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EBI Dbfetch

ID   AK061073; SV 1; linear; mRNA; STD; PLN; 1106 BP.
XX
AC   AK061073;
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DT   19-JUL-2003 (Rel. 76, Created)
DT   14-DEC-2008 (Rel. 98, Last updated, Version 4)
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DE   Oryza sativa Japonica Group cDNA clone:006-206-D05, full insert sequence.
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KW   FLI_CDNA; oligo-capping.
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OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
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RN   [1]
RP   1-1106
RA   Adachi J., Aizawa K., Akimura T., Arakawa T., Carninci P., Doi K.,
RA   Fujimura T., Fukuda S., Hanagaki T., Hara A., Hashizume W., Hayashida K.,
RA   Hayashizaki Y., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Hotta I.,
RA   Iida J., Iida Y., Ikeda R., Imamura K., Imotani K., Ishibiki J., Ishii Y.,
RA   Ishikawa M., Itoh M., Kagawa I., Kanagawa S., Katoh H., Kawagashira N.,
RA   Kawai J., Kawamata M., Kikuchi S., Kishikawa-Hirozane T., Kishimoto N.,
RA   Kobayashi M., Kodama T., Kojima K., Kojima Y., Kondo S., Konno H.,
RA   Kouda M., Koya S., Kurihara C., Kurosaki T., Kusumegi T., Li C., Lu M.,
RA   Masuda H., Matsubara K., Matsuyama T., Miura J., Miyazaki A., Mizuno K.,
RA   Murakami K., Murata M., Nagata T., Nakamura M., Namiki T., Narikawa R.,
RA   Niikura J., Nishi K., Nomura K., Numasaki R., Ohneda E., Ohno M.,
RA   Ohtsuki K., Oka M., Ooka H., Osato N., Ota Y., Otomo Y., Ryu R., Saitoh H.,
RA   Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Sato K., Satoh K.,
RA   Shibata K., Shinagawa A., Shiraki T., Shishiki T., Sogabe Y., Sugano S.,
RA   Sugiyama A., Suzuki K., Suzuki Y., Tagami M., Tagami-Takeda Y., Tagawa A.,
RA   Takahashi F., Takaku-Akahira S., Tanaka T., Tomaru A., Toya T., Tsunoda Y.,
RA   Ueda M., Waki K., Xie Q., Yahagi W., Yamada H., Yamamoto M., Yasunishi A.,
RA   Yazaki J., Yokomizo S., Yoshimura A.;
RT   ;
RL   Submitted (05-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences,
RL   Department of Molecular Genetics, Head of Laboratory of Gene Expression;
RL   2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
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RN   [2]
RA   Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N.,
RA   Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T.,
RA   Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K., Shishiki T., Otomo Y.,
RA   Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y.,
RA   Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M.,
RA   Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R.,
RA   Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M.,
RA   Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K.,
RA   Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K.,
RA   Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N.,
RA   Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T.,
RA   Yoshino M., Hayashizaki Y.;
RT   "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from
RT   japonica Rice";
RL   Science 301:376-379(2003).
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CC   This clone is one of the 28K full-length cDNA clones from japonica
CC   rice.
CC   URL : http://cdna01.dna.affrc.go.jp/cDNA/
CC   NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
CC   Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
CC   Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
CC   Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
CC   and Yamamoto,M.
CC   FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
CC   Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
CC   Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
CC   Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
CC   Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
CC   Yoshimura,A., Matsubara,K. and Murakami,K.
CC   Genome Exploration Research Group in Riken Genomic Sciences Center
CC   and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
CC   Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
CC   Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
CC   Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
CC   Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
CC   Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
CC   Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
CC   Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
CC   Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
CC   Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
CC   Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
CC   Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
CC   Yasunishi,A. and Hayashizaki,Y.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1106
FT                   /organism="Oryza sativa Japonica Group"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="mRNA"
FT                   /clone="006-206-D05"
FT                   /db_xref="taxon:39947"
FT   CDS             151..951
FT                   /note="(Rice Genome Annotation Project) receptor protein
FT                   kinase-like protein, putative, expressed"
FT                   /note="mapping to R03-TIGRv4S1-001833F (Chr.3: short
FT                   arm=36128248, long arm=36129356, direction=forward) for
FT                   TIGR Pseudomol ver4"
FT                   /db_xref="InterPro:IPR005181"
FT                   /db_xref="UniProtKB/TrEMBL:Q84M79"
FT                   /protein_id="BAG87711.1"
FT                   /translation="MASPQLQLQVLALLLLLATTATATATPTPTLIFLLGGQSNMGGRG
FT                   GATNGPWDGVVPPECAPSPRILRLSPELRWEEAREPLHAGIDVHNVLGVGPGMSFAHAL
FT                   FRAIPPSTVIGLVPCAQGGTPIANWTRGTELYERMVGRGRAAMATAGAGAGARMGALLW
FT                   YQGEADTIRREDAEVYARKMEGMVRDVRRDLALPELLVIQVGIATGQGKFVEPVREAQK
FT                   AVRLPFLKYVDAKGLPIANDYTHLTTPAQVKLGKLLAKAYLSTL"
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SQ   Sequence 1106 BP; 193 A; 359 C; 347 G; 207 T; 0 other;
     ctgcctgcct acctgtcctg tccgtccacc ttgctgtgtt aaatgcgttt ctagcgtagc        60
     gtagcagatc caacaaacac ctagcagcag cagcattggt acgtactcct cctagtccta       120
     gctagtgagt gagcgtgagg agcagtgagc atggcgtcgc cacagctaca gctgcaggta       180
     ctagcgctgc tgctgctgct cgccaccacg gccacggcca cggcgacgcc gacgccgacg       240
     ctgatattcc ttttgggcgg gcagtccaac atgggcggtc gcggcggcgc caccaacggg       300
     ccgtgggacg gcgtggtgcc gccggagtgc gccccgtcac ctcgcatcct ccggttgtcc       360
     cctgagctcc ggtgggagga agcgcgggag cccctccacg ccggcatcga cgtccacaac       420
     gtgctcggcg tgggcccggg gatgtccttc gcccacgccc tcttccgcgc catcccgccc       480
     tccaccgtca tcggcctcgt cccctgcgcc cagggaggca cgcccatcgc caactggacc       540
     aggggcacgg agctgtacga gcggatggtg gggcgcggca gggcggccat ggccaccgcc       600
     ggtgcaggtg caggggccag gatgggggcg ctgctgtggt accaggggga ggcggacacc       660
     atccggcggg aggacgcgga ggtgtacgcc cggaagatgg agggcatggt gcgcgacgtc       720
     cggcgagacc tggcgttgcc ggagctgctg gtgatccagg tggggatcgc gacggggcag       780
     ggcaagttcg tcgagcccgt cagggaggcc cagaaggcgg tcaggcttcc ttttctcaag       840
     tacgtcgacg ccaagggcct ccccatcgcc aacgactaca cgcacctcac caccccggcg       900
     caggtcaagc tcggcaaatt gctagccaag gcctacctat ccacgctcta attatatcat       960
     ttgcgttcac tgctggctac taagtactga ttcattcctc cccttcccct ctatgcaaaa      1020
     tctgtcatat ggagcgcgtg ctgtatgtag gggatgagta tcttaccact tcttccttca      1080
     ttccggatta aaatataatg ttactg                                           1106
//


  
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