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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK226493; SV 1; linear; mRNA; STD; PLN; 1627 BP.
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AC   AK226493;
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DT   27-JUL-2006 (Rel. 88, Created)
DT   27-JUL-2006 (Rel. 88, Last updated, Version 1)
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DE   Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone:
DE   RAFL06-80-J21.
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KW   CAP trapper; FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1627
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   ;
RL   Submitted (26-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku,
RL   Yokohama, Kanagawa 230-0045, Japan (E-mail:mseki@psc.riken.jp,
RL   URL:http://rarge.gsc.riken.jp/, Tel:81-45-503-9625, Fax:81-45-503-9586)
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RN   [2]
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs";
RL   Unpublished.
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CC   An Arabidopsis full-length cDNA library was constructed essentially
CC   as reported previously (Seki et al. (1998) Plant J. 15:707-720;
CC   Seki et al. (2002) Science 296:141-145).
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://rarge.gsc.riken.jp/) for further
CC   details.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1627
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL06-80-J21"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             284..1456
FT                   /codon_start=1
FT                   /gene="At1g67880"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q9C9V4"
FT                   /db_xref="InterPro:IPR006813"
FT                   /db_xref="UniProtKB/TrEMBL:Q9C9V4"
FT                   /protein_id="BAE98635.1"
FT                   /translation="MWWMMGENGGHYCSKKSDDLCGTQESDRGFGISRLCCILRGVDLK
FT                   SVLFLLVIMPMCVLGVYINALKISYFLRPLWESPPKPFHEIPHYHHENASMESLCKLHG
FT                   WRTREYPRRVYDAVLFSTEVELLTIRWKELYPYVTQFVLLESNSTFTGLPKPLVFAGHR
FT                   DEFKFIEPRLTYGSIGGRFKKGEKNPFYEEAYQRIALDQLLRIAGITDDDLLIMSDVDE
FT                   IPSRHTINLLRWCDDIPQILHLRLKNYLYSFEFPVDDKSWRASVHRYQTGKTRYAHYRQ
FT                   SDVILADSGWHCSFCFRRISEFVFKMKAYSHYDRVRFAHYLNPKRVQRVICSGSDLFDM
FT                   IPEEYTFKDIIGKMGPIPHSYSAVHLPAYLLENAERYKFLLPGNCLRDEE"
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SQ   Sequence 1627 BP; 442 A; 291 C; 344 G; 550 T; 0 other;
     gaacgttgaa actttcctca ttgacctaat tacccctttt ctctcttgtt agttcctcga        60
     gacaatatcc atttatcatc atagacacaa tcacataaaa aaaaaaacct ctgtttttgc       120
     tctgtttatt ctttaattct ttcaaaatct ccccttttta ggcttggatt ctttaattcg       180
     tgtgtttttt ctatctcttg ttgaaaccaa tctctaagat tctgtttatt tgtggtaaag       240
     tttggttctt tatatctcaa atcgagttct tgttcgaaga aagatgtggt ggatgatggg       300
     agaaaacggt ggtcactact gttctaaaaa gtccgatgat ttatgcggaa ctcaggaatc       360
     agatcgaggc tttggtattt caagactctg ttgtatcttg cgtggtgtgg atttaaaatc       420
     ggttctgttt ctgttagtaa tcatgccaat gtgtgttctt ggtgtataca ttaacgctct       480
     caagatttca tatttcttga gacctttatg ggaatcacca ccaaaaccat tccatgagat       540
     accgcattat caccacgaga acgcttctat ggaatctctc tgtaaactcc acggttggag       600
     aacccgtgag taccctcgtc gtgtctacga cgctgttttg ttcagtactg aagttgaact       660
     cctcacgata cggtggaaag aactgtaccc atatgttact cagtttgttc tacttgaatc       720
     taactcgact ttcaccggat taccaaaacc gcttgttttc gcggggcata gggatgagtt       780
     taagtttatc gagccacggt tgacttacgg gtcgatagga ggaaggttta agaaaggtga       840
     gaagaatcct ttttacgaag aggcttatca aagaatcgca ttggatcagc tattgagaat       900
     agctggtatc actgatgatg acttgttgat tatgtctgat gttgatgaga ttccgagtag       960
     acatacgata aatcttctcc gttggtgcga tgacatacca caaattcttc atcttagact      1020
     gaagaattac ttgtactctt ttgagttccc tgttgatgat aagagctgga gagcatcggt      1080
     gcatagatac cagacgggta aaacaaggta tgcgcattat cgacagtctg atgttatctt      1140
     ggcggattca gggtggcatt gcagtttctg ttttagacgt ataagcgagt ttgtgtttaa      1200
     gatgaaagct tatagtcatt atgatcgagt gagattcgcg cattacttga acccgaaaag      1260
     ggttcaaaga gttatatgca gcggatcgga tttgttcgat atgattcccg aggaatacac      1320
     gtttaaagac atcattggta aaatgggacc gatcccgcat tcttactccg cggttcatct      1380
     tccggcgtac cttttagaga acgcggagag gtacaagttt cttcttccgg ggaactgttt      1440
     gagagatgag gaatgaattg gttattgtaa ctaatatgat atggaacact actactacta      1500
     ctaactcaag attattaatt ctttggtgag ttattttttg aaagagttta tggcgatttt      1560
     attggtcact ttcgtgtaca tatacaattt aatttatatt tttatctctt tgggatcaaa      1620
     aaaaaaa                                                                1627
//
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