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EBI DbfetchID AK103094; SV 1; linear; mRNA; STD; PLN; 2065 BP. XX AC AK103094; XX DT 19-JUL-2003 (Rel. 76, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Oryza sativa Japonica Group cDNA clone:J033118K21, full insert sequence. XX KW CAP trapper; FLI_CDNA. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-2065 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K., RA Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I., RA Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y., RA Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N., RA Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R., RA Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M., RA Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H., RA Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K., RA Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S., RA Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A., RA Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y., RA Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A., RA Yazaki J., Yokomizo S., Yoshimura A.; RT ; RL Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Department of Molecular Genetics, Head of Laboratory of Gene Expression; RL 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan XX RN [2] RA Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., RA Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., RA Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y., RA Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., RA Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., RA Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., RA Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., RA Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., RA Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., RA Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., RA Yoshino M., Hayashizaki Y.; RT "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from RT japonica Rice"; RL Science 301:376-379(2003). XX DR GOA; Q2R0L2. DR InterPro; IPR001117; Cu-oxidase. DR InterPro; IPR002355; Cu_oxidase_Cu_BS. DR InterPro; IPR008972; Cupredoxin. DR InterPro; IPR011706; Cu-oxidase_2. DR InterPro; IPR011707; Cu-oxidase_3. DR UniProtKB/Swiss-Prot; Q2R0L2; LAC19_ORYSJ. XX CC This clone is one of the 28K full-length cDNA clones from japonica CC rice. CC URL : http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., CC Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., CC Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., CC Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. CC and Yamamoto,M. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., CC Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., CC Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., CC Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., CC Yoshimura,A., Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences Center CC and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., CC Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., CC Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., CC Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., CC Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., CC Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., CC Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., CC Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., CC Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., CC Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..2065 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="J033118K21" FT /db_xref="taxon:39947" FT misc_feature 1..2065 FT /note="(RAP Annotation release2) Cupredoxin domain FT containing protein" FT /note="(Rice Genome Annotation Project) laccase LAC2-1, FT putative, expressed" FT /note="mapping to R11-TIGRv4S1-000772F (Chr.11: short FT arm=24922344, long arm=24924690, direction=forward) for FT TIGR Pseudomol ver4" XX SQ Sequence 2065 BP; 469 A; 626 C; 541 G; 429 T; 0 other; ggaagcatca cttcatcaca aaacctacca agctaattca gcatttcagc ttggttctat 60 aggtaggagc tggtaagatc accatggaga agctctccat ggtgacctct ctcctctgcg 120 ccatcactgt cgcggttctc gccgtggcgg tggtcagcgg cgaggcggct gtggtggagc 180 acaccttcgt ggtgcacgag atgaacgcga cgcacctgtg caacacgacc aagatctacg 240 tggtgaacgg acagttcccg ggccccacgg tggacgtgac ggagggcgac acggtggttg 300 tccatgtcat caacaagctg ccatttgggc ttaccatcca ttggcatggt gtccgccaga 360 tgaggagctg ctgggctgat ggggctggtt ttgtcaccga gtgtcctatc ccacccggaa 420 acgagcacac ctaccgcttc aacgtcaccg gccaggtcgg cacgctgtgg tggcacgccc 480 acgtcacctg cctccgggcc accatcaatg gtgccttcat cgttcgccct cgtgatggga 540 agtacccctt cccgacaccg gccaaggacg tgccgatcat cataggagaa tggtgggagc 600 ttgacctcat cgagctagat agaaggatga tggatggcaa cttcgacgac aacccgttgt 660 ctgcgacgat caatgggaag ctcggcgacc tcagcaactg ctctcgcatg gtggaggaaa 720 gcttcatcct cgacgttaag cacggggaga gctaccttct ccgggtcatc aacactgcac 780 tcttctctga atactacttc agggtcgccg gccacacgtt cacggtggtc ggcgccgatg 840 gcaactacct gacgccattt aagacggaca tggtcaccgt cgcccctggc gaggccatcg 900 acgtgatcat ggtcgccgac gcgccaccgg cgcactacca catgatcgcg ctggctaacc 960 aacctccgga gccggacccg cagatcccgg tgttcacctc tcgtggcctt gtccgctacg 1020 ccggcaccac cgccacaaca acggcctccc ggtaccgatg ccgatcatgc ccaaccaaca 1080 caacaccatg ccgtcctact acttccacgc caacctcacc ggccttgccc acccagagcg 1140 ccatcgtgtc cctatgcatg tcgacgagcg cctcttcgtc accttggggc tcggctccat 1200 atgccgtggc cagaacacca cctgcaagcg gcggcgcagc ccggagacca tcgtggtggc 1260 caccatgaac aacgtctcct tcgcccaccc gaaaaccacc gcgctcctcg agcgctacta 1320 cgacggcaca tcgaagggcg tgtacacgga ggacttcccc atccggccgc cgcggccttt 1380 caactacacc aaccgtgatc tcatccctcc cggcccgctc gaggaggcgt tggagccgac 1440 gttcaaggcg accaagctga agcggttcaa gtacaacaca tcggtggaga tcatcttcca 1500 gagcaccacg ctgatgcaga gcgactccaa ccccatgcac ctccatggct atgatgtctt 1560 cctccttgca caggggctcg gcaactttaa cgccaagagg gatgtcagga agttcaacta 1620 ccacaacccg cagctaagga acaccgtgca ggttccacgt ggcgggtggg ccgccattcg 1680 cttcgtcaca gacaatccag ggatgtggta cctacactgt cactttgagt tccacatcat 1740 tatgggcatg gcgacggcgt tcatcgtgga ggatgggccg acaccagaga cgagcctgcc 1800 tccaccacca ccggagttca agagatgtgg caacaatggt ctgagtcaac catgagggtt 1860 ttgaagagaa agtccaaatt ttttactgct acgagtaata aaaaataaaa aatgcatgga 1920 tttgtagtat gcattgtatt ggtgatgatt attcttactg taaaagagat ttactattct 1980 tttttggtat tcattgttgt aaggtggcaa agtgtaagta aatccatttg gatttaattt 2040 atgaagaaga gaacaattat ttatg 2065 // |
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