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EBI Dbfetch

ID   AK100733; SV 1; linear; mRNA; STD; PLN; 1119 BP.
XX
AC   AK100733;
XX
DT   19-JUL-2003 (Rel. 76, Created)
DT   14-DEC-2008 (Rel. 98, Last updated, Version 4)
XX
DE   Oryza sativa Japonica Group cDNA clone:J023117O12, full insert sequence.
XX
KW   CAP trapper; FLI_CDNA.
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OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
XX
RN   [1]
RP   1-1119
RA   Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K.,
RA   Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K.,
RA   Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I.,
RA   Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y.,
RA   Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N.,
RA   Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N.,
RA   Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H.,
RA   Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M.,
RA   Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K.,
RA   Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R.,
RA   Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M.,
RA   Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H.,
RA   Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K.,
RA   Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S.,
RA   Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A.,
RA   Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y.,
RA   Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A.,
RA   Yazaki J., Yokomizo S., Yoshimura A.;
RT   ;
RL   Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences,
RL   Department of Molecular Genetics, Head of Laboratory of Gene Expression;
RL   2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
XX
RN   [2]
RA   Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N.,
RA   Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T.,
RA   Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y.,
RA   Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y.,
RA   Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M.,
RA   Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R.,
RA   Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M.,
RA   Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K.,
RA   Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K.,
RA   Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N.,
RA   Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T.,
RA   Yoshino M., Hayashizaki Y.;
RT   "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from
RT   japonica Rice";
RL   Science 301:376-379(2003).
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CC   This clone is one of the 28K full-length cDNA clones from japonica
CC   rice.
CC   URL : http://cdna01.dna.affrc.go.jp/cDNA/
CC   NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
CC   Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
CC   Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
CC   Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
CC   and Yamamoto,M.
CC   FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
CC   Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
CC   Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
CC   Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
CC   Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
CC   Yoshimura,A., Matsubara,K. and Murakami,K.
CC   Genome Exploration Research Group in Riken Genomic Sciences Center
CC   and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
CC   Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
CC   Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
CC   Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
CC   Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
CC   Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
CC   Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
CC   Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
CC   Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
CC   Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
CC   Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
CC   Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
CC   Yasunishi,A. and Hayashizaki,Y.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1119
FT                   /organism="Oryza sativa Japonica Group"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="mRNA"
FT                   /clone="J023117O12"
FT                   /db_xref="taxon:39947"
FT   CDS             150..950
FT                   /note="(RAP Annotation release2) Protein of unknown
FT                   function DUF303, acetylesterase putative domain containing
FT                   protein"
FT                   /note="(Rice Genome Annotation Project) receptor protein
FT                   kinase-like protein, putative, expressed"
FT                   /note="mapping to R03-TIGRv4S1-001833F (Chr.3: short
FT                   arm=36128252, long arm=36129368, direction=forward) for
FT                   TIGR Pseudomol ver4"
FT                   /db_xref="InterPro:IPR005181"
FT                   /db_xref="UniProtKB/TrEMBL:Q84M79"
FT                   /protein_id="BAG94746.1"
FT                   /translation="MASPQLQLQVLALLLLLATTATATATPTPTLIFLLGGQSNMGGRG
FT                   GATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNVLGVGPGMSFAHAL
FT                   FRAIPPSTVIGLVPCAQGGTPIANWTRGTELYERMVGRGRAAMATAGAGAGARMGALLW
FT                   YQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQGKFVEPVREAQK
FT                   AVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLSTL"
XX
SQ   Sequence 1119 BP; 195 A; 361 C; 348 G; 215 T; 0 other;
     ggcctgccta cctgtcctgt ccgtccacct tgctgtgtta aatgcgtttc tagcgtagcg        60
     tagcagatcc aacaaacacc tagcagcagc agcattggta cgtactcctc ctagtcctag       120
     ctagtgagtg agcgtgagga gcagtgagca tggcgtcgcc acagctacag ctgcaggtac       180
     tagcgctgct gctgctgctc gccaccacgg ccacggccac ggcgacgccg acgccgacgc       240
     tgatattcct tttgggcggg cagtccaaca tgggcggtcg cggcggcgcc accaacgggc       300
     cgtgggacgg cgtggtgccg ccggagtgcg ccccgtcacc tcgcatcctc cggttgtccc       360
     ctgagctccg gtgggaggaa gcgcgggagc ccctccacgc cggcatcgac gtccacaacg       420
     tgctcggcgt gggcccgggg atgtccttcg cccacgccct cttccgcgcc atcccgccct       480
     ccaccgtcat cggcctcgtc ccctgcgccc agggaggcac gcccatcgcc aactggacca       540
     ggggcacgga gctgtacgag cggatggtgg ggcgcggcag ggcggccatg gccaccgccg       600
     gtgcaggtgc aggggccagg atgggggcgc tgctgtggta ccagggggag gcggacacca       660
     tccggcggga ggacgcggag gtgtacgccc ggaagatgga gggcatggtg cgcgacgtcc       720
     ggcgagacct ggcgttgccg gagctgctgg tgatccaggt ggggatcgcg acggggcagg       780
     gcaagttcgt cgagcccgtc agggaggccc agaaggcggt caggcttcct tttctcaagt       840
     acgtcgacgc caagggcctc cccatcgcca acgactacac gcacctcacc accccggcgc       900
     aggtcaagct cggcaaattg ctagccaagg cctacctatc cacgctctaa ttatatcatt       960
     tgcgttcact gctggctact aagtactgat tcattcctca ccttcccctc tatgcaaaat      1020
     ctgtcatatg gagcgcgtgc tgtatgtagg ggatgagtat cttaccactt cttccttcat      1080
     tccggattaa aatataatgt tactgatttt ctttttccc                             1119
//


  
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