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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK118429; SV 1; linear; mRNA; STD; PLN; 590 BP.
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AC   AK118429;
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DT   13-DEC-2002 (Rel. 74, Created)
DT   14-FEB-2004 (Rel. 78, Last updated, Version 2)
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DE   Arabidopsis thaliana At5g63230 mRNA for unknown protein, complete cds,
DE   clone: RAFL19-67-M14.
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KW   CAP trapper; FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-590
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   ;
RL   Submitted (25-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Genomic Sciences Center; 1-7-22 Suehiro-cho,
RL   Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
RL   (E-mail:mseki@gsc.riken.go.jp, URL:http://pfgweb.gsc.riken.go.jp,
RL   Tel:81-45-503-9625, Fax:81-45-503-9586)
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RN   [2]
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Arabidopsis thaliana full-length cDNA";
RL   Unpublished.
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CC   An Arabidopsis full-length cDNA library was constructed
CC   essentially as reported previously (Seki et al. (1998) Plant
CC   J. 15:707-720; Seki et al. (2002) Science 296:141-145).
CC   cDNA cleaved with BamHI and XhoI was ligated to modified
CC   Lambda FLC-1-E vector (Carninci et al. (2001) Genomics
CC   77:79-90) digested with BamHI and SalI.
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://pfgweb.gsc.riken.go.jp/)
CC   for further details.
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FH   Key             Location/Qualifiers
FH
FT   source          1..590
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL19-67-M14"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             55..387
FT                   /codon_start=1
FT                   /gene="At5g63230/MDC12_20"
FT                   /product="unknown protein"
FT                   /db_xref="InterPro:IPR012946"
FT                   /db_xref="UniProtKB/TrEMBL:Q8GX54"
FT                   /protein_id="BAC43038.1"
FT                   /translation="MSSQLLTLFLLLSAVAIPVVTSRQWCMAMPNATGEQLQANIDYAC
FT                   SQNVDCTPIQPGGTCYEPNTLLDHASFAMNAYYQSHGRIEDACRFGRTGCFVFIDPSNG
FT                   SCIYYT"
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SQ   Sequence 590 BP; 170 A; 104 C; 112 G; 204 T; 0 other;
     atacataacc taagattctt acaaacacat taagatttct tgatttctca ttcaatgtca        60
     tcgcagcttt taacgctctt tcttcttcta tctgctgttg cgatccctgt cgtgactagc       120
     agacaatggt gcatggccat gccgaatgcc acaggagaac aattacaagc taatattgat       180
     tatgcttgta gccagaatgt tgattgtaca ccgatccaac caggtggaac ttgctatgaa       240
     cctaacacgt tattagacca tgcgtcgttt gccatgaacg catattatca aagccatggt       300
     cgtatcgaag atgcttgtag gttcggccgt actggttgtt ttgttttcat cgacccaagt       360
     aatggttcat gtatctacta cacttaaaaa taagtatgtt tatggattgc gttacgtact       420
     aattattaat ttccggatag cttttgtttt ttataatatt cggatgttgt atccccaaac       480
     taaagatatt tcaatataat ggatgttcaa tgctcgtagt gatctgatat atattattgt       540
     aatgtgatta ttaaggcatg agaatttgag atggttgtgg aataaaaaag                  590
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