                   /db_xref="InterPro:IPR018062"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z909"
FT                   /protein_id="CAD08818.1"
FT                   /translation="MSPISCHSSAAPAMKKIFSVSDFIAFGERYGIDYRFPALPQYTQS
FT                   SPVLHGDIEEIALPGGICITRSDVHVLQPYETTSRHSSPLYMLVVLEGNVALAVNEQTF
FT                   LLSAGMAFCSQLSEQQTIRAHHGADSKLRTLSLGMYPDGGWRERLPVSLADEWERSAAS
FT                   ARVWQVPEFLLSGLRYAQQPGPHAASRQLMLEGIMLQLLGYALNLCQPATQKRGLPVTG
FT                   EYQRLELIRRLLEQTPEKAYTLNELARRAAMSPSSLRCKFRHAYGCTVFDYLRDCRLAR
FT                   ARRYLMEGYSVQQAAWMSGYQHATNFATAFRRRYGCSPGELRDASLTASRHCA"
FT   misc_feature    152809..153066
FT                   /note="Pfam match to entry PF00165 HTH_AraC, Bacterial
FT                   regulatory helix-turn-helix proteins, araC family, score
FT                   68.80, E-value 1.2e-16"
FT   misc_feature    152920..153045
FT                   /note="PS00041 Bacterial regulatory proteins, araC family
FT                   signature"
FT   CDS             153257..155347
FT                   /transl_table=11
FT                   /gene="STY0396"
FT                   /gene_synonym="foxA"
FT                   /product="ferrioxamine B receptor precursor"
FT                   /note="Similar to Salmonella typhimurium ferrioxamine b
FT                   receptor precursor SW:FOXA_SALTY () (374 aa) fasta scores:
FT                   E(): 0, 97.8% id in 361 aa, and to Yersinia enterocolitica
FT                   ferrioxamine receptor precursor foxA SW:FOXA_YEREN (Q01674)
FT                   (710 aa) fasta scores: E(): 0, 40.9% id in 704 aa"
FT                   /note="Paralogue of E. coli fhuA (FHUA_ECOLI); Fasta hit to
FT                   FHUA_ECOLI (747 aa), 36% identity in 738 aa overlap"
FT                   /db_xref="GOA:Q8Z908"
FT                   /db_xref="HSSP:1BY5"
FT                   /db_xref="InterPro:IPR000531"
FT                   /db_xref="InterPro:IPR010105"
FT                   /db_xref="InterPro:IPR012910"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z908"
FT                   /protein_id="CAD08819.1"
FT                   /translation="MFATTRMALLIGGAIGGATFPLFAQETTKNDTVIVTSPVQSGATR
FT                   LATPDIETPQSVSIITRQQFEEQGATSVRQAVSYTPGVYSNQIGASNRFDYIVLRGFSD
FT                   GSLDNVYLDGLKMMGDTNSHSSLVVDPWFLEDIEVVRGPASVLYGRSSPGGIVSLTSRK
FT                   PAFDAGGEVKLFAGNNNQRGAAFDVTGPLDDNERVAARLSGMTRYADSQFTPLKEERYA
FT                   LMPSLTWRITDRTRLDLMAYLHRDPQGGSHSGLPYQGTVVPYNGGKISNTFFEGEDDYD
FT                   KYDRRENMVGYNIEHLFDNGWSVRQKLRYLHTKVTLNQVYAAGWLNETALNRGYSGSGE
FT                   KMSAIALDNQLDGSVDTGAINHRLLVGIDYQDRSNHTTGYYGAFPPIDAFNPVYGAQPD
FT                   YITLYSREKHKLRQTGYYLQDQMSWDRWRFTLGGRYDRVSVSNIDKLHDSRSDLDKNNV
FT                   STRAALLYLFDNGVAPYLSYSTAFTSTSFADENGNVLEPMKGKQWEAGVKYEPLGGNSQ
FT                   FSAAVYRINQTNIATKEEPTDPYRSIGEIESKGVELEAISHLSDSVRLQAAYTYTDIRY
FT                   KKSSPQEQGKRAVYAPRNQASAWLSYDVKSGLLEWLTLGSGIRYVNGVTSDRLNTHTLP
FT                   SYTLVDMVVGYDLSSIGLNGLSAQLNVNNLTDKRYVAACNSLSYCYFGAERSIVGSVSW
FT                   AF"
FT   misc_feature    155012..155344
FT                   /note="Pfam match to entry PF00593 TonB_boxC, TonB
FT                   dependent receptor C-terminal region, score 94.30, E-value
FT                   7.3e-25"
FT   CDS             complement(155388..156020)
FT                   /transl_table=11
FT                   /gene="STY0397"
FT                   /product="RhtC-like transporter"
FT                   /note="Similar to Escherichia coli hypothetical 24.8 kDa
FT                   protein in bett-prpr intergenic region yahN SW:YAHN_ECOLI
FT                   (P75693; P71307) (223 aa) fasta scores: E(): 0, 86.2% id in
FT                   210 aa, and to Escherichia coli threonine efflux protein
FT                   rhtC SW:RHTC_ECOLI (P27846) (206 aa) fasta scores: E():
FT                   7.1e-16, 28.3% id in 198 aa"
FT                   /note="Orthologue of E. coli YAHN_ECOLI; Fasta hit to
FT                   YAHN_ECOLI (223 aa), 86% identity in 210 aa overlap"
FT                   /db_xref="GOA:Q8Z907"
FT                   /db_xref="InterPro:IPR001123"
FT                   /db_xref="InterPro:IPR004778"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z907"
FT                   /protein_id="CAD08820.1"
FT                   /translation="MEPFHAVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITGL
FT                   GVATGDAFYSGLGLFGLATLITQCEAVFSLIKIVGGAYLLWFAWNSIRHQATPQMSTLQ
FT                   TPIAAPWTIFFRRGLMTDLSNPQTVLFFISIFSVTLSAETPTWARLMAWAGIVLSSVIW
FT                   RIFLSQAFSLPAVRRAYGRIQRIASRVIGAIIGMFALRLLYEGMTHR"
FT   misc_feature    complement(155493..155813)
FT                   /note="Pfam match to entry PF01810 LysE, LysE type
FT                   translocator, score 122.90, E-value 6.1e-33"
FT   CDS             156252..156527
FT                   /transl_table=11
FT                   /gene="STY0398"
FT                   /product="probable secreted protein"
FT                   /note="Fasta hit to YHCN_ECOLI (87 aa), 35% identity in 85
FT                   aa overlap"
FT                   /note="Fasta hit to YBIJ_ECOLI (86 aa), 40% identity in 91
FT                   aa overlap"
FT                   /note="Orthologue of E. coli YAHO_ECOLI; Fasta hit to
FT                   YAHO_ECOLI (91 aa), 73% identity in 91 aa overlap. Contains
FT                   probable N-terminal signal sequence"
FT                   /db_xref="InterPro:IPR010854"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XF33"
FT                   /protein_id="CAD08821.1"
FT                   /translation="MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTIST
FT                   TGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK"
FT   CDS             complement(156663..158288)
FT                   /transl_table=11
FT                   /gene="prpR"
FT                   /gene_synonym="STY0399"
FT                   /product="propionate catabolism operon regulatory protein"
FT                   /note="Similar to Salmonella typhimurium propionate
FT                   catabolism operon regulatory protein. propionate catabolism
FT                   operon regulatory protein SW:PRPR_SALTY () (541 aa) fasta
FT                   scores: E(): 0, 98.9% id in 541 aa, and to Escherichia coli
FT                   propionate catabolism operon regulatory protein prpR
FT                   SW:PRPR_ECOLI (P77743) (528 aa) fasta scores: E(): 0, 79.8%
FT                   id in 530 aa"
FT                   /note="Fasta hit to YGAA_ECOLI (529 aa), 33% identity in
FT                   509 aa overlap"
FT                   /note="Orthologue of E. coli PRPR_ECOLI; Fasta hit to
FT                   PRPR_ECOLI (528 aa), 80% identity in 530 aa overlap"
FT                   /db_xref="GOA:Q8Z906"
FT                   /db_xref="InterPro:IPR002078"
FT                   /db_xref="InterPro:IPR002197"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR010524"
FT                   /db_xref="InterPro:IPR012704"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z906"
FT                   /protein_id="CAD08822.1"
FT                   /translation="MTTAHSAPRDNSDKPVIWTVSVTRLFELFRDISLEFDHLATITPI
FT                   QLGFEKAVTYIRKKLATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAKAG
FT                   KLTSSIGIVTYQETIPTLLAFQKTFHLCLEQRSYVTEEDARGQINELKANGIEAVVGAG
FT                   LITDLAEEAGMTAIFIYSAATVRQAFHDALDMTRLTRRQRVDYPSGKGLQTRYELGDIR
FT                   GQSPQMEQLRQTITLYARSRAAVLIQGETGTGKELAAQAIHQTFFHRQPHRQNKPSPPF
FT                   VAVNCGAITESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQT
FT                   RLLRVLEEKAVTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLSILRLTLP
FT                   PLRERQADILPLAESFLKQSLAAMEIPFTESIRHGLTQCQPLLLAWGWPGNIRELRNMM
FT                   ERLALFLSVDPAPTLDRQFMRQLLPELMVNTAELTPSTVDAHTLQDVLARFKGDKTAAA
FT                   RYLGISRTTLWRRLKAGAKDQSGN"
FT   misc_feature    complement(156894..157628)
FT                   /note="Pfam match to entry PF00158 sigma54, Sigma-54
FT                   transcription factors, score 387.30, E-value 1.5e-112"
FT   misc_feature    complement(156921..156950)
FT                   /note="PS00688 Sigma-54 interaction domain C-terminal part
FT                   signature"
FT   misc_feature    complement(157296..157343)
FT                   /note="PS00676 Sigma-54 interaction domain ATP-binding
FT                   region B signature"
FT   CDS             158554..159441
FT                   /transl_table=11
FT                   /gene="prpB"
FT                   /gene_synonym="STY0400"
FT                   /product="putative carboxyvinyl-carboxyphosphonate
FT                   phosphorylmutase"
FT                   /EC_number="2.7.8.23"
FT                   /note="Similar to Salmonella typhimurium putative
FT                   carboxyvinyl-carboxyphosphonate phosphorylmutase
FT                   SW:CPPM_SALTY () (295 aa) fasta scores: E(): 0, 99.7% id in
FT                   295 aa, and to Escherichia coli putative
FT                   carboxyvinyl-carboxyphosphonate phosphorylmutase prpB
FT                   SW:CPPM_ECOLI (P77541) (296 aa) fasta scores: E(): 0, 91.7%
FT                   id in 290 aa"
FT                   /note="Orthologue of E. coli CPPM_ECOLI; Fasta hit to
FT                   CPPM_ECOLI (296 aa), 92% identity in 290 aa overlap"
FT                   /db_xref="GOA:Q8Z905"
FT                   /db_xref="HSSP:1UJQ"
FT                   /db_xref="InterPro:IPR000918"
FT                   /db_xref="InterPro:IPR012695"
FT                   /db_xref="InterPro:IPR015813"
FT                   /db_xref="InterPro:IPR018523"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z905"
FT                   /protein_id="CAD08823.1"
FT                   /translation="MSLHSPGQAFRAALAKENPLQIVGAINANHALLAQRAGYQAIYLS
FT                   GGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCPLPLLVDADIGFGSSAFNVARTVKSI
FT                   AKAGAAALHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDARTDPNFVIMARTDALA
FT                   VEGLEAALDRAQAYVDAGADMLFPEAITELSMYRQFADVAQVPILANITEFGATPLFTT
FT                   DELRSAHVAMALYPLSAFRAMNRAAEKVYTVLRQEGTQKNVIDIMQTRNELYESINYYQ
FT                   FEEKLDALYRNKKS"
FT   misc_feature    158791..159036
FT                   /note="Pfam match to entry PF00463 ICL, Isocitrate lyase,
FT                   score 18.10, E-value 2.1e-07"
FT   CDS             159564..160733
FT                   /transl_table=11
FT                   /gene="prpC"
FT                   /gene_synonym="STY0401"
FT                   /product="methylcitrate synthase"
FT                   /EC_number="4.1.3.-"
FT                   /note="Similar to Salmonella typhimurium methylcitrate
FT                   synthase SW:CISZ_SALTY () (389 aa) fasta scores: E(): 0,
FT                   98.7% id in 389 aa, and to Escherichia coli methylcitrate
FT                   synthase prpC SW:CISZ_ECOLI (P31660; P77217) (389 aa) fasta
FT                   scores: E(): 0, 96.1% id in 388 aa"
FT                   /note="Fasta hit to CISY_ECOLI (427 aa), 32% identity in
FT                   369 aa overlap"
FT                   /note="Orthologue of E. coli CISZ_ECOLI; Fasta hit to
FT                   CISZ_ECOLI (389 aa), 96% identity in 388 aa overlap"
FT                   /db_xref="GOA:Q8Z904"
FT                   /db_xref="HSSP:1A59"
FT                   /db_xref="InterPro:IPR002020"
FT                   /db_xref="InterPro:IPR011278"
FT                   /db_xref="InterPro:IPR016141"
FT                   /db_xref="InterPro:IPR016142"
FT                   /db_xref="InterPro:IPR019810"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z904"
FT                   /protein_id="CAD08824.1"
FT                   /translation="MTDTTILQNNTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYR
FT                   GYDILDLAEHCEFEEVAHLLIHGKLPTRDELNAYKSKLKALRGLPANVRTVLEALPAAS
FT                   HPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPE
FT                   TDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDVYSA
FT                   IIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIAD
FT                   PRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMWETKKMFPNLDWFSAVSYNMMGVPTE
FT                   MFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYTGPEDRVFVPIEKRC"
FT   misc_feature    159654..159677
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    159687..160673
FT                   /note="Pfam match to entry PF00285 citrate_synt, Citrate
FT                   synthase, score 340.30, E-value 1.6e-106"
FT   misc_feature    160374..160412
FT                   /note="PS00480 Citrate synthase signature"
FT   CDS             160771..162222
FT                   /transl_table=11
FT                   /gene="prpD"
FT                   /gene_synonym="STY0402"
FT                   /product="PrpD protein"
FT                   /note="Similar to Salmonella typhimurium prpd protein. prpd
FT                   protein SW:PRPD_SALTY () (483 aa) fasta scores: E(): 0,
FT                   98.1% id in 483 aa, and to Escherichia coli PrpD protein
FT                   prpD SW:PRPD_ECOLI (P77243) (483 aa) fasta scores: E(): 0,
FT                   93.8% id in 483 aa"
FT                   /note="Orthologue of E. coli PRPD_ECOLI; Fasta hit to
FT                   PRPD_ECOLI (483 aa), 94% identity in 483 aa overlap"
FT                   /db_xref="GOA:Q8Z903"
FT                   /db_xref="InterPro:IPR005656"
FT                   /db_xref="InterPro:IPR012705"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z903"
FT                   /protein_id="CAD08825.1"
FT                   /translation="MSAHISNVRPDFDREIVDIVDYVMNYEITSKVAYDTAHYCLLDTL
FT                   GCGLEALEYPACKKLLGPIVPGTVVPNGARVPGTQFQLDPVQAAFNISAMIRWLDFNDT
FT                   WLAAEWGHPSDNLGGILATADWLSRNAVAAGKAPLTMKQVLSGMIKAHEIQGCIALENA
FT                   FNRVGLDHVLLVKVASTAVVAEMLGLTRDEILNAVSLAWVDGQSLRTYRHAPNTGTRKS
FT                   WAAGDATSRAVRLALMAKTGEMGYPSALTAKTWGFYDVSFKGETFRFQRPYGSYVMENV
FT                   LFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACLRIIDKKGPLNN
FT                   PADRDHCIQYMVAVPLLFGRLTAADYEDEVAQDKRIDALREKIVCYEDPAFTADYHDPE
FT                   KRAIGNAITVEFTDGSRFGEVVVEYPIGHARRRADGIPKLIEKFKINLARQFLTRQQQR
FT                   ILDVSLDRARLEQMPVNEYLDLYII"
FT   CDS             162263..164149
FT                   /transl_table=11
FT                   /gene="prpE"
FT                   /gene_synonym="STY0403"
FT                   /product="PrpE protein"
FT                   /note="Similar to Salmonella typhimurium prpe protein
FT                   SW:PRPE_SALTY () (640 aa) fasta scores: E(): 0, 98.6% id in
FT                   621 aa, and to Escherichia coli PrpE protein prpE
FT                   SW:PRPE_ECOLI (P77495) (628 aa) fasta scores: E(): 0, 89.5%
FT                   id in 628 aa"
FT                   /note="Fasta hit to ACSA_ECOLI (652 aa), 38% identity in
FT                   638 aa overlap"
FT                   /note="Orthologue of E. coli PRPE_ECOLI; Fasta hit to
FT                   PRPE_ECOLI (628 aa), 90% identity in 628 aa overlap"
FT                   /db_xref="GOA:Q8Z902"
FT                   /db_xref="HSSP:1PG4"
FT                   /db_xref="InterPro:IPR000873"
FT                   /db_xref="InterPro:IPR012694"
FT                   /db_xref="InterPro:IPR020845"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z902"
FT                   /protein_id="CAD08826.1"
FT                   /translation="MSFSEFYQRSINEPEAFWAEQARRIDWRQPFTQTLDHSRPPFARW
FT                   FCGGTTNLCHNAVDRWRDKQPEALALIAVSSETDEERTFTFSQLHDEVNAVAAMLLSLG
FT                   VQRGDRVLVYMPMIAEAQITLLACARIGAIHSVVFGGFASHSVAARIDDARPALIVSAD
FT                   AGARGGKILPYKKLLDDAIAQAQHQPKHVLLVDRGLAKMSWVDGRDLDFSTLRQQYLGA
FT                   SVPVAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGGVFFCAS
FT                   DIGWVVGHSYIVYAPLLAGMATIVYEGLPTYPDCGVWWKIVEKYQVNRMFSAPTAIRVL
FT                   KKFPTAQIRNHDLSSLEALYLAGEPLDEPTASWVTETLGVPVIDNYWQTESGWPIMALA
FT                   RALDDRPSRLGSPGVPMYGYNVQLLNEVTGEPCGINEKGMLVIEGPLPPGCIQTIWGDD
FT                   ARFVKTYWSLFNRQVYATFDWGIRDAEGYYFILGRTDDVINIAGHRLGTREIEESISGY
FT                   PNVAEVAVVGIKDALKGQVAVAFVIPKQSDTLADREAARDEEKAIMALVDNQIGHFGRP
FT                   AHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLQQIRQAIEE"
FT   misc_feature    162515..163837
FT                   /note="Pfam match to entry PF00501 AMP-binding, AMP-binding
FT                   enzyme, score 217.30, E-value 2.3e-61"
FT   misc_feature    162971..163006
FT                   /note="PS00455 Putative AMP-binding domain signature"
FT   CDS             complement(164253..165227)
FT                   /transl_table=11
FT                   /gene="STY0404"
FT                   /gene_synonym="hemB"
FT                   /product="delta-aminolevulinic acid dehydratase"
FT                   /note="Orthologue of E. coli hemB (HEM2_ECOLI); Fasta hit
FT                   to HEM2_ECOLI (323 aa), 94% identity in 323 aa overlap"
FT                   /db_xref="GOA:Q8XGH0"
FT                   /db_xref="HSSP:1I8J"
FT                   /db_xref="InterPro:IPR001731"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XGH0"
FT                   /protein_id="CAD08827.1"
FT                   /translation="MTDLIHRPRRLRKSAALRAMFEETTLSLNDLVLPIFVEEELDDYK
FT                   AIDAMPGVMRIPEKQLAREIERIANAGIRSVMTFGISHHTDDTGSDTWKEDGLVARMSR
FT                   ICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLANLGKQAVIAAAAGADFIA
FT                   PSAAMDGQVQAIRQALDAAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMN
FT                   PMNRREAIRESLLDEAQGADCLMVKPAGAYLDVLREIRERTELPLGAYQVSGEYAMIKF
FT                   AAMAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKNILR"
FT   misc_feature    complement(164286..165179)
