spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK228207; SV 1; linear; mRNA; STD; PLN; 1079 BP.
XX
AC   AK228207;
XX
DT   27-JUL-2006 (Rel. 88, Created)
DT   27-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds,
DE   clone: RAFL14-65-O21.
XX
KW   CAP trapper; FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1079
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   ;
RL   Submitted (26-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku,
RL   Yokohama, Kanagawa 230-0045, Japan (E-mail:mseki@psc.riken.jp,
RL   URL:http://rarge.gsc.riken.jp/, Tel:81-45-503-9625, Fax:81-45-503-9586)
XX
RN   [2]
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs";
RL   Unpublished.
XX
CC   An Arabidopsis full-length cDNA library was constructed essentially
CC   as reported previously (Seki et al. (1998) Plant J. 15:707-720;
CC   Seki et al. (2002) Science 296:141-145).
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://rarge.gsc.riken.jp/) for further
CC   details.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1079
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL14-65-O21"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             188..781
FT                   /codon_start=1
FT                   /gene="At1g26450"
FT                   /product="predicted GPI-anchored protein"
FT                   /db_xref="GOA:Q9FZD0"
FT                   /db_xref="InterPro:IPR012946"
FT                   /db_xref="UniProtKB/TrEMBL:Q9FZD0"
FT                   /protein_id="BAF00161.1"
FT                   /translation="MAVLLPLFLLSFMFTYSNAAVCVCKDANELDLQKVIDFACGGGAD
FT                   CAQIQTTGACYQPNTLKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCLS
FT                   SSSSNGTPTAGYPSTGNSTTASPGTTNPSTGNSTNSTLPTNDKPTSSTITFPDSTTMGP
FT                   SSSTSGDPNGGEELSVRTTTIILLTTIAAVALRV"
XX
SQ   Sequence 1079 BP; 303 A; 259 C; 198 G; 319 T; 0 other;
     aataatatct gaacttttct ttacttaagc cttagggtat tctgcttatt agtacccaag        60
     aaatatcata aagagtataa attgtcgatc atcatatcag aataatctcc tctctctcta       120
     acaaactcgc aaactcacat ttgtggtact ctcagtgtta gacaagtccg atcaagttta       180
     agcagtcatg gcggttttgc ttcctctgtt tcttctctct ttcatgttta cctattcaaa       240
     cgcggcggtt tgtgtgtgca aggacgctaa cgagctggat cttcagaagg tgatagactt       300
     cgcatgtgga ggaggtgctg actgtgcaca gattcagacg accggagctt gttatcaacc       360
     aaacaccctc aagaaccact gtgacgttgc cgttaacagc tactatcaaa agaaagcttc       420
     caccggtgcc acatgtgact tcaacggcgc cgccgtcatc tccacttccc ctccttcgac       480
     tacgtcaagc tgtttatcta gttctagttc caacggaacc cccactgccg gatatccatc       540
     caccggaaat tcaaccacag caagtccagg caccacaaat ccatccacag gcaattcaac       600
     aaacagcaca ctacccacta atgataagcc gacttcatct acgataacgt ttcctgacag       660
     tactactatg ggaccatcta gcagcacgag tggtgatccc aacggtggag aagagctatc       720
     cgtcagaacc acgacgatca tcttactgac taccatcgct gccgtggcat tgagggttta       780
     ggtaagatca tctcaagatg atgacgagga cgcttatttg ttgtggacgg ctgagataat       840
     gccaagttaa ttagagccta tctttcttcc caccgaattt taatctttaa tttccaatta       900
     ggattgtgac tctcgctcgt cttcttaagt attttggttt atagaaaatc ttaatcaaga       960
     gcttttttct tgctttcttt tgtaaatcca gaaaaaatga gatgctcttt gggttgtatt      1020
     atttttactt ataattatgc cttcgccaat aaagataaca tgtttctcta aaaaaaaaa       1079
//
spacer
spacer