EBI Dbfetch

ID   AK228390; SV 1; linear; mRNA; STD; PLN; 1848 BP.
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AC   AK228390;
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DT   27-JUL-2006 (Rel. 88, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 2)
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DE   Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone:
DE   RAFL14-87-G18.
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KW   CAP trapper; FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1848
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   ;
RL   Submitted (26-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku,
RL   Yokohama, Kanagawa 230-0045, Japan (E-mail:mseki@psc.riken.jp,
RL   URL:http://rarge.gsc.riken.jp/, Tel:81-45-503-9625, Fax:81-45-503-9586)
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RN   [2]
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs";
RL   Unpublished.
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CC   An Arabidopsis full-length cDNA library was constructed essentially
CC   as reported previously (Seki et al. (1998) Plant J. 15:707-720;
CC   Seki et al. (2002) Science 296:141-145).
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://rarge.gsc.riken.jp/) for further
CC   details.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1848
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL14-87-G18"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             236..1720
FT                   /codon_start=1
FT                   /gene="At3g10320"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q9SS43"
FT                   /db_xref="InterPro:IPR007657"
FT                   /db_xref="UniProtKB/TrEMBL:Q9SS43"
FT                   /protein_id="BAF00327.1"
FT                   /translation="MRQNLKKVAQIKVDESKKLFPYVFRVKTSCGNCAKRSKPKLIYLL
FT                   IFSLISSCFVFAPQLLCFPYPSALFLIDSSIKEIENRVSESNIESPKTSQKEESISCDR
FT                   TGYRSDICFMKGDIRTHSPSSSIFLYTSNDLTTDQVLQEKIKPYTRKWETSIMETIPEL
FT                   KLVTKDMKLFGDKRKCEVIHEVPAVLFSTGGYTGNLYHEFNDGLIPLYITSKRFNKKVV
FT                   FVIAEYHKWWEMKYGDVLSQLSDYSLIDFNKDKRTHCFKEAIVGLRIHGELTVDPSQMQ
FT                   DDGTTINEFRNVLDRAYRPRINRLDRLEEQRFHARLAQRRKAKRPKLALFSRTGSRGIT
FT                   NEDLMVKMAQRIGFDIEVLRPDRTTELAKIYRVLNSSKVMVGVHGAAMTHFLFMKPGSI
FT                   FIQIIPLGTDWAAETYYGEPAKKLGLDYNGYKILPRESSLYEKYDKDDPILKDPNSITK
FT                   KGWQFTKGIYLNDQKVRLDLHRFKKLLIDAYAKSIR"
FT   misc_difference 1327
FT                   /replace="a"
FT                   /note="compared to genomic sequence"
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SQ   Sequence 1848 BP; 591 A; 384 C; 361 G; 512 T; 0 other;
     ctctctaaat aaatactctg atttcaaagc taaaacttac aacaacaccc acaaaacttc        60
     tctctcttat ctcgtctact tgatctctct actctctttc ctctctagct acttctctcc       120
     cttacgtctc caaggagata gattgacaaa ttctgttcac aaaggaaaaa agttcctctg       180
     catacgtctc tctctctatg ttcttcattt atatgacttg aataacaagt aaaggatgag       240
     gcagaatctg aaaaaagtag cacagatcaa agtagacgaa tctaagaagc tatttcctta       300
     tgtcttccgg gttaaaactt cttgtgggaa ttgcgctaag agatcgaagc ctaagcttat       360
     ctatcttctt atcttctctc ttatctcaag ttgctttgtc tttgctcctc agctcctctg       420
     tttcccttac ccctctgctc tgtttctcat cgattcttca attaaagaga ttgaaaatcg       480
     ggtttccgaa agcaatatag aatcacctaa gacgtcacaa aaagaagaga gcatatcttg       540
     tgacagaacc ggctatcgtt cagacatctg tttcatgaaa ggcgatatca gaacacactc       600
     tccttcctcc tccatctttc tctacacctc gaatgatctc accaccgatc aggtcttgca       660
     agaaaaaatc aaaccataca ccagaaaatg ggaaactagt ataatggaaa ccatccctga       720
     gctcaaactt gtgacaaaag atatgaagct ttttggcgac aagcgtaaat gcgaagtgat       780
     ccatgaagta ccggccgtgc tattctctac cggaggatat accggaaacc tctatcatga       840
     gttcaacgac gggcttattc ctttgtatat aacatctaaa cgtttcaaca aaaaggttgt       900
     ctttgtgatt gctgagtatc acaagtggtg ggagatgaag tatggagatg ttctctctca       960
     gctctctgat tactctctta tcgacttcaa caaagacaag agaactcact gcttcaagga      1020
     agctattgtt ggtcttagaa tccatggtga gttaaccgtc gatccttctc agatgcaaga      1080
     tgatggaaca accatcaatg agttcagaaa tgtacttgat cgagcttata gaccacgaat      1140
     caacagactg gacaggctag aggagcaacg attccacgca agactagcac agagaagaaa      1200
     ggctaagagg ccaaaactag cgttgttttc aagaaccggg tctcgaggga taacaaacga      1260
     ggacctgatg gtgaaaatgg ctcagaggat cgggtttgac atcgaggttt tgagacctga      1320
     cagaacgacg gaactggcaa agatttacag agtgttaaac tcaagcaaag tcatggttgg      1380
     ggtacatgga gcagccatga cccattttct gttcatgaaa cctggaagta tctttattca      1440
     gatcattcca ctgggaacag attgggcagc agagacatat tatggagaac cggcaaagaa      1500
     gctcggtcta gactacaatg gttataagat tcttccaaga gagagctcat tgtatgaaaa      1560
     atatgataaa gatgatccaa ttctaaaaga tccaaacagc atcactaaga aaggatggca      1620
     attcacaaag gggatatacc tgaacgacca gaaagtgagg ttagatctcc atagattcaa      1680
     gaagcttttg attgatgcgt atgcaaaatc gattaggtga cctgaaatga gttttgagag      1740
     ttctttttat tgttgctgta tagtctgcat aaactacaga aattacagag ttctttttgt      1800
     aaagatttaa atgaaaccat aaatgaattc aatgtttcag agactaaa                   1848
//