FT                   /note="Pfam match to entry PF00490 ALAD,
FT                   Delta-aminolevulinic acid dehydratase, score 720.00,
FT                   E-value 1.1e-212"
FT   misc_feature    complement(164472..164510)
FT                   /note="PS00169 Delta-aminolevulinic acid dehydratase active
FT                   site"
FT   CDS             165740..168625
FT                   /transl_table=11
FT                   /gene="STY0405"
FT                   /product="puative autotransporter/virulence factor"
FT                   /note="Similar to two Escherichia coli proteins interrupted
FT                   by an IS3 insertion: hypothetical 50.3 kDa protein in
FT                   hemb-sbma intergenic region yaiU SW:YAIU_ECOLI (P75700;
FT                   P71312) (467 aa) fasta scores: E(): 0, 86.6% id in 469 aa,
FT                   and hypothetical 52.9 kDa protein in hemb-sbma intergenic
FT                   region precursor yaiT SW:YAIT_ECOLI (P77199) (486 aa) fasta
FT                   scores: E(): 0, 53.6% id in 502 aa. C-terminus is similar
FT                   to C-terminus autotransporter domains of Bordetella
FT                   pertussis putative autotransporter TR:O86044
FT                   (EMBL:AF081494) (759 aa) fasta scores: E(): 8e-21, 24.1% id
FT                   in 734 aa, and to Bordetella pertussis tracheal
FT                   colonization factor precursor tcfa2 TR:O86135
FT                   (EMBL:AJ009785) (647 aa) fasta scores: E(): 6.5e-18, 26.3%
FT                   id in 304 aa, and to Escherichia coli EspC (simlar to
FT                   immunoglobulin A protease-like family of secreted proteins)
FT                   espC TR:P77070 (EMBL:U69128) (1306 aa) fasta scores: E():
FT                   2e-08, 21.3% id in 989 aa, and to Salmonella typhimurium
FT                   ShdA shdA TR:Q9XCJ4 (EMBL:AF140550) (2035 aa) fasta scores:
FT                   E(): 1.8e-07, 21.1% id in 1053 aa"
FT                   /db_xref="GOA:Q8Z901"
FT                   /db_xref="InterPro:IPR003991"
FT                   /db_xref="InterPro:IPR004899"
FT                   /db_xref="InterPro:IPR005546"
FT                   /db_xref="InterPro:IPR006315"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z901"
FT                   /protein_id="CAD08828.1"
FT                   /translation="MHSWKKKLVVSQLALACTLAITSQANATTYDTFGYHDDAATVFGW
FT                   DDTNDHDYLTYGGYVYNTPASDSGYFDTKFTGDTVNGVISTYYLNHDYANDTANTLDVT
FT                   NSTIHGMITSYQMGYGQYVWTNGSDYTTHDWVDDDTFNLNISNSTIDDDFEAFYFTDTY
FT                   LDSDGKTVKTDYDKLVTAGLGTAITLDVESNINITNNSHVAGIALYQNDLGNSTYTTEA
FT                   HQWDNTINVANSTVTSGSWSEDEEQGHFGNSSEPSDYNGNGWNKDDVALAFVDDPYSNY
FT                   RMVNNVTFTDSQLLGDVVLESSWNYNFYSNGRLVDDSTTVYTNGGWADDDQNVDHLTLT
FT                   LNNTKWVGAAVNDSQSMDPVQFYDVDANSLDPDSTNYDAWGRVNSAASFQSGIFDVSLN
FT                   NGSEWDTTKTSVIDTLAVNSGSQVDVANGSNLTADTITLNGGSAMNIGEGGYVDTDHLT
FT                   VDTFSTVTLADDVSSAWSDDALYANTITVTHGGMLDIQTNNTNADSVIDTDTLELTSSN
FT                   VADNNGNVYAGVFNIHSNDYTLNADLVNDRTWDTTQANYGYGVVAMNSDGHLTINGNGD
FT                   INNGDEADASSTTDNVVAATGNYKVRIDNATGAGSVADYKGNELIYVNDINTDATFSAA
FT                   NKADLGAYTYQAKQEGNTVVLEQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNAR
FT                   HGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKVDGNNAKWIVGAAAGFAK
FT                   GDLSDRTGQVDQDSQSAYIYSSARFANNIFVDGNLSYSHFNNDLSANMSDGTYVDGNTS
FT                   SDAWGFGLKLGYDLKLGDAGYVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELG
FT                   VDAGYTFTYSEDQALTPYFKLAYVYDDSNNDADVNGDSIDNGVEGFAVRVGLGTQFSFT
FT                   KNFSAYTDANYLGGGDVDQDWSANVGVKYTW"
FT   CDS             168711..169334
FT                   /transl_table=11
FT                   /gene="STY0406"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli YAIV_ECOLI; Fasta hit to
FT                   YAIV_ECOLI (222 aa), 71% identity in 208 aa overlap"
FT                   /db_xref="InterPro:IPR000595"
FT                   /db_xref="InterPro:IPR018490"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z900"
FT                   /protein_id="CAD08829.1"
FT                   /translation="MLSLNKPLQEFNRLDKCLSKHGTRFEFVNDKEIICSPDESNTHTF
FT                   VILEGVVSLVRGDKVLIGIVQAPFIFGLADGVAKKEAQYKLIAESGCIGYRLSSSQTLA
FT                   IIEQNQLWREAFCWIVWKSQVLELRDKQLIGNNSYDQIRATLMTMIEWDEELRSRIGVM
FT                   NYIHQRTRVSRSVVAEVLAALRKGNYIEMNKGKLISINRLPSEY"
FT   CDS             complement(169379..170536)
FT                   /transl_table=11
FT                   /gene="ampH"
FT                   /gene_synonym="STY0407"
FT                   /product="penicillin-binding protein AmpH"
FT                   /note="Similar to Escherichia coli penicillin-binding
FT                   protein AmpH ampH SW:AMPH_ECOLI (P46127; P75701) (376 aa)
FT                   fasta scores: E(): 0, 92.0% id in 376 aa, and to Nocardia
FT                   lactamdurans penicillin-binding protein 4 pbP SW:PBP4_NOCLA
FT                   (Q06317) (381 aa) fasta scores: E(): 3.9e-06, 22.5% id in
FT                   356 aa, and to Citrobacter freundii beta-lactamase
FT                   precursor ampc or blaC SW:AMPC_CITFR (P05193) (381 aa)
FT                   fasta scores: E(): 2.2e-05, 24.3% id in 378 aa. Contains
FT                   probable N-terminal signal sequence"
FT                   /note="Orthologue of E. coli yaiH (AMPH_ECOLI); Fasta hit
FT                   to AMPH_ECOLI (376 aa), 92% identity in 376 aa overlap"
FT                   /db_xref="InterPro:IPR001466"
FT                   /db_xref="InterPro:IPR012338"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z9"
FT                   /protein_id="CAD08830.1"
FT                   /translation="MKRSLLFTAMLFAASLTSVQAAQPIADPVFASDIVDRYAEHIFYG
FT                   SGATGMALVVIDGNQRVFRSFGDTRPGNNVRPQLDSVIRIASLTKLMTSEMLVKLLDQG
FT                   TVKLNDPLSKYAPPGAHVPTYQGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQ
FT                   RWNWLSTATLKVAPGSQAAYSNLAFDLLADALATASGKPYTQLFEEKITRPLGMKDTTF
FT                   TPSPDQCKRLMVAEKGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHRSHQAD
FT                   RMQTLIYQRAQLKKIIGMDVPGKADALGLGWVYMAPKDGRPGIIQKTGGGGGFITYMAM
FT                   IPQYNIGAFVVVTRSPLTRFTNMSDGINDLVTELSGNKPIAIPAS"
FT   CDS             170872..172092
FT                   /transl_table=11
FT                   /gene="sbmA"
FT                   /gene_synonym="STY0408"
FT                   /product="probable ABC-transporter inner membrane protein
FT                   SbmA"
FT                   /product="SbmA protein"
FT                   /note="Similar to Escherichia coli SbmA protein sbmA
FT                   SW:SBMA_ECOLI (P24212; P75702; P71313) (406 aa) fasta
FT                   scores: E(): 0, 91.6% id in 406 aa, and to Rhizobium
FT                   meliloti bacteroid development protein BacA bacA
FT                   SW:BACA_RHIME (Q08120) (420 aa) fasta scores: E(): 0, 64.1%
FT                   id in 409 aa, and to membrane domains of e.g. Escherichia
FT                   coli hypothetical ABC transporter ATP-binding protein in
FT                   pqql-hipa intergenic region yddA SW:YDDA_ECOLI (P31826;
FT                   P76133; P76876) (561 aa) fasta scores: E(): 1.5e-05, 24.7%
FT                   id in 365 aa"
FT                   /note="Orthologue of E. coli sbmA (SBMA_ECOLI); Fasta hit
FT                   to SBMA_ECOLI (406 aa), 92% identity in 406 aa overlap"
FT                   /db_xref="GOA:Q8Z8Z8"
FT                   /db_xref="InterPro:IPR009248"
FT                   /db_xref="InterPro:IPR011527"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z8"
FT                   /protein_id="CAD08831.1"
FT                   /translation="MFKSFFPKPGPFFMSAFVWALIAVIFWQAGGGDWVARLVGASDEV
FT                   PISAARFWLLDYLIFYAYYLICVGLFATFWFIYSPHRWQYWSILGTSLIIFVTWFLVEV
FT                   GVAVNAWYAPFYDLIQTALNSPHKVTLGQFYHEVGVFLGIALIAVVIGVLNNFFVSHYV
FT                   FRWRTAMNEHYMAHWQYLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIAFLPV
FT                   LVTLSAHVPNLPIVGHIPYGLVIAAIVWSLMGTGLLAVVGIKLSGLEFKNQRVEAAYRK
FT                   ELVYGEDDASRATPPTVRELFSAVRHNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFP
FT                   SIVAGTITLGLMTQITNVFGQVRGSFQYLINSWTTLVELMSIYKRLRSFERQLDGQPVQ
FT                   EVTHSFS"
FT   CDS             172107..173201
FT                   /transl_table=11
FT                   /gene="yaiW"
FT                   /gene_synonym="STY0409"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Escherichia coli hypothetical 40.4 kDa
FT                   protein in sbma-ddla intergenic region yaiW SW:YAIW_ECOLI
FT                   (P77562) (364 aa) fasta scores: E(): 0, 85.1% id in 362 aa,
FT                   and to Chlorobium vibrioforme hypothetical 42.0 kDa protein
FT                   TR:O50315 (EMBL:Z83933) (368 aa) fasta scores: E():
FT                   3.7e-29, 30.6% id in 373 aa"
FT                   /note="Orthologue of E. coli YAIW_ECOLI; Fasta hit to
FT                   YAIW_ECOLI (364 aa), 85% identity in 362 aa overlap"
FT                   /db_xref="InterPro:IPR011673"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z7"
FT                   /protein_id="CAD08832.1"
FT                   /translation="MSAASRLYPLPFLAVAILAGCSSQSGQPVSKGEKPVDVASVVRQK
FT                   MPASVKDREAWAKDIATTFKSQGLAPTVENICSVLAVAQQESGYQADPVVPGLSKIAWQ
FT                   EIDRRAERLHIPLFLVHTALKINSPNGKSYSERLDTVKTEKQLSAIFDDFINMVPMGQT
FT                   LFGSYNPVHTGGPMQVSIAFAEQHAKGYPWNMAGTVRQEVFTRRGGLWFGTYHLLNYPA
FT                   NYSAPVFRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYNSKEPGKTELAVRK
FT                   LAGQLGMSEREIRSQLEKGDNLAFEKTALYKKVYKLAEAKTGKTLAREMLPGIQLESPK
FT                   ITRKLTTAWFAKRVDERRARCMGR"
FT   misc_feature    172137..172169
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   misc_feature    173058..173081
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             complement(173239..173547)
FT                   /transl_table=11
FT                   /gene="STY0410"
FT                   /product="putative membrane protein"
FT                   /note="Orthologue of E. coli YAIY_ECOLI; Fasta hit to
FT                   YAIY_ECOLI (102 aa), 86% identity in 102 aa overlap"
FT                   /db_xref="GOA:Q8XEZ4"
FT                   /db_xref="InterPro:IPR020513"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XEZ4"
FT                   /protein_id="CAD08833.1"
FT                   /translation="MADFTLSKSLFSGKHRETSSTPGNIAYAIFVLFCFWAGAQLLNLL
FT                   VHAPGIYEHLMQVQDTGRPRVEIGLGVGTIFGLVPFLTGCLIFAVIAAFLRWRHRHQ"
FT   CDS             173815..174030
FT                   /transl_table=11
FT                   /gene="STY0411"
FT                   /product="putative membrane protein"
FT                   /note="Similar to C-terminus of Escherichia coli
FT                   hypothetical 13.0 kDa protein in sbma-ddla intergenic
FT                   region yaiZ SW:YAIZ_ECOLI (P77273) (114 aa) fasta scores:
FT                   E(): 2.3e-24, 84.5% id in 71 aa"
FT                   /db_xref="InterPro:IPR020490"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z6"
FT                   /protein_id="CAD08834.1"
FT                   /translation="MRLPVKIRRDWHYYAFSIGLIFILNGVVGLLGFEAKGWQTYGVGL
FT                   VTWIISFWLAGFIIRRREDDEVKDAR"
FT   CDS             complement(174056..175150)
FT                   /transl_table=11
FT                   /gene="STY0412"
FT                   /gene_synonym="ddlA"
FT                   /product="D-alanine:D-alanine ligase A"
FT                   /note="Orthologue of E. coli ddlA (DDLA_ECOLI); Fasta hit
FT                   to DDLA_ECOLI (364 aa), 90% identity in 364 aa overlap"
FT                   /db_xref="GOA:P0A1F1"
FT                   /db_xref="InterPro:IPR000291"
FT                   /db_xref="InterPro:IPR005905"
FT                   /db_xref="InterPro:IPR011095"
FT                   /db_xref="InterPro:IPR011127"
FT                   /db_xref="InterPro:IPR011761"
FT                   /db_xref="InterPro:IPR013816"
FT                   /db_xref="InterPro:IPR013817"
FT                   /db_xref="InterPro:IPR016185"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1F1"
FT                   /protein_id="CAD08835.1"
FT                   /translation="MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDK
FT                   AGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGKHQHQLINAQNGQPLPTVDVIFP
FT                   IVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTR
FT                   TNRHAFSFAEVESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQ
FT                   GIKGREIECAVLGNDNPQASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAQIPSEVNDK
FT                   IRAIAIQAYQTLGCAGMARVDVFLTADNEVVINEINTLPGFTNISMYPKLWQASGLGYT
FT                   DLISRLIELALERHTANNALKTTM"
FT   misc_feature    complement(174107..175141)
FT                   /note="Pfam match to entry PF01820 Dala_Dala_ligas, D-ala
FT                   D-ala ligase, score 668.70, E-value 2.9e-197"
FT   misc_feature    complement(174188..174274)
FT                   /note="PS00844 D-alanine--D-alanine ligase signature 2"
FT   misc_feature    complement(174797..174832)
FT                   /note="PS00843 D-alanine--D-alanine ligase signature 1"
FT   misc_feature    complement(175109..175132)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             175228..175941
FT                   /transl_table=11
FT                   /gene="STY0413"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="InterPro:IPR009683"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z5"
FT                   /protein_id="CAD08836.1"
FT                   /translation="MFMGCENGGRVRGKGFLIIVLLGGIGGLGYRYLPSYYNPFAPLQL
FT                   ADPPGWITTFKLQRLTPSQCRELLTAANQQGLISSQPVADSAGECPLSHVVRVRDFGQV
FT                   KLSSSFLASCPLALRSALFVEQQAKPLTETWMQRRLTRIEHLGSYACRNIYHRPDARRS
FT                   EHASAEALDVSGFQLSDGRKITVLRGWGREETGPWLRAMLNASCHYYGNGLRPDYNAAH
FT                   ANHFHLGMRGYGVCR"
FT   CDS             176110..177309
FT                   /transl_table=11
FT                   /gene="STY0414"
FT                   /product="possible efflux pump"
FT                   /note="Similar to Escherichia coli hypothetical 43.9 kDa
FT                   protein in msyb-htrb intergenic region yceE SW:YCEE_ECOLI
FT                   (P25744) (408 aa) fasta scores: E(): 0, 59.6% id in 396 aa,
FT                   and to Streptococcus pneumoniae multi-drug resistance
FT                   efflux pump pmrA TR:Q9ZEX9 (EMBL:AJ007367) (399 aa) fasta
FT                   scores: E(): 0, 41.4% id in 394 aa, and to Salmonella
FT                   ordonez tetracycline resistance protein, class d tetA
FT                   SW:TCR4_SALOR (P33733) (394 aa) fasta scores: E(): 3.7e-19,
FT                   29.7% id in 357 aa"
FT                   /note="Paralogue of E. coli yceE (YCEE_ECOLI); Fasta hit to
FT                   YCEE_ECOLI (408 aa), 60% identity in 396 aa overlap"
FT                   /db_xref="GOA:Q8Z8Z4"
FT                   /db_xref="InterPro:IPR001958"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="InterPro:IPR016196"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z4"
FT                   /protein_id="CAD08837.1"
FT                   /translation="MESWKVNLISVWFGCFFTGLAISQILPFLPLYISQLGVSSHEALS
FT                   MWSGLTFSITFLISAIVSPMWGSLADRKGRKLMLLRASLGMAIAILLQAFATHVWQLFL
FT                   LRGIMGLTSGYIPNAMALVASQVPRERSGWALSTLSTAQISGVIGGPLMGGFVADHIGL
FT                   RAVFLITAMLLVVSFLVTLFLIKEGVRPVIKKSERLSGKAVFASLPYPALVISLFFTTM
FT                   VIQLCNGSISPILALFIKSMMPDSNNIAFLSGLIASVPGISAPRLGKLGDRIGTERILM
FT                   ATLICAVLLFFAMSWVTTPFQLGLLRFLLGFADGAMLPAVQTLLVKYSSDQITGRIFGY
FT                   NQSFMYLGNVVGPLMGATVSAMAGFRWVFIATAAIVLINIGQLTLALRHRRNAQKAKGQ
FT                   "
FT   misc_feature    176125..177261
FT                   /note="Pfam match to entry PF00083 sugar_tr, Sugar (and
FT                   other) transporter, score -72.70, E-value 0.00029"
FT   CDS             177600..177866
FT                   /transl_table=11
FT                   /gene="STY0415"
FT                   /gene_synonym="yaiB"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yaiB (YAIB_ECOLI); Fasta hit
FT                   to YAIB_ECOLI (86 aa), 85% identity in 86 aa overlap"
FT                   /db_xref="GOA:Q8XG49"
FT                   /db_xref="InterPro:IPR019732"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8XG49"
FT                   /protein_id="CAD08838.1"
FT                   /translation="MVMKNLIAELLLKLAQKEEESKELVAQVEALEIIVTAMLRNMAQN
FT                   EQEMLIRQVEGALEGVKPDASVPDHDTELLRQYVKKLLRHPRH"
FT   CDS             178218..178538
FT                   /transl_table=11
FT                   /gene="STY0417"
FT                   /gene_synonym="psiF"
FT                   /product="phosphate starvation-inducible protein PsiF"
FT                   /note="Orthologue of E. coli psiF (PSIF_ECOLI); Fasta hit
FT                   to PSIF_ECOLI (106 aa), 91% identity in 106 aa overlap"
FT                   /db_xref="InterPro:IPR011690"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XGI9"
FT                   /protein_id="CAD08839.1"
FT                   /translation="MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQAL
FT                   KGDARKTYLSDCLKNSQSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACLKK
FT                   AA"
FT   CDS             178630..179742
FT                   /transl_table=11
FT                   /gene="adrA"
FT                   /gene_synonym="STY0418"
FT                   /gene_synonym="yaiC"
FT                   /product="adrA protein"
FT                   /note="Similar to Salmonella typhimurium adra protein
FT                   TR:CAB77394 (EMBL:AJ271071) (370 aa) fasta scores: E(): 0,
