spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK118321; SV 1; linear; mRNA; STD; PLN; 916 BP.
XX
AC   AK118321;
XX
DT   13-DEC-2002 (Rel. 74, Created)
DT   14-FEB-2004 (Rel. 78, Last updated, Version 2)
XX
DE   Arabidopsis thaliana At4g32790 mRNA for unknown protein, complete cds,
DE   clone: RAFL19-60-D16.
XX
KW   CAP trapper; FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-916
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   ;
RL   Submitted (25-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Genomic Sciences Center; 1-7-22 Suehiro-cho,
RL   Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
RL   (E-mail:mseki@gsc.riken.go.jp, URL:http://pfgweb.gsc.riken.go.jp,
RL   Tel:81-45-503-9625, Fax:81-45-503-9586)
XX
RN   [2]
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Arabidopsis thaliana full-length cDNA";
RL   Unpublished.
XX
CC   An Arabidopsis full-length cDNA library was constructed
CC   essentially as reported previously (Seki et al. (1998) Plant
CC   J. 15:707-720; Seki et al. (2002) Science 296:141-145).
CC   cDNA cleaved with BamHI and XhoI was ligated to modified
CC   Lambda FLC-1-E vector (Carninci et al. (2001) Genomics
CC   77:79-90) digested with BamHI and SalI.
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://pfgweb.gsc.riken.go.jp/)
CC   for further details.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..916
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL19-60-D16"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             25..837
FT                   /codon_start=1
FT                   /gene="At4g32790/F4D11_10"
FT                   /product="unknown protein"
FT                   /db_xref="GOA:Q8GXB9"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q8GXB9"
FT                   /protein_id="BAC42936.1"
FT                   /translation="MLEETLYVPGSHSDKNLIQFLKNYLDMISSKYSFWNKTGGSDHFL
FT                   VACHDWAPSETRQYMAKCIRALCNSDVSEGFVFGKDVALPETTILVPRRPLRALGGKPV
FT                   SQRQILAFFAGGMHGYLRPLLLQNWGGNRDPDMKIFSEIPKSKGKKSYMEYMKSSKYCI
FT                   CPKGHEVNSPRVVEALFYECVPVIISDNFVPPFFEVLNWESFAVFVLEKDIPDLKNILV
FT                   SITEERYREMQMRVKMVQKHFLWHSKPERFDIFHMILHSIWYNRVFQI"
XX
SQ   Sequence 916 BP; 270 A; 175 C; 205 G; 266 T; 0 other;
     ctttatcttc ctttcagctc caaaatgttg gaagaaactc tgtatgtccc aggttctcac        60
     agcgataaga atctcattca gtttttgaag aactacctgg acatgatttc ttccaaatat       120
     agtttctgga ataaaactgg aggatcagat cattttctgg ttgcttgcca cgactgggct       180
     ccttccgaga cgaggcagta catggccaag tgcatcagag cattatgcaa ttctgatgtt       240
     tcagaaggtt ttgtgttcgg taaagatgta gctcttcctg agacgactat tcttgttcct       300
     aggagaccgc ttagggctct cggaggcaaa cctgtttcac aaaggcaaat acttgccttc       360
     tttgcaggcg gaatgcacgg ttaccttaga cctctcctat tgcaaaactg gggaggaaac       420
     agagatccag acatgaaaat attcagtgag atacccaaat ctaaagggaa aaagagttac       480
     atggagtaca tgaagagcag caagtattgc atctgcccaa aagggcacga agtcaatagc       540
     cctcgggtcg tggaggcatt gttctatgag tgtgtcccgg ttatcatatc cgataacttt       600
     gtacctccct tcttcgaagt tctgaattgg gagtcttttg cggtatttgt cttggagaaa       660
     gatattcctg atttgaagaa catattagtg tccataactg aggaaaggta tagagagatg       720
     cagatgagag tcaagatggt gcagaagcat ttcctttggc attctaaacc tgagagattc       780
     gatatatttc atatgatact tcactccatt tggtacaata gagtttttca aatttaaaac       840
     cacagagtag gtttgtgact gtagaacaag taactaacag agattcattc gttaatatag       900
     caaaaaagca ggttac                                                       916
//
spacer
spacer