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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK226201; SV 1; linear; mRNA; STD; PLN; 1019 BP.
XX
AC   AK226201;
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DT   27-JUL-2006 (Rel. 88, Created)
DT   27-JUL-2006 (Rel. 88, Last updated, Version 1)
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DE   Arabidopsis thaliana mRNA for putative endochitinase, complete cds, clone:
DE   RAFL04-12-G16.
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KW   CAP trapper; FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1019
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   ;
RL   Submitted (26-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku,
RL   Yokohama, Kanagawa 230-0045, Japan (E-mail:mseki@psc.riken.jp,
RL   URL:http://rarge.gsc.riken.jp/, Tel:81-45-503-9625, Fax:81-45-503-9586)
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RN   [2]
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs";
RL   Unpublished.
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CC   An Arabidopsis full-length cDNA library was constructed essentially
CC   as reported previously (Seki et al. (1998) Plant J. 15:707-720;
CC   Seki et al. (2002) Science 296:141-145).
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://rarge.gsc.riken.jp/) for further
CC   details.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1019
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="2"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL04-12-G16"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             30..863
FT                   /codon_start=1
FT                   /gene="At2g43570"
FT                   /product="putative endochitinase"
FT                   /db_xref="GOA:O24603"
FT                   /db_xref="HSSP:2BAA"
FT                   /db_xref="InterPro:IPR018371"
FT                   /db_xref="UniProtKB/TrEMBL:O24603"
FT                   /protein_id="BAE98366.1"
FT                   /translation="MAKPTSRNDRFALFFITLIFLILTVSKPVASQNCGCASDFCCSKY
FT                   GYCGTTDEFCGEGCQAGPCRSSGGGGDPAVSLEGTVTPDFFNSILNQRGDCPGKGFYTH
FT                   DTFMAAANSYPSFGASISKREIAAFFAHVAQETGFMCYIEEIDGPAKAASGEYCDTEKP
FT                   EFPCAQGKGYYGRGAIQLSWNYNYGLCGKALDENLLASPEKVAQDQVLAFKTAFWFWTT
FT                   NVRTSFKSGFGATIRAVNSRECSGGDSTAKAANRIKYFQDYCGKLGVAPGDNLTC"
XX
SQ   Sequence 1019 BP; 293 A; 240 C; 229 G; 257 T; 0 other;
     tggcagtctg catcacagac acaaaaacaa tggctaaacc cacatcacga aatgaccgat        60
     ttgccctttt cttcataacc ctaattttcc tgatcctaac cgtttccaaa ccggtcgcct       120
     ctcaaaactg tggctgcgcc tctgacttct gttgcagcaa atatggctac tgtggtacga       180
     ccgatgagtt ctgcggcgag ggctgccagg caggaccttg ccggagcagt ggaggcggtg       240
     gagatcctgc tgtttcacta gaaggaacgg tgacacctga cttctttaac tctatactaa       300
     accaaagagg tgattgtcct ggcaaaggat tctacactca cgacaccttc atggccgcag       360
     ctaattctta ccctagcttc ggtgcttcca tctccaaacg cgaaatcgcg gcgtttttcg       420
     ctcacgtagc ccaagaaaca gggttcatgt gttacattga ggaaattgat ggaccagcca       480
     aggccgcatc cggagagtac tgcgacacag agaaaccaga gttcccatgt gcacaaggaa       540
     agggctacta tggccgtggt gcaatccagc tctcttggaa ctacaactac ggtctctgtg       600
     gcaaagcctt ggacgagaac ttattggctt caccagagaa agttgctcaa gaccaggttc       660
     ttgccttcaa gaccgctttc tggttctgga ccactaatgt tcgcacgagt tttaaatcgg       720
     gctttggcgc aacaatcagg gcagtgaata gtagggagtg tagcggagga gattctacag       780
     ccaaagccgc caacaggatt aagtatttcc aagactattg tggcaagctt ggagttgcac       840
     ctggagataa cctcacttgt taaagtttcc ttgctatcca tccgaaacac aactagtgtt       900
     tgaaaaactt agagatcaca taagagaaag tatcatatta gtataataat gttgtaatac       960
     ttcacatttt accaaaaata ataataataa tgttgtaata gctagtgtta aaaaaaaaa       1019
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