FT                   98.6% id in 370 aa, and to Escherichia coli hypothetical
FT                   41.5 kDa protein in psif-proc intergenic region yaiC
FT                   SW:YAIC_ECOLI (P21830; P77719) (371 aa) fasta scores: E():
FT                   0, 75.2% id in 371 aa"
FT                   /note="Orthologue of E. coli yaiC (YAIC_ECOLI); Fasta hit
FT                   to YAIC_ECOLI (371 aa), 75% identity in 371 aa overlap"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="InterPro:IPR007894"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z3"
FT                   /protein_id="CAD08840.1"
FT                   /translation="MFPKIMNDENFYRKAVEQAVAPPDPSDDRQRSGLRFARRIRLPRA
FT                   VGLGGMLLPVAAVLVSQPVFGGWWLLLVGWSFVWPHLAWQWAAKALDPLRQEIYNLKVD
FT                   AILSGMWIALMGVNMLPAAALFMMMSMNLMGAGGRRLFTVGMGLLLASCLVTLQLTGLP
FT                   VAMRSSSLEVTLSLPVIMLYPLLFAWVSYQTAIKLAEHKRRLQAMSSRDGMTGVYNRRH
FT                   WEILLRNEFDHSRRHHREATLLIIDIDHFKSINDTWGHDAGDEAIIALTRQLQITLRGS
FT                   DIIGRFGGDEFAVIMCGTPADSAITAMSRVHERLNTLRLPGAPQVMLRISVGVAPLTPQ
FT                   IGHYREWLKSADMALYKAKNAGRNRTEVAA"
FT   misc_feature    179233..179724
FT                   /note="Pfam match to entry PF00990 DUF9, Domain of unknown
FT                   function DUF9, score 230.80, E-value 1.9e-65"
FT   CDS             complement(179757..180566)
FT                   /transl_table=11
FT                   /gene="STY0419"
FT                   /gene_synonym="proC"
FT                   /product="pyrroline-5-carboxylate reductase"
FT                   /note="Orthologue of E. coli proC (PROC_ECOLI); Fasta hit
FT                   to PROC_ECOLI (269 aa), 95% identity in 269 aa overlap"
FT                   /db_xref="GOA:Q8Z8Z2"
FT                   /db_xref="InterPro:IPR000304"
FT                   /db_xref="InterPro:IPR004455"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z2"
FT                   /protein_id="CAD08841.1"
FT                   /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAAL
FT                   HDQYGINAAQSAQEVAQVADIVFGAVKPGIMVKVLSEISSSLNKDSLVVSIAAGVTLDQ
FT                   LARALGHDRKIIRAMPNTPSLVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEP
FT                   MIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKIVLETGKHP
FT                   GELKDMVCSPGGTTIEAVRVLEERGFRAAVIEAMTKCMEKSEALSKS"
FT   misc_feature    complement(179814..180560)
FT                   /note="Pfam match to entry PF01089 P5CR, Delta
FT                   1-pyrroline-5-carboxylate reductase, score 452.30, E-value
FT                   4.1e-132"
FT   misc_feature    complement(179835..179903)
FT                   /note="PS00521 Delta 1-pyrroline-5-carboxylate reductase
FT                   signature"
FT   CDS             180706..181161
FT                   /transl_table=11
FT                   /gene="STY0420"
FT                   /gene_synonym="yaiI"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yaiI (YAII_ECOLI); Fasta hit
FT                   to YAII_ECOLI (152 aa), 89% identity in 151 aa overlap"
FT                   /db_xref="InterPro:IPR003791"
FT                   /db_xref="UniProtKB/Swiss-Prot:P67335"
FT                   /protein_id="CAD08842.1"
FT                   /translation="MTIWVDADACPNVIKEILYRAAERMQLPLILVANQALRVPPSRFI
FT                   RTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEVLEKGAAALNPRGERYSDATIRE
FT                   RLTMRDFMDTLRASGVQTGGPNTLSPRDRQHFAAELDKWWLESQRKK"
FT   CDS             181346..181891
FT                   /transl_table=11
FT                   /gene="STY0421"
FT                   /gene_synonym="aroL"
FT                   /product="shikimate kinase II"
FT                   /note="Fasta hit to AROK_ECOLI (172 aa), 33% identity in
FT                   163 aa overlap"
FT                   /note="Orthologue of E. coli aroL (AROL_ECOLI); Fasta hit
FT                   to AROL_ECOLI (174 aa), 74% identity in 168 aa overlap"
FT                   /db_xref="GOA:P63604"
FT                   /db_xref="InterPro:IPR000623"
FT                   /db_xref="UniProtKB/Swiss-Prot:P63604"
FT                   /protein_id="CAD08843.1"
FT                   /translation="MMQPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHVQMSV
FT                   ADIVEKEGWGGFRARETAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPV
FT                   STLVNRLEAEPEADLRPTLTGKPLSEEVREVLEQRDALYRETAHYIIDATKAPAQVVSE
FT                   IIAALPPSTQRLQGDVYT"
FT   misc_feature    181352..181852
FT                   /note="Pfam match to entry PF01202 SKI, Shikimate kinase,
FT                   score 257.10, E-value 2.3e-73"
FT   misc_feature    181370..181393
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    181517..181591
FT                   /note="PS01128 Shikimate kinase signature"
FT   CDS             181918..182109
FT                   /transl_table=11
FT                   /gene="STY0422"
FT                   /gene_synonym="yaiA"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yaiA (YAIA_ECOLI); Fasta hit
FT                   to YAIA_ECOLI (63 aa), 95% identity in 62 aa overlap"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z1"
FT                   /protein_id="CAD08844.1"
FT                   /translation="MPTRPPYPREAYIVTIEKGTPGQTVTWYQLRADHPKPDSLISEHP
FT                   TAEEAMDAKKRYEDPDKS"
FT   CDS             182360..183037
FT                   /transl_table=11
FT                   /gene="STY0423"
FT                   /gene_synonym="aroM"
FT                   /product="AroM protein"
FT                   /note="Orthologue of E. coli aroM (AROM_ECOLI); Fasta hit
FT                   to AROM_ECOLI (225 aa), 77% identity in 225 aa overlap"
FT                   /db_xref="InterPro:IPR010843"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Z0"
FT                   /protein_id="CAD08845.1"
FT                   /translation="MSASLAILTIGVVPMSEVLPLLTEYIDEQHITHHSLLGKMSREDV
FT                   MADYAVEPGDDLLLTLLNDNQIAHVSRQKVERDLQSVVEVLDNQGYDVIILMSTAAIKS
FT                   TAARNSILLEPLRIIPPLVASIVDGHQVGAIVPVAELLAAQEKKWQVLQMPPVYSLANP
FT                   VHGSEQQLIDAGQALLDQGADVIMLDCLGFHQRHRDILQQALDVPVLLSNVLIARLASE
FT                   LLV"
FT   CDS             183108..183392
FT                   /transl_table=11
FT                   /gene="STY0424"
FT                   /gene_synonym="yaiE"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yaiE (YAIE_ECOLI); Fasta hit
FT                   to YAIE_ECOLI (94 aa), 87% identity in 94 aa overlap"
FT                   /db_xref="InterPro:IPR009664"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8Y9"
FT                   /protein_id="CAD08846.1"
FT                   /translation="MLQSNEYFSGKVKSIGFTSSSTGRASVGVMAEGEYTFGTAEPEEM
FT                   TVVSGALKVLLPGTVEWKVYTAGEVFNVPGHSEFHLQVAEPTSYLCRYL"
FT   CDS             complement(183430..184275)
FT                   /transl_table=11
FT                   /gene="rdgC"
FT                   /gene_synonym="STY0425"
FT                   /gene_synonym="yaiD"
FT                   /product="recombination associated protein RdgC"
FT                   /note="Orthologue of E. coli yaiD (RDGC_ECOLI); Fasta hit
FT                   to RDGC_ECOLI (303 aa), 93% identity in 281 aa overlap"
FT                   /db_xref="GOA:P65974"
FT                   /db_xref="InterPro:IPR007476"
FT                   /db_xref="UniProtKB/Swiss-Prot:P65974"
FT                   /protein_id="CAD08847.1"
FT                   /translation="MEKQLASMTFTPCGSQDMAKMGWVPPMGSHSDALTHTANGQIIIC
FT                   ARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAFSRFSQT
FT                   MMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLALENPIELTLTEWVRSGTV
FT                   AQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRIQFVM
FT                   CDDGSIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGEAQR
FT                   "
FT   CDS             184467..185375
FT                   /transl_table=11
FT                   /gene="STY0426"
FT                   /gene_synonym="yajF"
FT                   /product="hypothetical ROK-family protein"
FT                   /note="Similar to Escherichia coli hypothetical 32.5 kDa
FT                   protein in arom-araj intergenic region yajF SW:YAJF_ECOLI
FT                   (P23917; P75705; P71316) (302 aa) fasta scores: E(): 0,
FT                   87.7% id in 300 aa, and to Staphylococcus xylosus
FT                   glucokinase glkA SW:GLK_STAXY (Q56198) (328 aa) fasta
FT                   scores: E(): 3.6e-16, 28.4% id in 320 aa"
FT                   /note="Fasta hit to YCFX_ECOLI (303 aa), 39% identity in
FT                   298 aa overlap"
FT                   /note="Orthologue of E. coli yajF (YAJF_ECOLI); Fasta hit
FT                   to YAJF_ECOLI (302 aa), 88% identity in 300 aa overlap"
FT                   /db_xref="InterPro:IPR000600"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Y7"
FT                   /protein_id="CAD08848.1"
FT                   /translation="MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIAT
FT                   LVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANSTWLNGQPFDSDVSRRLKREVRLAN
FT                   DANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPLPWM
FT                   DDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGKTLKGDEIIRLVDAQDAVAE
FT                   LAISRYELRLAKALSHVVNILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPV
FT                   RKARHGDSSGVRGAAWLWPLA"
FT   misc_feature    184476..185045
FT                   /note="Pfam match to entry PF00480 ROK, ROK family, score
FT                   304.20, E-value 2.3e-89"
FT   misc_feature    184854..184937
FT                   /note="PS01125 ROK family signature"
FT   CDS             complement(185395..186567)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="araJ"
FT                   /gene_synonym="STY0428"
FT                   /product="AraJ protein (pseudogene)"
FT                   /note="Similar to Escherichia coli protein AraJ precursor
FT                   araJ SW:ARAJ_ECOLI (P23910) (394 aa) fasta scores: E(): 0,
FT                   87.1% id in 201 aa, and to Streptomyces coelicolor putative
FT                   transmembrane efflux protein sc1g2.16C TR:Q9RDR3
FT                   (EMBL:AL136500) (413 aa) fasta scores: E(): 9.5e-29, 42.8%
FT                   id in 201 aa, and to Streptomyces violaceus chloramphenicol
FT                   resistance protein cmlV TR:Q56147 (EMBL:U09991) (436 aa)
FT                   fasta scores: E(): 3e-15, 29.3% id in 181 aa. Contains a
FT                   stop codon at aa 202. The sequence has been checked, and is
FT                   believed to be correct"
FT   CDS             complement(186771..189875)
FT                   /transl_table=11
FT                   /gene="STY0429"
FT                   /gene_synonym="sbcC"
FT                   /product="exonuclease SbcC"
FT                   /note="Orthologue of E. coli sbcC (SBCC_ECOLI); Fasta hit
FT                   to SBCC_ECOLI (1048 aa), 70% identity in 1032 aa overlap"
FT                   /db_xref="GOA:Q8Z8Y6"
FT                   /db_xref="InterPro:IPR003395"
FT                   /db_xref="InterPro:IPR004592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Y6"
FT                   /protein_id="CAD08850.1"
FT                   /translation="MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTT
FT                   LLDAICLALYHETPRLNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRARNR
FT                   PDGNLQAPRVELARCSDGKIFADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAAFLN
FT                   AKAKERAELLEELTGTEIYGQISAQVFEKHKSARLELEKLQAQASGVALLADEQLQQLE
FT                   ASLQALTDEEKRLLADQQGQQQHLHWLTRKNELHTELHARQQALYAAQEAREKAQPQLA
FT                   ALTLAQPARQLRPHWERIQEQTRAVERVRQHSDEVNARLQSAYRLRQRIRACAHRQFTQ
FT                   LNATGQRLKTWLAEHDGIRVWRSELAGWRALLTQQSHDRAQLSQWQQQLLSDMRQRDAL
FT                   PPLTLDLTPQALAEARALHTRQRPLRHRLAALQGQILPKQKRQAQLQAAIARHHQEQTQ
FT                   YTQRLADKRLSYKTKAQELADVRTICEQEARIKDLESQRAHLQSGQPCPLCGSTTHPAI
FT                   AAYQALELSANQTRRDALEKEVKTLAEEGAALRGQLDALTQQLQRDESEAQSLLQEEQA
FT                   LTEEWQTLCATLGVQLQPQEDLAGWLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARF
FT                   TAQIAQRQASLTADLAQYTLSLPAPEDEASWLNERADEAKIWQQRQTEFADLQTQIDRL
FT                   APLLETLPQTDTADSDDDVPLDNWRQTHDECVSLQSQLQTLQEQTTQEQQRAAEAIAHF
FT                   DAALKNSPFDSQATFLAALLDEETVTRLEKQQQTLESQLQQAKALSAQSAQALADHQQQ
FT                   PPAGLDPTCTAEQLAQRLAQLAQQLRENTTRQGEIRQQIKQDADNRQRQRALMAEMKQA
FT                   SQQVEDWGYLNALIGSKEGDKFRKFAQGLTLDNLVWLANHQLTRLHGRYLLQRKASDAL
FT                   ELEVVDTWQADAVRDTRTLSGGESFLVSLALALSDLVSHKTRIDSLFLDEGFGTLDSET
FT                   LDAALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKNQWAWL"
FT   misc_feature    complement(186858..186881)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    complement(189744..189767)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             complement(189872..191074)
FT                   /transl_table=11
FT                   /gene="STY0430"
FT                   /gene_synonym="sbcD"
FT                   /product="exonuclease SbcD"
FT                   /note="Orthologue of E. coli sbcD (SBCD_ECOLI); Fasta hit
FT                   to SBCD_ECOLI (400 aa), 84% identity in 400 aa overlap"
FT                   /db_xref="GOA:Q8Z8Y5"
FT                   /db_xref="InterPro:IPR004593"
FT                   /db_xref="InterPro:IPR004843"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Y5"
FT                   /protein_id="CAD08851.1"
FT                   /translation="MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLETAQAHQVDAIIV
FT                   AGDIFDTDSPPSYARELYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDILAFLNTTV
FT                   IASAGYAPRLLHRRDGSPGAVLCPIPFLRPRDIITSQAGLSGSEKQQQLLHAIADYYQQ
FT                   QYQEACLLRGERKLPVIATGHLTTVGASKSDAVRDIYIGTLDAFPAQHFPPADYIALGH
FT                   IHRAQCVGGTEHIRYCGSPIALSFDECGKSKCVHLVTFDQGKWQSTESLAVPVTQLLAV
FT                   LKGDLASITEQLEQWRGVEQSPPVWLDIEITTDDYLHDIQRRIQALTESLPVEVLLVRR
FT                   SREQRERSLANERRETLSELSVEEVFARRLALEALDTPQRERLNQLFSSTLYALNEEHE
FT                   A"
FT   CDS             191289..191978
FT                   /transl_table=11
FT                   /gene="STY0432"
FT                   /gene_synonym="phoB"
FT                   /product="phosphate regulon transcriptional regulatory
FT                   protein PhoB"
FT                   /note="Fasta hit to TORR_ECOLI (230 aa), 34% identity in
FT                   231 aa overlap"
FT                   /note="Fasta hit to BAER_ECOLI (240 aa), 41% identity in
FT                   224 aa overlap"
FT                   /note="Fasta hit to YLCA_ECOLI (227 aa), 34% identity in
FT                   220 aa overlap"
FT                   /note="Fasta hit to YEDW_ECOLI (239 aa), 36% identity in
FT                   223 aa overlap"
FT                   /note="Fasta hit to OMPR_ECOLI (239 aa), 39% identity in
FT                   232 aa overlap"
FT                   /note="Fasta hit to YGIX_ECOLI (219 aa), 34% identity in
FT                   227 aa overlap"
FT                   /note="Fasta hit to ARCA_ECOLI (238 aa), 35% identity in
FT                   230 aa overlap"
FT                   /note="Fasta hit to CPXR_ECOLI (232 aa), 39% identity in
FT                   229 aa overlap"
FT                   /note="Fasta hit to PHOP_ECOLI (223 aa), 33% identity in
FT                   225 aa overlap"
FT                   /note="Fasta hit to BASR_ECOLI (222 aa), 33% identity in
FT                   220 aa overlap"
FT                   /note="Fasta hit to KDPE_ECOLI (225 aa), 35% identity in
FT                   223 aa overlap"
FT                   /note="Fasta hit to CREB_ECOLI (229 aa), 38% identity in
FT                   226 aa overlap"
FT                   /note="Orthologue of E. coli phoB (PHOB_ECOLI); Fasta hit
FT                   to PHOB_ECOLI (229 aa), 96% identity in 229 aa overlap"
FT                   /db_xref="GOA:Q8XFX0"
FT                   /db_xref="HSSP:1B00"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR011879"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFX0"
FT                   /protein_id="CAD08852.1"
FT                   /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNKLNEP
FT                   WPDLILLDWMLPGGSGLQFIKHLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYIT
FT                   KPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPGSHRVMTGDSPLDMGPTEFKLL
FT                   HFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDRMVQTVRGTG
FT                   YRFSTRF"
FT   misc_feature    191295..191636
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 141.30, E-value 1.7e-38"
FT   misc_feature    191739..191954
FT                   /note="Pfam match to entry PF00486 trans_reg_C,
FT                   Transcriptional regulatory protein, C terminal, score
FT                   123.60, E-value 1.1e-35"
FT   CDS             192048..193343
FT                   /transl_table=11
FT                   /gene="STY0433"
FT                   /gene_synonym="phoR"
FT                   /product="phosphate regulon sensor protein PhoR"
FT                   /note="Orthologue of E. coli phoR (PHOR_ECOLI); Fasta hit
FT                   to PHOR_ECOLI (431 aa), 90% identity in 431 aa overlap"
FT                   /db_xref="GOA:Q8Z8Y4"
FT                   /db_xref="HSSP:1BXD"
FT                   /db_xref="InterPro:IPR000014"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR003661"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR009082"
FT                   /db_xref="InterPro:IPR013767"
FT                   /db_xref="InterPro:IPR014310"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Y4"
FT                   /protein_id="CAD08853.1"
FT                   /translation="MLERLSWKRLVLELVLCCIPALILSAFFGYLPWFLLAAVTGLLVW
