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EBI DbfetchID AK101526; SV 1; linear; mRNA; STD; PLN; 1897 BP. XX AC AK101526; XX DT 19-JUL-2003 (Rel. 76, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Oryza sativa Japonica Group cDNA clone:J033046P17, full insert sequence. XX KW CAP trapper; FLI_CDNA. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-1897 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K., RA Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I., RA Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y., RA Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N., RA Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N., RA Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H., RA Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M., RA Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K., RA Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R., RA Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M., RA Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H., RA Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K., RA Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S., RA Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A., RA Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y., RA Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A., RA Yazaki J., Yokomizo S., Yoshimura A.; RT ; RL Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, RL Department of Molecular Genetics, Head of Laboratory of Gene Expression; RL 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan XX RN [2] RA Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., RA Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., RA Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y., RA Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., RA Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., RA Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., RA Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., RA Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., RA Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., RA Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., RA Yoshino M., Hayashizaki Y.; RT "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from RT japonica Rice"; RL Science 301:376-379(2003). XX CC This clone is one of the 28K full-length cDNA clones from japonica CC rice. CC URL : http://cdna01.dna.affrc.go.jp/cDNA/ CC NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., CC Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., CC Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., CC Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. CC and Yamamoto,M. CC FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., CC Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., CC Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., CC Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., CC Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., CC Yoshimura,A., Matsubara,K. and Murakami,K. CC Genome Exploration Research Group in Riken Genomic Sciences Center CC and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., CC Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., CC Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., CC Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., CC Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., CC Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., CC Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., CC Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., CC Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., CC Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., CC Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., CC Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., CC Yasunishi,A. and Hayashizaki,Y. XX FH Key Location/Qualifiers FH FT source 1..1897 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="J033046P17" FT /db_xref="taxon:39947" FT CDS 404..1732 FT /note="(RAP Annotation release2) Similar to FT Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- FT acetylglucosaminyltransferase (EC 2.4.1.101)" FT /note="(Rice Genome Annotation Project) FT N-acetylglucosaminyltransferase I, putative, expressed" FT /note="mapping to R02-TIGRv4S1-001646R (Chr.2: short FT arm=35806732, long arm=35812308, direction=reverse) for FT TIGR Pseudomol ver4" FT /db_xref="GOA:Q6K959" FT /db_xref="InterPro:IPR004139" FT /db_xref="UniProtKB/TrEMBL:Q6K959" FT /protein_id="BAG95103.1" FT /translation="MARSPCDLRILLVAAAAAFIYIQVRLFSTQSHYADRLAQAEKSEN FT QCTSQLRSLIDQVSSQQEKIVALEEMKIRQDEERVHLKILIQDLEKRSVQTLVNNNVAP FT VAAVVVMACNRPDYLQRTVESILKYQTSVASKFPLFISQDGINGEVKKKALSYNEITYM FT QHLDLEPVRTERPGELIAYYKIAKHYKWALDELFIKHNFARVIILEDDMEIAPDFFDYF FT EAAAKLLDNDKTIMAVSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTKPTWIELSPKW FT PKAYWDDWVRLKEVHRDRQFIRPEVCRTYNFGEHGSSMGQFFRQYLEPIKLNDAHIKWN FT SEDLSYLKEDKFLIQFGKDVASATPLHGSDAALKAHNMDADVRIQYNDQEDFERIARQF FT GIFEEWKDGIPRTAYKGVVVFRYKSSRRRIYLVGPDSLSQLRV" XX SQ Sequence 1897 BP; 517 A; 489 C; 436 G; 455 T; 0 other; gaattctctc ctttctccca cgcccaaatc gcgcacttcc cctgttgagg agggaggcga 60 cgtcgcccgt ctctccgcgt cggctccggc gccgacccac tcccctcctc cgccgccatc 120 catctattcg cgccgcaccg cccgctcaac tcttccttcg cgcaggcggc ggcggtggcg 180 caggcggcgt cttcctccac ctgatccacc tccacttcct ccggaccgca caagaataag 240 aagaagaaga agtgcaggta cggtgcaggt gcagatccaa ttgcgagctc acctgctctg 300 ccctgcccac taccaagtag tagcctcctc ctcctcccct ttctccccaa catcccatcc 360 caaatcaaag gctactagac tagtgttggg ggagatccaa gagatggcgc ggagcccctg 420 cgacctccgc atcctcctcg tcgccgccgc tgcagccttc atctacatcc aagtccgcct 480 tttttctact cagtcccact acgccgaccg cctcgcacaa gcagaaaaat ccgaaaacca 540 atgcaccagt caactccgct ccttgatcga tcaagtcagc tctcagcagg agaagattgt 600 cgcgttggaa gagatgaaga tacgccaaga cgaagaacgt gtacacctca agattttaat 660 ccaagatctc gaaaaaagga gcgtgcagac cttagtaaac aacaatgtgg ctcctgttgc 720 tgctgttgtt gtaatggctt gcaatcgacc agactatttg caaaggacag ttgaatctat 780 cctgaagtat cagacatcag tggcttcaaa gtttccacta tttatatctc aggatggaat 840 aaatggagaa gtgaagaaaa aagctttgag ttataatgaa ataacatata tgcagcattt 900 agatcttgaa cctgtgcgca ctgaaaggcc aggagagttg atagcatatt acaagatagc 960 caaacattac aaatgggcct tggatgagct attcatcaaa cacaactttg cgcgagtaat 1020 aattctggaa gatgatatgg agatcgcccc tgattttttt gactacttcg aggctgcagc 1080 taaattactt gataacgata agacaatcat ggccgtttct tcctggaatg acaatggaca 1140 aaagcaattt gtttacgacc caaaagctct ttaccggtcg gatttctttc ctggacttgg 1200 atggatgtta acaaagccta catggattga gctgtcacct aagtggccca aagcttattg 1260 ggatgactgg gtgaggctaa aagaggtaca cagagaccgg caatttattc gcccggaagt 1320 ctgcagaaca tacaattttg gcgaacatgg gtcaagcatg gggcaattct tcagacagta 1380 cttggaacca atcaagctaa atgatgccca tatcaagtgg aattctgagg acctgagcta 1440 cctcaaggag gacaagttcc tgatccaatt tgggaaagac gtcgctagtg ccacccctct 1500 ccatggatct gatgccgcgt tgaaagccca caatatggat gcggatgtaa ggatccagta 1560 taacgatcag gaagactttg agcggatagc tcgtcaattt ggaatatttg aagaatggaa 1620 ggatggcatt ccaagaacag cttataaagg agtagtagtc ttccggtaca agagtagtcg 1680 aagacgaata tacctcgttg gtccggattc cctcagtcag cttagggtat agtgttgttg 1740 aggtgtggag atagtttctc attgtttcag atacaagcgg cagcacctca cctgaccact 1800 gagcagagct gacctgcctg acattttgct gtatatgtga ttcatcacgt gagattcata 1860 catagacgac ttccattgca ccgaaagctt aaacatc 1897 // |
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