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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK228499; SV 1; linear; mRNA; STD; PLN; 1439 BP.
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AC   AK228499;
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DT   27-JUL-2006 (Rel. 88, Created)
DT   27-JUL-2006 (Rel. 88, Last updated, Version 1)
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DE   Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone:
DE   RAFL15-14-B09.
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KW   CAP trapper; FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1439
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   ;
RL   Submitted (26-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku,
RL   Yokohama, Kanagawa 230-0045, Japan (E-mail:mseki@psc.riken.jp,
RL   URL:http://rarge.gsc.riken.jp/, Tel:81-45-503-9625, Fax:81-45-503-9586)
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RN   [2]
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs";
RL   Unpublished.
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CC   An Arabidopsis full-length cDNA library was constructed essentially
CC   as reported previously (Seki et al. (1998) Plant J. 15:707-720;
CC   Seki et al. (2002) Science 296:141-145).
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://rarge.gsc.riken.jp/) for further
CC   details.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1439
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL15-14-B09"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             122..1126
FT                   /codon_start=1
FT                   /gene="At3g55830"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q9LY62"
FT                   /db_xref="HSSP:1OMZ"
FT                   /db_xref="InterPro:IPR015338"
FT                   /db_xref="UniProtKB/TrEMBL:Q9LY62"
FT                   /protein_id="BAF00425.1"
FT                   /translation="MGGGEVSKEMGACSLAYRRGDQKLRKFVTARSTKFLLFCCIAFVL
FT                   VTIVCRSSRPWVNSSIAVADRISGSRKGYTLLMNTWKRYDLLKKSVSHYASCSRLDSIH
FT                   IVWSEPNPPSESLKEYLHNVLKKKTRDGHEVELRFDINKEDSLNNRFKEIKDLKTDAVF
FT                   SIDDDIIFPCHTVDFAFNVWESAPDTMVGFVPRVHWPEKSNDKANYYTYSGWWSVWWSG
FT                   TYSMVLSKAAFFHKKYLSLYTNSMPASIREFTTKNRNCEDIAMSFLIANATNAPAIWVK
FT                   GKIYEIGSTGISSIGGHTEKRTHCVNRFVAEFGKMPLVYTSMKAVDSRNLWFW"
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SQ   Sequence 1439 BP; 432 A; 265 C; 317 G; 425 T; 0 other;
     gactaaagaa gactgagtcg actcgctttt gacacagttg acttctgaga cgtctttctc        60
     ttcttcatct tcttcaatca tacgcttatc tatttttgga aacttgaatt cgtgatttta       120
     gatgggagga ggagaagtta gtaaagagat gggagcttgt tcattagcgt atcgtcgtgg       180
     agatcagaaa ttacgcaagt tcgtgacggc gaggagtact aagtttcttc tattttgctg       240
     catcgctttc gtcttggtca caatcgtttg ccgatcttct cgtccttggg ttaacagttc       300
     aatcgccgtc gcagatcgga tctccggatc aaggaaaggt tatacacttc tgatgaacac       360
     atggaagaga tatgatctct taaagaagtc tgtttcccac tatgcatcat gttctaggct       420
     tgactctatc cacattgtat ggagtgaacc taaccctcca tcagagtctc tgaaagagta       480
     tcttcataat gttctgaaga aaaagactcg agatgggcat gaggttgagc tgagatttga       540
     tataaacaaa gaagacagtt tgaacaacag atttaaagag attaaagact tgaaaacaga       600
     tgctgtcttc tcaatagatg atgatatcat atttccttgt cacacggtag attttgcatt       660
     caacgtttgg gaaagtgctc cggatacaat ggtggggttt gtgccccgtg tgcattggcc       720
     tgaaaaatcg aatgataaag ccaattacta cacctacagt ggatggtggt ctgtttggtg       780
     gagtggtaca tatagcatgg tactctcaaa ggcagccttc ttccacaaaa aatacctcag       840
     cctttacaca aatagcatgc cagcatcaat cagggaattc acaacaaaga acaggaactg       900
     tgaagatatt gcaatgtcat tcctcatcgc aaatgctaca aacgctcctg ctatatgggt       960
     taaaggtaaa atatatgaaa tcggttcaac tggaattagt agcataggag ggcacacaga      1020
     aaaaagaaca cactgcgtaa accggtttgt ggcagaattt gggaaaatgc cacttgtata      1080
     cacttccatg aaagccgtgg atagccgcaa tttatggttc tggtgattgc tgcttttgca      1140
     tggcagtaca tttccgctgt ctcttccact ggttactact cttcacgttc tagctatgga      1200
     cgggtttgac gccaagtaag acttaaaaac agaactgatc ttacttttac ggtaagagga      1260
     agatagagag caaaagttta taatcggtgg ctaatggggt tttctcgtag aagcttataa      1320
     agagatatag tagtagccta gtgtatgttg taccctcatt gtaccatttg taacatctgc      1380
     tgttgtgaaa atattgtttt gtgctaaaaa aaatgagtta catatattca aaaaaaaaa       1439
//
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