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EBI DbfetchID AK108140; SV 1; linear; mRNA; STD; PLN; 1526 BP. XX AC AK108140; XX DT 19-JUL-2003 (Rel. 76, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Oryza sativa Japonica Group cDNA clone:002-139-E08, full insert sequence. XX KW FLI_CDNA; oligo capping. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-1526 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K., RA Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I., RA Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y., RA Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N., RA Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R., RA Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M., RA Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H., RA Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K., RA Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S., RA Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A., RA Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y., RA Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A., RA Yazaki J., Yokomizo S., Yoshimura A.; RT ; RL Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Department of Molecular Genetics, Head of Laboratory of Gene Expression; RL 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan XX RN [2] RA Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., RA Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., RA Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y., RA Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., RA Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., RA Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., RA Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., RA Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., RA Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., RA Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., RA Yoshino M., Hayashizaki Y.; RT "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from RT japonica Rice"; RL Science 301:376-379(2003). XX CC This clone is one of the 28K full-length cDNA clones from japonica CC rice. CC URL : http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., CC Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., CC Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., CC Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. CC and Yamamoto,M. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., CC Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., CC Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., CC Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., CC Yoshimura,A., Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences Center CC and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., CC Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., CC Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., CC Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., CC Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., CC Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., CC Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., CC Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., CC Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., CC Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..1526 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="002-139-E08" FT /db_xref="taxon:39947" FT CDS 21..1364 FT /note="(RAP Annotation release2) Similar to Alpha FT galactosyltransferase (Fragment)" FT /note="(Rice Genome Annotation Project) glycosyltransferase FT 6, putative, expressed" FT /note="mapping to R02-TIGRv4S1-001273F (Chr.2: short FT arm=30045880, long arm=30047406, direction=forward) for FT TIGR Pseudomol ver4" FT /db_xref="GOA:Q6Z5M3" FT /db_xref="InterPro:IPR008630" FT /db_xref="UniProtKB/TrEMBL:Q6Z5M3" FT /protein_id="BAG98296.1" FT /translation="MRATTGARHLHPPWRRGLRHHRQSTMPPRASRGRLADAALFTAGA FT VLGSVLLLTLASPFSSSSSPSSGVGSGEVDRLGGGRTFYDDPGVAYTIDRPIVGWDEKR FT AEWLRAHPELAGGGGERVLMVSGSQPEPCGSPAGDSLLTRLLKNKLDYCRLNGVQLLYN FT TALLRPSMDRYWAKIPVVRAAMVAHPEAEWVWWVDSDAVLTDMDFRLPLSRYRDHNFVA FT HGWPHLVYESRSWTSLNAGVFLIRNCQWSLDFMDAWAAMGPDSPEYQHWGAVLTSTFKD FT KVFNESDDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRLGNITERYEAMERG FT AAPLRRRHAEAEHASYAAARDAALAGAGLAESGVSGWRRPFVTHFTGCQPCSGHRNEHY FT TGKSCDEGIRRALSFADDQVLRAYGFRHAGPLSDAVSPLPFDHPTQTA" XX SQ Sequence 1526 BP; 236 A; 487 C; 559 G; 244 T; 0 other; gtcagtgccc agcgtgcgcc atgcgtgcga cgacgggcgc gcggcatctt caccccccat 60 ggaggcgcgg gctgaggcac caccgacagt cgacgatgcc gccgcgcgcc agcaggggga 120 ggctcgccga cgcggccctc ttcaccgccg gcgccgtgct ggggtccgtg ctgctgctga 180 cgctcgcctc gcccttctcc tcctcgtcgt ctccgtcgtc cggcgtgggg agcggtgagg 240 tcgaccggct cggcggcggg cgaacgttct acgacgaccc gggggtggcg tacaccatcg 300 accggcccat cgtcgggtgg gacgagaagc gcgccgagtg gctccgcgcg cacccggagc 360 tggctggagg cggcggcgag cgcgtgctga tggtgtccgg gtcgcagccg gagccgtgcg 420 ggtcgcctgc gggggacagc ttgctgacac ggctgctgaa gaacaagctg gattactgcc 480 ggctcaacgg cgtgcagctg ctgtacaaca cggcgctcct ccggccgtcg atggacaggt 540 actgggcgaa gatcccggtg gtgcgggccg ccatggtcgc ccacccggag gcggagtggg 600 tgtggtgggt ggactccgac gcggtgctca ccgacatgga cttccgcctc ccgctgagcc 660 ggtaccgcga ccacaacttc gtcgcccatg gctggccgca cctcgtgtac gagtccaggt 720 cgtggaccag cctcaacgcc ggcgtgttcc tcatccgcaa ctgccagtgg tcgctcgact 780 tcatggacgc gtgggccgcc atggggccgg actcgccgga gtaccagcac tggggcgccg 840 tgctcacctc caccttcaag gacaaggtgt tcaacgagtc cgacgaccag tcggcgctcg 900 tgtacatgct gctgcagagc ggcagcccgt ggcgggacaa ggtgtaccta gagagcgact 960 actacttcga ggggtactgg ctggagatcg cggggaggct cggcaacatc acggagcggt 1020 acgaggcgat ggagcgcggg gcggcgccgc tgcggaggcg gcacgcggag gcggagcacg 1080 cgtcgtacgc ggcggcgagg gacgccgcgc tggcgggcgc cgggctggcg gagagcgggg 1140 tgagcgggtg gcggcgcccg ttcgtgacgc acttcaccgg atgccagccg tgcagcggcc 1200 accggaacga gcactacacg gggaagagct gcgacgaggg catccgccgc gcgctcagct 1260 tcgccgacga ccaggtgctc agggcgtacg ggttccggca cgccggcccg ctcagcgacg 1320 ccgtgagccc gctgccgttc gaccacccca cgcaaacggc gtgagagtga cgtggctcat 1380 cagccaatga aaccgtcaaa gctgttactg ttaaaccgtg catacagcag acagcttttg 1440 ctggtgtgtg cgaggtgagt tttcgaggtt gattgcttgc tagtacagcg gtgcagtaaa 1500 atttgttttg ttcttcgtgt tgatac 1526 // |
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