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EBI DbfetchID AK241333; SV 1; linear; mRNA; STD; PLN; 3740 BP. XX AC AK241333; XX DT 11-OCT-2006 (Rel. 89, Created) DT 19-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group cDNA, clone: J065144I22, full insert sequence. XX KW CAP trapper; FLI_CDNA. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-3740 RA Kikuchi S., Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., RA Doi K., Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., RA Hayashida K., Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., RA Hotta I., Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., RA Ishii Y., Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., RA Kawagashira N., Kawai J., Kawamata M., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakahama Y., Nakamura M., Namiki T., RA Narikawa R., Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., RA Ohno M., Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., RA Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., RA Satoh K., Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., RA Sugano S., Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., RA Tagawa A., Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., RA Tsunoda Y., Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., RA Yasunishi A., Yazaki J., Yokomizo S., Yoshimura A., Eguchi K., Kanamori H., RA Yamagata H., Kamiya K., Kurita K., Kikuta A., Bito T.; RT ; RL Submitted (10-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Division of Genome and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, RL Ibaraki 305-8602, Japan XX RN [2] RA Kikuchi S.; RT "Oryza sativa full length cDNA"; RL Unpublished. XX DR GOA; Q0DGG8. DR InterPro; IPR001451; Hexapep_transf. DR InterPro; IPR005881; Ser_O-AcTrfase. DR InterPro; IPR010493; Ser_AcTrfase_N. DR InterPro; IPR011004; Trimer_LpxA-like. DR InterPro; IPR018357; Hexapep_transf_CS. DR UniProtKB/Swiss-Prot; Q0DGG8; SAT5_ORYSJ. XX CC This clone is one of the 2.6K full-length cDNA clones from CC japonica rice. CC URL:http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., CC Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., CC Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., CC Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., CC Yamamoto,M. and Nakahama,Y. CC NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H., CC Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., CC Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., CC Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., CC Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., CC Yoshimura,A., Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences Center CC and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., CC Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., CC Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., CC Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., CC Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., CC Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., CC Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., CC Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., CC Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., CC Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..3740 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="J065144I22" FT /tissue_type="leaf of seedling" FT /note="gamma-irradiated (4min), after 6hr" FT /db_xref="taxon:39947" XX SQ Sequence 3740 BP; 865 A; 995 C; 1007 G; 873 T; 0 other; gtgtagtgtg aggagaagat ggagtttctg tcatcagttt catatctttt caaggctctc 60 tgcacatgtg gtgttgcatt tgtcactggg tggtttgctc actgggtgta cagatggatg 120 aatccccaat gcgatgggaa gctccctcct ggctccatgg gcttgcctct tgttggtgag 180 acattccgct tctttagagc gagcgcatct attgacatgc cgagctacta caaggaaagg 240 ctcaagagat atgggccaat cttcaagaca agcctagtgg ggcagcctct ggtcatttcc 300 ctcgatccag aggtgaaccg gttcgtgttc cagcaggagg gcaagctgtt ccgtagctgg 360 tacccagaga cgacgaacac catctttggc aagaaaagcc tcaccacgta