 |
|
EBI DbfetchID AK105101; SV 1; linear; mRNA; STD; PLN; 1725 BP. XX AC AK105101; XX DT 19-JUL-2003 (Rel. 76, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Oryza sativa Japonica Group cDNA clone:001-100-D03, full insert sequence. XX KW FLI_CDNA; oligo capping. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-1725 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K., RA Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I., RA Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y., RA Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N., RA Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R., RA Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M., RA Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H., RA Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K., RA Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S., RA Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A., RA Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y., RA Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A., RA Yazaki J., Yokomizo S., Yoshimura A.; RT ; RL Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Department of Molecular Genetics, Head of Laboratory of Gene Expression; RL 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan XX RN [2] RA Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., RA Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., RA Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y., RA Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., RA Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., RA Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., RA Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., RA Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., RA Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., RA Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., RA Yoshino M., Hayashizaki Y.; RT "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from RT japonica Rice"; RL Science 301:376-379(2003). XX CC This clone is one of the 28K full-length cDNA clones from japonica CC rice. CC URL : http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., CC Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., CC Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., CC Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. CC and Yamamoto,M. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., CC Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., CC Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., CC Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., CC Yoshimura,A., Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences Center CC and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., CC Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., CC Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., CC Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., CC Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., CC Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., CC Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., CC Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., CC Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., CC Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..1725 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="001-100-D03" FT /db_xref="taxon:39947" FT CDS 57..1508 FT /note="(RAP Annotation release2) Galactosyl transferase FT family protein" FT /note="(Rice Genome Annotation Project) glycosyltransferase FT 3, putative, expressed" FT /note="mapping to R03-TIGRv4S1-000638R (Chr.3: short FT arm=10832846, long arm=10834573, direction=reverse) for FT TIGR Pseudomol ver4" FT /db_xref="GOA:Q10MK2" FT /db_xref="InterPro:IPR008630" FT /db_xref="UniProtKB/TrEMBL:Q10MK2" FT /protein_id="BAG97093.1" FT /translation="MSKLQDRHGGEAAADVGRRARHQRLLLSFPVFPIVLLLLAPCTIF FT FFTSGDVPLPRIRIEYARRDAPTITAVAADTSPPPPSPPSSSPPPLSFPPPPPPPSSPP FT PPALPVVDDHSDTQRSLRRLRQLTDSPYTLGPAVTGYDARRAEWLRDHTEFPASVGRGR FT PRVLMVTGSAPRRCKDPEGDHLLLRALKNKVDYCRVHGFDIFYSNTVLDAEMSGFWTKL FT PLLRALMLAHPETELLWWVDSDVVFTDMLFEPPWGRYRRHNLVIHGWDGAVYGAKTWLG FT LNAGSFIIRNCQWSLDLLDAWAPMGPPGPVRDMYGKIFAETLTNRPPYEADDQSALVFL FT LVTQRHRWGAKVFLENSYNLHGFWADIVDRYEEMRRQWRHPGLGDDRWPLITHFVGCKP FT CGGDDASYDGERCRRGMDRAFNFADDQILELYGFAHESLDTMAVRRVRNDTGRPLDADN FT QELGRLLHPTFKARKKKTSRAARPM" XX SQ Sequence 1725 BP; 306 A; 564 C; 544 G; 311 T; 0 other; gatgcgaacg tgttacctgc agctgctgac tcgagtgtgt ggctgaggcg gggatcatgt 60 cgaagttgca ggaccgccac ggtggcgagg cggcggccga cgtcggccgc cgagcgcgtc 120 accagcggct gctgctcagc ttcccggtgt tcccgatcgt gctgctgctc ctcgccccgt 180 gcaccatctt cttcttcacg tccggcgacg tgccgctccc ccgcatccgc atcgagtacg 240 ctcgccgtga cgctccgacg atcaccgcgg tggcagcgga cacgtcgccg ccaccacctt 300 caccaccgtc gtcgtcgccg ccaccgttgt cgtttccgcc tccaccgcct ccgccatcat 360 caccacctcc gccagctctg cctgtggtcg atgatcacag cgacacgcaa cggtcgctcc 420 ggcggctgcg gcagctgacg gacagcccgt acacgctcgg cccggccgtg acgggctacg 480 acgcgcgcag agcggagtgg ctgcgcgatc acacggagtt cccggcgtcg gtggggcggg 540 gccggccgcg ggtgctgatg gtgaccgggt cggcgccgcg gcggtgcaag gatcccgagg 600 gcgaccacct gctcctccgc gcgctcaaga acaaggtgga ctactgccgc gtccacggct 660 tcgacatctt ctacagcaac acggtgctcg acgccgagat gtccgggttc tggacgaagc 720 tgccgctgct gcgcgcgctg atgctggcgc acccggagac ggagctgctc tggtgggtgg 780 actccgacgt ggtgttcacc gacatgctgt tcgagccgcc gtggggcagg tacaggcgcc 840 acaacctcgt catccacgga tgggacggcg ccgtgtacgg cgccaagacg tggctcggcc 900 tcaacgccgg cagcttcatc atccgcaact gccagtggtc gctcgacctg ctcgacgcct 960 gggcgcccat ggggccgccg ggccccgtcc gcgacatgta cggcaagatc ttcgccgaga 1020 cgctcaccaa ccggccgccg tacgaggccg acgaccagtc ggcgctcgtc ttcctcctcg 1080 tgacgcagcg ccaccggtgg ggcgccaagg tgttcctcga gaactcgtac aacctgcacg 1140 gcttctgggc ggacatcgtc gacaggtacg aggagatgcg gcggcagtgg cgccacccgg 1200 ggctcggcga cgaccggtgg ccgctgatca cgcacttcgt cggctgcaag ccgtgcggcg 1260 gggacgacgc gagctacgac ggggagcgct gccggcgagg catggaccgg gccttcaact 1320 tcgccgacga ccagatactg gagctgtacg ggttcgcgca cgagtcgctc gacaccatgg 1380 ccgtgcgccg cgtcaggaac gacaccggcc ggccgctgga cgccgacaac caggagctcg 1440 gccgcctact gcacccaaca ttcaaagccc gcaaaaagaa gacatccaga gcagccaggc 1500 ccatgtaatg acgaagatca tatcgaaaac cgtgtaatta tggagatatg atactttgat 1560 taggttgtat tttcgtttgg agatatttct tgaatattga tgtatgaacg aggaccggag 1620 atatttaatg tgttgttttt acacccaaaa aaattctcac tttatgtacg agctaattcc 1680 ggttacttga cttattaaaa aattgcgagc aatgttttgt tgggg 1725 // |
|