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EBI DbfetchID AK075665; SV 1; linear; mRNA; HTC; MUS; 1104 BP. XX AC AK075665; XX DT 18-DEC-2002 (Rel. 74, Created) DT 07-OCT-2008 (Rel. 97, Last updated, Version 15) XX DE Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched DE library, clone:1110056B09 product:weakly similar to DUAL SPECIFICITY DE PROTEIN PHOSPHATASE 13 (EC 3.1.3.48) (EC 3.1.3.16) (TESTIS- AND DE SKELETAL-MUSCLE-SPECIFIC DSP) [Homo sapiens], full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-1104 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., RA Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., RA Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., RA Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., RA Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., RA Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., RA Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., RA Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., RA Hayashizaki Y.; RT ; RL Submitted (16-APR-2002) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX DOI; 10.1126/science.1112014 RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The transcriptional landscape of the mammalian genome."; RL Science 309(5740):1559-1563(2005). XX RN [3] RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309:1564-1566(2005). XX RN [4] RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420:563-573(2002). XX RN [5] RX DOI; 10.1038/35055500 RX PUBMED; 11217851. RA RIKEN FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9 RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100 RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600 RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR ASTD; TRAN00000130467. DR Ensembl-Gn; ENSMUSG00000063821; Mus_musculus. DR Ensembl-Tr; ENSMUST00000073870; Mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ XX FH Key Location/Qualifiers FH FT source 1..1104 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /dev_stage="18-day embryo" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="1110056B09" FT /tissue_type="whole body" FT /db_xref="taxon:10090" FT CDS 98..745 FT /codon_start=1 FT /transl_table=1 FT /note="putative" FT /note="weakly similar to DUAL SPECIFICITY PROTEIN FT PHOSPHATASE 13 (EC 3.1.3.48) (EC 3.1.3.16) (TESTIS- AND FT SKELETAL-MUSCLE-SPECIFIC DSP) [Homo sapiens] FT (SWISSPROT|Q9UII6, evidence: FASTY, 50.9%ID, 88.3%length, FT match=522)" FT /db_xref="GOA:Q8BK84" FT /db_xref="HSSP:1VHR" FT /db_xref="InterPro:IPR016130" FT /db_xref="MGI:3647127" FT /db_xref="UniProtKB/Swiss-Prot:Q8BK84" FT /protein_id="BAC35883.1" FT /translation="MASGDTKTSVKHAHLCAERLSVREEEGDAEDYCTPGAFELERLFW FT KGSPQYTHVNEVWPRLHIGDEATALDRYGLQKAGFTHVLNAAHGRWNVDTGPDYYRDMA FT IEYHGVEADDVPTFDLSIFFYSAAAFIDSALRDDHSKILVHCAMGRSRSATLVLAYLMI FT HKNMTLVDAIQQVAKNRCVLPNRGFLKQLRELDKQLVKQRRQAGPGDSDLGL" XX SQ Sequence 1104 BP; 255 A; 287 C; 333 G; 229 T; 0 other; gagtgtaagg ctgccacaca cccttcggac tggtacctct tagcccagcc aggcacttgg 60 ggcacacaga aaggaaagaa cctcccttgg ctccaaaatg gcatcaggag atacaaagac 120 aagcgtcaaa catgcccacc tctgtgctga gaggctgtcc gtgcgggagg aggagggaga 180 tgctgaggac tactgtaccc ctggagcctt cgagctggag cgtctcttct ggaagggcag 240 tccccagtat acacacgtca atgaggtctg gcctcggctc cacattggtg atgaggccac 300 ggcgctggac cgctatgggc tgcagaaggc gggtttcacg cacgtgctga acgcggcgca 360 cggccgctgg aatgtggaca ccgggccgga ctactaccga gacatggcca tcgagtacca 420 cggcgtcgag gccgacgacg tgcccacctt cgacctcagc atctttttct actccgctgc 480 ggccttcatc gactcggcac tccgagatga ccacagtaag atcctggttc actgtgccat 540 gggccgaagt cggtcagcaa ctctggtcct ggcctacctg atgatccaca agaacatgac 600 tttggtggac gccattcaac aagtggctaa gaaccgctgt gtcctgccca accggggctt 660 cttgaagcaa ctccgagagc tggacaagca gctggtgaag cagcggcgac aggccgggcc 720 aggggacagt gacctagggc tgtagggggc ctcctcagag aggatcagag accctggcac 780 ccagagcaga aggctgaagc acgtctgcaa ggaggctttg gtgggcaggg agatgagaca 840 gtgaaaccaa aggctgggcg cagcagggag gatgcccgct gtctcctcca gtctagttct 900 ttgcctcatg gtaggccaag tcagctgcag ggggatctgg gtaaggaaaa ggtaccgctc 960 tccacaatct cctgtcttta agttggaagc aaaaaaaggt ttcctttgtt tgggctgttt 1020 tttgttttgt tttaatgtgt gggtactgtg ttgtgattaa atgcttggct ctgaaaggga 1080 aaaatcatgt tattataaaa agat 1104 // |
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