tagtggtgcc 420 gttaataagt tcgtccggag tttcgcgtcc aagctctttg gccctacaaa cttgaaagaa 480 tcactccttc ctgaactgga gagcgccgtg agggagagct tcgcgacgtg ggtcatgaac 540 cccagcattg aggtgaagga cggcatatcg aatatgatat ttgatctggt cgctaagaag 600 ttgattggct tcaaccccac caagtcaaga gaattgagga aaaactttca ggagttcttc 660 cagggaatgg tctctttccc catatatttt ccagggacat cattttaccg atgcatgcag 720 gaggagcata caacgatcct gaacaaacga ggcagtctga attctgggtt cacttgggaa 780 gagtacaaat ccttgatgtt cacttcacag gttgtccacg aaattactcg aattagtaac 840 gttgcacctg gaattttcag gaaaacccta gcagatgtga aagtgaaagg ctatacaatc 900 ccagctgggt ggctagtcat gattagcccc atggcagttg atctaaaccc aacattgttt 960 gaagacccac tcgaattcaa tccatggagg tggacggaca agacaaagca gagtgagcta 1020 ctaaggaatt acatgccatt tggaggaggc ataagactct gtctcggggc agagtttagc 1080 aagcttttta ttgccctttt catccacgtc ttggtgactg agtacagatg gaaagagatc 1140 aaaggaggtg atgtactgcg catctcagag gttatattcc cacaaggcta tcatatccaa 1200 cttatccctc atacctaatt aaaattgtgt caagggaatt gtacccaaca ctttcttgtg 1260 agcaatgtaa agcgttatga ttgggtacag tcagtgagtt tctgtgaatg catttgtgta 1320 ataagcaaga tcagcgacat aacagagttg ctagggtcgg attacatcct taccacaaca 1380 tcgactctga gcacccggct acctatgagt actaccttca ttttatttgg aactttcagt 1440 acgtaactgt cctatttgct cgttgtgttt catatatctc atattggatt ttgtcatatg 1500 agcacacaac ttcaaaaagg aaaaaacttg ttcggaacac ctgattaaag atggtttaat 1560 gtaaatgtct ataattaatg aattttattt taggtggtcc aaaaaaaaaa aaaaaataac 1620 ggttggatcc aaacgtgctt tttttttttt ttttagttcg catgatgaac atattatttg 1680 ccagtcacaa aaccatcatt tgaggtacgc agccatggcc catgggtcat ccgaccacaa 1740 ttggaatagt tttgcatagt gtaaaggaaa atcagcaggc tcttgctaac tttgaggcga 1800 tacttaaaga gtagaccaga attggcgata tcagacaaga tgatgagata gctagttcaa 1860 caacactcca aaaaacctcc atcaagatgg accgatccaa ccaaacagcg tttacttgtc 1920 ttccccttca gaatgagcag aaggaacggt cgaaactttg ggtgaccact ttggaggagc 1980 accattgaat aagtatgaac attcagtgta cgcagctcct atccccacac cagctccgag 2040 cgcaactgat gcccagcgag tagttgggct acggaagagg aggaggcccg cgaaggtgcc 2100 acccagggtg gagtaggcga cgcggcggat ggagatgtcg aggcaggcgt cccacttggc 2160 gtccaggtcg taccgcggcg ggatccccga cttggtgggc ggagatgacg gcggcggcgg 2220 cggggccggg gtgggcgcgg gcgctggggc cggagccgcg gccggggcgg cgttctcggg 2280 cgactccgcc atggggggag gggaggaggg tttcgcgaga cggaggtggg ggaggaagga 2340 gaggagacgc gaacggcgga ggaggagagc tggttctata gtgtcaccta aatagagctc 2400 gagctctatt taggtgacac tatagaacca ggagttgtgt aggcaatcgc tccacttgtc 2460 gcctatatac gccttggcct ctcggcgtcc gatgctagtg gtagtggccc gcaaatcctc 2520 ctcctccgct cgcgtcgccg cccaccaaac ccgatcccac cgcgccgcga tgccggccgg 2580 ccagccgcac gcgcacgagc ccgacggcgg cggcgcgagc caccgccggc cccagtcgcc 2640 gccgtcgctc cccgcggagg tggtcccggc gttcgcgccg ccggagtcgg aggacgagga 2700 gtcctgggtc tggtcccaga tcaaggccga ggcgcgccgc gacgccgacg ccgagccggc 2760 gctcgcgtcc ttcctctacg ccaccgtgct ctcccacccc tccctcccgc gctccatctc 2820 cttccacctc gccaacaagc tctgctcctc caccctcctc tccacgctcc tctacgacct 2880 cttcctggct tccttcaccg cgcacccctc cctccgcgcc gccgtcgtcg ccgacctcct 2940 cgccgcccgc tcccgcgacc cggcctgcgt cggcttctcc cagtgcctcc tcaacttcaa 3000 gggcttcctc gccatccagg cgcaccgcgt gtcgcacgtc ctctgggcgc agcagcgacg 3060 cccccttgcc ctcgccctcc agtcccgcgt cgccgacgtc ttcgccgtcg acatccaccc 3120 cgcggccgtc gtcggcaagg gcatcctcct cgaccacgcc accggcgtcg tcatcggcga 3180 gaccgccgtc gtcggcgaca acgtctccat cctccaccac gttacactgg gtggcacagg 3240 caaggctgtc ggtgaccggc accccaagat tggggatggt gttctgattg gcgccggggc 3300 gacgattctt ggcaacgtca agattggagc cggggccaag attggtgccg ggtcagtggt 3360 gctgatagat gtgccggcga ggaacacggc ggtggggaat ccagccaggt tgattggcag 3420 gaagaacggt gaggttgaga aggatgagga catgcccggg gaatccatgg atcacacatc 3480 cttcattcga cagtggtcgg actacaccat ttgagggcga cgcgccgagg tctatttctc 3540 ttcctctctg tataatccgt agtgttgata tgccaaaaac tgatgtactt gtcgtgcttt 3600 gggtaatctg tactgtagtg ttgtatcatc agccgtttta tcagtcgaat gcccatgctc 3660 atgtactgat aactggtgat tgatgaaatg atgagtcaaa taaaagttgt ataacttttg 3720 attttatcat ttgccagacg 3740 // |
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