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EBI DbfetchID AK120536; SV 1; linear; mRNA; STD; PLN; 2063 BP. XX AC AK120536; XX DT 25-OCT-2003 (Rel. 77, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Oryza sativa Japonica Group cDNA clone:J013129B17, full insert sequence. XX KW CAP trapper; FLI_CDNA. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-2063 RA Kikuchi S.; RT ; RL Submitted (31-JAN-2003) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Department of Molecular Genetics, Head of Laboratory of Gene Expression; RL 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan XX RN [2] RA Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K., RA Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I., RA Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y., RA Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N., RA Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakahama Y., Nakamura M., Namiki T., RA Narikawa R., Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., RA Ohno M., Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., RA Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., RA Satoh K., Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., RA Sugano S., Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., RA Tagawa A., Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., RA Tsunoda Y., Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., RA Yasunishi A., Yazaki J., Yokomizo S., Yoshimura A.; RT "Collection, mapping, and annotation of 28K full-length cDNA clones from RT japonica rice"; RL Unpublished. XX RN [3] RA Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., RA Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., RA Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y., RA Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., RA Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., RA Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., RA Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., RA Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., RA Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., RA Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., RA Yoshino M., Hayashizaki Y.; RT "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from RT japonica Rice"; RL Science 301:376-379(2003). XX DR GOA; Q67UW5. DR HSSP; 1TF4; P26221. DR InterPro; IPR001701; Glyco_hydro_9. DR InterPro; IPR008928; 6-hairpin_glycosidase-like. DR InterPro; IPR012341; 6hp_glycosidase. DR UniProtKB/Swiss-Prot; Q67UW5; GUN5_ORYSJ. XX CC This clone is one of the 32K full-length cDNA clones from CC japonica rice. CC URL : http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., CC Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., CC Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., CC Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., CC Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., CC Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., CC Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., CC Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., CC Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., CC Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences CC Center and Genome Science Laboratory in Riken: Adachi,J., CC Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., CC Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., CC Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., CC Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., CC Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., CC Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., CC Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., CC Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., CC Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., CC Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., CC Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..2063 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="J013129B17" FT /db_xref="taxon:39947" FT misc_feature 1..2063 FT /note="(RAP Annotation release2) Similar to Cellulase FT (Fragment)" FT /note="(Rice Genome Annotation Project) endoglucanase 1 FT precursor, putative, expressed" FT /note="mapping to R02-TIGRv4S1-000169R (Chr.2: short FT arm=2824485, long arm=2830255, direction=reverse) for TIGR FT Pseudomol ver4" XX SQ Sequence 2063 BP; 365 A; 625 C; 674 G; 397 T; 2 other; ggtctgtgtg tgttcatcag tgatcagtag tgttcttgtt cttgttcatt ggcagctgga 60 ggttcttgtt catttgcctt agctggaagt gattaaatca gtagccattg ttgtttagtg 120 gcgccattaa tcttcagtta tcagtttcca ttccgggaga tcaggcggtg gtcagctggc 180 acctgcatgc atatgcaggc tcattgattg attcgatttt gggaagagag ttattagtga 240 tcgatcttgg ctggatcgat tgagcttgat catccggtgg tgatatttct ggattcttgt 300 atatttgtga ggggtgtgag ctgtttgatc gatgtgctgt ggttgggcgg cggcgtagga 360 tgagcgacgt ctccggccgc ttcgtggtgg ccgcggccgt ggtcgccgtg tcgctggcca 420 tggcggcggc ggcggcggcg cacgactacg gcgaggcgct gtcgaagagc ctgctctact 480 tcgaggcgca gcggtcgggc cgcctgccgt acaaccagcg cgtgcggtgg cgcggccact 540 ccggcctcac cgacggcctc gagcaagggg tggacctggt gggcgggtac tacgacgccg 600 gcgaccacgt caagttcggg ctgcccatgg cgttcaccgt cacgatgctg tcgtggagcg 660 tgctggagta cggcgaggag atcgccgccg ccggcgagct cggccacgcc ctccacgcca 720 tcaaatgggg caccgattac ttcatcaagg cgcacaccca ccccaacgtc ctctggactc 780 aggtcggcga cggcgactcg gaccactact gctggcagcg gccggaggac atgacgacgt 840 cgcggcacgc gtacaaggtg gacgccgaga accccgggtc ggaggtcgcc gcagagaccg 900 ccgccgccat ggccgccgca tccatcgtct tccgccgcgc cggcgacgcc cactacgccc 960 atctcctcct ccaccacgct cagcagttgt ttgagtttgg ggacaagtac agggggagat 1020 acgacgagag tgtggaggtg gtaaagaact actacccatc atcaagtggg tacaaggatg 1080 agctgctgtg ggcggcgctg tggctgcacc gtgccaccgg ccgccgcgaa tacctcgact 1140 acgccgtcga caacgccgac gacttcggcg gcaccggctg ggccgtctcc gagttcagct 1200 gggacatcaa gtacgccgga ctccaagtcc tcgcttccaa gctgctggta gaggagaagc 1260 atctgagctc gcagcagcgc gaggtgctgg agaagtacag gtcaaaggcg gagtactacg 1320 tgtgctcctg catgggccgc aaccccggcg gcgccgccca caacgccggc cgcactccgg 1380 cgggcctcct cttcatccgc ccgtggaacc aacctccagt acgtctccac gccgccttcc 1440 tcctcaccgt ctaatccgan gtcctctcct acctctccct ccccctcctc tgcccggacc 1500 ccgacgccgc cgccgacgag gccgntcctg cgggggcgga cgccggcgag gtgctggagt 1560 tcgcgaggtc gcaggcggat tacatactgg ggacgaaccc gatggcgacg agctacctcg 1620 tcgggtacgg cgaggcgtac ccgcggcggg tgcaccaccg cgcggcgtcg agcgcgtcgt 1680 acgcgcgcga ccgcgacttc atcgggtgcc tccaggggtt cgactcgtgg tacagcgcgg 1740 cggcggagaa cccgcacgac ctcgtcggcg ccgtcgtcgg cgggcccaac ggcaacgacg 1800 tgttcaccga ccaccgcggc gcgtacatgc agacggaggc ctgcacgtac aacacggcgc 1860 ccatggtcgg cgtcttctcc aggctcatgg agctcgagcg gcggcggcgc ggggaagacg 1920 cgccgccgtc gtcgacgtcg ccggtggcgg aggatgatct gtagtagatg ttgtataagt 1980 taggagatga gagaatttat atgaccccct ctgattggtg aatggtgata ataataaaaa 2040 aaatgaaaaa agggaaattt tat 2063 // |
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