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EBI DbfetchID AK117140; SV 1; linear; mRNA; STD; PLN; 2272 BP. XX AC AK117140; XX DT 13-DEC-2002 (Rel. 74, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Arabidopsis thaliana At5g45300 mRNA for putative beta-amylase, complete DE cds, clone: RAFL16-68-D16. XX KW CAP trapper; FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-2272 RA Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M., RA Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y., RA Shinozaki K.; RT ; RL Submitted (25-NOV-2002) to the EMBL/GenBank/DDBJ databases. RL Motoaki Seki, RIKEN Genomic Sciences Center; 1-7-22 Suehiro-cho, RL Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan RL (E-mail:mseki@gsc.riken.go.jp, URL:http://pfgweb.gsc.riken.go.jp, RL Tel:81-45-503-9625, Fax:81-45-503-9586) XX RN [2] RA Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M., RA Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y., RA Shinozaki K.; RT "Arabidopsis thaliana full-length cDNA"; RL Unpublished. XX CC An Arabidopsis full-length cDNA library was constructed CC essentially as reported previously (Seki et al. (1998) Plant CC J. 15:707-720; Seki et al. (2002) Science 296:141-145). CC cDNA cleaved with BamHI and XhoI was ligated to modified CC Lambda FLC-1-E vector (Carninci et al. (2001) Genomics CC 77:79-90) digested with BamHI and SalI. CC This clone is in a modified pBluescript vector. CC Please visit our web site (http://pfgweb.gsc.riken.go.jp/) CC for further details. XX FH Key Location/Qualifiers FH FT source 1..2272 FT /organism="Arabidopsis thaliana" FT /chromosome="5" FT /ecotype="Columbia" FT /mol_type="mRNA" FT /clone="RAFL16-68-D16" FT /note="common name: thale cress" FT /db_xref="taxon:3702" FT CDS 24..2093 FT /codon_start=1 FT /gene="At5g45300/K9E15_8" FT /product="putative beta-amylase" FT /db_xref="GOA:Q9FH80" FT /db_xref="HSSP:1FA2" FT /db_xref="InterPro:IPR008540" FT /db_xref="UniProtKB/TrEMBL:Q9FH80" FT /protein_id="BAC41818.1" FT /translation="MHTLNNTITTTTGSQDPNLDPIPDPDQFPNRNRNQPQSRRPRGFA FT AAAAAASIAPTENDVNNGNIAGIGGGEGSSGGGGGGGGKGKREREKEKERTKLRERHRR FT AITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQPNHVVQFP FT TRSIESPLSSSTLKNCAKAAIESQQHSVLRNDEKLAPVSLDSIGIAESDHPGNGRYTSV FT SPITSVGCLEANQLIQDVHSAEQCNDFTESFYVPVYAMLPVGIIDNFGQLVDPEGVRQE FT LSYMKSLNVDGVVIDCWWGIVEGWNPQKYVWSGYRELFNLIRDFKLKLQVVMAFHEYGG FT NASGNVMISLPQWVLKIGKDNPDIFFTDREGRRSFECLNWSIDKERVLHGRTGIEVYFD FT FMRSFRSEFDDLFVEGLITAVEIGLGASGELKYPSFPERMGWIYPGIGEFQCYDKYSQL FT SLQKEAKSRGFTFWGKGPENAGQYSSHPHETVFFQERGEYDSYYGRFFLNWYSQLLIGH FT AENVLSLANLAFEETKIIVKIPAIYWSYKTASHAAELTAGYYNPSNRDGYSLVFETLKK FT YSVTVKFVCPGPQMSPNAHEEALADPEGLSWQVINAAWDKGLQIGGENAITCFDRDGCM FT RLIDIAKPRNHPDGYHFSFFTYRQPSPLVQGSTCFPDLDYFIKRMHGDIRDKQF" XX SQ Sequence 