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EBI DbfetchID AK101995; SV 1; linear; mRNA; STD; PLN; 1652 BP. XX AC AK101995; XX DT 19-JUL-2003 (Rel. 76, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Oryza sativa Japonica Group cDNA clone:J033079I19, full insert sequence. XX KW CAP trapper; FLI_CDNA. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-1652 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K., RA Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I., RA Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y., RA Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N., RA Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R., RA Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M., RA Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H., RA Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K., RA Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S., RA Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A., RA Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y., RA Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A., RA Yazaki J., Yokomizo S., Yoshimura A.; RT ; RL Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Department of Molecular Genetics, Head of Laboratory of Gene Expression; RL 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan XX RN [2] RA Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., RA Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., RA Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y., RA Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., RA Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., RA Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., RA Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., RA Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., RA Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., RA Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., RA Yoshino M., Hayashizaki Y.; RT "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from RT japonica Rice"; RL Science 301:376-379(2003). XX DR GOA; Q6ES10. DR UniProtKB/Swiss-Prot; Q6ES10; HAT1_ORYSJ. XX CC This clone is one of the 28K full-length cDNA clones from japonica CC rice. CC URL : http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., CC Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., CC Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., CC Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. CC and Yamamoto,M. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., CC Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., CC Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., CC Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., CC Yoshimura,A., Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences Center CC and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., CC Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., CC Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., CC Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., CC Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., CC Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., CC Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., CC Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., CC Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., CC Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..1652 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="J033079I19" FT /db_xref="taxon:39947" FT CDS 54..1454 FT /note="(RAP Annotation release2) Conserved hypothetical FT protein" FT /note="(Rice Genome Annotation Project) acetyltransferase FT type B catalytic subunit, putative, expressed" FT /note="mapping to R09-TIGRv4S1-000242F (Chr.9: short FT arm=10921425, long arm=10925900, direction=forward) for FT TIGR Pseudomol ver4" FT /db_xref="GOA:Q0J2F5" FT /db_xref="InterPro:IPR016181" FT /db_xref="InterPro:IPR017380" FT /db_xref="InterPro:IPR019467" FT /db_xref="UniProtKB/TrEMBL:Q0J2F5" FT /protein_id="BAG95329.1" FT /translation="MALKQKGTDAAADPKKRRRVGFSGIDAGVEANECMKVFIARNPDE FT AGSANSTSLQPFDLNHFFGEDGKIYGYKNLKINVWISAISFHAYADISFEETSDGGKGI FT TDLKPVLQNIFGENLVEKDEFLKTFSKECEYLSNVVTDGNVIKHDASIDEDSAVEIVRV FT ELQGAAAFLYCRLVPLILLLVEGSTPIDITEHGWEMLLVVKKSAQASSSSNFLVLGFAA FT VHHFYHYPESTRLRISQILVLPPYQGEGHGLRLLETINSISESENIYDVTIEDPSDYLQ FT YIRSSIDCLRLLTFDPIKPALCSMVSSLKDTNLSKRTSSLKMVPPSDLAETVRQKLKIN FT KKQFLRCWEILIYLNLDAEDRKSMDNFRACIYDRIKGEILGTSTGPNGKRLVQMPSNFD FT EETCFAVYWTQDGGDADDQTVEQQPEDLKTQEQQLNEVVDSQMEEIVEIAKNVTSRGKD FT KLSVSCSV" XX SQ Sequence 1652 BP; 439 A; 397 C; 393 G; 423 T; 0 other; gtccgcgcgc ctccaccacc accacctcct cctcctcccc ctccgcacca gccatggcgc 60 tcaagcagaa ggggaccgac gccgccgccg accccaagaa gcgccgccgc gtcggcttct 120 ccggcatcga tgctggcgtt gaggctaacg agtgcatgaa agtgtttatt gcaagaaacc 180 ctgacgaggc aggctcagca aatagcactt ctcttcaacc atttgaccta aatcattttt 240 ttggtgaaga tggcaagata tatggctaca aaaatttgaa gatcaatgtg tggatcagtg 300 caatatcatt tcatgcatat gctgatatct catttgagga aacatctgat ggaggaaaag 360 gaatcacaga tctcaagcct gttcttcaga atatttttgg ggaaaacttg gtagaaaaag 420 atgaatttct gaagacattt tcaaaggaat gtgaatatct cagcaatgtg gtgacagatg 480 gcaatgtcat taaacatgat gcttcaattg atgaagattc agcagttgag attgttcgag 540 ttgaactaca aggtgctgct gcttttcttt attgtcgtct ggtgccactt attctgcttt 600 tggttgaagg ttcgacgcct atagatataa ctgagcatgg atgggaaatg ctcctggtag 660 taaagaagtc agcacaggcg tcatccagct ctaactttct agtgctaggg tttgcagctg 720 ttcatcattt ttatcactac cctgagagca ctcgcctgcg gatcagccag atactggtct 780 tgccacctta tcaaggtgaa ggccatggac ttcgtcttct tgagacgatc aattctattt 840 ctgagtctga gaacatatac gatgtgacca tagaagatcc ttccgattac cttcagtaca 900 tacgttcatc cattgactgt ctccgccttc tcaccttcga tccaatcaag ccagcgctct 960 gttccatggt ctcatctctg aaggatacca acctttcgaa aaggaccagc agcttgaaaa 1020 tggttccacc ttccgacctt gctgagacgg tccgacagaa gctgaagatc aacaagaagc 1080 agttcctccg gtgctgggag attctgatct acctaaacct tgacgctgag gaccgcaaga 1140 gcatggacaa cttcagggcc tgcatctacg accgcatcaa aggcgagata cttggcactt 1200 ccactggccc caacgggaag cggctcgtcc aaatgccgag caatttcgac gaggagacat 1260 gctttgctgt gtactggaca caggacggtg gggatgcaga tgaccaaact gttgagcagc 1320 agcctgagga tctcaagacc caggagcagc agctgaatga ggtggttgac agccaaatgg 1380 aagagatcgt cgagatagcc aagaacgtca cctcacgcgg caaggataaa ctgagcgttt 1440 cttgctccgt atgacggtac gagtggtaac ttggaaaaaa ctgaatgctg cattgcagcc 1500 acagctcgcc tgatgtctct ttgtagctca agacttcagg gtagaaacta gaggctagaa 1560 aattttcagg tctgagaatt atgttctgcg tattctactt gagcttttcc gagatgaact 1620 tccttcagcg tagtaatctt agttatcatt cg 1652 // |
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