FT                   HFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGA
FT                   ESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPDDNGQNILNLLRYPEFTQYLKTRDFTR
FT                   PLHLVLNTGRHLEIRVMPYTDKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVL
FT                   QGYLEMMQEQALEGATREKALHTMREQTYRMEGLVKQLLTLSKIEVAPALLLNEKVDVP
FT                   MMLRVVEREAQTLSQQKHTFTFAVDDSLSVLGNEEQLRSAISNLVYNAVNHTPAGTHIT
FT                   VSWRRAAHGAEFCIQDNGPGIAAEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHALN
FT                   HHESRLEIDSSPGKGTRFSFVLPERLIAKNSD"
FT   misc_feature    192339..192533
FT                   /note="Pfam match to entry PF00989 PAS, PAS domain, score
FT                   36.00, E-value 2.3e-08"
FT   misc_feature    192684..193313
FT                   /note="Pfam match to entry PF00512 signal, Histidine
FT                   kinase, score 285.20, E-value 8e-82"
FT   misc_feature    193752..195041
FT                   /note="Pfam match to entry PF00324 aa_permeases, Amino acid
FT                   permease, score -304.20, E-value 0.2"
FT   CDS             193752..195071
FT                   /transl_table=11
FT                   /gene="STY0435"
FT                   /gene_synonym="brnQ"
FT                   /product="branched chain amino acid transport system II
FT                   carrier protein"
FT                   /note="Orthologue of E. coli brnQ (BRNQ_ECOLI); Fasta hit
FT                   to BRNQ_ECOLI (439 aa), 95% identity in 439 aa overlap"
FT                   /db_xref="GOA:P0A1W9"
FT                   /db_xref="InterPro:IPR004685"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1W9"
FT                   /protein_id="CAD08854.1"
FT                   /translation="MTHQLKSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAA
FT                   IGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGLLLATVCYLAVGPLFATPRTAT
FT                   VSFEVGIAPLTGDSAMPLLIYSVVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILS
FT                   VAAIVWPAGPISNALDAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEAR
FT                   LLTRYTVWAGLMAGVGLTLLYLALFRLGSDSATLVDQSANGAAILHAYVQHTFGGAGSF
FT                   LLAALIFIACLVTAVGLTCACAEFFAQYIPLSYRTLVFILGGFSMVVSNLGLSHLIQIS
FT                   IPVLTAIYPPCIALVVLSFTRSWWHNSTRIIAPAMFISLLFGILDGIKASAFGDMLPAW
FT                   SQRLPLAEQGLAWLMPTVVMVILAIIWDRAAGRQVTSSAH"
FT   repeat_region   195116..195840
FT                   /note="IS200"
FT   CDS             195265..195723
FT                   /transl_table=11
FT                   /gene="tnpA"
FT                   /gene_synonym="STY0437"
FT                   /product="transposase for insertion sequence element is200"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi transposase for insertion sequence element is200 tnpA
FT                   SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0,
FT                   100.0% id in 152 aa"
FT                   /db_xref="GOA:P59697"
FT                   /db_xref="InterPro:IPR002686"
FT                   /db_xref="UniProtKB/Swiss-Prot:P59697"
FT                   /protein_id="CAD08855.1"
FT                   /translation="MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLC
FT                   EWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNRE
FT                   FWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK"
FT   misc_feature    195319..195630
FT                   /note="Pfam match to entry PF01797 Transposase_17,
FT                   Transposase IS200 like, score 244.30, E-value 1.7e-69"
FT   CDS             195857..197227
FT                   /transl_table=11
FT                   /gene="STY0438"
FT                   /gene_synonym="proY"
FT                   /product="proline-specific permease ProY"
FT                   /note="Fasta hit to CYCA_ECOLI (470 aa), 42% identity in
FT                   454 aa overlap"
FT                   /note="Fasta hit to PHEP_ECOLI (458 aa), 46% identity in
FT                   447 aa overlap"
FT                   /note="Fasta hit to LYSP_ECOLI (488 aa), 35% identity in
FT                   448 aa overlap"
FT                   /note="Fasta hit to YIFK_ECOLI (461 aa), 45% identity in
FT                   452 aa overlap"
FT                   /note="Fasta hit to GABP_ECOLI (466 aa), 34% identity in
FT                   451 aa overlap"
FT                   /note="Fasta hit to ANSP_ECOLI (499 aa), 38% identity in
FT                   446 aa overlap"
FT                   /note="Fasta hit to MMUP_ECOLI (475 aa), 36% identity in
FT                   457 aa overlap"
FT                   /note="Fasta hit to AROP_ECOLI (457 aa), 44% identity in
FT                   450 aa overlap"
FT                   /note="Orthologue of E. coli PROY_ECOLI; Fasta hit to
FT                   PROY_ECOLI (457 aa), 95% identity in 455 aa overlap"
FT                   /db_xref="GOA:Q8Z8Y3"
FT                   /db_xref="InterPro:IPR002293"
FT                   /db_xref="InterPro:IPR004840"
FT                   /db_xref="InterPro:IPR004841"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Y3"
FT                   /protein_id="CAD08856.1"
FT                   /translation="MESNNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVL
FT                   LAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAI
FT                   ADVTAFGIYMGVWFPAVPHWIWVLSVVLIICAINLMSVKMFGELEFWFSFFKVATIIIM
FT                   IVAGIGIIVWGIGNGGQPTGIHNLWSNGGFFSNGWLGMIMSLQMVMFAYGGIEIIGITA
FT                   GEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITF
FT                   AASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTSRRGIPWVTVLVMTI
FT                   ALLFAVYLNYIMPENVFLVIASLVTFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVP
FT                   GGVVTTIAGLIFLVFIIALIGYHPNTRISLYVGFAWIVLLLIGWIFKRRRDRQLAQA"
FT   misc_feature    195875..197200
FT                   /note="Pfam match to entry PF00324 aa_permeases, Amino acid
FT                   permease, score 557.60, E-value 8.2e-164"
FT   misc_feature    195974..196066
FT                   /note="PS00218 Amino acid permeases signature"
FT   CDS             197389..199206
FT                   /transl_table=11
FT                   /gene="STY0439"
FT                   /gene_synonym="malZ"
FT                   /product="maltodextrin glucosidase"
FT                   /note="Orthologue of E. coli malZ (MALZ_ECOLI); Fasta hit
FT                   to MALZ_ECOLI (605 aa), 83% identity in 604 aa overlap"
FT                   /db_xref="GOA:Q8Z8Y2"
FT                   /db_xref="HSSP:1EA9"
FT                   /db_xref="InterPro:IPR004185"
FT                   /db_xref="InterPro:IPR006047"
FT                   /db_xref="InterPro:IPR006589"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017069"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8Y2"
FT                   /protein_id="CAD08857.1"
FT                   /translation="MLNAWHLPVAPFVKQHNDKLTITLWLSGENPPSRVTLRSEFDNEE
FT                   ISLAMRKQRRQPQPGVTAWRATLNIALGQPRRRYSFKLLWHDRQRWFTPQGFSCFPPAR
FT                   LEQFAVDVPDSGPQWVADQIFYQIFPDRFARSATREADQDRVYYHHAAGQEIVLRDWDD
FT                   PLTPQAGGSTFYGGCLNGICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRHVDPQ
FT                   FGGDRALLRLRRETQAQGMRLVLDGVFNHSGDSHAWFDRHNRSTGGACHHPDSPWRDWY
FT                   SFSPQGVALDWLGYPSLPKLDYQSETLVDEIYRGEDSIVRHWLKAPWNMDGWRLDVVHM
FT                   LGEAGGARHNLQHVAGITRAAKEAQPEAYIVGEHFSDARQWLQADAEDAAMNYRGFTFP
FT                   LWGFLANTDIAYEPQHIDARTCIAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGK
FT                   DAARLPLAVVWLFTWPGVPCIYYGDEVGVDGANDPMCRKPFPWDERKQDGNLLALYQRM
FT                   AKLRQSSLALRRGGCQALYAEGDVVVFVRVYQQQRALVAINRGEACEVALEALPLLNVA
FT                   GWQCKTGSGDIREGRLSLPAISATVWMNR"
FT   misc_feature    197758..199134
FT                   /note="Pfam match to entry PF00128 alpha-amylase, Alpha
FT                   amylase, score 392.50, E-value 4e-114"
FT   CDS             complement(199278..199880)
FT                   /transl_table=11
FT                   /gene="STY0440"
FT                   /product="probable peroxidase"
FT                   /note="Similar to Legionella pneumophila predicted
FT                   alkylhydrogenperoxide reductase tsaA TR:Q48834
FT                   (EMBL:L46863) (201 aa) fasta scores: E(): 0, 65.3% id in
FT                   199 aa, and to Campylobacter jejuni predicted alkyl
FT                   hydroperoxide reductase subunit c ahpC TR:Q9ZI13
FT                   (EMBL:AF044271) (198 aa) fasta scores: E(): 0, 61.3% id in
FT                   199 aa, and to Homo sapiens thioredoxin peroxidase 1 tdpx1
FT                   or nkefB SW:TDX1_HUMAN (P32119; P35701; P31945; Q92763)
FT                   (198 aa) fasta scores: E(): 0, 47.9% id in 194 aa"
FT                   /note="Paralogue of E. coli ahpC (AHPC_ECOLI); Fasta hit to
FT                   AHPC_ECOLI (186 aa), 36% identity in 190 aa overlap"
FT                   /db_xref="GOA:Q8XGE8"
FT                   /db_xref="HSSP:1QQ2"
FT                   /db_xref="InterPro:IPR000866"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="InterPro:IPR012336"
FT                   /db_xref="InterPro:IPR017936"
FT                   /db_xref="InterPro:IPR019479"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XGE8"
FT                   /protein_id="CAD08858.1"
FT                   /translation="MVLVTRQAPDFTAAAVLGSGEIVDKFNFKQHTNGKTTVLFFWPMD
FT                   FTFVCPSELIAFDKRYEEFQKRGVEVVGVSFDSEFVHNAWRNTPVDKGGIGPVKYAMVA
FT                   DVKREIQKAYGIEHPDEGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDALQF
FT                   HEEHGDVCPAQWEKGKEGMNASPDGVAKYLAENISSL"
FT   misc_feature    complement(199413..199871)
FT                   /note="Pfam match to entry PF00578 AhpC-TSA, AhpC/TSA
FT                   family, score 210.50, E-value 2.5e-59"
FT   CDS             complement(200090..200671)
FT                   /transl_table=11
FT                   /gene="STY0441"
FT                   /gene_synonym="yajB"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yajB (YAJB_ECOLI); Fasta hit
FT                   to YAJB_ECOLI (193 aa), 88% identity in 193 aa overlap"
FT                   /db_xref="GOA:Q8XEZ8"
FT                   /db_xref="InterPro:IPR007431"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8XEZ8"
FT                   /protein_id="CAD08859.1"
FT                   /translation="MNFLAHLHLAHLADSSLSGNLLADFVRGNPATHYPPDVVEGIYMH
FT                   RRIDVMTDNLPEVREAREWFRHETRRVAPITLDVMWDHFLSRHWTQISPDFPLQAFVGY
FT                   AHAQVATILPDSPPRFVNLNDYLWSEKWLERYRDMDFIQNVLNGMANRRPRLDALRDSW
FT                   YDLDAHYDALEERFWHFYPRMMAQAARKAL"
FT   CDS             200765..201829
FT                   /transl_table=11
FT                   /gene="STY0442"
FT                   /gene_synonym="queA"
FT                   /product="S-adenosylmethionine:tRNA
FT                   ribosyltransferase-isomerase"
FT                   /note="Orthologue of E. coli queA (QUEA_ECOLI); Fasta hit
FT                   to QUEA_ECOLI (356 aa), 94% identity in 353 aa overlap"
FT                   /db_xref="GOA:Q8Z8Y1"
FT                   /db_xref="InterPro:IPR003699"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8Y1"
FT                   /protein_id="CAD08860.1"
FT                   /translation="MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGALTHGTFTD
FT                   LLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPG
FT                   TELLLGDDESIHATMTARHGALFEVEFNDPRPVLDILNAIGHMPLPPYIDRPDEDADRE
FT                   LYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIED
FT                   HIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQ
FT                   IFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDA
FT                   MFITCNPQAISERP"
FT   CDS             202026..203153
FT                   /transl_table=11
FT                   /gene="STY0443"
FT                   /gene_synonym="tgt"
FT                   /product="queuine tRNA-ribosyltransferase; tRNA-guanine
FT                   transglycosylase"
FT                   /note="Orthologue of E. coli tgt (TGT_ECOLI); Fasta hit to
FT                   TGT_ECOLI (375 aa), 97% identity in 375 aa overlap"
FT                   /db_xref="GOA:Q8Z8Y0"
FT                   /db_xref="InterPro:IPR002616"
FT                   /db_xref="InterPro:IPR004803"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8Y0"
FT                   /protein_id="CAD08861.1"
FT                   /translation="MKFELDTTDGRARRGRLVFDRGVVETPAFMPVGTYGTVKGMTPEE
FT                   VEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKI
FT                   TEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSL
FT                   RWAKRSRDRFDSLGNKNALFGIIQGSVYEDLRDISVKGLVEIGFDGYAVGGLAVGEPKA
FT                   DMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTD
FT                   GVVKIRNAKHKSDISPLDAECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQR
FT                   LMAGLRKAIEEGKLESFVTEFYQRQGRPVPPLNVD"
FT   misc_feature    202398..203114
FT                   /note="Pfam match to entry PF01702 TGT, Queuine
FT                   tRNA-ribosyltransferase, score 573.30, E-value 1.6e-168"
FT   CDS             203176..203508
FT                   /transl_table=11
FT                   /gene="STY0444"
FT                   /gene_synonym="yajC"
FT                   /product="putative membrane protein"
FT                   /note="Orthologue of E. coli yajC (YAJC_ECOLI); Fasta hit
FT                   to YAJC_ECOLI (110 aa), 99% identity in 110 aa overlap"
FT                   /db_xref="InterPro:IPR003849"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFR4"
FT                   /protein_id="CAD08862.1"
FT                   /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKR
FT                   TKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAEAGYIAIALNDTTEVVIKRDFVAAVLPK
FT                   GTMKAL"
FT   CDS             203536..205383
FT                   /transl_table=11
FT                   /gene="STY0445"
FT                   /gene_synonym="secD"
FT                   /product="protein-export membrane protein SecD"
FT                   /note="Orthologue of E. coli secD (SECD_ECOLI); Fasta hit
FT                   to SECD_ECOLI (615 aa), 95% identity in 615 aa overlap"
FT                   /db_xref="GOA:Q8Z8X9"
FT                   /db_xref="InterPro:IPR003335"
FT                   /db_xref="InterPro:IPR005791"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8X9"
FT                   /protein_id="CAD08863.1"
FT                   /translation="MLNRYPLWKYIMLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAA
FT                   SEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDTTDTQLRAREALMSVLGDKYVVALN
FT                   LAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGI
FT                   PYTTVRKENNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQSGNQLRAVMTDARLSEA
FT                   REYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEF
FT                   RLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQDEYNQPQ
FT                   VNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQ
FT                   SRLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACL
FT                   AGLVVSILFMIFFYKKFGLIATSALVANLVLIVGIMSLLPGATLSMPGIAGIVLTLAVA
FT                   VDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITTLIKVIILYAVGTGAIK
FT                   GFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI"
FT   misc_feature    204490..204531
FT                   /note="PS00761 Signal peptidases I signature 3"
FT   CDS             205394..206365
FT                   /transl_table=11
FT                   /gene="STY0446"
FT                   /gene_synonym="secF"
FT                   /product="protein-export membrane protein SecF"
FT                   /note="Orthologue of E. coli secF (SECF_ECOLI); Fasta hit
FT                   to SECF_ECOLI (323 aa), 95% identity in 323 aa overlap"
FT                   /db_xref="GOA:Q8XGX9"
FT                   /db_xref="InterPro:IPR003335"
FT                   /db_xref="InterPro:IPR005665"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XGX9"
FT                   /protein_id="CAD08864.1"
FT                   /translation="MAQEYTVEQLNHGRKVYDFMRWDFWAFGISGLLLIAAIVIMGVRG
FT                   FNWGLDFTGGTVIEITLEKPAEMDVMREALQKAGYEEPQLQNFGSSHDIMVRMPPTEGE
FT                   TGGQVLGSKVVTIINEATNQNAAVKRIEFVGPSVGADLAQTGAMALLVALISILVYVGF
FT                   RFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIR
FT                   ENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLVVILMLYLFGGPVLEGFSLTMLIGV
FT                   SIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
FT   CDS             206512..206877
FT                   /transl_table=11
FT                   /gene="STY0447"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to N-terminus of Mycobacterium tuberculosis
FT                   hypothetical 27.6 kDa protein rv0911 or mtcy21c12.05
FT                   TR:O05903 (EMBL:Z95210) (257 aa) fasta scores: E():
FT                   3.3e-05, 30.8% id in 117 aa, and to N-terminus of
FT                   Streptomyces griseus orfd TR:Q54242 (EMBL:D45246) (270 aa)
FT                   fasta scores: E(): 0.0069, 29.4% id in 119 aa"
FT                   /db_xref="InterPro:IPR004360"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFK5"
FT                   /protein_id="CAD08865.1"
FT                   /translation="MKNLINWFEIPVTDMARAIAFYEQVMQISLRRETMDGADLAVFPY
FT                   AEPGPGGALIKQDDVAPVAQGVVIYLHTADLLASIERVVLAGGKCVLEPMVPGDDIGTI
FT                   ALFIDSEGNRIGLHQPA"
FT   CDS             206903..207595
FT                   /transl_table=11
FT                   /gene="STY0448"
FT                   /product="putative deoR-family transcriptional regulator"
FT                   /note="Similar to predicted deoR-family regulators e.g.