2272 BP; 652 A; 442 C; 549 G; 629 T; 0 other; gcgagcaact tcaccgcaca aaaatgcata ctctcaacaa caccatcacc accaccaccg 60 gttcgcaaga tccgaatctc gacccaattc cagacccgga tcaatttccc aaccggaacc 120 gcaaccaacc acaatctcgc cgccctcgcg gattcgccgc tgcagcagca gcagcgtcga 180 tagctccaac ggaaaacgat gtaaacaacg gaaacatcgc cggaatcggc ggtggagaag 240 gaagcagcgg cggcggagga ggtggaggag ggaaagggaa gagagagagg gagaaggaaa 300 aagagagaac gaagcttaga gaaagacata gacgagcaat cactagtaga atgctcgccg 360 gattaagaca gtacggtaat tttccgttac cggcgcgtgc tgatatgaat gacgtaatcg 420 ctgctttggc tcgtgaagct ggttggagtg ttgaagccga tggtactact tatcggcaat 480 cacagcaacc aaatcatgtg gtacagtttc cgacgagatc tattgagagt ccactttctt 540 ctagtacatt gaagaactgt gctaaggctg caattgaatc tcagcagcat tcagttctta 600 ggaacgatga gaaacttgct cctgtgtctc ttgattctat tggtattgcc gagagtgatc 660 atcccgggaa tggaaggtat actagtgtta gtcctatcac ctccgttgga tgcttggaag 720 ccaatcagct tatacaagat gttcattccg cagagcaatg taatgacttc acagagagct 780 tttatgtccc tgtgtacgcc atgcttccag ttggcattat agacaacttt ggccagttgg 840 ttgatcctga aggtgtaaga caagaattaa gttacatgaa gtcattaaat gtcgatggag 900 tagtaataga ttgttggtgg ggaatagttg aaggatggaa ccctcagaaa tatgtatggt 960 ctggctatag ggagctcttt aaccttatca gagacttcaa acttaagcta caggtggtga 1020 tggcatttca tgagtatgga gggaatgcat ctgggaatgt gatgatttcg ttgccacagt 1080 gggtgttgaa gattgggaaa gacaatccag acattttttt cactgatcgt gaaggaagaa 1140 gaagtttcga gtgtttgaat tggagcattg acaaggaacg ggtattgcat ggacgaactg 1200 gtatagaggt ctattttgat tttatgagaa gcttccggtc agagtttgat gacttgtttg 1260 tggaaggact aattactgcg gttgagattg gtcttggagc ttctggtgaa ctaaagtacc 1320 catctttccc agaaaggatg ggttggattt atcccggtat cggtgagttt cagtgttatg 1380 acaaatattc gcaattgagt ctgcaaaagg aagcaaagtc acgaggattc actttctggg 1440 gtaaaggacc agagaatgct ggtcaataca gttctcatcc acatgaaact gtgttcttcc 1500 aagaaagagg tgaatatgac agctattatg gccgcttctt cttaaattgg tactcacaat 1560 tgctaattgg tcatgctgag aatgttctgt ctcttgcaaa tctcgcattt gaggagacga 1620 agattattgt caagataccg gcaatatact ggtcatacaa gacagctagt catgctgctg 1680 aattaactgc aggatactac aacccttcaa accgtgatgg gtactctctt gttttcgaaa 1740 ctctgaagaa atattccgtg actgtgaagt ttgtgtgccc tgggccacaa atgtctccca 1800 atgcgcatga agaagcatta gctgatccag aaggtttaag ttggcaggtg atcaacgcag 1860 cttgggataa gggacttcaa atcggtggag agaatgcgat tacttgtttc gacagagatg 1920 gttgtatgag attaatcgat atagctaaac caagaaacca tccagatggc tatcacttct 1980 ccttcttcac atatcgtcaa ccttctcctc tggttcaagg atctacttgc tttccagatt 2040 tggactactt cattaaacgc atgcatggcg acataagaga taaacagttt taggatttgc 2100 atggtcttag gattctttta gtaagtgtct tttgtttaaa acttcaaaat ctgttttgtt 2160 ttgtttattc tctcctcaag gcctatattt aagacgattg atcttgtaat ctttaaacac 2220 cttaacactt cactagttga agatgaacta actaattaaa ttcttaaatg cg 2272 // |
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