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EBI DbfetchID AK102799; SV 1; linear; mRNA; STD; PLN; 1601 BP. XX AC AK102799; XX DT 19-JUL-2003 (Rel. 76, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Oryza sativa Japonica Group cDNA clone:J033108E05, full insert sequence. XX KW CAP trapper; FLI_CDNA. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-1601 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K., RA Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I., RA Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y., RA Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N., RA Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R., RA Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M., RA Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H., RA Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K., RA Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S., RA Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A., RA Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y., RA Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A., RA Yazaki J., Yokomizo S., Yoshimura A.; RT ; RL Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Department of Molecular Genetics, Head of Laboratory of Gene Expression; RL 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan XX RN [2] RA Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., RA Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., RA Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y., RA Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., RA Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., RA Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., RA Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., RA Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., RA Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., RA Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., RA Yoshino M., Hayashizaki Y.; RT "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from RT japonica Rice"; RL Science 301:376-379(2003). XX DR GOA; Q0ITW7. DR InterPro; IPR002085; ADH_SF_Zn. DR InterPro; IPR002328; ADH_Zn_CS. DR InterPro; IPR011032; GroES-like. DR InterPro; IPR013149; ADH_Zn-bd. DR InterPro; IPR013154; ADH_GroES-like. DR InterPro; IPR016040; NAD(P)-bd_dom. DR UniProtKB/Swiss-Prot; Q0ITW7; ADH2_ORYSJ. XX CC This clone is one of the 28K full-length cDNA clones from japonica CC rice. CC URL : http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., CC Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., CC Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., CC Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. CC and Yamamoto,M. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., CC Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., CC Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., CC Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., CC Yoshimura,A., Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences Center CC and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., CC Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., CC Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., CC Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., CC Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., CC Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., CC Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., CC Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., CC Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., CC Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..1601 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="J033108E05" FT /db_xref="taxon:39947" FT misc_feature 1..1601 FT /note="(Rice Genome Annotation Project) alcohol FT dehydrogenase 2, putative, expressed" FT /note="mapping to R11-TIGRv4S1-000269R (Chr.11: short FT arm=5740472, long arm=5743560, direction=reverse) for TIGR FT Pseudomol ver4" XX SQ Sequence 1601 BP; 390 A; 379 C; 459 G; 373 T; 0 other; gaccagaatt ccaagcaacg aactgcgagt gattcaagaa aaaagaaaac ctgagctttc 60 gatctcttcg gagtggtttc ttgttctttg aaaaagaggg ggattaatgg cgacagccgg 120 gaaggtgatc aagtgcaaag cggcggtggc atgggaggcc gggaagccgc tgtcgatcga 180 ggaggtggag gttgcgccgc cgcaggccat ggaggtccgc gtcaagatca tctacaccgc 240 cctctgccac accgacgtct acttctggga ggccaagggg caaacacctg ttttccctag 300 gatcttgggc catgaagctg gaggcattgt ggagagtgtg ggagagggtg tgaccgaact 360 cgcgccgggc gaccatgtcc tcccggtgtt caccggcgag tgcaaggagt gtgatcactg 420 caaatcggag gagagcaaca tgtgtgacct cctcaggatc aacgtcgacc gcggcgtcat 480 gatcggcgac ggcaagtccc gattcaccat caaggggaag cccatcttcc actttgttgg 540 cacatccacc ttcagcgagt acaccgtcat ccatgtcggc tgcctcgcga agatcaaccc 600 ggaggcgcct ctcgacaagg tctgcattct cagctgcggt ttctctaccg gttttggtgc 660 aacagtgaat gtcgcgaaac cgaaaaaggg ccagaccgtg gctattttcg gtcttggagc 720 tgttggtctt gctgctatgg aaggtgccag gctgtctgga gcatcgagga tcattggtgt 780 ggacctgaac cctgcgaaat tcgaacaagc taagaagttt ggctgcactg acttcgtaaa 840 ccccaaggac cacagcaagc cagtgcacga ggtgctgatt gagatgacca acggtggact 900 cgacagggcc gttgaatgca cgggcaacat caacgccatg atatcctgct tcgaatgtgt 960 ccatgatgga tggggcgttg cggtgctggt cggcgtgccg accaaggatg atgtgttcaa 1020 gacccacccg atgaacttcc tcaacgagaa gacgctcaag gggacgttct tcggtaacta 1080 caagccgcgc accgacctgc ccaacgtcgt cgagctgtac atgaagaagg agctggagct 1140 ggagaagttc atcacgcaca gcgtgccgtt ctcggagatc aacacggcgt tcgatctcat 1200 gctcaagggg ggagagtctc cgctgcgtca tgaggatgga tgagtagaga tgatgatgat 1260 ctatctctct ctctctctct cttgcagttt cagtgcatac aagaaaccaa aaatgaaagc 1320 aaaaaaatgg atgagaagtt tgaggttttc catttaagtt taataatggt cgtgagacag 1380 ggcttgtgtg gagtcagctc tgtttactcc ctcctttcat ggcttgatct tgtttattgt 1440 cagcattgtg gcttagcaga ttttcaccag ttttaccctg taaattagta ccattctgaa 1500 atcgtaataa actactagca gtgtgaggta ctattgctgg aactgaattg attgtgcagt 1560 aaagaggtga atagcagcca gtatgaaggt tttacaattt g 1601 // |
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