FT                   Streptomyces peucetius putative repressor dnrO TR:Q54822
FT                   (EMBL:L37338) (340 aa) fasta scores: E(): 5.1e-17, 33.2% id
FT                   in 217 aa, and to Deinococcus radiodurans repressor
FT                   protein, putative dr0055 TR:Q9RY95 (EMBL:AE001868) (316 aa)
FT                   fasta scores: E(): 7.7e-16, 33.6% id in 223 aa"
FT                   /db_xref="GOA:Q8XFR2"
FT                   /db_xref="InterPro:IPR001034"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR013196"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFR2"
FT                   /protein_id="CAD08866.1"
FT                   /translation="MTRRADRLFQIVQILRGRRLTTAALLAQRLAVSERTIYRDIRDLS
FT                   LSGVPVEGEAGSGYRLMAGFDLPPLMLTHRESEALMVAIRLLKTWGGDSLSRELESAQE
FT                   KVLAILPEESRRKAEQTRIYAPDLGTSPHSRSAFDLIHQAVSAQQVLALHYRDEAGHLS
FT                   SRDIQPLGLFFWGEHWLLVAWCERREDYRCFRLDRCLQITPLNRRFRETIDRSLRDFLR
FT                   KVEHEKMP"
FT   CDS             207765..208112
FT                   /transl_table=11
FT                   /gene="STY0449"
FT                   /gene_synonym="yajD"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli yajD (YAJD_ECOLI); Fasta hit
FT                   to YAJD_ECOLI (109 aa), 96% identity in 108 aa overlap"
FT                   /db_xref="GOA:P0A1S9"
FT                   /db_xref="InterPro:IPR002711"
FT                   /db_xref="InterPro:IPR003615"
FT                   /db_xref="InterPro:IPR015880"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1S9"
FT                   /protein_id="CAD08867.1"
FT                   /translation="MAIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTVH
FT                   HIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGSTVIAGEDAQKDVGEATYNPF
FT                   ADLKAMMNKKK"
FT   misc_feature    207957..207974
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature"
FT   CDS             complement(208365..208691)
FT                   /transl_table=11
FT                   /gene="STY0450"
FT                   /product="hypothetical protein"
FT                   /note="Similar to Salmonella typhimurium 14,5 kDa protein,
FT                   unknown function TR:Q56142 (EMBL:Z26657) (132 aa) fasta
FT                   scores: E(): 0, 85.9% id in 99 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XF89"
FT                   /protein_id="CAD08868.1"
FT                   /translation="MRRRVAPTSHYFRRCHQPKNRPVAIPTSVGAARSCQIVMLNSVSV
FT                   ILPPLLQWQRFAAILNLSGVKLAPVMLPVNTEQCAGVFSFQRQGHRGSSPRNIAPHRVA
FT                   PAYR"
FT   CDS             complement(208745..209608)
FT                   /transl_table=11
FT                   /gene="STY0451"
FT                   /gene_synonym="tsx"
FT                   /product="nucleoside-specific channel-forming protein tsx
FT                   precursor"
FT                   /note="Orthologue of E. coli tsx (TSX_ECOLI); Fasta hit to
FT                   TSX_ECOLI (294 aa), 81% identity in 295 aa overlap"
FT                   /db_xref="GOA:P0A262"
FT                   /db_xref="InterPro:IPR003055"
FT                   /db_xref="InterPro:IPR018013"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A262"
FT                   /protein_id="CAD08869.1"
FT                   /translation="MKKTLLAVSAALALTSSFTANAAENDQPQYLSDWWHQSVNVVGSY
FT                   HTRFSPKLNNDVYLEYEAFAKKDWFDFYGYIDIPKTFDWGNGNDKGIWSDGSPLFMEIE
FT                   PRFSIDKLTGADLSFGPFKEWYFANNYIYDMGDNKASRQSTWYMGLGTDIDTGLPMGLS
FT                   LNVYAKYQWQNYGASNENEWDGYRFKVKYFVPITDLWGGKLSYIGFTNFDWGSDLGDDP
FT                   NRTSNSIASSHILALNYDHWHYSVVARYFHNGGQWQNGAKLNWGDGDFSAKSTGWGGYL
FT                   VVGYNF"
FT   CDS             complement(209908..210447)
FT                   /transl_table=11
FT                   /gene="STY0452"
FT                   /gene_synonym="yajI"
FT                   /product="putative lipoprotein"
FT                   /note="Orthologue of E. coli yajI (YAJI_ECOLI); Fasta hit
FT                   to YAJI_ECOLI (179 aa), 74% identity in 179 aa overlap"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8X8"
FT                   /protein_id="CAD08870.1"
FT                   /translation="MTRRYLRILLVGSLLSLTACAPQSEVRQMHQSISTLNKEMTQLNQ
FT                   ETVKITQQNKLNADSTRGVYLLPGANTPARLESQIGTLRMTLLEITPVADGAHATLRIQ
FT                   GKSRDPLPAFSATVEYGQIQGTTENYQEVNAQSLLVNAPASLLAPSDVNIPLPLKGITP
FT                   AQLGFIRIHDIQPVNQ"
FT   misc_feature    complement(210388..210420)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             210599..211049
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="ybaD"
FT                   /gene_synonym="STY0453"
FT                   /product="conserved hypothetical protein (pseudogene)"
FT                   /note="Similar to Escherichia coli hypothetical 17.2 kDa
FT                   protein in tsx-ribg intergenic region ybaD SW:YBAD_ECOLI
FT                   (P25538) (149 aa) fasta scores: E(): 0, 94.6% id in 149 aa,
FT                   and to Shigella flexneri hypothetical 17.3 kDa protein
FT                   TR:O51824 (EMBL:AF002857) (149 aa) fasta scores: E(): 0,
FT                   94.0% id in 149 aa. The CDS is interrupted by a frameshift
FT                   after codon 84 and a stop codon (around codon 95). The
FT                   sequence has been checked and is believed to be correct"
FT   CDS             211053..212156
FT                   /transl_table=11
FT                   /gene="STY0455"
FT                   /gene_synonym="ribD"
FT                   /product="riboflavin biosynthesis protein RibD"
FT                   /note="Orthologue of E. coli ribD (RIBD_ECOLI); Fasta hit
FT                   to RIBD_ECOLI (367 aa), 89% identity in 367 aa overlap"
FT                   /db_xref="GOA:Q8Z8X7"
FT                   /db_xref="HSSP:1OX7"
FT                   /db_xref="InterPro:IPR002125"
FT                   /db_xref="InterPro:IPR002734"
FT                   /db_xref="InterPro:IPR004794"
FT                   /db_xref="InterPro:IPR011549"
FT                   /db_xref="InterPro:IPR016192"
FT                   /db_xref="InterPro:IPR016193"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8X7"
FT                   /protein_id="CAD08872.1"
FT                   /translation="MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHR
FT                   AGEPHAEVHALRMAGAKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPN
FT                   PQVAGRGLYRLQQAGIAVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGRTAM
FT                   ASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQE
FT                   NLRQPVRIVIDSQNRVTPAHRIVQQPGETWIARTQEDSHAWPDSVRTISVPAHNGHLDL
FT                   VVLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVYVAPKLLGTQARGLCELPGLE
FT                   KLADAPQFTFSEIRHVGPDVCLHMVSA"
FT   misc_feature    211110..211340
FT                   /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine
FT                   and deoxycytidylate deaminase zinc-binding region, score
FT                   117.30, E-value 2.8e-31"
FT   misc_feature    211200..211316
FT                   /note="PS00903 Cytidine and deoxycytidylate deaminases
FT                   zinc-binding region signature"
FT   misc_feature    211494..212108
FT                   /note="Pfam match to entry PF01872 RibD_C, RibD C-terminal
FT                   domain, score 344.70, E-value 1e-99"
FT   CDS             212245..212715
FT                   /transl_table=11
FT                   /gene="STY0456"
FT                   /gene_synonym="ribH"
FT                   /product="6,7-dimethyl-8-ribityllumazine synthase
FT                   (riboflavin synthase beta chain)"
FT                   /note="Orthologue of E. coli ribH (RISB_ECOLI); Fasta hit
FT                   to RISB_ECOLI (156 aa), 91% identity in 156 aa overlap"
FT                   /db_xref="GOA:P66039"
FT                   /db_xref="InterPro:IPR002180"
FT                   /db_xref="UniProtKB/Swiss-Prot:P66039"
FT                   /protein_id="CAD08873.1"
FT                   /translation="MNIIKANVAAPDARVAITIARFNQFINDSLLDGAVDALTRIGQVK
FT                   DDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGGTAHFEYVAGGASNGLASV
FT                   AQDSGVPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
FT   misc_feature    212272..212706
FT                   /note="Pfam match to entry PF00885 DMRL_synthase,
FT                   6,7-dimethyl-8-ribityllumazine synthase, score 311.70,
FT                   E-value 8.6e-90"
FT   CDS             212736..213155
FT                   /transl_table=11
FT                   /gene="STY0457"
FT                   /gene_synonym="nusB"
FT                   /product="N utilization substance protein B"
FT                   /note="Orthologue of E. coli nusB (NUSB_ECOLI); Fasta hit
FT                   to NUSB_ECOLI (139 aa), 96% identity in 139 aa overlap"
FT                   /db_xref="GOA:Q8Z8X6"
FT                   /db_xref="InterPro:IPR006027"
FT                   /db_xref="InterPro:IPR011605"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8X6"
FT                   /protein_id="CAD08874.1"
FT                   /translation="MKPAARHRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDV
FT                   LYFRELLSGVATNSAYLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRSDVPYKVAI
FT                   NEAIELAKTFGAEDSHKFVNGVLDKAAPVIRPNKK"
FT   misc_feature    212748..213128
FT                   /note="Pfam match to entry PF01029 NusB, NusB family, score
FT                   215.60, E-value 7.2e-61"
FT   CDS             213234..214211
FT                   /transl_table=11
FT                   /gene="STY0458"
FT                   /product="thiamine-monophosphate kinase"
FT                   /note="Orthologue of E. coli THIL_ECOLI; Fasta hit to
FT                   THIL_ECOLI (325 aa), 88% identity in 325 aa overlap"
FT                   /db_xref="GOA:Q8Z8X5"
FT                   /db_xref="InterPro:IPR000728"
FT                   /db_xref="InterPro:IPR006283"
FT                   /db_xref="InterPro:IPR010918"
FT                   /db_xref="InterPro:IPR016188"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8X5"
FT                   /protein_id="CAD08875.1"
FT                   /translation="MACGEFSLIARYFDRVRSSRLDVETGIGDDCALLNIPEKQTLAIS
FT                   TDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPEVDEPWLEAFS
FT                   DSLFALLNYYDMQLIGGDTTRGPLSMTLGIHGYIPAGRALKRSGAKPGDWIYVTGTPGD
FT                   SAAGLAVLQNRLQVSEETDAHYLIQRHLRPTPRILHGQALRDIASAAIDLSDGLISDLG
FT                   HIVKASGCGARVDVDALPKSDAMMRHVDDGQELRWALSGGEDYELCFTVPELNRGALDV
FT                   AIGQLGVPFTCIGQMSADIEGLNFVRDGMPVTFDWKGYDHFATP"
FT   misc_feature    213258..214127
FT                   /note="Pfam match to entry PF00586 AIRS, AIR synthase
FT                   related protein, score 12.90, E-value 1.6e-07"
FT   CDS             214189..214704
FT                   /transl_table=11
FT                   /gene="STY0459"
FT                   /product="phosphatidylglycerophosphatase A"
FT                   /note="Orthologue of E. coli PGPA_ECOLI; Fasta hit to
FT                   PGPA_ECOLI (172 aa), 95% identity in 171 aa overlap"
FT                   /db_xref="GOA:Q8XFK4"
FT                   /db_xref="InterPro:IPR007686"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFK4"
FT                   /protein_id="CAD08876.1"
FT                   /translation="MTILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLAA
FT                   IPFWYLMTFLPWQLYSLVVMFGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMA
FT                   LPTTDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIG
FT                   HHWPLGII"
FT   CDS             complement(214808..215782)
FT                   /transl_table=11
FT                   /gene="STY0460"
FT                   /product="putative oxidoreductase"
FT                   /note="Similar to membrers of the aldo/keto reductase
FT                   family 2 e.g. Escherichia coli hypothetical oxidoreductase
FT                   in pgpA-ispA intergenic region YajO SW:YAJO_ECOLI (P77735)
FT                   (324 aa) fasta scores: E(): 0, 92.9% id in 324 aa, and to
FT                   Arabidopsis thaliana k+ channel protein TR:Q39151
FT                   (EMBL:L40948) (328 aa) fasta scores: E(): 4.8e-31, 35.5% id
FT                   in 332 aa, and to Aspergillus flavus norsolorinic acid
FT                   reductase NorA SW:NORA_ASPFL (Q00049) (388 aa) fasta
FT                   scores: E(): 1.3e-27, 31.5% id in 324 aa"
FT                   /note="Fasta hit to YDJG_ECOLI (326 aa), 33% identity in
FT                   324 aa overlap"
FT                   /note="Fasta hit to Q46851 (346 aa), 37% identity in 330 aa
FT                   overlap"
FT                   /note="Orthologue of E. coli YAJO_ECOLI; Fasta hit to
FT                   YAJO_ECOLI (324 aa), 93% identity in 324 aa overlap"
FT                   /db_xref="GOA:Q8Z8X4"
FT                   /db_xref="HSSP:1GVE"
FT                   /db_xref="InterPro:IPR001395"
FT                   /db_xref="InterPro:IPR020471"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8X4"
FT                   /protein_id="CAD08877.1"
FT                   /translation="MQYNTLGNTDLRVSRLCLGCMTFGEPSRGNHAWTLPEESSRPIIK
FT                   RALEGGINFFDTANSYSDGSSEEIVGRALRDFARRDEVVVATKVFHRVGDLPEGLSRAQ
FT                   ILRSIDDSLTRLGMEYVDILQIHRWDYTTPIEETLEALNDVVKAGKARYIGASSMHASQ
FT                   FAQALALQKQHGWAPFVTMQDHYNLIYREEEREMLPLCWQEGVAVIPWSPLARGRLTRP
FT                   WGETTARLASDDVGKNLYDESDKNDAQIAERLAGVSEALGATRAQVALAWLLSKRGVAA
FT                   PIIGASREEQLDELLNAVDLTLKPEQIAELETPYKQHPVVGFK"
FT   CDS             complement(215839..217701)
FT                   /transl_table=11
FT                   /gene="dxs"
FT                   /gene_synonym="STY0461"
FT                   /product="1-deoxyxylulose-5-phosphate synthase"
FT                   /note="Orthologue of E. coli DXS_ECOLI; Fasta hit to
FT                   DXS_ECOLI (619 aa), 96% identity in 619 aa overlap"
FT                   /db_xref="GOA:Q8Z8X3"
FT                   /db_xref="InterPro:IPR005474"
FT                   /db_xref="InterPro:IPR005475"
FT                   /db_xref="InterPro:IPR005476"
FT                   /db_xref="InterPro:IPR005477"
FT                   /db_xref="InterPro:IPR009014"
FT                   /db_xref="InterPro:IPR015941"
FT                   /db_xref="InterPro:IPR020826"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8X3"
FT                   /protein_id="CAD08878.1"
FT                   /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSR
FT                   SSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGL
FT                   HPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKDRRTVCVIGDGAITAGMAFEA
FT                   MNHAGDIRPDMLVILNDNEMSISENVGALNNHLARLLSGKLYSSLREGGKKVFSGVPPI
FT                   KELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVMGLISTLKNMRDLKGPQFLHIM
FT                   TKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPGYSKIFGDWLCETAAKDSKLM
FT                   AITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRA
FT                   YDQVIHDVAIQKLPVMFAIDRAGIVGADGQTHQGAFDLSYLRCIPDMVIMTPSDENECR
FT                   QMLFTGYHYNDGPTAVRYPRGNAQGVALTPLEKLPIGKGLVKRHGEKLAILNFGTLMPE
FT                   AAKVAEALNATLVDMRFVKPLDDTLILEMAAQHDALVTLEENAIMGGAGSGVNEVLMAH
FT                   RKPVPVLNIGLPDFFIPQGTQEEARAELGLDAAGIEAKIKAWLA"
FT   misc_feature    complement(216379..216429)
FT                   /note="PS00802 Transketolase signature 2"
FT   misc_feature    complement(217537..217596)
FT                   /note="PS00801 Transketolase signature 1"
FT   CDS             complement(217725..218624)
FT                   /transl_table=11
FT                   /gene="STY0462"
FT                   /gene_synonym="ispA"
FT                   /product="geranyltranstransferase"
FT                   /note="Orthologue of E. coli ispA (ISPA_ECOLI); Fasta hit
FT                   to ISPA_ECOLI (299 aa), 90% identity in 299 aa overlap"
FT                   /db_xref="GOA:Q8Z8X2"
FT                   /db_xref="InterPro:IPR000092"
FT                   /db_xref="InterPro:IPR008949"
FT                   /db_xref="InterPro:IPR017446"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8X2"
FT                   /protein_id="CAD08879.1"
FT                   /translation="MDFTQQLQACVTQANQALSRFIAPLPFQNTPVVEAMQYGALLGGK
FT                   RLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIK
FT                   FGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLA
FT                   AEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQ
FT                   DDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARNKARDLIEDARQSLHQLAAQS
FT                   LDTSALEALANYIIQRDK"
FT   misc_feature    complement(217740..218531)
FT                   /note="Pfam match to entry PF00348 polyprenyl_synt,
FT                   Polyprenyl synthetases, score 443.90, E-value 1.4e-129"
FT   misc_feature    complement(217881..217904)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    complement(217944..217982)
FT                   /note="PS00444 Polyprenyl synthetases signature 2"
FT   misc_feature    complement(218334..218384)
FT                   /note="PS00723 Polyprenyl synthetases signature 1"
FT   CDS             complement(218625..218867)
FT                   /transl_table=11
FT                   /gene="STY0463"
FT                   /gene_synonym="xseB"
FT                   /product="exodeoxyribonuclease small subunit"
FT                   /note="Orthologue of E. coli xseB (EX7S_ECOLI); Fasta hit
FT                   to EX7S_ECOLI (79 aa), 90% identity in 79 aa overlap"
FT                   /db_xref="GOA:P67459"
FT                   /db_xref="InterPro:IPR003761"
FT                   /db_xref="UniProtKB/Swiss-Prot:P67459"
FT                   /protein_id="CAD08880.1"
FT                   /translation="MPKKNEAPASFETALSELEHIVTRLESGDLPLEDALNEFERGVQL
FT                   ARQGQAKLQQAEQRVQILLSDNEEASPEPFIADNE"
FT   CDS             219077..220525
FT                   /transl_table=11
FT                   /gene="STY0464"
FT                   /product="thiamine biosynthesis protein ThiI"
FT                   /note="Orthologue of E. coli THII_ECOLI; Fasta hit to
FT                   THII_ECOLI (482 aa), 96% identity in 482 aa overlap"
FT                   /db_xref="GOA:Q8Z8X1"
FT                   /db_xref="InterPro:IPR001763"
FT                   /db_xref="InterPro:IPR003720"
FT                   /db_xref="InterPro:IPR004114"
FT                   /db_xref="InterPro:IPR020536"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8X1"
FT                   /protein_id="CAD08881.1"
FT                   /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVR
FT                   HWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALAQYREQLEG
FT                   KTFCVRVKRRGKHEFSSIEVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIK
FT                   GRYEGIGGFPIGTQEDVLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQ
FT                   VAHYLWNRFGSSHRVRFVAINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGV
FT                   QALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTM
FT                   PEYCGVISKSPTVKAIKAKIEAEEENFDFSILDKVVEEANNVDIREIAQQTQQEVVEVE
FT                   TVSGFGANDVILDIRSVDEQDDKPLKVEGVDVVSLPFYKLSTKFGDLDQSKTWLLWCER
FT                   GVMSRLQALYLREQGFANVKVYRP"
FT   CDS             complement(220575..221366)
FT                   /transl_table=11
FT                   /gene="phnV"
FT                   /gene_synonym="STY0465"
FT                   /product="probable membrane component of
FT                   2-aminoethylphosphonate transporter"
FT                   /note="Previously sequenced as Salmonella typhimurium phnv
FT                   TR:P96065 (EMBL:U69493) (265 aa) fasta scores: E(): 0,
FT                   98.5% id in 263 aa, and similar to Escherichia coli
FT                   spermidine/putrescine transport system permease protein
FT                   PotC potC SW:POTC_ECOLI (P23859) (264 aa) fasta scores:
FT                   E(): 3.3e-14, 24.8% id in 254 aa"
FT                   /note="Paralogue of E. coli modB (MODB_ECOLI); Fasta hit to
FT                   MODB_ECOLI (229 aa), 31% identity in 221 aa overlap"
FT                   /db_xref="GOA:Q8Z8X0"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="InterPro:IPR017661"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8X0"
FT                   /protein_id="CAD08882.1"
FT                   /translation="MLIWSPKGRAAAGVVASVLFIVFFFLPLAVILMSSLSQRWNGILP
FT                   SGFTLNHFVNALHGAAWDALLASLTIGFCASLFALLCGVWAALALRQYGVKTQKWLSMV
FT                   FYLPSAIPSVSVGLGILVAFSQGPLQMNGTLWIVLTAHFVLISAFTFSNVSTGLARISA
FT                   DIENVASSLGASPWYRLRHVTLPLLMPWMVSELALSLSLSMGELGATVMIYPPGWTTLP
FT                   VAIFSLTDRGNIADGAALTIVLVAITLLLMMKLERIAKRLG"
FT   misc_feature    complement(220677..220898)
FT                   /note="Pfam match to entry PF00528 BPD_transp,
FT                   Binding-protein-dependent transport systems inner membrane
FT                   component, score 45.40, E-value 1.2e-09"
FT   CDS             complement(221360..222229)
FT                   /transl_table=11
FT                   /gene="phnU"
FT                   /gene_synonym="STY0466"
FT                   /product="probable membrane component of
FT                   2-aminoethylphosphonate transporter"
FT                   /note="Previously sequenced as Salmonella typhimurium phnU
FT                   TR:P96064 (EMBL:U69493) (286 aa) fasta scores: E(): 0,
FT                   99.0% id in 286 aa, and similar to Chlorella vulgaris
FT                   probable sulphate transport system permease protein CysT
FT                   SW:CYST_CHLVU (P56343) (266 aa) fasta scores: E(): 5.5e-15,
FT                   33.0% id in 233 aa"
FT                   /db_xref="GOA:Q8Z8W9"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="InterPro:IPR017636"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8W9"
FT                   /protein_id="CAD08883.1"
FT                   /translation="MSLILPLEKPALNLRPLLWLLLPLLALATLFFWPLSLIVEQALRG
FT                   ANGEIGLETFRQVVDSKRFVGALLNTLQIAFFATAGCLLLGSVMSLILVFIPFPGSELI
FT                   GRVVDTFIALPTFLITLAFTFIYGSAGLLNGALMSLFAFELPPVDFLYSMQGVILAEIT
FT                   VFTPLVMRPLMAALRQIDKSQLEAASILGAHPLRVIGQVIFPAALPALMASGSLCLLLT
FT                   TNEFGIVLFIGAKGVNTLPMMVYSKAILESDYTVACMIALINIVLSLGLFSLYRLAASR
FT                   TGVRSQPC"
FT   misc_feature    complement(221483..221704)
FT                   /note="Pfam match to entry PF00528 BPD_transp,
FT                   Binding-protein-dependent transport systems inner membrane
FT                   component, score 49.30, E-value 8.5e-11"
FT   misc_feature    complement(221615..221701)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp sign."
