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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK227385; SV 1; linear; mRNA; STD; PLN; 2236 BP.
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AC   AK227385;
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DT   27-JUL-2006 (Rel. 88, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 2)
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DE   Arabidopsis thaliana mRNA for putative methyltransferase, clone:
DE   RAFL14-05-E09.
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KW   CAP trapper; FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-2236
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   ;
RL   Submitted (26-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku,
RL   Yokohama, Kanagawa 230-0045, Japan (E-mail:mseki@psc.riken.jp,
RL   URL:http://rarge.gsc.riken.jp/, Tel:81-45-503-9625, Fax:81-45-503-9586)
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RN   [2]
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs";
RL   Unpublished.
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DR   GOA; O82486.
DR   InterPro; IPR007757; MT-A70.
DR   UniProtKB/Swiss-Prot; O82486; MTA70_ARATH.
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CC   An Arabidopsis full-length cDNA library was constructed essentially
CC   as reported previously (Seki et al. (1998) Plant J. 15:707-720;
CC   Seki et al. (2002) Science 296:141-145).
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://rarge.gsc.riken.jp/) for further
CC   details.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2236
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL14-05-E09"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   misc_feature    40..2096
FT                   /gene="At4g10760"
FT                   /product="putative methyltransferase"
FT                   /note="frame shift"
FT   misc_difference 656^657
FT                   /replace="t"
FT                   /note="compared to genomic sequence"
FT   misc_difference 2167
FT                   /replace="a"
FT                   /note="compared to genomic sequence"
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SQ   Sequence 2236 BP; 646 A; 453 C; 543 G; 594 T; 0 other;
     ctgcacaaac tctctctcga attcttttgt ttcgaagcca tggaaactga atctgatgac        60
     gccaccatta ccgtcgtcaa agacatgaga gttcgattag agaatcgaat tcgaacccaa       120
     cacgacgctc acttagatct cctttcctca ctccaatcca ttgttcccga tatagtccca       180
     tctctcgatc tctcactcaa actcatctct tctttcacga atcgaccttt cgtagctaca       240
     ccaccattac cagaacccaa agttgagaag aagcatcatc cgattgttaa attaggaacc       300
     caactgcaac aattacatgg gcatgattca aaatcgatgc ttgttgattc gaatcagaga       360
     gatgctgaag ctgatgggtc tagtgggagt cctatggcgc ttgttagagc tatggttgct       420
     gagtgtttgc ttcaacgtgt accgttttct cctacggatt cttctactgt gcttaggaag       480
     cttgagaatg accagaatgc tagaccggcg gagaaggcgg cgttacgaga tttaggcggt       540
     gaatgtggac cgattcttgc ggtggagacc gcacttaaat cgatggcgga agagaatggt       600
     tctgtggaat tggaagagtt tgaggttagt gggaagccta ggatcatggt tttagcatag       660
     atagaactag attgcttaaa gagttaccag agagtttcca agggaataac gaatcgaatc       720
     gggttgtcga aacgcctaat tcaattgaga atgctactgt ttctggtggc gggtttggtg       780
     tttccgggtc gggtaatttc ccgagacctg agatgtgggg aggtgatcct aatatggggt       840
     ttaggccaat gatgaatgca ccaagaggaa tgcaaatgat gggaatgcat catccaatgg       900
     ggataatggg tagaccacca ccatttcctt tgcctttgcc gttgcctgta ccgtcgaatc       960
     agaagcttag aagtgaggaa gaggatttga aagatgttga ggctcttttg agtaagaagt      1020
     cttttaagga gaagcaacag tctaggacag gtgaggagtt gcttgatctg attcaccgtc      1080
     caaccgctaa agaagccgct actgctgcta agtttaaaag caaaggagga tcacaggtta      1140
     agtattactg taggtattta actaaagagg attgccgtct tcagtctggt tctcacatag      1200
     cctgcaacaa gagacatttc cgtcgactaa tcgcttcaca tactgacgtt agcctaggag      1260
     attgttcctt tctcgatact tgtcgtcaca tgaagacttg caaatacgtg cattacgagc      1320
     tcgacatggc tgacgctatg atggctggtc cagataaggc attgaagcct ctacgtgctg      1380
     attactgttc tgaagctgaa cttggtgagg cacaatggat taactgtgac atccgttctt      1440
     ttcgaatgga cattttggga acctttggag ttgttatggc ggatccacca tgggacattc      1500
     acatggaact tccatatgga acaatggctg atgacgaaat gcgaactctt aatgttccct      1560
     cgttacagac tgacggtttg attttcctct gggtcactgg tcgtgctatg gaactaggcc      1620
     gtgaatgttt ggagctttgg ggatacaagc gagtggaaga gatcatatgg gtaaagacaa      1680
     atcaacttca acgtattatt cgaacaggaa gaacaggtca ctggctcaac catagcaaag      1740
     agcattgtct ggttggaatc aaaggaaatc cagaagtgaa cagaaacatc gacacagatg      1800
     tgattgtcgc agaggttaga gaaacaagcc ggaagccaga cgagatgtat gcaatgttag      1860
     agaggatcat gccaagagca agaaagctcg agttattcgc ccgtatgcac aatgctcatg      1920
     ccggatggct atcacttggg aaccagctta acggtgtccg attaataaac gaaggtcttc      1980
     gagctcggtt taaagcatca taccctgaaa tagatgtcca gccaccatca ccaccaagag      2040
     cctctgcaat ggaaacagac aacgaaccaa tggctattga ctcaatcaca gcttagttca      2100
     attccaaaaa aaacaaagcc aaatgtctca gctttgttgg attcatgttg ctttcgtttt      2160
     tgaaacgttt gtggcatcat gattttgtaa atctttatgg aaagttaaaa ggaaacaaca      2220
     ttaacgaaaa aaaaaa                                                      2236
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