EBI Dbfetch

ID   AK117711; SV 1; linear; mRNA; STD; PLN; 1944 BP.
XX
AC   AK117711;
XX
DT   13-DEC-2002 (Rel. 74, Created)
DT   14-FEB-2004 (Rel. 78, Last updated, Version 2)
XX
DE   Arabidopsis thaliana At5g11610 mRNA for unknown protein, complete cds,
DE   clone: RAFL17-39-C03.
XX
KW   CAP trapper; FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1944
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   ;
RL   Submitted (25-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Motoaki Seki, RIKEN Genomic Sciences Center; 1-7-22 Suehiro-cho,
RL   Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
RL   (E-mail:mseki@gsc.riken.go.jp, URL:http://pfgweb.gsc.riken.go.jp,
RL   Tel:81-45-503-9625, Fax:81-45-503-9586)
XX
RN   [2]
RA   Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA   Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Arabidopsis thaliana full-length cDNA";
RL   Unpublished.
XX
CC   An Arabidopsis full-length cDNA library was constructed
CC   essentially as reported previously (Seki et al. (1998) Plant
CC   J. 15:707-720; Seki et al. (2002) Science 296:141-145).
CC   cDNA cleaved with BamHI and XhoI was ligated to modified
CC   Lambda FLC-1-E vector (Carninci et al. (2001) Genomics
CC   77:79-90) digested with BamHI and SalI.
CC   This clone is in a modified pBluescript vector.
CC   Please visit our web site (http://pfgweb.gsc.riken.go.jp/)
CC   for further details.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1944
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL17-39-C03"
FT                   /note="common name: thale cress"
FT                   /db_xref="taxon:3702"
FT   CDS             175..1815
FT                   /codon_start=1
FT                   /gene="At5g11610/F15N18_200"
FT                   /product="unknown protein"
FT                   /db_xref="GOA:Q8GYD4"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q8GYD4"
FT                   /protein_id="BAC42362.1"
FT                   /translation="MDQSRVLRFIGQVETCRVVLLMVLVVAFVSGLQYFELSPVLLSIV
FT                   SPGNSTISEFRKSNDTTKSAENETFLASQEASTGLKPYNRTTEVLKSSEHKFLDDSHKI
FT                   EASGQRRRSNETASSLHPLQPKIPQIRKKYPHRSITKPPSIVISIKQMNNMILKRHNDP
FT                   KNSLAPLWGSKVDQELKTARDKIKKAALVKKDDTLYAPLYHNISIFKRSYELMEQTLKV
FT                   YVYSEGDRPIFHQPEAIMEGIYASEGWFMKLMESSHRFLTKDPTKAHLFYIPFSSRILQ
FT                   QKLYVHDSHSRNNLVKYLGNYIDLIASNYPSWNRTCGSDHFFTACHDWAPTETRGPYIN
FT                   CIRALCNADVGIDFVVGKDVSLPETKVSSLQNPNGKIGGSRPSKRTILAFFAGSLHGYV
FT                   RPILLNQWSSRPEQDMKIFNRIDHKSYIRYMKRSRFCVCAKGYEVNSPRVVESILYGCV
FT                   PVIISDNFVPPFLEILNWESFAVFVPEKEIPNLRKILISIPVRRYVEMQKRVLKVQKHF
FT                   MWHDGEPVRYDIFHMILHSVWYNRVFQTF"
XX
SQ   Sequence 1944 BP; 577 A; 405 C; 388 G; 574 T; 0 other;
     gaacaaaatt taaagccatc gattgccttg tcttgtctct ttgcctgtta attatttgtc        60
     tgaatcttcc tctcctgatg atcactccaa gtaacttcaa agaaacgctc agattcgaca       120
     gttctatata tcaacaaaca tcatctcaag ctcttacctg atatctctgt tttgatggat       180
     caaagtcggg ttttgcggtt tataggccaa gtggaaacct gtagagttgt tcttctcatg       240
     gttctggttg ttgccttcgt ttcaggcctt cagtattttg agctctctcc agtactacta       300
     tctattgttt cacctggaaa cagcactatt tctgaattca gaaaatccaa tgatacgact       360
     aaaagtgctg aaaatgaaac gtttcttgca tctcaagaag catccaccgg gcttaaaccg       420
     tataacagaa ctacagaggt attgaagagt tctgagcaca agtttctgga tgattctcac       480
     aaaatagaag cttctggaca acgtagaaga agcaatgaaa ctgcaagttc tctgcatcct       540
     cttcaaccaa agattcctca aatccgcaag aaatatcccc ataggagcat aacaaagcca       600
     ccatcaattg tcatatcaat aaagcagatg aacaatatga tattgaagcg gcataatgat       660
     ccaaaaaatt cacttgcacc tctctgggga tcaaaagtgg accaagagct taaaactgca       720
     agagacaaga tcaagaaagc ggctttggtc aagaaagatg atactcttta cgcacctctc       780
     taccacaaca tatccatctt caaaaggagc tatgagctaa tggaacaaac tctgaaagtg       840
     tatgtctact cggaagggga tagaccaatt ttccatcagc ctgaggcaat aatggaaggg       900
     atttacgcat cagaaggatg gtttatgaaa ctaatggaga gtagccatag attcttgaca       960
     aaagatccca ccaaagctca tttattctac atacctttca gttcaagaat tcttcaacag      1020
     aaactttacg ttcatgactc tcacagtcgt aataatcttg ttaaatatct tggaaactac      1080
     attgatctca tcgcttccaa ctacccttcc tggaatagaa cttgtggctc cgatcatttc      1140
     ttcaccgctt gccatgactg ggctccaacc gagactaggg gaccgtacat aaactgcatc      1200
     agagcactct gtaacgccga tgttggcata gactttgtgg tcggaaaaga tgtttctttg      1260
     ccggaaacta aagtctcttc tttgcaaaat ccaaacggaa aaattggagg tagccgccct      1320
     tccaagcgaa ccatcctcgc ttttttcgcc gggagcttgc acggttacgt tagacccatc      1380
     ttgcttaacc aatggtcatc gagacctgaa caagatatga agatctttaa tcgtatcgat      1440
     cataaatcat acatccgtta catgaaacgc agcagattct gcgtttgcgc taaaggttac      1500
     gaggttaata gccctagagt ggttgagtcg attttgtacg gttgtgttcc ggtgattatc      1560
     tctgataact ttgtgccacc gtttcttgag attctgaatt gggaatcttt cgcagtgttt      1620
     gtgccggaga aagagatccc gaatctaagg aagattctga tatcgattcc ggtgaggaga      1680
     tacgtggaga tgcaaaagag ggttttgaag gttcaaaaac atttcatgtg gcatgatggt      1740
     gaaccggttc ggtatgatat atttcatatg attcttcatt cggtttggta taaccgagtt      1800
     tttcaaacgt tttagccaga ttaatcaggt ttgacaaggg ttttggtttg gcctttgcta      1860
     cttgccaata attaactacg tctccggaag attgtatttt gtagattact gattcatatt      1920
     agccaattgg acttgattac aaat                                             1944
//