FT   CDS             complement(222232..223341)
FT                   /transl_table=11
FT                   /gene="phnT"
FT                   /gene_synonym="STY0467"
FT                   /product="probable ATP-binding component of
FT                   2-aminoethylphosphonate transporter"
FT                   /note="Previously sequenced as Salmonella typhimurium phnt
FT                   TR:P96063 (EMBL:U69493) (369 aa) fasta scores: E(): 0,
FT                   98.6% id in 369 aa, and similar to Escherichia coli
FT                   putrescine transport ATP-binding protein PotG potG
FT                   SW:POTG_ECOLI (P31134) (404 aa) fasta scores: E(): 0, 38.8%
FT                   id in 361 aa"
FT                   /note="Fasta hit to AFUC_ECOLI (348 aa), 37% identity in
FT                   334 aa overlap"
FT                   /note="Fasta hit to CYSA_ECOLI (365 aa), 37% identity in
FT                   346 aa overlap"
FT                   /note="Fasta hit to YCJV_ECOLI (322 aa), 40% identity in
FT                   323 aa overlap"
FT                   /note="Fasta hit to YDCT_ECOLI (337 aa), 35% identity in
FT                   353 aa overlap"
FT                   /note="Fasta hit to UGPC_ECOLI (356 aa), 41% identity in
FT                   297 aa overlap"
FT                   /note="Fasta hit to MALK_ECOLI (371 aa), 38% identity in
FT                   333 aa overlap"
FT                   /note="Paralogue of E. coli potG (POTG_ECOLI); Fasta hit to
FT                   POTG_ECOLI (404 aa), 39% identity in 361 aa overlap"
FT                   /db_xref="GOA:Q8Z8W8"
FT                   /db_xref="HSSP:2AWN"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR008995"
FT                   /db_xref="InterPro:IPR013611"
FT                   /db_xref="InterPro:IPR017662"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8W8"
FT                   /protein_id="CAD08884.1"
FT                   /translation="MLMKTTAVHAPASQGTSGIVLDSLRVAYHGNVVLKPLSLTIEPGE
FT                   VLALIGPSGSGKTTVLRAVAGFVQPAGGRILIGDTDVTHLPPYKRGLAMVVQNYALFPH
FT                   LKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSDYATRYPHQLSGGQQQRVAIARAI
FT                   AVRPRVLLLDEPLSALDAQIRHNMVEEIARLHRELPELTILYVTHDQTEALTLADKIGI
FT                   MKDGSLIAHGETRALYHHPPNRFAAEFLGRANILSAIALGITEVPGLVDVSCGGAVIRA
FT                   FSQGSHHGYNKLLCIRPQHLSLTPRSAYSNRFNATLQSVHWQGDLTHLLCDVAGETVRM
FT                   VLTHVNPLPRVGDKLALWFEPDDAVLIEV"
FT   misc_feature    complement(222664..223212)
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 226.10, E-value 5.1e-64"
FT   misc_feature    complement(222853..222897)
FT                   /note="PS00211 ABC transporters family signature"
FT   misc_feature    complement(223168..223191)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             complement(223347..224360)
FT                   /transl_table=11
FT                   /gene="phnS"
FT                   /gene_synonym="STY0468"
FT                   /product="probable periplasmic binding component of
FT                   2-aminoethylphosphonate transporter"
FT                   /note="Previously sequenced as Salmonella typhimurium phns
FT                   TR:P96062 (EMBL:U69493) (337 aa) fasta scores: E(): 0,
FT                   99.1% id in 337 aa, and similar to Escherichia coli
FT                   thiamine-binding periplasmic protein precursor.
FT                   thiamine-binding periplasmic protein precursor
FT                   SW:TBPA_ECOLI () (327 aa) fasta scores: E(): 3.2e-08, 25.0%
FT                   id in 336 aa"
FT                   /db_xref="GOA:Q8Z8W7"
FT                   /db_xref="InterPro:IPR006059"
FT                   /db_xref="InterPro:IPR017637"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8W7"
FT                   /protein_id="CAD08885.1"
FT                   /translation="MKLSRLALLSVFALASAPSWAESVVTVYSIDGLHDGDNSWYQVQF
FT                   DAFTKATGITIRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNTD
FT                   AASAIPDANNLYSPLVKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADG
FT                   TAVMLQAFHSFGSKDASFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQMNLA
FT                   QMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSE
FT                   LSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKVTESE"
FT   CDS             complement(224558..225277)
FT                   /transl_table=11
FT                   /gene="phnR"
FT                   /gene_synonym="STY0469"
FT                   /product="probable regulator of 2-aminoethylphosphonate
FT                   uptake and metabolism operon"
FT                   /note="Previously sequenced as Salmonella typhimurium phnr
FT                   TR:P96061 (EMBL:U69493) (239 aa) fasta scores: E(): 0,
FT                   100.0% id in 239 aa, and to Escherichia coli hypothetical
FT                   transcriptional regulator in glnA-rbn intergenic region
FT                   yihL SW:YIHL_ECOLI (P32133) (236 aa) fasta scores: E():
FT                   4.7e-23, 33.0% id in 224 aa"
FT                   /note="Paralogue of E. coli YIHL_ECOLI; Fasta hit to
FT                   YIHL_ECOLI (236 aa), 33% identity in 225 aa overlap"
FT                   /db_xref="GOA:P96061"
FT                   /db_xref="InterPro:IPR000524"
FT                   /db_xref="InterPro:IPR011663"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR017722"
FT                   /db_xref="UniProtKB/Swiss-Prot:P96061"
FT                   /protein_id="CAD08886.1"
FT                   /translation="MKSIPGDIPQYLLIKAQLQARIQSGALKSGDKLPSERELCAIFNT
FT                   TRITIRESLAQLESSGLIWRADRRGWFVTPERLWLDPTQNTNFHKLCREQGREPKTALL
FT                   SGVLTTVPVEVMEPLQLQPFDQIYLLTRLRYADGRAVCYCENHCLPARVPELLQYDLNG
FT                   SLTEVYESHYNLVYTSMHLSFYPTAMPAQAAQALGVMEGRPALLLRRLNYDQHGRVLDL
FT                   DIEYWRHDSLRIEVDTH"
FT   misc_feature    complement(225059..225238)
FT                   /note="Pfam match to entry PF00392 gntR, Bacterial
FT                   regulatory proteins, gntR family, score 82.90, E-value
FT                   4.5e-24"
FT   misc_feature    complement(225107..225181)
FT                   /note="PS00043 Bacterial regulatory proteins, gntR family
FT                   signature"
FT   CDS             225417..226520
FT                   /transl_table=11
FT                   /gene="phnW"
FT                   /gene_synonym="STY0470"
FT                   /product="2-aminoethylphosphonate:pyruvate
FT                   aminotransferase"
FT                   /note="Previously sequenced as Salmonella typhimurium phnw
FT                   TR:P96060 (EMBL:U69493) (367 aa) fasta scores: E(): 0,
FT                   99.5% id in 367 aa, and similar to Methanobacterium
FT                   thermoformicicum aspartate aminotransferase aspC TR:Q59569
FT                   (EMBL:D28763) (385 aa) fasta scores: E(): 8.7e-21, 25.1% id
FT                   in 363 aa"
FT                   /db_xref="GOA:Q8Z8W6"
FT                   /db_xref="InterPro:IPR000192"
FT                   /db_xref="InterPro:IPR012703"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="InterPro:IPR017688"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8W6"
FT                   /protein_id="CAD08887.1"
FT                   /translation="MTSRNYLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQ
FT                   QLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMG
FT                   IAHHAYDCGEVARPNVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGK
FT                   TYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGRSRSL
FT                   SLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVA
FT                   GMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFR
FT                   IGNIGEVYAADITALLTAIRTAMYWTK"
FT   misc_feature    225444..226481
FT                   /note="Pfam match to entry PF00266 aminotran_5,
FT                   Aminotransferases class-V, score -27.60, E-value 7.7e-06"
FT   CDS             226530..227339
FT                   /transl_table=11
FT                   /gene="phnX"
FT                   /gene_synonym="STY0471"
FT                   /product="phosphonoacetaldehyde phosphonohydrolase"
FT                   /note="Previously sequenced as Salmonella typhimurium phnx
FT                   TR:P96059 (EMBL:U69493) (255 aa) fasta scores: E(): 0,
FT                   97.9% id in 241 aa, and similar to Pseudomonas aeruginosa
FT                   2-phosphonoacetaldehyde hydrolase TR:Q51386 (EMBL:U45309)
FT                   (275 aa) fasta scores: E(): 0, 54.1% id in 266 aa"
FT                   /db_xref="GOA:Q8Z8W5"
FT                   /db_xref="InterPro:IPR005834"
FT                   /db_xref="InterPro:IPR006323"
FT                   /db_xref="InterPro:IPR006402"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8W5"
FT                   /protein_id="CAD08888.1"
FT                   /translation="MNRIHAVILDWAGTTVDFGSFAPTQIFVEAFRQAFDVEITLAEAR
FT                   VPMGLGKWQHIEALGKLPTVDARWQAKFGRAMSAADIDAIYAAFMPLQIAKVVDFSSPI
FT                   AGVIDTIATLRAEGIKIGSCSGYPRAVMERLVPAAAEHGYRPDHWVATDDLVAGGRPGP
FT                   WMALQNVIALGIDAVAHCVKVDDAAPGISEGLNAGMWTVGLAVSGNEFGATWDAYQTMS
FT                   KEDVAVRREHAASKLYAAGAHYVVDSLADLPEVIAHINARLAQGERP"
FT   misc_feature    226539..227150
FT                   /note="Pfam match to entry PF00702 Hydrolase, haloacid
FT                   dehalogenase-like hydrolase, score 19.70, E-value 0.00015"
FT   CDS             complement(227436..228026)
FT                   /transl_table=11
FT                   /gene="STY0472"
FT                   /gene_synonym="thiJ"
FT                   /product="4-methyl-5(b-hydroxyethyl)-thiazole monophosphate
FT                   biosynthesis (ThiJ) protein"
FT                   /note="Orthologue of E. coli thiJ (THIJ_ECOLI); Fasta hit
FT                   to THIJ_ECOLI (196 aa), 95% identity in 196 aa overlap"
FT                   /db_xref="HSSP:1P5F"
FT                   /db_xref="InterPro:IPR002818"
FT                   /db_xref="InterPro:IPR006287"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8W4"
FT                   /protein_id="CAD08889.1"
FT                   /translation="MSAQALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTI
FT                   VCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAA
FT                   ICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWQDKRVVWDARVKLLTSQGPGTAID
FT                   FGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE"
FT   misc_feature    complement(227553..228017)
FT                   /note="Pfam match to entry PF01965 ThiJ, ThiJ/PfpI family,
FT                   score 264.40, E-value 1.5e-75"
FT   CDS             complement(227989..228900)
FT                   /transl_table=11
FT                   /gene="STY0473"
FT                   /gene_synonym="apbA"
FT                   /product="ApbA"
FT                   /product="2-dehydropantoate 2-reductase"
FT                   /note="Orthologue of E. coli apbA (APBA_ECOLI); Fasta hit
FT                   to APBA_ECOLI (303 aa), 86% identity in 303 aa overlap"
FT                   /db_xref="GOA:Q8Z8W3"
FT                   /db_xref="InterPro:IPR003710"
FT                   /db_xref="InterPro:IPR008927"
FT                   /db_xref="InterPro:IPR013328"
FT                   /db_xref="InterPro:IPR013332"
FT                   /db_xref="InterPro:IPR013752"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8W3"
FT                   /protein_id="CAD08890.1"
FT                   /translation="MKITVLGCGALGQLWLSALCKHGHDVQGWLRVPQPYCSVNLIDTD
FT                   GSFFNESLTANDPDFLAKSELLLVTLKAWQVSDAVRTLASTLPVTSPILLIHNGMGTIE
FT                   ELQSIQQPMLMGAITHAARRDGNIIIHVANGTTHIGPAREQDGDYSYLAEILQGVLPDV
FT                   AWHNNIRAEMWRKLAVNCVINPLTALWNCPNGELRHHTDEINAICEEVAAVIEREGYHT
FT                   SADDLCYYVEQVIDSTAENISSMLQDVRAMRHTEIDYITGYLLKRARVHGLAVPENSRL
FT                   FEMVKRKESEYERSGTGMPRPW"
FT   CDS             229008..229517
FT                   /transl_table=11
FT                   /gene="STY0474"
FT                   /product="conserved hypothetical protein"
FT                   /note="Orthologue of E. coli YAJQ_ECOLI; Fasta hit to
FT                   YAJQ_ECOLI (169 aa), 90% identity in 169 aa overlap"
FT                   /db_xref="InterPro:IPR007551"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8W2"
FT                   /protein_id="CAD08891.1"
FT                   /translation="MKGEEKMPSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATI
FT                   ELNDANKTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLDVPDEFVHSGKTWYVEAKL
FT                   KQGIESAVQKKIVKLIKDSKLKVQAQIQGEEIRVTGKSRDDLQSVMALVRGDDLGQPFQ
FT                   FKNFRD"
FT   CDS             complement(229564..230928)
FT                   /transl_table=11
FT                   /gene="STY0475"
FT                   /product="hpothetical major facilitator family transport
FT                   protein"
FT                   /note="Orthologue of E. coli YAJR_ECOLI; Fasta hit to
FT                   YAJR_ECOLI (456 aa), 89% identity in 453 aa overlap"
FT                   /db_xref="GOA:Q8Z8W1"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="InterPro:IPR016196"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8W1"
FT                   /protein_id="CAD08892.1"
FT                   /translation="MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGA
FT                   SEALIGIAIGIYGLAQAIFQIPFGLLSDRIGRKPLIVGGLAVFVAGSVIAALSHSIWGI
FT                   ILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTHSLG
FT                   LNALFWMIAALATLGILLTIWVVPNSTNHVLNRESGMVKGSFSKVLAEPRLLKLNFGIM
FT                   CLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRRMKQVF
FT                   LFCVGLIIVAEIVLWGAGQHFWELVIGVQLFFLAFNLMEALLPSLISKESPAGYKGTAM
FT                   GVYSTSQFLGVALGGSLGGWIDGTFDGQTVFLAGAVLAMVWLAVASTMKEPPYVSSLRV
FT                   EIPADIVADDRLKQRLLAMKGVSEALIVAEEHSAYVKIDSKVTNRFEVEQLISKG"
FT   misc_feature    complement(229714..230904)
FT                   /note="Pfam match to entry PF00083 sugar_tr, Sugar (and
FT                   other) transporter, score -74.80, E-value 0.00035"
FT   CDS             231464..232135
FT                   /transl_table=11
FT                   /gene="STY0476"
FT                   /product="probable secreted protein"
FT                   /note="Similar to several hypotheical proteins from
FT                   Helicobacter pylori J99 e.g. putative jhp0148 TR:Q9ZMS0
FT                   (EMBL:AE001453) (305 aa) fasta scores: E(): 2.6e-05, 39.6%
FT                   id in 91 aa, and to Helicobacter pylori J99 putative
FT                   jhp0318 TR:Q9ZMA4 (EMBL:AE001468) (251 aa) fasta scores:
FT                   E(): 0.00073, 38.2% id in 68 aa. Contains probable
FT                   N-terminal signal sequence"
FT                   /db_xref="GOA:Q8Z8W0"
FT                   /db_xref="HSSP:1KLX"
FT                   /db_xref="InterPro:IPR006597"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8W0"
FT                   /protein_id="CAD08893.1"
FT                   /translation="MKIKFLSLCILAGVLFANQVNASENNSKDDVKYAALTQKDFDALP
FT                   VEKRASVLDELGFIHEYGLNVPMNREQALQYYKQACELGGNYGCYNVKYAYQHGDGVAK
FT                   DSAQANKYAKKMNLDNLLIEQEYIDKFSQEIYVAKALADMDKSQRAAFISILIHALNNR
FT                   PESDALFLVVSDLIRKKRSALLRYGGRTAIHKWIINWGYSPLMISLAIMWMSLIKPGRP
FT                   R"
FT   CDS             232048..232593
FT                   /transl_table=11
FT                   /gene="STY0477"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to parts of e.g. Escherichia coli
FT                   hypothetical 37.3 kDa protein in leus-gltl intergenic
FT                   region ybeQ SW:YBEQ_ECOLI (P77234) (327 aa) fasta scores:
FT                   E(): 6.2e-06, 34.2% id in 120 aa, and to Pseudomonas
FT                   indigofera hypothetical 28.4 kDa protein TR:Q9RBX2
FT                   (EMBL:AF088857) (268 aa) fasta scores: E(): 7.2e-06, 34.2%
FT                   id in 117 aa"
FT                   /db_xref="GOA:Q8Z8V9"
FT                   /db_xref="InterPro:IPR006597"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V9"
FT                   /protein_id="CAD08894.1"
FT                   /translation="MDYQLGLLTLNDFSGHYVDEPYKARPASLKWFRAAAEKGVVEAQS
FT                   LLGGIYSGGEGDEWGIKPDIQEAQKWYGQASEQGDSDAQIALGKIYYSGATGRTDYAKA
FT                   LALFTQVENDGTNSRSTMPLSWMYYNGLGTAPDCDKAWSYYKKASRYVGKKVEEKIFLS
FT                   KCAADIQSRKKTRMLYPK"
FT   CDS             232689..232973
FT                   /transl_table=11
FT                   /gene="STY0478"
FT                   /product="hypothetical protein"
FT                   /note="No database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V8"
FT                   /protein_id="CAD08895.1"
FT                   /translation="MANLHITLELKNADGMATEETLMIPPFGLNTLGIDMQNHDVDPLI
FT                   TPYDLPLYTQDFCHGIGDIHFTLKSATATINGKNVDLLKADSVHFLDKE"
FT   CDS             232985..233248
FT                   /transl_table=11
FT                   /gene="STY0479"
FT                   /product="probable secreted protein"
FT                   /note="Similar to part of Helicobacter pylori J99 putative
FT                   jhp0318 TR:Q9ZMA4 (EMBL:AE001468) (251 aa) fasta scores:
FT                   E(): 0.039, 39.3% id in 56 aa. Contains probable N-terminal
FT                   signal sequence"
FT                   /db_xref="GOA:Q8Z8V7"
FT                   /db_xref="InterPro:IPR006597"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V7"
FT                   /protein_id="CAD08896.1"
FT                   /translation="MIKRKWNLLLLLGFSFASVCQAGDDIDALYSRIAQKDVQALNELK
FT                   ALAKDNNAQALAELGFIYEYGVAVPKDTIQAIKYYEQACHVE"
FT   CDS             233300..234454
FT                   /transl_table=11
FT                   /gene="STY0480"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to parts of Mus musculus selll sel1L
FT                   TR:Q9Z2G6 (EMBL:AF063095) (740 aa) fasta scores: E():
FT                   3.3e-11, 29.5% id in 224 aa, and to Homo sapiens Tsa305
FT                   tsa305 TR:Q9UBV2 (EMBL:AB024763) (794 aa) fasta scores:
FT                   E(): 3.5e-11, 29.5% id in 224 aa, and to Helicobacter
FT                   pylori conserved hypothetical secreted protein hp0235
FT                   TR:O25021 (EMBL:AE000543) (355 aa) fasta scores: E():
FT                   2.6e-09, 29.2% id in 137 aa, and to Coxiella burnetii
FT                   immunoreactive protein TR:Q9RN76 (EMBL:AF185288) (469 aa)
FT                   fasta scores: E(): 7.1e-08, 31.4% id in 172 aa"
FT                   /db_xref="GOA:Q8Z8V6"
FT                   /db_xref="InterPro:IPR006597"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V6"
FT                   /protein_id="CAD08897.1"
FT                   /translation="MQDDVLAKELADKTSKADIDTDAQTVTRLIADEIDTAKQAAESDI
FT                   TQRSRFIETLRQYAGGGSAMAARITRLGYSKADILHLAELWAQERDPELNFIVGSLYDS
FT                   GFVEVDDKEARSLQWFRKAAELGQADAQNILGYFYLNGKRGIKRDLQKGGQWYELAAAQ
FT                   GNVDALINLGEIYYSGTRVPLDYARAFEFFERAAKMGKSRALNYLAWMYTNGQFVDTDC
FT                   RKAAELFAQGRTSFADDPHFQVTCEKDRQARAEAVAMREKNLPKLTFNRDRVFGASQGS
FT                   GYACELEFVVKTDRVSSIENLRVSLALKNKAGAMSQQVIAFEPFGLNMQNRNLQGYKSD
FT                   TLRESTLQPIYQPEFCDVDSYSVTAVTGIVNGKEMDILKAGIFI"
FT   CDS             complement(234502..235392)
FT                   /transl_table=11
FT                   /gene="STY0481"
FT                   /gene_synonym="cyoE"
FT                   /product="cytochrome o ubiquinol oxidase C subunit"
FT                   /note="Orthologue of E. coli cyoE (CYOE_ECOLI); Fasta hit
FT                   to CYOE_ECOLI (296 aa), 96% identity in 296 aa overlap"
FT                   /db_xref="GOA:Q8Z8V5"
