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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AK118265; SV 1; linear; mRNA; STD; PLN; 1455 BP.
XX
AC   AK118265;
XX
DT   13-DEC-2002 (Rel. 74, Created)
DT   14-FEB-2004 (Rel. 78, Last updated, Version 2)
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DE   Arabidopsis thaliana At1g68470 mRNA for unknown protein, complete cds,
DE   clone: RAFL19-56-F23.
XX
KW   CAP trapper; FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1455
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   ;
RL   Submitted (25-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Genomic Sciences Center; 1-7-22 Suehiro-cho,
RL   Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
RL   (E-mail:mseki@gsc.riken.go.jp, URL:http://pfgweb.gsc.riken.go.jp,
RL   Tel:81-45-503-9625, Fax:81-45-503-9586)
XX
RN   [2]
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Arabidopsis thaliana full-length cDNA";
RL   Unpublished.
XX
CC   An Arabidopsis full-length cDNA library was constructed
CC   essentially as reported previously (Seki et al. (1998) Plant
CC   J. 15:707-720; Seki et al. (2002) Science 296:141-145).
CC   cDNA cleaved with BamHI and XhoI was ligated to modified
CC   Lambda FLC-1-E vector (Carninci et al. (2001) Genomics
CC   77:79-90) digested with BamHI and SalI.
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://pfgweb.gsc.riken.go.jp/)
CC   for further details.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1455
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL19-56-F23"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             22..1389
FT                   /codon_start=1
FT                   /gene="At1g68470/T26J14_4"
FT                   /product="unknown protein"
FT                   /db_xref="GOA:Q8GXF5"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q8GXF5"
FT                   /protein_id="BAC42883.1"
FT                   /translation="MTFNKRQVKINHWPEKNDKEKQKYSKNRETVKLTLLTLLLLCSIC
FT                   FLFLTLNFPFTIEFTASIPRTCDHNFTVYVYDLPKEFNIGLLQNCRHLNIYTNMCPHVA
FT                   NNGLGQPLHRGRTSWFSTHQFIAEMIFHARVENHPCRTYEPDTADIFYVPFYGGLYASS
FT                   VFREQNLTKRDELAVRLVNYISGQRWWKRSNGRDHFLAIGRTAWDFMRSSDTDFGANML
FT                   MQMPRVMNMSVLTVERQPWNGDNHFGIPYPSYFHPYTSAEMVTWQDKMKNVERPNLFSF
FT                   VGGPRKGLEKAAIRDELIKQCAESSHCELLKCENGGSRCHNPMTVLGVMARSRFCLQAP
FT                   GDSFTRRSTFDAMLAGCIPVFFSPHTMYTQYMWYLPDDKRSYSVFMDEKNNAHIEQELL
FT                   RISENEVVQMREIVIDLIPRLTYAHPNSTNYDLPDAVDIALEALAKQARDNVVVSL"
XX
SQ   Sequence 1455 BP; 408 A; 360 C; 326 G; 361 T; 0 other;
     ctctctctct ctccatttac catgactttc aataagaggc aagtcaagat caatcactgg        60
     ccggagaaga acgacaaaga gaagcagaaa tactccaaaa acagagaaac cgtcaagttg       120
     acacttctca ctcttcttct cctttgctca atttgtttcc tcttcctaac tctcaatttc       180
     cccttcacaa tagaattcac agcctcaatc cctcgcacat gcgaccacaa tttcaccgtc       240
     tacgtgtacg atctccccaa agagttcaac atcggtctcc tccaaaattg ccgacactta       300
     aacatctaca ccaacatgtg ccctcacgtg gccaacaatg gccttggaca gcctcttcac       360
     cgcggacgaa cttcgtggtt ctctacgcac cagttcatag ccgagatgat cttccacgca       420
     cgtgtcgaaa accatccatg ccgcacgtat gagccagaca ctgccgacat cttctacgtc       480
     cctttctacg gtggtctcta cgcttcaagc gtgttccgag agcaaaacct gaccaagcgc       540
     gacgagctag ctgtcagatt agtcaactac attagtggcc aacgatggtg gaagagaagc       600
     aacggtcgtg atcatttctt ggccataggg aggacagctt gggatttcat gcgctcctcc       660
     gacactgact ttggagctaa catgctcatg caaatgccac gtgtcatgaa catgtcggtg       720
     ctgaccgtgg agaggcagcc ttggaatggt gacaatcact ttggtatacc gtatccttct       780
     tattttcatc cgtacacgtc agcagaaatg gtgacgtggc aggacaagat gaaaaatgtc       840
     gagagaccaa acttgtttag ttttgtcggt gggccgagaa agggcttgga gaaagctgcc       900
     attagagacg agctgatcaa gcaatgcgct gagtcgagcc attgtgagct tctcaagtgt       960
     gaaaatggag ggtccaggtg tcacaaccca atgacggtat taggagtgat ggctaggtca      1020
     cggttttgcc tacaagcacc gggggactca ttcacgcgga gatcaacatt cgatgcgatg      1080
     ttagccgggt gcataccggt ctttttttca ccccacacta tgtatacaca gtacatgtgg      1140
     tatcttccgg acgataaaag aagttactca gtgttcatgg acgaaaagaa caacgctcat      1200
     atagaacaag agctcttgag gatctcggag aacgaagtgg ttcaaatgag agaaatagtc      1260
     atcgatttga tcccgagact gacttatgcg cacccaaact ctactaacta tgatttacca      1320
     gatgcggttg atatagcgtt agaggcacta gctaagcaag caagagacaa tgttgtggtt      1380
     tcattgtaag acctatagtt ttgtgctact cagatgtaac taatcccaaa gaataaagaa      1440
     ttgtagtgtt cagac                                                       1455
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