spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK227750; SV 1; linear; mRNA; STD; PLN; 1693 BP.
XX
AC   AK227750;
XX
DT   27-JUL-2006 (Rel. 88, Created)
DT   27-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Arabidopsis thaliana mRNA for alpha galactosyltransferase protein, complete
DE   cds, clone: RAFL14-32-M02.
XX
KW   CAP trapper; FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1693
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   ;
RL   Submitted (26-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku,
RL   Yokohama, Kanagawa 230-0045, Japan (E-mail:mseki@psc.riken.jp,
RL   URL:http://rarge.gsc.riken.jp/, Tel:81-45-503-9625, Fax:81-45-503-9586)
XX
RN   [2]
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs";
RL   Unpublished.
XX
CC   An Arabidopsis full-length cDNA library was constructed essentially
CC   as reported previously (Seki et al. (1998) Plant J. 15:707-720;
CC   Seki et al. (2002) Science 296:141-145).
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://rarge.gsc.riken.jp/) for further
CC   details.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1693
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL14-32-M02"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             124..1497
FT                   /codon_start=1
FT                   /gene="At5g07720"
FT                   /product="alpha galactosyltransferase protein"
FT                   /db_xref="GOA:Q0WT14"
FT                   /db_xref="InterPro:IPR008630"
FT                   /db_xref="UniProtKB/TrEMBL:Q0WT14"
FT                   /protein_id="BAE99734.1"
FT                   /translation="MGKEDGFRTQKRVSTASSAAAGVLPTTMASGGVRRPPPRGRQIQK
FT                   TFNNVKMTILCGFVTILVLRGTIGINFGTSDADVVNQNIIEETNRLLAEIRSDSDPTDS
FT                   NEPPDSDLDLNMTYTLGPKITNWDQKRKLWLTQNPDFPSFINGKAKVLLLTGSPPKPCD
FT                   NPIGDHYLLKSVKNKIDYCRIHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEIEW
FT                   IWWMDSDALFTDMVFEIPLSRYENHNLVIHGYPDLLFDQKSWIALNTGSFLFRNCQWSL
FT                   DLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSQKETWMEKVFVE
FT                   NQYYLHGFWEGLVDKYEEMMEKYHPGLGDERWPFITHFVGCKPCGSYADYAVERCLKSM
FT                   ERAFNFADNQVLKLYGFGHRGLLSPKIKRIRNETTFPLKFVDRFDIRRTTPLKIEARS"
XX
SQ   Sequence 1693 BP; 494 A; 336 C; 385 G; 478 T; 0 other;
     gttcattgtc cgcttcctct ctcttttatc tcacagacaa aacaagtaaa caacaacaac        60
     aacaacatta caacaacaac aatggctctt tgatcaaact gttttatcca agttacaaca       120
     aaaatgggaa aggaggacgg tttcaggact cagaagcgcg tatcaacagc ttcctccgcc       180
     gccgccggcg ttcttccgac gacgatggcg agtggtggag taaggagacc accaccacgt       240
     ggtagacaga tccaaaagac gttcaacaac gtgaaaatga caatcctttg tggcttcgtc       300
     accatcctcg tcctacgtgg cactatcggc attaacttcg gaacttccga cgccgacgtc       360
     gtaaaccaga acattatcga agagactaac cgacttctag ctgagatccg atccgattcg       420
     gatcctaccg actcaaacga gccacctgat tcggatcttg acctcaacat gacgtacact       480
     ctcggaccca agatcactaa ctgggatcaa aaacggaaac tttggttaac gcaaaaccca       540
     gatttcccca gtttcatcaa tggtaaagct aaggttttgc ttttaacagg ttcgcctcca       600
     aaaccttgtg acaaccctat tggtgatcat tacctgctga aatcggtgaa gaacaagatt       660
     gattattgta ggattcatgg gattgagatt gtgtataaca tggctcattt agacaaggag       720
     cttgctgggt attgggcaaa gcttccaatg atcaggagat tgatgttgtc tcatcctgaa       780
     attgaatgga tttggtggat ggacagtgat gctttgttca ctgacatggt gtttgagatt       840
     cctttgtcta gatatgagaa ccataacttg gttattcatg gatatcctga tttgttgttt       900
     gatcagaagt cttggattgc tttgaatact ggtagcttct tgtttaggaa ctgtcaatgg       960
     tctttggatt tgttggatgc ttgggctcca atgggaccta aaggacctat tcgggaagaa      1020
     gctgggaaga ttctcaccgc gaatcttaaa ggaagaccgg ctttcgaagc ggatgatcag      1080
     tctgcattga tctatctgct gctttcgcag aaggagacgt ggatggagaa agtgtttgtg      1140
     gagaatcagt actatcttca tgggttttgg gaaggtttag tggataagta tgaggagatg      1200
     atggagaagt accatcccgg tttgggagat gaaagatggc cttttattac tcactttgtt      1260
     ggatgcaaac cgtgtgggag ttatgctgat tacgcggttg aacgttgctt gaagagtatg      1320
     gagcgagcat tcaactttgc ggataatcaa gtgctcaaac tgtatgggtt tggtcacagg      1380
     ggattgttaa gtcctaagat caagaggatc agaaacgaga caacatttcc attgaaattc      1440
     gtagacaggt ttgatattcg gagaacaaca ccgctcaaga ttgaagcacg aagctagcag      1500
     ctgatgaacc agtttcagtt tggtaaagca caatcagttc ctacttaact gaacaaaatg      1560
     ctacattgtt tcaaagctca cttctctttc ttatattttt acccaatata taaagtcaat      1620
     atattctttt gttaaacttg aacagaagat gaattatcaa tttgttcaag tacctttcaa      1680
     tgcaaaaaaa aaa                                                         1693
//
spacer
spacer