FT                   /db_xref="InterPro:IPR000537"
FT                   /db_xref="InterPro:IPR006369"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8V5"
FT                   /protein_id="CAD08898.1"
FT                   /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVG
FT                   VSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPGVSLVYATLLGIAGFMLLWFG
FT                   ANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGDFDSGAA
FT                   ILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVIKGISVAKNHITLYIIAFAVATLM
FT                   LTLGGYAGYKYLVVAAAVSVWWLGMALRGYKVEDDKVWARKLFGFSIIAITALSIMMSV
FT                   DFMVPNSQNLLTYVW"
FT   misc_feature    complement(234541..235350)
FT                   /note="Pfam match to entry PF01040 UbiA, UbiA
FT                   prenyltransferase family, score 433.10, E-value 2.5e-126"
FT   misc_feature    complement(235156..235224)
FT                   /note="PS00943 UbiA prenyltransferase family signature"
FT   misc_feature    complement(235231..235263)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             complement(235404..235733)
FT                   /transl_table=11
FT                   /gene="STY0482"
FT                   /gene_synonym="cyoD"
FT                   /product="cytochrome o ubiquinol oxidase C subunit"
FT                   /note="Orthologue of E. coli cyoD (CYOD_ECOLI); Fasta hit
FT                   to CYOD_ECOLI (109 aa), 94% identity in 109 aa overlap"
FT                   /db_xref="GOA:Q8XFT4"
FT                   /db_xref="InterPro:IPR005171"
FT                   /db_xref="InterPro:IPR014210"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFT4"
FT                   /protein_id="CAD08899.1"
FT                   /translation="MSHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASPAV
FT                   ILGSILAMAVVQILVHLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNY
FT                   NMMMH"
FT   CDS             complement(235733..236347)
FT                   /transl_table=11
FT                   /gene="STY0483"
FT                   /gene_synonym="cyoC"
FT                   /product="cytochrome o ubiquinol oxidase subunit III"
FT                   /note="Orthologue of E. coli cyoC (CYOC_ECOLI); Fasta hit
FT                   to CYOC_ECOLI (204 aa), 97% identity in 204 aa overlap"
FT                   /db_xref="GOA:Q8Z8V4"
FT                   /db_xref="HSSP:1FFT"
FT                   /db_xref="InterPro:IPR000298"
FT                   /db_xref="InterPro:IPR013833"
FT                   /db_xref="InterPro:IPR014206"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V4"
FT                   /protein_id="CAD08900.1"
FT                   /translation="MATDTLTHATAHAHEHGHHDAGQNKIFGFWVYLMSDCILFSILFA
FT                   TYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMHKNNKSQVISWLAL
FT                   TFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQ
FT                   VARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM"
FT   misc_feature    complement(235739..236347)
FT                   /note="Pfam match to entry PF00510 COX3, Cytochrome c
FT                   oxidase subunit III, score -165.50, E-value 3.3e-05"
FT   CDS             complement(236337..238328)
FT                   /transl_table=11
FT                   /gene="STY0484"
FT                   /gene_synonym="cyoB"
FT                   /product="cytochrome o ubiquinol oxidase subunit I"
FT                   /note="Orthologue of E. coli cyoB (CYOB_ECOLI); Fasta hit
FT                   to CYOB_ECOLI (663 aa), 96% identity in 663 aa overlap"
FT                   /db_xref="GOA:Q8XG02"
FT                   /db_xref="HSSP:1FFT"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR014207"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XG02"
FT                   /protein_id="CAD08901.1"
FT                   /translation="MFGKLSLDAVPFHEPIVMVTIAAIIVGGLAILAAITYFGKWTYLW
FT                   KEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFT
FT                   AHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVG
FT                   EFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTM
FT                   FKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWA
FT                   WGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGA
FT                   GANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGV
FT                   LLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFW
FT                   FWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIF
FT                   VSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQ
FT                   PGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVD
FT                   YYVPVPEVEKLENQHFDEITKAGLKNGN"
FT   misc_feature    complement(236814..238190)
FT                   /note="Pfam match to entry PF00115 COX1, Cytochrome C and
FT                   Quinol oxidase polypeptide I, score 901.20, E-value 3e-267"
FT   misc_feature    complement(237327..237491)
FT                   /note="PS00077 Heme-copper oxidase catalytic subunit,
FT                   copper B binding region signature"
FT   CDS             complement(238339..239295)
FT                   /transl_table=11
FT                   /gene="STY0485"
FT                   /gene_synonym="cyoA"
FT                   /product="cytochrome o ubiquinol oxidase subunit II"
FT                   /note="Orthologue of E. coli cyoA (CYOA_ECOLI); Fasta hit
FT                   to CYOA_ECOLI (315 aa), 96% identity in 315 aa overlap"
FT                   /db_xref="GOA:Q8XF13"
FT                   /db_xref="HSSP:1FFT"
FT                   /db_xref="InterPro:IPR002429"
FT                   /db_xref="InterPro:IPR006333"
FT                   /db_xref="InterPro:IPR008972"
FT                   /db_xref="InterPro:IPR010514"
FT                   /db_xref="InterPro:IPR011759"
FT                   /db_xref="InterPro:IPR012141"
FT                   /db_xref="InterPro:IPR015964"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XF13"
FT                   /protein_id="CAD08902.1"
FT                   /translation="MRLRKYNKSLGWLSLIAGTALLSGCNSALLDPKGQIGLEQRSLIL
FT                   TAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLA
FT                   VLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYF
FT                   KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA
FT                   IATKDRAEFDQWVAKAKQSPNTMNDMAAFEKVAMPSEYNKVEYFSSVKPDLFKDVINKF
FT                   MGHGKSMDMTQPEGEHSSHEGMEGMDMSHAESANSKG"
FT   CDS             complement(239748..241223)
FT                   /transl_table=11
FT                   /gene="STY0486"
FT                   /gene_synonym="ampG"
FT                   /product="AmpG protein"
FT                   /note="Orthologue of E. coli ampG (AMPG_ECOLI); Fasta hit
FT                   to AMPG_ECOLI (491 aa), 91% identity in 490 aa overlap"
FT                   /db_xref="GOA:Q8Z8V3"
FT                   /db_xref="InterPro:IPR004752"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="InterPro:IPR016196"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V3"
FT                   /protein_id="CAD08903.1"
FT                   /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENID
FT                   LKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLAAIAAMGFLEPG
FT                   TQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLA
FT                   LWLADRWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPSPKSLEQAVVAPLRDFFGRN
FT                   NAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGI
FT                   LMQRLSLFRALLIFGILQGASNAGYWLLSITDKNMFSMGAAVFFENLCGGMGTAAFVAL
FT                   LMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVVAAVPGLLLL
FT                   LVCRQTLEYSWQSERFIPRTQYRGTYNFALSILLAGVALLAVWVLLLTMNALDYTNFSF
FT                   LPELLETAVAIAVCGIVFGGLLDYLALRKTRLL"
FT   CDS             complement(241267..241845)
FT                   /transl_table=11
FT                   /gene="STY0487"
FT                   /gene_synonym="yajG"
FT                   /product="putative lipoprotein"
FT                   /note="Orthologue of E. coli yajG (YAJG_ECOLI); Fasta hit
FT                   to YAJG_ECOLI (192 aa), 90% identity in 192 aa overlap"
FT                   /db_xref="InterPro:IPR005619"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V2"
FT                   /protein_id="CAD08904.1"
FT                   /translation="MLKKLLFPLVALFMLAGCATPPTTIDVAPKITLPQQDPSLMGVTV
FT                   SITGADQRQDQALAKVTRNNQLVTLTASRDLRFLLQEVLEKQMTARGYMIGPNGAVNLQ
FT                   IIVNQLYADVSQGSVRYNIATKADIAIIATAANGNKMTKNYRANYSIEGAFQASNQNIA
FT                   DAVNSVLTDTIADMSQDTSIHDFIKQNAR"
FT   misc_feature    complement(241792..241824)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site"
FT   CDS             242149..242466
FT                   /transl_table=11
FT                   /gene="STY0488"
FT                   /gene_synonym="bolA"
FT                   /product="BolA protein"
FT                   /note="Orthologue of E. coli bolA (BOLA_ECOLI); Fasta hit
FT                   to BOLA_ECOLI (105 aa), 92% identity in 105 aa overlap"
FT                   /db_xref="HSSP:1V9J"
FT                   /db_xref="InterPro:IPR002634"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFC2"
FT                   /protein_id="CAD08905.1"
FT                   /translation="MMIREQIEEKLRTAFDPVFLEVVDESYRHNVPAGSESHFKVVLVS
FT                   DRFTGERFLNRHRMIYGTLTAELSTTVHALALHTYTLKEWEGLQDTIFASPPCRGAGSI
FT                   A"
FT   misc_feature    242176..242403
FT                   /note="Pfam match to entry PF01722 BolA, BolA-like protein,
FT                   score 134.70, E-value 1.7e-36"
FT   CDS             242813..244111
FT                   /transl_table=11
FT                   /gene="STY0489"
FT                   /gene_synonym="tig"
FT                   /product="trigger factor"
FT                   /note="Orthologue of E. coli tig (TIG_ECOLI); Fasta hit to
FT                   TIG_ECOLI (432 aa), 95% identity in 432 aa overlap"
FT                   /db_xref="GOA:P66933"
FT                   /db_xref="InterPro:IPR001179"
FT                   /db_xref="InterPro:IPR005215"
FT                   /db_xref="InterPro:IPR008880"
FT                   /db_xref="InterPro:IPR008881"
FT                   /db_xref="UniProtKB/Swiss-Prot:P66933"
FT                   /protein_id="CAD08906.1"
FT                   /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFR
FT                   KGKVPMNIVAQRYGASVRQDVLGDLMSRNFVDAIIKEKINPAGAPNYVPGEYKVGEDFT
FT                   YSVEFEVYPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADAEDR
FT                   VTIDFTGSVDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFPEEYH
FT                   AENLKGKAAKFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGA
FT                   VRNRVKSQAIEGLVKANDIDVPSALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQ
FT                   AKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMR
FT                   NVALEEQAVEAVLAKAKVSEKATSFNELMNQQA"
FT   CDS             244358..244981
FT                   /transl_table=11
FT                   /gene="STY0490"
FT                   /gene_synonym="clpP"
FT                   /product="ATP-dependent clp protease proteolytic subunit"
FT                   /note="Orthologue of E. coli clpP (CLPP_ECOLI); Fasta hit
FT                   to CLPP_ECOLI (207 aa), 99% identity in 207 aa overlap"
FT                   /db_xref="GOA:P0A1D8"
FT                   /db_xref="InterPro:IPR001907"
FT                   /db_xref="InterPro:IPR018215"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1D8"
FT                   /protein_id="CAD08907.1"
FT                   /translation="MSYSGERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFL
FT                   TGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTI
FT                   CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRM
FT                   NELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
FT   misc_feature    244403..244972
FT                   /note="Pfam match to entry PF00574 CLP_protease, Clp
FT                   protease, score 476.70, E-value 1.9e-139"
FT   misc_feature    244664..244699
FT                   /note="PS00381 Endopeptidase Clp serine active site"
FT   misc_feature    244730..244771
FT                   /note="PS00382 Endopeptidase Clp histidine active site"
FT   CDS             245233..246504
FT                   /transl_table=11
FT                   /gene="STY0491"
FT                   /gene_synonym="clpX"
FT                   /product="ATP-dependent clp protease ATP-binding subunit
FT                   ClpX"
FT                   /note="Orthologue of E. coli clpX (CLPX_ECOLI); Fasta hit
FT                   to CLPX_ECOLI (423 aa), 98% identity in 423 aa overlap"
FT                   /db_xref="GOA:Q8Z8V1"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR004487"
FT                   /db_xref="InterPro:IPR010603"
FT                   /db_xref="InterPro:IPR013093"
FT                   /db_xref="InterPro:IPR019489"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8V1"
FT                   /protein_id="CAD08908.1"
FT                   /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCN
FT                   DIIREEIKEVAPHRERSALPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDT
FT                   SNGVELGKSNILLTGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQ
FT                   KLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAV
FT                   PPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAKSDKA
FT                   SEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALVQILKEPKNALTKQYQAL
FT                   FNLEGVDLEFRDEALNAIARKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVID
FT                   ESVIAGQSKPLLIYGKPEAQASGE"
FT   misc_feature    245572..246351
FT                   /note="Pfam match to entry PF00004 AAA, ATPases associated
FT                   with various cellular activities (AAA), score -7.10,
FT                   E-value 9.4e-05"
FT   misc_feature    245587..245610
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   CDS             246690..249044
FT                   /transl_table=11
FT                   /gene="STY0492"
FT                   /gene_synonym="lon"
FT                   /product="Lon protease"
FT                   /note="Orthologue of E. coli lon (LON_ECOLI); Fasta hit to
FT                   LON_ECOLI (784 aa), 100% identity in 784 aa overlap"
FT                   /db_xref="GOA:Q8Z8V0"
FT                   /db_xref="HSSP:1RR9"
FT                   /db_xref="InterPro:IPR001984"
FT                   /db_xref="InterPro:IPR003111"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR003959"
FT                   /db_xref="InterPro:IPR004815"
FT                   /db_xref="InterPro:IPR008268"
FT                   /db_xref="InterPro:IPR008269"
FT                   /db_xref="InterPro:IPR020568"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8V0"
FT                   /protein_id="CAD08909.1"
FT                   /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMD
FT                   HDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALS
FT                   DNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPA
FT                   RLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQME
FT                   KSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMM
FT                   SPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAV
FT                   QSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYI
FT                   GSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLE
FT                   VDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALK
FT                   KGELTVDDSAIIGIIRYYTREAGVRSLEREISKLCRKAVKQLLLDKSLKHIEINGDNLH
FT                   DYLGVQRFDYGRADSENRVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQ
FT                   ESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTG
FT                   NPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIA
FT                   DLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
FT   misc_feature    246717..247295
FT                   /note="Pfam match to entry PF02190 LON, ATP-dependent
FT                   protease La (LON) domain, score 276.50, E-value 3.3e-79"
FT   misc_feature    247740..248324
FT                   /note="Pfam match to entry PF00004 AAA, ATPases associated
FT                   with various cellular activities (AAA), score 99.60,
FT                   E-value 5.9e-26"
FT   misc_feature    247755..247778
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    248715..248741
FT                   /note="PS01046 ATP-dependent serine proteases, lon family,
FT                   serine active site"
FT   misc_feature    249253..249522
FT                   /note="Pfam match to entry PF00216 Bac_DNA_binding,
FT                   Bacterial DNA-binding protein, score 178.50, E-value
FT                   2.7e-50"
FT   CDS             249253..249525
FT                   /transl_table=11
FT                   /gene="STY0493"
FT                   /gene_synonym="hupB"
FT                   /product="DNA-binding protein HU-beta"
FT                   /note="Fasta hit to DBHA_ECOLI (90 aa), 67% identity in 89
FT                   aa overlap"
FT                   /note="Fasta hit to IHFB_ECOLI (94 aa), 35% identity in 91
FT                   aa overlap"
FT                   /note="Fasta hit to IHFA_ECOLI (99 aa), 34% identity in 89
FT                   aa overlap"
FT                   /note="Orthologue of E. coli hupB (DBHB_ECOLI); Fasta hit
FT                   to DBHB_ECOLI (90 aa), 98% identity in 90 aa overlap"
FT                   /db_xref="GOA:P0A1R9"
FT                   /db_xref="InterPro:IPR000119"
FT                   /db_xref="InterPro:IPR010992"
FT                   /db_xref="InterPro:IPR020816"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A1R9"
FT                   /protein_id="CAD08910.1"
FT                   /translation="MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALV
FT                   GFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
FT   misc_feature    249388..249447
FT                   /note="PS00045 Bacterial histone-like DNA-binding proteins
FT                   signature"
FT   CDS             249816..251687
FT                   /transl_table=11
FT                   /gene="ppiD"
FT                   /gene_synonym="STY0494"
FT                   /product="peptidyl-prolyl cis-trans isomerase D"
FT                   /EC_number="5.2.1.8"
FT                   /note="Similar to Escherichia coli peptidyl-prolyl
FT                   cis-trans isomerase d ppiD SW:CYPD_ECOLI (P77241) (623 aa)
FT                   fasta scores: E(): 0, 88.5% id in 624 aa"
FT                   /note="Orthologue of E. coli CYPD_ECOLI; Fasta hit to
FT                   CYPD_ECOLI (623 aa), 89% identity in 624 aa overlap"
FT                   /db_xref="GOA:Q8Z8U9"
FT                   /db_xref="HSSP:1M5Y"
FT                   /db_xref="InterPro:IPR000297"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8U9"
FT                   /protein_id="CAD08911.1"
FT                   /translation="MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYLIGGSNNYAAKV
FT                   NGQEISRAQFENAFNNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQY
FT                   SRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYTQALRNQLTTQ
FT                   QLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNK
FT                   VRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDD
FT                   AKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISG
FT                   VIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAASNDN
FT                   ESLAGAEQVAGVKAVETGWFSRDTLPEELNFKPVADAIFNGGLVGENGTPGPNSDIITV
FT                   DGDRAFVVRVSEHKPEAVKPLAEVKEQVTALVKHNKAEQQAKLDAEKLLVELKAGKGAE
FT                   AMKAAGLSFGEPKTLSRTSQDPVSQAAFALSLPTKDKPVYGVANDMQGNVVLLAFDEVK
FT                   AGAMPEAQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
FT   misc_feature    250611..250880
FT                   /note="Pfam match to entry PF00639 Rotamase, PPIC-type
FT                   PPIASE domain., score 66.50, E-value 5.5e-16"
FT   misc_feature    250698..250763
FT                   /note="PS01096 PpiC-type peptidyl-prolyl cis-trans
FT                   isomerase signature"
FT   CDS             251837..252211
FT                   /transl_table=11
FT                   /gene="ybaV"
FT                   /gene_synonym="STY0495"
FT                   /product="putative exported protein"
FT                   /note="Similar to Escherichia coli hypothetical 12.7 kDa
FT                   protein in hupb-cof intergenic region ybaV SW:YBAV_ECOLI
FT                   (P77415) (123 aa) fasta scores: E(): 0, 83.9% id in 124 aa,
FT                   and to C-terminus of Streptococcus pneumoniae competence
FT                   protein celA TR:O85197 (EMBL:AF052208) (216 aa) fasta
FT                   scores: E(): 8.8e-05, 35.9% id in 92 aa, and Bacillus
FT                   subtilis come operon protein 1 comea or come1 SW:CME1_BACSU
FT                   (P39694) (205 aa) fasta scores: E(): 0.00047, 39.4% id in
FT                   71 aa. Contains probable N-terminal signal sequence"
FT                   /note="Orthologue of E. coli YBAV_ECOLI; Fasta hit to
FT                   YBAV_ECOLI (123 aa), 84% identity in 124 aa overlap"
FT                   /db_xref="GOA:Q8XGV0"
FT                   /db_xref="InterPro:IPR003583"
FT                   /db_xref="InterPro:IPR004509"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XGV0"
FT                   /protein_id="CAD08912.1"
FT                   /translation="MKHGIKALLITLSLTCAGMAHSALAATPVAKNAAVETKADTPSSS
FT                   SAKAALPAKASDDEGTRVSINTASAEDLARVMNGVGLKKAQAIVSYREEYGPFKTVDDL
FT                   KQVPGMGSALVERNLAVLTL"
FT   CDS             252315..252713
FT                   /transl_table=11
FT                   /gene="STY0496"
FT                   /product="conserved hypothetical protein"
FT                   /note="Fasta hit to YBGC_ECOLI (134 aa), 34% identity in
FT                   117 aa overlap"
FT                   /note="Orthologue of E. coli YBAW_ECOLI; Fasta hit to
FT                   YBAW_ECOLI (132 aa), 95% identity in 132 aa overlap"
FT                   /db_xref="GOA:Q8XFQ0"
FT                   /db_xref="HSSP:1NJK"
FT                   /db_xref="InterPro:IPR006683"
FT                   /db_xref="InterPro:IPR006684"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XFQ0"
FT                   /protein_id="CAD08913.1"
FT                   /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMT
FT                   ARNIAFVVVNININYRRPAVLSDLLTVTSQVQQLNGKSGVLSQTITLEPEGQVVADALI
FT                   TFVCIDLKTQKALPLEGELREKLEQMVQ"
FT   CDS             complement(252820..253515)
FT                   /transl_table=11
FT                   /gene="ybaX"
FT                   /gene_synonym="STY0497"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Escherichia coli hypothetical 25.5 kDa
FT                   protein in hupb-cof intergenic region ybaX SW:YBAX_ECOLI
FT                   (P77756) (231 aa) fasta scores: E(): 0, 93.9% id in 231 aa,
FT                   and to Arthrobacter viscosus aluminum resistance protein
FT                   alu1 TR:O52119 (EMBL:AF022216) (187 aa) fasta scores: E():
FT                   0, 57.1% id in 168 aa, and to Sinorhizobium meliloti ExsB
FT                   protein exsB TR:Q52925 (EMBL:Z50189) (234 aa) fasta scores:
FT                   E(): 2.4e-17, 31.7% id in 230 aa"
FT                   /note="Orthologue of E. coli YBAX_ECOLI; Fasta hit to
FT                   YBAX_ECOLI (231 aa), 94% identity in 231 aa overlap"
FT                   /db_xref="GOA:Q8XEU3"
FT                   /db_xref="InterPro:IPR001518"
FT                   /db_xref="InterPro:IPR004479"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR018317"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8XEU3"
FT                   /protein_id="CAD08914.1"
FT                   /translation="MKRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDV
FT                   ARALALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFL
FT                   TLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWI
FT                   DKAETWALADYWGQLDLVREETLTCYNGIKGDGCGHCAACNLRANGLNHYLSNKAAVMA
FT                   AMKQKTGLR"
FT   misc_feature    complement(253330..253503)
FT                   /note="Pfam match to entry PF00764 Arginosuc_synth,
FT                   Arginosuccinate synthase, score 24.30, E-value 4.7e-07"
FT   CDS             complement(253580..255280)
FT                   /transl_table=11
FT                   /gene="STY0498"
FT                   /gene_synonym="ybaE"
FT                   /product="putative solute-binding protein"
FT                   /note="Similar to Escherichia coli hypothetical protein
FT                   YbaE SW:YBAE_ECOLI (P46890; P77158) (566 aa) fasta scores:
FT                   E(): 0, 79.1% id in 565 aa. Also shows some similarity many
FT                   ABC transporter periplasmic binding proteins e.g. to
FT                   Bacillus subtilis oligopeptide-binding protein OppA or
FT                   spo0kA SW:OPPA_BACSU (P24141; P23399) (545 aa) fasta
FT                   scores: E(): 0.17, 40.0% id in 70 aa. Does not appear to
FT                   contain an N-terminal signal sequence"
FT                   /note="Orthologue of E. coli ybaE (YBAE_ECOLI); Fasta hit
FT                   to YBAE_ECOLI (566 aa), 79% identity in 565 aa overlap"
FT                   /db_xref="GOA:Q8Z8U8"
FT                   /db_xref="InterPro:IPR000914"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8U8"
FT                   /protein_id="CAD08915.1"
FT                   /translation="MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLR
FT                   QAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPGEL
FT                   RAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDRDSQ
FT                   YPCGDLAHHWKVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFIS
FT                   VARIEVTHPQCLTFLLHRPDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRL
FT                   ESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQVSSGISL
FT                   GFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDV
FT                   DETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWNNCPALAQADLM
FT                   MGDRLIGEAPEYTLEQWLRCDQIWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQV
FT                   FANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAWLPPPSP"
FT   misc_feature    complement(253598..253765)
FT                   /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial
FT                   extracellular solute-binding proteins, family 5, score
FT                   0.30, E-value 26"
FT   misc_feature    complement(254693..254836)
FT                   /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial
FT                   extracellular solute-binding proteins, family 5, score
FT                   20.90, E-value 4.6e-05"
FT   CDS             255380..256198
FT                   /transl_table=11
FT                   /gene="STY0499"
FT                   /product="conserved hypothetical protein"
FT                   /note="Fasta hit to YIGL_ECOLI (265 aa), 34% identity in
FT                   261 aa overlap"
FT                   /note="Orthologue of E. coli cof (COF_ECOLI); Fasta hit to
FT                   COF_ECOLI (272 aa), 81% identity in 272 aa overlap"
FT                   /db_xref="GOA:Q8Z8U7"
FT                   /db_xref="InterPro:IPR000150"
FT                   /db_xref="InterPro:IPR006379"
FT                   /db_xref="InterPro:IPR013200"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z8U7"
FT                   /protein_id="CAD08916.1"
FT                   /translation="MARLAAFDMDGTLLMPDHHLGRETIATLSRLRERDITLTFATGRH
FT                   VLEMRHILGTLSLDAYLITGNGTRIHSLEGDVLHRQDLDPQVADTVMHHAWDTRASMHV
FT                   FNDNGWFTGQEIPALLQAHVYSGFRYQVIDIKSIPAHQVTKICFCGDHDDLIRLRIQLN
FT                   EALEERAHLCFSAVDCLEVLPLGCNKGSALAVLSNHLGLSLADCMAFGDAMNDREMLGS
FT                   VGRGLIMGNAMPQLIAALPHLSVIGHCGNQAVSHFLTHWLDNPHLPYSPE"
FT   misc_feature    255389..255424
FT                   /note="PS01228 Hypothetical cof family signature 1"
FT   misc_feature    255389..256126
FT                   /note="Pfam match to entry PF00592 DUF3, Cof family DUF3,
FT                   score 318.60, E-value 7e-92"
FT   misc_feature    256007..256075
FT                   /note="PS01229 Hypothetical cof family signature 2"
FT   CDS             256385..256843
FT                   /transl_table=11
FT                   /gene="tnpA"
FT                   /gene_synonym="STY0500"
FT                   /product="transposase for insertion sequence element IS200"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi transposase for insertion sequence element is200 tnpA
FT                   SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 98.0%
FT                   id in 152 aa"
FT                   /db_xref="GOA:O54303"
FT                   /db_xref="InterPro:IPR002686"
FT                   /db_xref="UniProtKB/TrEMBL:O54303"
FT                   /protein_id="CAD08917.1"
FT                   /translation="MRDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLC
FT                   EWKNVRILEAECCADHIHMLLEIPTKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNRE
FT                   FWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSLFTGRK"
FT   misc_feature    256439..256750
FT                   /note="Pfam match to entry PF01797 Transposase_17,
FT                   Transposase IS200 like, score 237.30, E-value 2.1e-67"
FT   CDS             complement(256959..258014)
FT                   /transl_table=11
FT                   /gene="STY0501"
FT                   /product="putative lyase"
FT                   /note="Similar to Mycobacterium tuberculosis putative lyase
FT                   rv3684 or mtv025.032 TR:O69652 (EMBL:AL022121) (346 aa)
FT                   fasta scores: E(): 0, 61.5% id in 338 aa, and to
FT                   Cyanidioschyzon merolae O-acetylserine cmoastl2 TR:Q9SSV8
FT                   (EMBL:AB031004) (390 aa) fasta scores: E(): 2.3e-16, 27.4%
FT                   id in 329 aa, and to Emericella nidulans cysteine synthase
FT                   cysB SW:CYSK_EMENI (P50867) (371 aa) fasta scores: E():
FT                   1.7e-14, 25.6% id in 332 aa"
FT                   /db_xref="GOA:Q8Z8U6"
FT                   /db_xref="InterPro:IPR001926"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8U6"
FT                   /protein_id="CAD08918.1"
FT                   /translation="MMSSNWVKNAINEINADHQRSADTHLIRLPLSAFPGIQLYLKDES
FT                   THPTGSLKHRLARSLFLYGLCNGWIKEDTPIIEASSGSTAISEAWFARLLGLPFIAAMP
FT                   ACTAKRKIEQIQFYGGHCHFVESACEIYAASERLAHELNGHYMDQFTYAERATDWRGNN
FT                   NIADSIFRQMRNEPHPVPRFIVMSAGTGGTSATIGRYIRCQGYDTQLMVVDPENSVFLP
FT                   YWQDRDASLRSPVGSKIEGIGRPRVEPSFIPDVVDEMLRVPDAASVATAHWLETQLGRK
FT                   VGASTGTNMWGALQLAARMREAGETGAIVTLLCDSGDRYLDTYYHPAWVSDHIGDLTPW
FT                   SAAIAKLLTGD"
FT   misc_feature    complement(257067..257966)
FT                   /note="Pfam match to entry PF00291 PALP,
FT                   Pyridoxal-phosphate dependent enzyme, score 175.70, E-value
FT                   7.5e-49"
FT   CDS             258127..258585
FT                   /transl_table=11
FT                   /gene="ybaO"
FT                   /gene_synonym="STY0502"
FT                   /product="hypothetical transcriptional regulator"
FT                   /note="Similar to Escherichia coli hypothetical
FT                   transcriptional regulator in mdl-cof intergenic region ybaO
FT                   SW:YBAO_ECOLI (P54986; P71209; P77575) (152 aa) fasta
FT                   scores: E(): 0, 95.4% id in 152 aa, and to Zymomonas
FT                   mobilis glutamate uptake regulatory protein grP
FT                   SW:GRP_ZYMMO (P74996) (164 aa) fasta scores: E(): 9.7e-26,
FT                   44.0% id in 150 aa, and to Pseudomonas putida bkd operon
FT                   transcriptional regulator bkdR SW:BKDR_PSEPU (P42179) (161
FT                   aa) fasta scores: E(): 1.2e-17, 35.3% id in 153 aa"
FT                   /note="Fasta hit to LRP_ECOLI (163 aa), 34% identity in 151
FT                   aa overlap"
FT                   /note="Orthologue of E. coli YBAO_ECOLI; Fasta hit to
FT                   YBAO_ECOLI (152 aa), 95% identity in 152 aa overlap"
FT                   /db_xref="GOA:Q8XGC9"
FT                   /db_xref="InterPro:IPR000485"
FT                   /db_xref="InterPro:IPR011008"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR019885"
FT                   /db_xref="InterPro:IPR019887"
FT                   /db_xref="InterPro:IPR019888"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XGC9"
FT                   /protein_id="CAD08919.1"
FT                   /translation="MLDKIDRKLLCLLQQDCTLSLQALADAVNLTTTPCWKRLKRLEDD
FT                   GILLGRVALLDPEKLGLGLTAFVLIKTQHHSSEWYCRFVTVVSEMPEVLGFWRMAGEYD
FT                   YLMRVQVADMKRYDDFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE"
FT   misc_feature    258184..258264
FT                   /note="PS00519 Bacterial regulatory proteins, asnC family
FT                   signature"
FT   misc_feature    258202..258513
FT                   /note="Pfam match to entry PF01037 ASNC_trans_reg, AsnC
FT                   family, score 192.20, E-value 7.9e-54"
FT   CDS             258626..260398
FT                   /transl_table=11
FT                   /gene="mdlA"
FT                   /gene_synonym="STY0503"
FT                   /product="putative ABC transporter ATP-binding membrane
FT                   protein"
FT                   /note="Similar to Escherichia coli multidrug
FT                   resistance-like ATP-binding protein mdla mdla or mdL
FT                   SW:MDLA_ECOLI (P77265; P30751) (590 aa) fasta scores: E():
FT                   0, 89.0% id in 590 aa, and to many ABC transporters e.g.
FT                   Bacillus subtilis hypothetical 65.1 kDa protein yheI
FT                   TR:O07550 (EMBL:Y14080) (585 aa) fasta scores: E(): 0,
FT                   39.8% id in 575 aa, and to Thermotoga maritima ABC
FT                   transporter, ATP-binding protein tm1256 TR:Q9X0Y3
FT                   (EMBL:AE001781) (577 aa) fasta scores: E(): 0, 33.3% id in
FT                   567 aa"
FT                   /note="Orthologue of E. coli mdlA (MDLA_ECOLI); Fasta hit
FT                   to MDLA_ECOLI (590 aa), 89% identity in 590 aa overlap"
FT                   /db_xref="GOA:Q8Z8U5"
FT                   /db_xref="HSSP:1MT0"
FT                   /db_xref="InterPro:IPR001140"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR011527"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR017940"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8U5"
FT                   /protein_id="CAD08920.1"
FT                   /translation="MRLFAQLSWYFRREWRRYLGAVALLMLIAMLQLIPPKVVGIVVDG
FT                   VTAQHFTPGRIAMWIGTIALIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQH
FT                   PEFYQRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLL
FT                   ALLPMPIMALMIKRYGDRLHDYFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSSL
FT                   FAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAISGGSWMVVNGSLTLGELTSFM
FT                   MYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGEEPVPAGRGELTAAIR
FT                   EFCYPQTTHPALENVNFRLKPGQMLGICGPTGAGKSTILSLIQRHFDVTQGEIRFHDMP
FT                   LTHLQLDSWRSRLAVVSQTPFLFSDSIANNIALGRPEATQEEIERVARLASVHEDILRL
FT                   PQGYDTQVGERGVMLSGGQKQRISIARALLLNAEILLLDDALSAVDGRTEHQILHNLRQ
FT                   WGEGRTVIISAHRLSALTDANEIIVMQHGHVVQRGDHDQLAQQIGWYRDMYRYQQLEAA
FT                   LDDAPERGEEAVNA"
FT   misc_feature    258677..259498
FT                   /note="Pfam match to entry PF00664 ABC_membrane, ABC
FT                   transporter transmembrane region., score 222.20, E-value
FT                   7.7e-63"
FT   misc_feature    259709..260263
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 188.70, E-value 9e-53"
FT   misc_feature    259730..259753
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    260042..260086
FT                   /note="PS00211 ABC transporters family signature"
FT   CDS             260391..262172
FT                   /transl_table=11
FT                   /gene="STY0504"
FT                   /gene_synonym="mdlB"
FT                   /product="putative ABC transporter ATP-binding membrane
FT                   protein"
FT                   /note="Similar to Escherichia coli multidrug
FT                   resistance-like ATP-binding protein mdlb mdlb or mdL
FT                   SW:MDLB_ECOLI (P75706; P30751; P77117) (593 aa) fasta
FT                   scores: E(): 0, 87.7% id in 593 aa, and to many ABC
FT                   transporters e.g. Mycobacterium tuberculosis hypothetical
FT                   ABC transporter ATP-binding protein rv1272c rv1272c or
FT                   mtcy50.10 SW:YC72_MYCTU (Q11047) (631 aa) fasta scores:
FT                   E(): 0, 35.0% id in 523 aa, and to Rattus norvegicus
FT                   tap-like ABC transporter tapL TR:Q9QYJ4 (EMBL:AB027520)
FT                   (762 aa) fasta scores: E(): 0, 33.2% id in 585 aa"
FT                   /note="Orthologue of E. coli mdlB (MDLB_ECOLI); Fasta hit
FT                   to MDLB_ECOLI (593 aa), 88% identity in 593 aa overlap"
FT                   /db_xref="GOA:Q8Z8U4"
FT                   /db_xref="HSSP:1MV5"
FT                   /db_xref="InterPro:IPR001140"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR011527"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR017940"
FT                   /db_xref="UniProtKB/TrEMBL:Q8Z8U4"
FT                   /protein_id="CAD08921.1"
FT                   /translation="MRSFGQLWPTLKRLLAYGSPWRKPLSVAVMMLWIAVAAEVSGPLL
FT                   ISYFIDNMVARHHLPLGKVAGLAAAYVGLQFLAAGLHYAQSLLFNRAAVGVVQSLRTDV
FT                   MDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSL
FT                   DWRMALVAVLIFPAVLTVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQ
FT                   QARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFSFTSAGTIEV
FT                   GVLYAFISYLSRLNEPLIELTTQQSMLQQAVVAGERVFELMDRPRQRYGSDDRPLQSGA
FT                   IDIDHLSFAYRDDNLVLQDITLSVPSRSFVALVGHTGSGKSTLASLLMGYYPLTQGEIR
FT                   LDGREIASLNHRVLRQGVAMVQQDPVVMADTFLANVTLGRDVSEAQVWQALETVQLADL
FT                   ARGLSDGLHTHLGEQGNTLSVGQKQLLALARVLVDAPQILILDEATASIDSGTEQAIQQ
FT                   ALAAIRERTTLVVIAHRLSTIVEADTILVLYRGQAVERGTHQQLLAAQGRYWQMYQLQL
FT                   VGEELAASVHEESGPTA"
FT   misc_feature    260463..261284
FT                   /note="Pfam match to entry PF00664 ABC_membrane, ABC
FT                   transporter transmembrane region., score 116.40, E-value
FT                   5.3e-31"
FT   misc_feature    261489..262040
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 163.50, E-value 3.6e-45"
FT   misc_feature    261510..261533
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)"
FT   misc_feature    261819..261863
FT                   /note="PS00211 ABC transporters family signature"
FT   misc_feature    262385..262720
FT                   /note="Pfam match to entry PF00543 P-II, Nitrogen
FT                   regulatory protein P-II, score 181.20, E-value 2.2e-53"
FT   CDS             26